Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038597.01.T01 | XP_039688731.1 | 63.859 | 368 | 104 | 5 | 1 | 360 | 1 | 347 | 5.21E-150 | 437 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0380012021.01 | MsG0780038597.01 | 0.810939 | 8.980941e-51 | 5.487021e-48 |
| MsG0380012033.01 | MsG0780038597.01 | 0.801392 | 9.200512e-49 | 4.388675e-46 |
| MsG0380014122.01 | MsG0780038597.01 | 0.940195 | 3.529193e-100 | 3.801081e-95 |
| MsG0480021775.01 | MsG0780038597.01 | 0.894732 | 1.869422e-75 | 1.882039e-71 |
| MsG0480022862.01 | MsG0780038597.01 | 0.939426 | 1.297473e-99 | 1.331810e-94 |
| MsG0480023011.01 | MsG0780038597.01 | 0.818688 | 1.719829e-52 | 1.296239e-49 |
| MsG0580024918.01 | MsG0780038597.01 | 0.939992 | 4.987531e-100 | 5.306198e-95 |
| MsG0380015877.01 | MsG0780038597.01 | 0.804444 | 2.154304e-49 | 1.110897e-46 |
| MsG0580027617.01 | MsG0780038597.01 | 0.954288 | 4.141451e-112 | 1.154829e-106 |
| MsG0580029101.01 | MsG0780038597.01 | 0.953120 | 5.509668e-111 | 1.413977e-105 |
| MsG0280006510.01 | MsG0780038597.01 | 0.865440 | 5.894887e-65 | 1.918027e-61 |
| MsG0280010102.01 | MsG0780038597.01 | 0.820962 | 5.198810e-53 | 4.174283e-50 |
| MsG0780036201.01 | MsG0780038597.01 | 0.808381 | 3.185412e-50 | 1.818683e-47 |
| MsG0780038597.01 | MsG0780039252.01 | 0.802931 | 4.438448e-49 | 2.201618e-46 |
| MsG0780038597.01 | MsG0780039503.01 | 0.806200 | 9.232337e-50 | 4.980919e-47 |
| MsG0780038597.01 | MsG0780039544.01 | 0.822581 | 2.194565e-53 | 1.844514e-50 |
| MsG0780038597.01 | MsG0780039592.01 | 0.802336 | 5.889552e-49 | 2.877545e-46 |
| MsG0780038597.01 | MsG0780040186.01 | 0.861949 | 7.160133e-64 | 2.061299e-60 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038597.01.T01 | MTR_7g062720 | 65.152 | 132 | 46 | 0 | 1 | 132 | 1 | 132 | 2.65e-58 | 186 |
| MsG0780038597.01.T01 | MTR_5g061150 | 62.205 | 127 | 48 | 0 | 20 | 146 | 10 | 136 | 7.64e-47 | 156 |
| MsG0780038597.01.T01 | MTR_4g037355 | 57.246 | 138 | 36 | 5 | 151 | 287 | 1 | 116 | 1.71e-40 | 139 |
| MsG0780038597.01.T01 | MTR_4g112730 | 68.493 | 73 | 21 | 1 | 138 | 210 | 1 | 71 | 1.30e-24 | 96.7 |
| MsG0780038597.01.T01 | MTR_1g036690 | 58.537 | 82 | 27 | 3 | 280 | 360 | 5 | 80 | 1.07e-22 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 68 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAGGCTCTTAATATTTC+TGG | 0.080746 | 7:+49536115 | MsG0780038597.01.T01:CDS |
| TATAGGTGGGGTTCTATTTC+TGG | 0.146869 | 7:-49537164 | None:intergenic |
| TTCGGCATTTAAATGAATTT+TGG | 0.166319 | 7:-49536167 | None:intergenic |
| CACTTCAAAATAAGGATAAA+AGG | 0.234592 | 7:+49537010 | MsG0780038597.01.T01:CDS |
| CCAACAATCACTTCAAAATA+AGG | 0.244294 | 7:+49537002 | MsG0780038597.01.T01:CDS |
| ATGGTTATATTTGCGTTTAC+AGG | 0.259438 | 7:+49536390 | MsG0780038597.01.T01:CDS |
| TATGGAAGGGGACGTGGTTT+TGG | 0.259444 | 7:+49536775 | MsG0780038597.01.T01:CDS |
| AAATTGTCCCAAAGATCTTT+TGG | 0.267031 | 7:-49536313 | None:intergenic |
| TATTTCTGGAAATAATTATC+TGG | 0.282933 | 7:+49536129 | MsG0780038597.01.T01:CDS |
| TAGAAGATCCAAAAGATCTT+TGG | 0.283634 | 7:+49536305 | MsG0780038597.01.T01:CDS |
| TGTGTTGCTACATTCACTTC+TGG | 0.294995 | 7:-49536679 | None:intergenic |
| TAAAGATCAGCAAGATGTTT+TGG | 0.328294 | 7:-49536979 | None:intergenic |
| TGAAGATGATTATGGTAATA+TGG | 0.338642 | 7:+49537062 | MsG0780038597.01.T01:CDS |
| CTGGAAATAATTATCTGGCT+TGG | 0.347827 | 7:+49536134 | MsG0780038597.01.T01:CDS |
| TGGAAATAATTATCTGGCTT+GGG | 0.353242 | 7:+49536135 | MsG0780038597.01.T01:CDS |
| CGTGGACGTGGTCGTGGTTA+TGG | 0.362984 | 7:+49536757 | MsG0780038597.01.T01:CDS |
| AACCATTCATTACGAGCATT+AGG | 0.386252 | 7:-49536373 | None:intergenic |
| GAAAATGATGAAGATGATTA+TGG | 0.391347 | 7:+49537054 | MsG0780038597.01.T01:CDS |
| TTTGGGACAATTTAAAAGAA+AGG | 0.395342 | 7:+49536323 | MsG0780038597.01.T01:CDS |
| AGAAGATCCAAAAGATCTTT+GGG | 0.400056 | 7:+49536306 | MsG0780038597.01.T01:CDS |
| TGCTATCGTTGTGGAGGAAA+AGG | 0.414829 | 7:+49536931 | MsG0780038597.01.T01:CDS |
| GTGTTGCTACATTCACTTCT+GGG | 0.423307 | 7:-49536678 | None:intergenic |
| CCTTTGTCACCACCTTCATA+AGG | 0.426832 | 7:+49536258 | MsG0780038597.01.T01:CDS |
| CGTGGTTATGGAAGGGGACG+TGG | 0.429618 | 7:+49536769 | MsG0780038597.01.T01:CDS |
| ATTAACACTGTGTGGAGAAA+AGG | 0.440407 | 7:+49536465 | MsG0780038597.01.T01:CDS |
| CAAAATCGTGGTCGTGGCCG+TGG | 0.442209 | 7:+49536715 | MsG0780038597.01.T01:CDS |
| CGTGGTCGTGGCCGTGGTCA+TGG | 0.454221 | 7:+49536721 | MsG0780038597.01.T01:CDS |
| CAAAACAACTGAACAACAAA+AGG | 0.454927 | 7:+49536219 | MsG0780038597.01.T01:CDS |
| AATTGTATCTCCATGCCCTT+CGG | 0.460742 | 7:-49536185 | None:intergenic |
| AGAAATCAGCAGCATCTAAG+TGG | 0.464577 | 7:-49537092 | None:intergenic |
| TTTCACGGTATTGTTGCTGC+AGG | 0.465441 | 7:-49536546 | None:intergenic |
| AATGTTGTAAAGAATGATAT+TGG | 0.471241 | 7:+49536880 | MsG0780038597.01.T01:CDS |
| GCAGCAACAATACCGTGAAA+AGG | 0.474876 | 7:+49536549 | MsG0780038597.01.T01:CDS |
| AATCACTCGGCTCGTCCCAC+TGG | 0.475930 | 7:+49536643 | MsG0780038597.01.T01:CDS |
| GCTACATTCACTTCTGGGAA+TGG | 0.483138 | 7:-49536673 | None:intergenic |
| ACTTCAAAATAAGGATAAAA+GGG | 0.487291 | 7:+49537011 | MsG0780038597.01.T01:CDS |
| CATTTAAATGCCGAAGGGCA+TGG | 0.494088 | 7:+49536175 | MsG0780038597.01.T01:CDS |
| CAGCAACAATACCGTGAAAA+GGG | 0.498612 | 7:+49536550 | MsG0780038597.01.T01:CDS |
| GACGTGGTCGTGGTTATGGA+AGG | 0.501950 | 7:+49536761 | MsG0780038597.01.T01:CDS |
| GTAGCAACACATGATCACTA+TGG | 0.504040 | 7:+49536691 | MsG0780038597.01.T01:CDS |
| GTTGTGGAGGAAAAGGTCAT+TGG | 0.504176 | 7:+49536938 | MsG0780038597.01.T01:CDS |
| CGTGGCCGTGGTCATGGTCG+TGG | 0.506333 | 7:+49536727 | MsG0780038597.01.T01:CDS |
| TTCCTAATGCTCGTAATGAA+TGG | 0.506622 | 7:+49536371 | MsG0780038597.01.T01:CDS |
| TACATTAGATGCATGAAAAG+TGG | 0.516304 | 7:-49536521 | None:intergenic |
| CATGGTCGTGGACGTGGACG+TGG | 0.524744 | 7:+49536739 | MsG0780038597.01.T01:CDS |
| CGTGGACGTGGACGTGGTCG+TGG | 0.524981 | 7:+49536751 | MsG0780038597.01.T01:CDS |
| CATGGAGATACAATTAAAGA+AGG | 0.533844 | 7:+49536193 | MsG0780038597.01.T01:CDS |
| AAAATTCATTTAAATGCCGA+AGG | 0.537172 | 7:+49536169 | MsG0780038597.01.T01:CDS |
| CGTGGTCATGGTCGTGGACG+TGG | 0.540833 | 7:+49536733 | MsG0780038597.01.T01:CDS |
| CGTGGACGTGGACGTGGACG+TGG | 0.546682 | 7:+49536745 | MsG0780038597.01.T01:CDS |
| CCTTATGAAGGTGGTGACAA+AGG | 0.550160 | 7:-49536258 | None:intergenic |
| CGTGGTCGTGGTTATGGAAG+GGG | 0.551769 | 7:+49536763 | MsG0780038597.01.T01:CDS |
| CTTAATATCATGCCTGCTTG+TGG | 0.567363 | 7:+49536591 | MsG0780038597.01.T01:CDS |
| TATGGACAAAATCGTGGTCG+TGG | 0.573891 | 7:+49536709 | MsG0780038597.01.T01:CDS |
| GTCTGTAATCGAATATAACT+CGG | 0.574961 | 7:+49536420 | MsG0780038597.01.T01:CDS |
| AACTGAACAACAAAAGGCTA+AGG | 0.582581 | 7:+49536225 | MsG0780038597.01.T01:CDS |
| GAGAGTATTTGCTATCGTTG+TGG | 0.583351 | 7:+49536922 | MsG0780038597.01.T01:CDS |
| ATTCATTACGAGCATTAGGA+AGG | 0.589984 | 7:-49536369 | None:intergenic |
| ACGTGGTCGTGGTTATGGAA+GGG | 0.598966 | 7:+49536762 | MsG0780038597.01.T01:CDS |
| AGTATTTGCTATCGTTGTGG+AGG | 0.599695 | 7:+49536925 | MsG0780038597.01.T01:CDS |
| GAAATCAGCAGCATCTAAGT+GGG | 0.621669 | 7:-49537091 | None:intergenic |
| AAATTCATTTAAATGCCGAA+GGG | 0.631745 | 7:+49536170 | MsG0780038597.01.T01:CDS |
| GTGGTGACAAAGGAATATCA+TGG | 0.639743 | 7:-49536248 | None:intergenic |
| CACGTCCACGACCATGACCA+CGG | 0.661673 | 7:-49536732 | None:intergenic |
| ACTTCTCTATTAACACTGTG+TGG | 0.668278 | 7:+49536457 | MsG0780038597.01.T01:CDS |
| TGGGAATGGAGCACTACCAG+TGG | 0.672955 | 7:-49536659 | None:intergenic |
| GGGAATGGAGCACTACCAGT+GGG | 0.676344 | 7:-49536658 | None:intergenic |
| GATCACTATGGACAAAATCG+TGG | 0.728183 | 7:+49536703 | MsG0780038597.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTTGTAAAGAATGATAT+TGG | + | Chr7:49536880-49536899 | MsG0780038597.01.T01:CDS | 20.0% |
| !! | ACTTCAAAATAAGGATAAAA+GGG | + | Chr7:49537011-49537030 | MsG0780038597.01.T01:CDS | 20.0% |
| !!! | TATTTCTGGAAATAATTATC+TGG | + | Chr7:49536129-49536148 | MsG0780038597.01.T01:CDS | 20.0% |
| ! | AAAATTCATTTAAATGCCGA+AGG | + | Chr7:49536169-49536188 | MsG0780038597.01.T01:CDS | 25.0% |
| ! | AAATTCATTTAAATGCCGAA+GGG | + | Chr7:49536170-49536189 | MsG0780038597.01.T01:CDS | 25.0% |
| ! | CACTTCAAAATAAGGATAAA+AGG | + | Chr7:49537010-49537029 | MsG0780038597.01.T01:CDS | 25.0% |
| ! | GAAAATGATGAAGATGATTA+TGG | + | Chr7:49537054-49537073 | MsG0780038597.01.T01:CDS | 25.0% |
| ! | TGAAGATGATTATGGTAATA+TGG | + | Chr7:49537062-49537081 | MsG0780038597.01.T01:CDS | 25.0% |
| !! | TATTTTCATCTCTAATGAGA+TGG | - | Chr7:49537143-49537162 | None:intergenic | 25.0% |
| !! | TTACAACATTTTTCATCTTC+TGG | - | Chr7:49536870-49536889 | None:intergenic | 25.0% |
| !! | TTCGGCATTTAAATGAATTT+TGG | - | Chr7:49536170-49536189 | None:intergenic | 25.0% |
| !! | TTTGGGACAATTTAAAAGAA+AGG | + | Chr7:49536323-49536342 | MsG0780038597.01.T01:CDS | 25.0% |
| !!! | CATTTTTTAGATCCTTATGA+AGG | - | Chr7:49536273-49536292 | None:intergenic | 25.0% |
| !!! | GAGAAAATGTGTTTTTGTTT+TGG | - | Chr7:49536846-49536865 | None:intergenic | 25.0% |
| AGAAGATCCAAAAGATCTTT+GGG | + | Chr7:49536306-49536325 | MsG0780038597.01.T01:CDS | 30.0% | |
| ATGGTTATATTTGCGTTTAC+AGG | + | Chr7:49536390-49536409 | MsG0780038597.01.T01:CDS | 30.0% | |
| CAAAACAACTGAACAACAAA+AGG | + | Chr7:49536219-49536238 | MsG0780038597.01.T01:CDS | 30.0% | |
| CATGGAGATACAATTAAAGA+AGG | + | Chr7:49536193-49536212 | MsG0780038597.01.T01:CDS | 30.0% | |
| CCAACAATCACTTCAAAATA+AGG | + | Chr7:49537002-49537021 | MsG0780038597.01.T01:CDS | 30.0% | |
| GTCTGTAATCGAATATAACT+CGG | + | Chr7:49536420-49536439 | MsG0780038597.01.T01:CDS | 30.0% | |
| TACATTAGATGCATGAAAAG+TGG | - | Chr7:49536524-49536543 | None:intergenic | 30.0% | |
| TAGAAGATCCAAAAGATCTT+TGG | + | Chr7:49536305-49536324 | MsG0780038597.01.T01:CDS | 30.0% | |
| ! | AAATTGTCCCAAAGATCTTT+TGG | - | Chr7:49536316-49536335 | None:intergenic | 30.0% |
| ! | AAGATCTTTTGGATCTTCTA+TGG | - | Chr7:49536305-49536324 | None:intergenic | 30.0% |
| ! | GCTTTTGATGAAAAATCACT+CGG | + | Chr7:49536630-49536649 | MsG0780038597.01.T01:CDS | 30.0% |
| ! | TAAAGATCAGCAAGATGTTT+TGG | - | Chr7:49536982-49537001 | None:intergenic | 30.0% |
| ! | TGGAAATAATTATCTGGCTT+GGG | + | Chr7:49536135-49536154 | MsG0780038597.01.T01:CDS | 30.0% |
| ! | TTTGAGGCTCTTAATATTTC+TGG | + | Chr7:49536115-49536134 | MsG0780038597.01.T01:CDS | 30.0% |
| ! | TTTTTAGATCCTTATGAAGG+TGG | - | Chr7:49536270-49536289 | None:intergenic | 30.0% |
| !! | GGTTTTAATCGTAATCACAA+TGG | + | Chr7:49536796-49536815 | MsG0780038597.01.T01:CDS | 30.0% |
| !!! | ACCTTTTAAAACCCTTTTCA+CGG | - | Chr7:49536564-49536583 | None:intergenic | 30.0% |
| !!! | CCTTATTTTGAAGTGATTGT+TGG | - | Chr7:49537005-49537024 | None:intergenic | 30.0% |
| AACCATTCATTACGAGCATT+AGG | - | Chr7:49536376-49536395 | None:intergenic | 35.0% | |
| AACTGAACAACAAAAGGCTA+AGG | + | Chr7:49536225-49536244 | MsG0780038597.01.T01:CDS | 35.0% | |
| ACTTCTCTATTAACACTGTG+TGG | + | Chr7:49536457-49536476 | MsG0780038597.01.T01:CDS | 35.0% | |
| ATTAACACTGTGTGGAGAAA+AGG | + | Chr7:49536465-49536484 | MsG0780038597.01.T01:CDS | 35.0% | |
| ATTCATTACGAGCATTAGGA+AGG | - | Chr7:49536372-49536391 | None:intergenic | 35.0% | |
| CTGGAAATAATTATCTGGCT+TGG | + | Chr7:49536134-49536153 | MsG0780038597.01.T01:CDS | 35.0% | |
| TTCCTAATGCTCGTAATGAA+TGG | + | Chr7:49536371-49536390 | MsG0780038597.01.T01:CDS | 35.0% | |
| ! | AGATGGTCAATCTTTTCATC+AGG | - | Chr7:49537126-49537145 | None:intergenic | 35.0% |
| ! | CCTCAAAATCAAGTTTTGCA+AGG | - | Chr7:49536102-49536121 | None:intergenic | 35.0% |
| ! | CCTTGCAAAACTTGATTTTG+AGG | + | Chr7:49536099-49536118 | MsG0780038597.01.T01:CDS | 35.0% |
| ! | CTTTTGGATCTTCTATGGTA+AGG | - | Chr7:49536300-49536319 | None:intergenic | 35.0% |
| !!! | ACCGTGAAAAGGGTTTTAAA+AGG | + | Chr7:49536560-49536579 | MsG0780038597.01.T01:CDS | 35.0% |
| AATTGTATCTCCATGCCCTT+CGG | - | Chr7:49536188-49536207 | None:intergenic | 40.0% | |
| AGAAATCAGCAGCATCTAAG+TGG | - | Chr7:49537095-49537114 | None:intergenic | 40.0% | |
| CAGCAACAATACCGTGAAAA+GGG | + | Chr7:49536550-49536569 | MsG0780038597.01.T01:CDS | 40.0% | |
| CTTAATATCATGCCTGCTTG+TGG | + | Chr7:49536591-49536610 | MsG0780038597.01.T01:CDS | 40.0% | |
| GAAATCAGCAGCATCTAAGT+GGG | - | Chr7:49537094-49537113 | None:intergenic | 40.0% | |
| GATCACTATGGACAAAATCG+TGG | + | Chr7:49536703-49536722 | MsG0780038597.01.T01:CDS | 40.0% | |
| GTAGCAACACATGATCACTA+TGG | + | Chr7:49536691-49536710 | MsG0780038597.01.T01:CDS | 40.0% | |
| GTGGTGACAAAGGAATATCA+TGG | - | Chr7:49536251-49536270 | None:intergenic | 40.0% | |
| ! | GAAGGATGACAGTTTTCTGA+TGG | - | Chr7:49536354-49536373 | None:intergenic | 40.0% |
| ! | GTGTTGCTACATTCACTTCT+GGG | - | Chr7:49536681-49536700 | None:intergenic | 40.0% |
| ! | TATTTTGTTCTGCCACAAGC+AGG | - | Chr7:49536606-49536625 | None:intergenic | 40.0% |
| ! | TGTGTTGCTACATTCACTTC+TGG | - | Chr7:49536682-49536701 | None:intergenic | 40.0% |
| !! | AGTATTTGCTATCGTTGTGG+AGG | + | Chr7:49536925-49536944 | MsG0780038597.01.T01:CDS | 40.0% |
| !! | GAGAGTATTTGCTATCGTTG+TGG | + | Chr7:49536922-49536941 | MsG0780038597.01.T01:CDS | 40.0% |
| CATTTAAATGCCGAAGGGCA+TGG | + | Chr7:49536175-49536194 | MsG0780038597.01.T01:CDS | 45.0% | |
| CCTTATGAAGGTGGTGACAA+AGG | - | Chr7:49536261-49536280 | None:intergenic | 45.0% | |
| CCTTTGTCACCACCTTCATA+AGG | + | Chr7:49536258-49536277 | MsG0780038597.01.T01:CDS | 45.0% | |
| GCAGCAACAATACCGTGAAA+AGG | + | Chr7:49536549-49536568 | MsG0780038597.01.T01:CDS | 45.0% | |
| GTTGTGGAGGAAAAGGTCAT+TGG | + | Chr7:49536938-49536957 | MsG0780038597.01.T01:CDS | 45.0% | |
| TATGGACAAAATCGTGGTCG+TGG | + | Chr7:49536709-49536728 | MsG0780038597.01.T01:CDS | 45.0% | |
| TGCTATCGTTGTGGAGGAAA+AGG | + | Chr7:49536931-49536950 | MsG0780038597.01.T01:CDS | 45.0% | |
| TTTCACGGTATTGTTGCTGC+AGG | - | Chr7:49536549-49536568 | None:intergenic | 45.0% | |
| ! | GCTACATTCACTTCTGGGAA+TGG | - | Chr7:49536676-49536695 | None:intergenic | 45.0% |
| !!! | AAGATGTTTTGGCGTACGAC+AGG | - | Chr7:49536971-49536990 | None:intergenic | 45.0% |
| ACGTGGTCGTGGTTATGGAA+GGG | + | Chr7:49536762-49536781 | MsG0780038597.01.T01:CDS | 50.0% | |
| ! | TATGGAAGGGGACGTGGTTT+TGG | + | Chr7:49536775-49536794 | MsG0780038597.01.T01:CDS | 50.0% |
| CGTGGTCGTGGTTATGGAAG+GGG | + | Chr7:49536763-49536782 | MsG0780038597.01.T01:CDS | 55.0% | |
| GACGTGGTCGTGGTTATGGA+AGG | + | Chr7:49536761-49536780 | MsG0780038597.01.T01:CDS | 55.0% | |
| ! | GGGAATGGAGCACTACCAGT+GGG | - | Chr7:49536661-49536680 | None:intergenic | 55.0% |
| ! | TGGGAATGGAGCACTACCAG+TGG | - | Chr7:49536662-49536681 | None:intergenic | 55.0% |
| CAAAATCGTGGTCGTGGCCG+TGG | + | Chr7:49536715-49536734 | MsG0780038597.01.T01:CDS | 60.0% | |
| CACGTCCACGACCATGACCA+CGG | - | Chr7:49536735-49536754 | None:intergenic | 60.0% | |
| CGTGGACGTGGTCGTGGTTA+TGG | + | Chr7:49536757-49536776 | MsG0780038597.01.T01:CDS | 60.0% | |
| CGTGGTTATGGAAGGGGACG+TGG | + | Chr7:49536769-49536788 | MsG0780038597.01.T01:CDS | 60.0% | |
| ! | AATCACTCGGCTCGTCCCAC+TGG | + | Chr7:49536643-49536662 | MsG0780038597.01.T01:CDS | 60.0% |
| CATGGTCGTGGACGTGGACG+TGG | + | Chr7:49536739-49536758 | MsG0780038597.01.T01:CDS | 65.0% | |
| CGTGGTCATGGTCGTGGACG+TGG | + | Chr7:49536733-49536752 | MsG0780038597.01.T01:CDS | 65.0% | |
| CGTGGACGTGGACGTGGACG+TGG | + | Chr7:49536745-49536764 | MsG0780038597.01.T01:CDS | 70.0% | |
| CGTGGACGTGGACGTGGTCG+TGG | + | Chr7:49536751-49536770 | MsG0780038597.01.T01:CDS | 70.0% | |
| CGTGGCCGTGGTCATGGTCG+TGG | + | Chr7:49536727-49536746 | MsG0780038597.01.T01:CDS | 70.0% | |
| CGTGGTCGTGGCCGTGGTCA+TGG | + | Chr7:49536721-49536740 | MsG0780038597.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 49536091 | 49537173 | 49536091 | ID=MsG0780038597.01;Name=MsG0780038597.01 |
| Chr7 | mRNA | 49536091 | 49537173 | 49536091 | ID=MsG0780038597.01.T01;Parent=MsG0780038597.01;Name=MsG0780038597.01.T01;_AED=0.28;_eAED=0.28;_QI=0|-1|0|1|-1|1|1|0|360 |
| Chr7 | exon | 49536091 | 49537173 | 49536091 | ID=MsG0780038597.01.T01:exon:6665;Parent=MsG0780038597.01.T01 |
| Chr7 | CDS | 49536091 | 49537173 | 49536091 | ID=MsG0780038597.01.T01:cds;Parent=MsG0780038597.01.T01 |
| Gene Sequence |
| Protein sequence |
