Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039503.01.T01 | XP_039688731.1 | 62.973 | 370 | 106 | 5 | 1 | 362 | 1 | 347 | 1.66E-149 | 436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039503.01.T01 | A0A6D2I977 | 59.551 | 356 | 112 | 6 | 1 | 345 | 1 | 335 | 2.68e-135 | 398 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0380014122.01 | MsG0780039503.01 | 0.818855 | 1.576281e-52 | 1.193650e-49 |
| MsG0480021775.01 | MsG0780039503.01 | 0.850087 | 2.129825e-60 | 4.124499e-57 |
| MsG0480022862.01 | MsG0780039503.01 | 0.804265 | 2.347299e-49 | 1.204869e-46 |
| MsG0580024918.01 | MsG0780039503.01 | 0.804687 | 1.917057e-49 | 9.948097e-47 |
| MsG0580025201.01 | MsG0780039503.01 | 0.806424 | 8.280161e-50 | 4.492684e-47 |
| MsG0580027617.01 | MsG0780039503.01 | 0.803871 | 2.834490e-49 | 1.440396e-46 |
| MsG0280006510.01 | MsG0780039503.01 | 0.815969 | 7.038457e-52 | 4.923844e-49 |
| MsG0280009868.01 | MsG0780039503.01 | 0.803659 | 3.136979e-49 | 1.585329e-46 |
| MsG0280010102.01 | MsG0780039503.01 | 0.974607 | 1.869688e-138 | 2.620753e-132 |
| MsG0780036201.01 | MsG0780039503.01 | 0.803892 | 2.806002e-49 | 1.426722e-46 |
| MsG0780038597.01 | MsG0780039503.01 | 0.806200 | 9.232337e-50 | 4.980919e-47 |
| MsG0780039503.01 | MsG0780039544.01 | 0.980322 | 5.949943e-150 | 1.409385e-143 |
| MsG0780039503.01 | MsG0780039592.01 | 0.964282 | 3.941258e-123 | 2.305831e-117 |
| MsG0780039503.01 | MsG0780040186.01 | 0.841247 | 5.333192e-58 | 7.789192e-55 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039503.01.T01 | MTR_7g062720 | 64.394 | 132 | 47 | 0 | 1 | 132 | 1 | 132 | 2.45e-57 | 184 |
| MsG0780039503.01.T01 | MTR_5g061150 | 62.205 | 127 | 48 | 0 | 20 | 146 | 10 | 136 | 8.11e-48 | 159 |
| MsG0780039503.01.T01 | MTR_4g037355 | 55.714 | 140 | 37 | 4 | 151 | 289 | 1 | 116 | 4.31e-41 | 141 |
| MsG0780039503.01.T01 | MTR_4g112730 | 69.863 | 73 | 20 | 1 | 138 | 210 | 1 | 71 | 1.04e-26 | 102 |
| MsG0780039503.01.T01 | MTR_1g036690 | 58.537 | 82 | 27 | 3 | 282 | 362 | 5 | 80 | 1.14e-22 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 66 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAGGCTCTTAATATTTC+TGG | 0.080746 | 7:+65002996 | MsG0780039503.01.T01:CDS |
| TTCGGCATTTAAATGAATTT+TGG | 0.166319 | 7:-65003048 | None:intergenic |
| CACTTCAAAATAAGGATAAA+AGG | 0.234592 | 7:+65003897 | MsG0780039503.01.T01:CDS |
| CCAACAATCACTTCAAAATA+AGG | 0.244294 | 7:+65003889 | MsG0780039503.01.T01:CDS |
| TATGGAAGGGGACGTGGTTT+TGG | 0.259444 | 7:+65003662 | MsG0780039503.01.T01:CDS |
| TGCGTTGCTACATTCACTTC+TGG | 0.264941 | 7:-65003560 | None:intergenic |
| TAGAAGATCCAAAAGATCTT+TGG | 0.269782 | 7:+65003186 | MsG0780039503.01.T01:CDS |
| TATTTCTGGAAATAATTATC+TGG | 0.282933 | 7:+65003010 | MsG0780039503.01.T01:CDS |
| ATGGTTGTATTTGCGTTTAC+AGG | 0.299146 | 7:+65003271 | MsG0780039503.01.T01:CDS |
| TATAGGTGGGGTTCTATTCC+TGG | 0.331534 | 7:-65004051 | None:intergenic |
| TAAAGATCAACAAGATGTTT+TGG | 0.333763 | 7:-65003866 | None:intergenic |
| TGAAGATGATTATGGTAATA+TGG | 0.338642 | 7:+65003949 | MsG0780039503.01.T01:CDS |
| CTGGAAATAATTATCTGGCT+TGG | 0.347827 | 7:+65003015 | MsG0780039503.01.T01:CDS |
| TGGAAATAATTATCTGGCTT+GGG | 0.361577 | 7:+65003016 | MsG0780039503.01.T01:CDS |
| CGTGGACGTGGTCGTGGTTA+TGG | 0.362984 | 7:+65003644 | MsG0780039503.01.T01:CDS |
| TTTGGGAAAATTTAAAAGAA+AGG | 0.385472 | 7:+65003204 | MsG0780039503.01.T01:CDS |
| AACCATTCGTTACGAGCATT+AGG | 0.390171 | 7:-65003254 | None:intergenic |
| AGAAGATCCAAAAGATCTTT+GGG | 0.393236 | 7:+65003187 | MsG0780039503.01.T01:CDS |
| GAAAATGATGAAGATGATTA+TGG | 0.394855 | 7:+65003941 | MsG0780039503.01.T01:CDS |
| CGTGGTCGTGGCCATGGTTA+TGG | 0.406960 | 7:+65003608 | MsG0780039503.01.T01:CDS |
| TGCTATCGTTGTGGAGGAAA+AGG | 0.414829 | 7:+65003818 | MsG0780039503.01.T01:CDS |
| CGTGGTTATGGAAGGGGACG+TGG | 0.429618 | 7:+65003656 | MsG0780039503.01.T01:CDS |
| GCGTTGCTACATTCACTTCT+GGG | 0.431019 | 7:-65003559 | None:intergenic |
| CCTTCGTCACCACCTTCATA+AGG | 0.433246 | 7:+65003139 | MsG0780039503.01.T01:CDS |
| CAAACTCGTGGTCGTGGTCG+TGG | 0.459890 | 7:+65003596 | MsG0780039503.01.T01:CDS |
| AGAAATCAGCAGCATCTAAG+TGG | 0.464577 | 7:-65003979 | None:intergenic |
| AGTAACAACTGAACAACAAA+AGG | 0.468873 | 7:+65003100 | MsG0780039503.01.T01:CDS |
| AATGGTATCTCCATGCCCTT+CGG | 0.470113 | 7:-65003066 | None:intergenic |
| AATGTTGTAAAGAATGATAT+TGG | 0.471241 | 7:+65003767 | MsG0780039503.01.T01:CDS |
| CGTGGTCGTGGTCGTGGCCA+TGG | 0.475975 | 7:+65003602 | MsG0780039503.01.T01:CDS |
| ATTGACACTGTGTGGAGAAA+AGG | 0.483584 | 7:+65003346 | MsG0780039503.01.T01:CDS |
| GTAGCAACGCATGATCACTA+TGG | 0.484635 | 7:+65003572 | MsG0780039503.01.T01:CDS |
| GCAGCAACAATACCGCGAAA+AGG | 0.486558 | 7:+65003430 | MsG0780039503.01.T01:CDS |
| ACTTCAAAATAAGGATAAAA+GGG | 0.487291 | 7:+65003898 | MsG0780039503.01.T01:CDS |
| GCTACATTCACTTCTGGGAA+TGG | 0.488554 | 7:-65003554 | None:intergenic |
| TACATTAGATGCATGAAAAG+TGG | 0.490606 | 7:-65003402 | None:intergenic |
| CAGCAACAATACCGCGAAAA+GGG | 0.491478 | 7:+65003431 | MsG0780039503.01.T01:CDS |
| CATTTAAATGCCGAAGGGCA+TGG | 0.494088 | 7:+65003056 | MsG0780039503.01.T01:CDS |
| GACGTGGTCGTGGTTATGGA+AGG | 0.501950 | 7:+65003648 | MsG0780039503.01.T01:CDS |
| GTTGTGGAGGAAAAGGTCAT+TGG | 0.504176 | 7:+65003825 | MsG0780039503.01.T01:CDS |
| TATGGACAAACTCGTGGTCG+TGG | 0.513531 | 7:+65003590 | MsG0780039503.01.T01:CDS |
| CATGGAGATACCATTAAAGA+AGG | 0.521442 | 7:+65003074 | MsG0780039503.01.T01:CDS |
| CGTGGACGTGGACGTGGTCG+TGG | 0.524981 | 7:+65003638 | MsG0780039503.01.T01:CDS |
| CATTAGAGATGAAAATATCC+AGG | 0.532865 | 7:+65004033 | MsG0780039503.01.T01:CDS |
| AAAATTCATTTAAATGCCGA+AGG | 0.537172 | 7:+65003050 | MsG0780039503.01.T01:CDS |
| CATGGTTATGGTCGTGGACG+TGG | 0.538890 | 7:+65003620 | MsG0780039503.01.T01:CDS |
| CGTGGCCATGGTTATGGTCG+TGG | 0.540024 | 7:+65003614 | MsG0780039503.01.T01:CDS |
| CGTGGACGTGGACGTGGACG+TGG | 0.546682 | 7:+65003632 | MsG0780039503.01.T01:CDS |
| CGTGGTCGTGGTTATGGAAG+GGG | 0.551769 | 7:+65003650 | MsG0780039503.01.T01:CDS |
| TATGGTCGTGGACGTGGACG+TGG | 0.556253 | 7:+65003626 | MsG0780039503.01.T01:CDS |
| TTCCTAATGCTCGTAACGAA+TGG | 0.575736 | 7:+65003252 | MsG0780039503.01.T01:CDS |
| AACTGAACAACAAAAGGCTA+AGG | 0.582581 | 7:+65003106 | MsG0780039503.01.T01:CDS |
| GAGAGTATTTGCTATCGTTG+TGG | 0.583351 | 7:+65003809 | MsG0780039503.01.T01:CDS |
| ATTCGTTACGAGCATTAGGA+AGG | 0.589689 | 7:-65003250 | None:intergenic |
| CCTTATGAAGGTGGTGACGA+AGG | 0.598722 | 7:-65003139 | None:intergenic |
| ACGTGGTCGTGGTTATGGAA+GGG | 0.598966 | 7:+65003649 | MsG0780039503.01.T01:CDS |
| AGTATTTGCTATCGTTGTGG+AGG | 0.599695 | 7:+65003812 | MsG0780039503.01.T01:CDS |
| AATCACACGACTCGTCCCAC+TGG | 0.600994 | 7:+65003524 | MsG0780039503.01.T01:CDS |
| GAAATCAGCAGCATCTAAGT+GGG | 0.621669 | 7:-65003978 | None:intergenic |
| AAATTCATTTAAATGCCGAA+GGG | 0.631745 | 7:+65003051 | MsG0780039503.01.T01:CDS |
| CACGTCCACGACCATAACCA+TGG | 0.649591 | 7:-65003619 | None:intergenic |
| GTGGTGACGAAGGAATATCA+TGG | 0.663314 | 7:-65003129 | None:intergenic |
| ACTTCTCTATTGACACTGTG+TGG | 0.668278 | 7:+65003338 | MsG0780039503.01.T01:CDS |
| TGGGAATGGAGCACTACCAG+TGG | 0.672955 | 7:-65003540 | None:intergenic |
| GGGAATGGAGCACTACCAGT+GGG | 0.676344 | 7:-65003539 | None:intergenic |
| GATCACTATGGACAAACTCG+TGG | 0.716183 | 7:+65003584 | MsG0780039503.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTTGTAAAGAATGATAT+TGG | + | Chr7:65003767-65003786 | MsG0780039503.01.T01:CDS | 20.0% |
| !! | ACTTCAAAATAAGGATAAAA+GGG | + | Chr7:65003898-65003917 | MsG0780039503.01.T01:CDS | 20.0% |
| !! | TTTGGGAAAATTTAAAAGAA+AGG | + | Chr7:65003204-65003223 | MsG0780039503.01.T01:CDS | 20.0% |
| !!! | TATTTCTGGAAATAATTATC+TGG | + | Chr7:65003010-65003029 | MsG0780039503.01.T01:CDS | 20.0% |
| ! | AAAATTCATTTAAATGCCGA+AGG | + | Chr7:65003050-65003069 | MsG0780039503.01.T01:CDS | 25.0% |
| ! | AAATTCATTTAAATGCCGAA+GGG | + | Chr7:65003051-65003070 | MsG0780039503.01.T01:CDS | 25.0% |
| ! | CACTTCAAAATAAGGATAAA+AGG | + | Chr7:65003897-65003916 | MsG0780039503.01.T01:CDS | 25.0% |
| ! | GAAAATGATGAAGATGATTA+TGG | + | Chr7:65003941-65003960 | MsG0780039503.01.T01:CDS | 25.0% |
| ! | TGAAGATGATTATGGTAATA+TGG | + | Chr7:65003949-65003968 | MsG0780039503.01.T01:CDS | 25.0% |
| !! | AAATTTTCCCAAAGATCTTT+TGG | - | Chr7:65003197-65003216 | None:intergenic | 25.0% |
| !! | ATCATTTTCACATGCAAAAT+GGG | - | Chr7:65003930-65003949 | None:intergenic | 25.0% |
| !! | TAAAGATCAACAAGATGTTT+TGG | - | Chr7:65003869-65003888 | None:intergenic | 25.0% |
| !! | TTACAACATTTTTCATCTTC+TGG | - | Chr7:65003757-65003776 | None:intergenic | 25.0% |
| !! | TTCGGCATTTAAATGAATTT+TGG | - | Chr7:65003051-65003070 | None:intergenic | 25.0% |
| !!! | CATTTTTTAGATCCTTATGA+AGG | - | Chr7:65003154-65003173 | None:intergenic | 25.0% |
| !!! | GAGAAAATGTGTTTTTGTTT+TGG | - | Chr7:65003733-65003752 | None:intergenic | 25.0% |
| !!! | TAAATGAATTTTGGCATCAA+GGG | - | Chr7:65003042-65003061 | None:intergenic | 25.0% |
| !!! | TGTTACTTTTCCTTCTTTAA+TGG | - | Chr7:65003087-65003106 | None:intergenic | 25.0% |
| !!! | TTAAATGAATTTTGGCATCA+AGG | - | Chr7:65003043-65003062 | None:intergenic | 25.0% |
| AGAAGATCCAAAAGATCTTT+GGG | + | Chr7:65003187-65003206 | MsG0780039503.01.T01:CDS | 30.0% | |
| AGTAACAACTGAACAACAAA+AGG | + | Chr7:65003100-65003119 | MsG0780039503.01.T01:CDS | 30.0% | |
| CATTAGAGATGAAAATATCC+AGG | + | Chr7:65004033-65004052 | MsG0780039503.01.T01:CDS | 30.0% | |
| CCAACAATCACTTCAAAATA+AGG | + | Chr7:65003889-65003908 | MsG0780039503.01.T01:CDS | 30.0% | |
| TACATTAGATGCATGAAAAG+TGG | - | Chr7:65003405-65003424 | None:intergenic | 30.0% | |
| TAGAAGATCCAAAAGATCTT+TGG | + | Chr7:65003186-65003205 | MsG0780039503.01.T01:CDS | 30.0% | |
| ! | AAGATCTTTTGGATCTTCTA+TGG | - | Chr7:65003186-65003205 | None:intergenic | 30.0% |
| ! | AGATGATCAATCTTTTCATC+AGG | - | Chr7:65004013-65004032 | None:intergenic | 30.0% |
| ! | CATCATTTTCACATGCAAAA+TGG | - | Chr7:65003931-65003950 | None:intergenic | 30.0% |
| ! | TGGAAATAATTATCTGGCTT+GGG | + | Chr7:65003016-65003035 | MsG0780039503.01.T01:CDS | 30.0% |
| ! | TTTGAGGCTCTTAATATTTC+TGG | + | Chr7:65002996-65003015 | MsG0780039503.01.T01:CDS | 30.0% |
| ! | TTTTTAGATCCTTATGAAGG+TGG | - | Chr7:65003151-65003170 | None:intergenic | 30.0% |
| !! | GGTTTTAATCGTAATCACAA+TGG | + | Chr7:65003683-65003702 | MsG0780039503.01.T01:CDS | 30.0% |
| !!! | CCTTATTTTGAAGTGATTGT+TGG | - | Chr7:65003892-65003911 | None:intergenic | 30.0% |
| AACTGAACAACAAAAGGCTA+AGG | + | Chr7:65003106-65003125 | MsG0780039503.01.T01:CDS | 35.0% | |
| ATGGTTGTATTTGCGTTTAC+AGG | + | Chr7:65003271-65003290 | MsG0780039503.01.T01:CDS | 35.0% | |
| CATGGAGATACCATTAAAGA+AGG | + | Chr7:65003074-65003093 | MsG0780039503.01.T01:CDS | 35.0% | |
| CTGGAAATAATTATCTGGCT+TGG | + | Chr7:65003015-65003034 | MsG0780039503.01.T01:CDS | 35.0% | |
| ! | CCTCAAAATCAAGTTTTGCA+AGG | - | Chr7:65002983-65003002 | None:intergenic | 35.0% |
| ! | CCTTGCAAAACTTGATTTTG+AGG | + | Chr7:65002980-65002999 | MsG0780039503.01.T01:CDS | 35.0% |
| ! | CTTTTGGATCTTCTATGGTA+AGG | - | Chr7:65003181-65003200 | None:intergenic | 35.0% |
| !!! | ACCTTTTAAAACCCTTTTCG+CGG | - | Chr7:65003445-65003464 | None:intergenic | 35.0% |
| AACCATTCGTTACGAGCATT+AGG | - | Chr7:65003257-65003276 | None:intergenic | 40.0% | |
| ACTTCTCTATTGACACTGTG+TGG | + | Chr7:65003338-65003357 | MsG0780039503.01.T01:CDS | 40.0% | |
| AGAAATCAGCAGCATCTAAG+TGG | - | Chr7:65003982-65004001 | None:intergenic | 40.0% | |
| ATTCGTTACGAGCATTAGGA+AGG | - | Chr7:65003253-65003272 | None:intergenic | 40.0% | |
| ATTGACACTGTGTGGAGAAA+AGG | + | Chr7:65003346-65003365 | MsG0780039503.01.T01:CDS | 40.0% | |
| GAAATCAGCAGCATCTAAGT+GGG | - | Chr7:65003981-65004000 | None:intergenic | 40.0% | |
| TTCCTAATGCTCGTAACGAA+TGG | + | Chr7:65003252-65003271 | MsG0780039503.01.T01:CDS | 40.0% | |
| ! | GAAGGATGACAGTTTTCTGA+TGG | - | Chr7:65003235-65003254 | None:intergenic | 40.0% |
| !! | AGTATTTGCTATCGTTGTGG+AGG | + | Chr7:65003812-65003831 | MsG0780039503.01.T01:CDS | 40.0% |
| !! | GAGAGTATTTGCTATCGTTG+TGG | + | Chr7:65003809-65003828 | MsG0780039503.01.T01:CDS | 40.0% |
| !!! | ACCGCGAAAAGGGTTTTAAA+AGG | + | Chr7:65003441-65003460 | MsG0780039503.01.T01:CDS | 40.0% |
| AATGGTATCTCCATGCCCTT+CGG | - | Chr7:65003069-65003088 | None:intergenic | 45.0% | |
| CAGCAACAATACCGCGAAAA+GGG | + | Chr7:65003431-65003450 | MsG0780039503.01.T01:CDS | 45.0% | |
| CATTTAAATGCCGAAGGGCA+TGG | + | Chr7:65003056-65003075 | MsG0780039503.01.T01:CDS | 45.0% | |
| GATCACTATGGACAAACTCG+TGG | + | Chr7:65003584-65003603 | MsG0780039503.01.T01:CDS | 45.0% | |
| GCGTTGCTACATTCACTTCT+GGG | - | Chr7:65003562-65003581 | None:intergenic | 45.0% | |
| GTAGCAACGCATGATCACTA+TGG | + | Chr7:65003572-65003591 | MsG0780039503.01.T01:CDS | 45.0% | |
| GTTGTGGAGGAAAAGGTCAT+TGG | + | Chr7:65003825-65003844 | MsG0780039503.01.T01:CDS | 45.0% | |
| TGCGTTGCTACATTCACTTC+TGG | - | Chr7:65003563-65003582 | None:intergenic | 45.0% | |
| TGCTATCGTTGTGGAGGAAA+AGG | + | Chr7:65003818-65003837 | MsG0780039503.01.T01:CDS | 45.0% | |
| ! | GCTACATTCACTTCTGGGAA+TGG | - | Chr7:65003557-65003576 | None:intergenic | 45.0% |
| ! | GTGGTGACGAAGGAATATCA+TGG | - | Chr7:65003132-65003151 | None:intergenic | 45.0% |
| !!! | AAGATGTTTTGGCGTACGAC+AGG | - | Chr7:65003858-65003877 | None:intergenic | 45.0% |
| ACGTGGTCGTGGTTATGGAA+GGG | + | Chr7:65003649-65003668 | MsG0780039503.01.T01:CDS | 50.0% | |
| CCTTCGTCACCACCTTCATA+AGG | + | Chr7:65003139-65003158 | MsG0780039503.01.T01:CDS | 50.0% | |
| GCAGCAACAATACCGCGAAA+AGG | + | Chr7:65003430-65003449 | MsG0780039503.01.T01:CDS | 50.0% | |
| TATGGACAAACTCGTGGTCG+TGG | + | Chr7:65003590-65003609 | MsG0780039503.01.T01:CDS | 50.0% | |
| ! | CCTTATGAAGGTGGTGACGA+AGG | - | Chr7:65003142-65003161 | None:intergenic | 50.0% |
| ! | TATGGAAGGGGACGTGGTTT+TGG | + | Chr7:65003662-65003681 | MsG0780039503.01.T01:CDS | 50.0% |
| AATCACACGACTCGTCCCAC+TGG | + | Chr7:65003524-65003543 | MsG0780039503.01.T01:CDS | 55.0% | |
| CACGTCCACGACCATAACCA+TGG | - | Chr7:65003622-65003641 | None:intergenic | 55.0% | |
| CATGGTTATGGTCGTGGACG+TGG | + | Chr7:65003620-65003639 | MsG0780039503.01.T01:CDS | 55.0% | |
| CGTGGTCGTGGTTATGGAAG+GGG | + | Chr7:65003650-65003669 | MsG0780039503.01.T01:CDS | 55.0% | |
| GACGTGGTCGTGGTTATGGA+AGG | + | Chr7:65003648-65003667 | MsG0780039503.01.T01:CDS | 55.0% | |
| ! | GGGAATGGAGCACTACCAGT+GGG | - | Chr7:65003542-65003561 | None:intergenic | 55.0% |
| ! | TGGGAATGGAGCACTACCAG+TGG | - | Chr7:65003543-65003562 | None:intergenic | 55.0% |
| CAAACTCGTGGTCGTGGTCG+TGG | + | Chr7:65003596-65003615 | MsG0780039503.01.T01:CDS | 60.0% | |
| CGTGGACGTGGTCGTGGTTA+TGG | + | Chr7:65003644-65003663 | MsG0780039503.01.T01:CDS | 60.0% | |
| CGTGGCCATGGTTATGGTCG+TGG | + | Chr7:65003614-65003633 | MsG0780039503.01.T01:CDS | 60.0% | |
| CGTGGTCGTGGCCATGGTTA+TGG | + | Chr7:65003608-65003627 | MsG0780039503.01.T01:CDS | 60.0% | |
| CGTGGTTATGGAAGGGGACG+TGG | + | Chr7:65003656-65003675 | MsG0780039503.01.T01:CDS | 60.0% | |
| TATGGTCGTGGACGTGGACG+TGG | + | Chr7:65003626-65003645 | MsG0780039503.01.T01:CDS | 60.0% | |
| CGTGGACGTGGACGTGGACG+TGG | + | Chr7:65003632-65003651 | MsG0780039503.01.T01:CDS | 70.0% | |
| CGTGGACGTGGACGTGGTCG+TGG | + | Chr7:65003638-65003657 | MsG0780039503.01.T01:CDS | 70.0% | |
| CGTGGTCGTGGTCGTGGCCA+TGG | + | Chr7:65003602-65003621 | MsG0780039503.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 65002972 | 65004060 | 65002972 | ID=MsG0780039503.01;Name=MsG0780039503.01 |
| Chr7 | mRNA | 65002972 | 65004060 | 65002972 | ID=MsG0780039503.01.T01;Parent=MsG0780039503.01;Name=MsG0780039503.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|362 |
| Chr7 | exon | 65002972 | 65004060 | 65002972 | ID=MsG0780039503.01.T01:exon:10131;Parent=MsG0780039503.01.T01 |
| Chr7 | CDS | 65002972 | 65004060 | 65002972 | ID=MsG0780039503.01.T01:cds;Parent=MsG0780039503.01.T01 |
| Gene Sequence |
| Protein sequence |
