Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027617.01.T01 | XP_039688731.1 | 64.13 | 368 | 103 | 5 | 1 | 360 | 1 | 347 | 4.34E-152 | 442 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027617.01.T01 | A0A6D2I977 | 59.831 | 356 | 109 | 6 | 1 | 343 | 1 | 335 | 5.79e-138 | 405 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0380012021.01 | MsG0580027617.01 | 0.822380 | 2.443817e-53 | 2.042237e-50 |
| MsG0380014122.01 | MsG0580027617.01 | 0.966872 | 1.667849e-126 | 1.187277e-120 |
| MsG0480018934.01 | MsG0580027617.01 | 0.803110 | 4.076168e-49 | 2.031112e-46 |
| MsG0480021775.01 | MsG0580027617.01 | 0.892880 | 1.055294e-74 | 9.824142e-71 |
| MsG0480022862.01 | MsG0580027617.01 | 0.968875 | 2.650176e-129 | 2.295112e-123 |
| MsG0480023011.01 | MsG0580027617.01 | 0.800538 | 1.375437e-48 | 6.420517e-46 |
| MsG0580024918.01 | MsG0580027617.01 | 0.933611 | 1.440097e-95 | 1.033155e-90 |
| MsG0380015877.01 | MsG0580027617.01 | 0.812447 | 4.221220e-51 | 2.684706e-48 |
| MsG0580027617.01 | MsG0580029101.01 | 0.984804 | 1.224246e-161 | 4.598210e-155 |
| MsG0580027617.01 | MsG0780036201.01 | 0.808077 | 3.696513e-50 | 2.093594e-47 |
| MsG0580027617.01 | MsG0780038597.01 | 0.954288 | 4.141451e-112 | 1.154829e-106 |
| MsG0580027617.01 | MsG0780039252.01 | 0.806379 | 8.463451e-50 | 4.586800e-47 |
| MsG0580027617.01 | MsG0780039503.01 | 0.803871 | 2.834490e-49 | 1.440396e-46 |
| MsG0580027617.01 | MsG0780039544.01 | 0.815425 | 9.307458e-52 | 6.414726e-49 |
| MsG0580027617.01 | MsG0780039592.01 | 0.800878 | 1.172259e-48 | 5.519879e-46 |
| MsG0580027617.01 | MsG0780040186.01 | 0.897262 | 1.667315e-76 | 1.868312e-72 |
| MsG0280006510.01 | MsG0580027617.01 | 0.854226 | 1.417221e-61 | 3.143547e-58 |
| MsG0280010102.01 | MsG0580027617.01 | 0.809959 | 1.461805e-50 | 8.702059e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027617.01.T01 | MTR_7g062720 | 61.268 | 142 | 55 | 0 | 1 | 142 | 1 | 142 | 7.14e-60 | 191 |
| MsG0580027617.01.T01 | MTR_5g061150 | 62.992 | 127 | 47 | 0 | 20 | 146 | 10 | 136 | 4.56e-48 | 159 |
| MsG0580027617.01.T01 | MTR_4g037355 | 57.971 | 138 | 35 | 5 | 151 | 287 | 1 | 116 | 2.57e-41 | 142 |
| MsG0580027617.01.T01 | MTR_4g112730 | 71.831 | 71 | 18 | 1 | 138 | 208 | 1 | 69 | 1.07e-26 | 102 |
| MsG0580027617.01.T01 | MTR_1g036690 | 58.537 | 82 | 27 | 3 | 280 | 360 | 5 | 80 | 1.15e-22 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 69 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAGGCTCTTAATATTTC+TGG | 0.080746 | 5:-64446095 | MsG0580027617.01.T01:CDS |
| TTCGGCATTTAAATGAATTT+TGG | 0.166319 | 5:+64446043 | None:intergenic |
| CACTTCAAAATAAGGATAAA+AGG | 0.234592 | 5:-64445200 | MsG0580027617.01.T01:CDS |
| CCAACAATCACTTCAAAATA+AGG | 0.244294 | 5:-64445208 | MsG0580027617.01.T01:CDS |
| ATGGTTATATTTGCGTTTAC+AGG | 0.259438 | 5:-64445820 | MsG0580027617.01.T01:CDS |
| TATGGAAGGGGACGTGGTTT+TGG | 0.259444 | 5:-64445435 | MsG0580027617.01.T01:CDS |
| AAATTGTCCCAAAGATCTTT+TGG | 0.267031 | 5:+64445897 | None:intergenic |
| TATTTCTGGAAATAATTATC+TGG | 0.282933 | 5:-64446081 | MsG0580027617.01.T01:CDS |
| TAGAAGATCCAAAAGATCTT+TGG | 0.283634 | 5:-64445905 | MsG0580027617.01.T01:CDS |
| TGTGTTGCTACATTCACTTC+TGG | 0.294995 | 5:+64445531 | None:intergenic |
| TATAGGTGGGGTTCTATTCC+TGG | 0.331534 | 5:+64445046 | None:intergenic |
| TAAAGATCAACAAGATGTTT+TGG | 0.333763 | 5:+64445231 | None:intergenic |
| TGAAGATGATTATGGTAATA+TGG | 0.338642 | 5:-64445148 | MsG0580027617.01.T01:CDS |
| CTGGAAATAATTATCTGGCT+TGG | 0.347827 | 5:-64446076 | MsG0580027617.01.T01:CDS |
| TGGAAATAATTATCTGGCTT+GGG | 0.353242 | 5:-64446075 | MsG0580027617.01.T01:CDS |
| CGTGGACGTGGTCGTGGTTA+TGG | 0.362984 | 5:-64445453 | MsG0580027617.01.T01:CDS |
| AACCATTCATTACGAGCATT+AGG | 0.386252 | 5:+64445837 | None:intergenic |
| GAAAATGATGAAGATGATTA+TGG | 0.391347 | 5:-64445156 | MsG0580027617.01.T01:CDS |
| TTTGGGACAATTTAAAAGAA+AGG | 0.395342 | 5:-64445887 | MsG0580027617.01.T01:CDS |
| AGAAGATCCAAAAGATCTTT+GGG | 0.400056 | 5:-64445904 | MsG0580027617.01.T01:CDS |
| TGCTATCGTTGTGGAGGAAA+AGG | 0.414829 | 5:-64445279 | MsG0580027617.01.T01:CDS |
| GTGTTGCTACATTCACTTCT+GGG | 0.423307 | 5:+64445532 | None:intergenic |
| CGTGGTTATGGAAGGGGACG+TGG | 0.429618 | 5:-64445441 | MsG0580027617.01.T01:CDS |
| CCTTCGTCACCACCTTCATA+AGG | 0.433246 | 5:-64445952 | MsG0580027617.01.T01:CDS |
| ATTAACACTGTGTGGAGAAA+AGG | 0.440407 | 5:-64445745 | MsG0580027617.01.T01:CDS |
| CAAAATCGTGGTCGTGGCCG+TGG | 0.442209 | 5:-64445495 | MsG0580027617.01.T01:CDS |
| CGTGGTCGTGGCCGTGGTCA+TGG | 0.454221 | 5:-64445489 | MsG0580027617.01.T01:CDS |
| CAAAACAACTGAACAACAAA+AGG | 0.454927 | 5:-64445991 | MsG0580027617.01.T01:CDS |
| AATTGTATCTCCATGCCCTT+CGG | 0.460742 | 5:+64446025 | None:intergenic |
| AGAAATCAGCAGCATCTAAG+TGG | 0.464577 | 5:+64445118 | None:intergenic |
| TTTCACGGTATTGTTGCTGC+AGG | 0.465441 | 5:+64445664 | None:intergenic |
| AATGTTGTAAAGAATGATAT+TGG | 0.471241 | 5:-64445330 | MsG0580027617.01.T01:CDS |
| GCAGCAACAATACCGTGAAA+AGG | 0.474876 | 5:-64445661 | MsG0580027617.01.T01:CDS |
| AATCACTCGGCTCGTCCCAC+TGG | 0.475930 | 5:-64445567 | MsG0580027617.01.T01:CDS |
| GCTACATTCACTTCTGGGAA+TGG | 0.483138 | 5:+64445537 | None:intergenic |
| ACTTCAAAATAAGGATAAAA+GGG | 0.487291 | 5:-64445199 | MsG0580027617.01.T01:CDS |
| CATTTAAATGCCGAAGGGCA+TGG | 0.494088 | 5:-64446035 | MsG0580027617.01.T01:CDS |
| CAGCAACAATACCGTGAAAA+GGG | 0.498612 | 5:-64445660 | MsG0580027617.01.T01:CDS |
| GACGTGGTCGTGGTTATGGA+AGG | 0.501950 | 5:-64445449 | MsG0580027617.01.T01:CDS |
| GTAGCAACACATGATCACTA+TGG | 0.504040 | 5:-64445519 | MsG0580027617.01.T01:CDS |
| GTTGTGGAGGAAAAGGTCAT+TGG | 0.504176 | 5:-64445272 | MsG0580027617.01.T01:CDS |
| CGTGGCCGTGGTCATGGTCG+TGG | 0.506333 | 5:-64445483 | MsG0580027617.01.T01:CDS |
| TTCCTAATGCTCGTAATGAA+TGG | 0.506622 | 5:-64445839 | MsG0580027617.01.T01:CDS |
| TACATTAGATGCATGAAAAG+TGG | 0.516304 | 5:+64445689 | None:intergenic |
| CATGGTCGTGGACGTGGACG+TGG | 0.524744 | 5:-64445471 | MsG0580027617.01.T01:CDS |
| CGTGGACGTGGACGTGGTCG+TGG | 0.524981 | 5:-64445459 | MsG0580027617.01.T01:CDS |
| CATTAGAGATGAAAATATCC+AGG | 0.532865 | 5:-64445064 | MsG0580027617.01.T01:CDS |
| CATGGAGATACAATTAAAGA+AGG | 0.533844 | 5:-64446017 | MsG0580027617.01.T01:CDS |
| AAAATTCATTTAAATGCCGA+AGG | 0.537172 | 5:-64446041 | MsG0580027617.01.T01:CDS |
| CGTGGTCATGGTCGTGGACG+TGG | 0.540833 | 5:-64445477 | MsG0580027617.01.T01:CDS |
| CGTGGACGTGGACGTGGACG+TGG | 0.546682 | 5:-64445465 | MsG0580027617.01.T01:CDS |
| CGTGGTCGTGGTTATGGAAG+GGG | 0.551769 | 5:-64445447 | MsG0580027617.01.T01:CDS |
| CTTAATATCATGCCTGCTTG+TGG | 0.567363 | 5:-64445619 | MsG0580027617.01.T01:CDS |
| TATGGACAAAATCGTGGTCG+TGG | 0.573891 | 5:-64445501 | MsG0580027617.01.T01:CDS |
| GTCTGTAATCGAATATAACT+CGG | 0.574961 | 5:-64445790 | MsG0580027617.01.T01:CDS |
| AACTGAACAACAAAAGGCTA+AGG | 0.582581 | 5:-64445985 | MsG0580027617.01.T01:CDS |
| GAGAGTATTTGCTATCGTTG+TGG | 0.583351 | 5:-64445288 | MsG0580027617.01.T01:CDS |
| ATTCATTACGAGCATTAGGA+AGG | 0.589984 | 5:+64445841 | None:intergenic |
| CCTTATGAAGGTGGTGACGA+AGG | 0.598722 | 5:+64445952 | None:intergenic |
| ACGTGGTCGTGGTTATGGAA+GGG | 0.598966 | 5:-64445448 | MsG0580027617.01.T01:CDS |
| AGTATTTGCTATCGTTGTGG+AGG | 0.599695 | 5:-64445285 | MsG0580027617.01.T01:CDS |
| GAAATCAGCAGCATCTAAGT+GGG | 0.621669 | 5:+64445119 | None:intergenic |
| AAATTCATTTAAATGCCGAA+GGG | 0.631745 | 5:-64446040 | MsG0580027617.01.T01:CDS |
| CACGTCCACGACCATGACCA+CGG | 0.661673 | 5:+64445478 | None:intergenic |
| GTGGTGACGAAGGAATATCA+TGG | 0.663314 | 5:+64445962 | None:intergenic |
| ACTTCTCTATTAACACTGTG+TGG | 0.668278 | 5:-64445753 | MsG0580027617.01.T01:CDS |
| TGGGAATGGAGCACTACCAG+TGG | 0.672955 | 5:+64445551 | None:intergenic |
| GGGAATGGAGCACTACCAGT+GGG | 0.676344 | 5:+64445552 | None:intergenic |
| GATCACTATGGACAAAATCG+TGG | 0.728183 | 5:-64445507 | MsG0580027617.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTTGTAAAGAATGATAT+TGG | - | Chr5:64445848-64445867 | MsG0580027617.01.T01:CDS | 20.0% |
| !! | ACTTCAAAATAAGGATAAAA+GGG | - | Chr5:64445979-64445998 | MsG0580027617.01.T01:CDS | 20.0% |
| !!! | TATTTCTGGAAATAATTATC+TGG | - | Chr5:64445097-64445116 | MsG0580027617.01.T01:CDS | 20.0% |
| ! | AAAATTCATTTAAATGCCGA+AGG | - | Chr5:64445137-64445156 | MsG0580027617.01.T01:CDS | 25.0% |
| ! | AAATTCATTTAAATGCCGAA+GGG | - | Chr5:64445138-64445157 | MsG0580027617.01.T01:CDS | 25.0% |
| ! | CACTTCAAAATAAGGATAAA+AGG | - | Chr5:64445978-64445997 | MsG0580027617.01.T01:CDS | 25.0% |
| ! | GAAAATGATGAAGATGATTA+TGG | - | Chr5:64446022-64446041 | MsG0580027617.01.T01:CDS | 25.0% |
| ! | TGAAGATGATTATGGTAATA+TGG | - | Chr5:64446030-64446049 | MsG0580027617.01.T01:CDS | 25.0% |
| !! | TAAAGATCAACAAGATGTTT+TGG | + | Chr5:64445950-64445969 | None:intergenic | 25.0% |
| !! | TATTTTCATCTCTAATGAGA+TGG | + | Chr5:64446111-64446130 | None:intergenic | 25.0% |
| !! | TTACAACATTTTTCATCTTC+TGG | + | Chr5:64445838-64445857 | None:intergenic | 25.0% |
| !! | TTCGGCATTTAAATGAATTT+TGG | + | Chr5:64445138-64445157 | None:intergenic | 25.0% |
| !! | TTTGGGACAATTTAAAAGAA+AGG | - | Chr5:64445291-64445310 | MsG0580027617.01.T01:CDS | 25.0% |
| !!! | CATTTTTTAGATCCTTATGA+AGG | + | Chr5:64445241-64445260 | None:intergenic | 25.0% |
| !!! | GAGAAAATGTGTTTTTGTTT+TGG | + | Chr5:64445814-64445833 | None:intergenic | 25.0% |
| AGAAGATCCAAAAGATCTTT+GGG | - | Chr5:64445274-64445293 | MsG0580027617.01.T01:CDS | 30.0% | |
| ATGGTTATATTTGCGTTTAC+AGG | - | Chr5:64445358-64445377 | MsG0580027617.01.T01:CDS | 30.0% | |
| CAAAACAACTGAACAACAAA+AGG | - | Chr5:64445187-64445206 | MsG0580027617.01.T01:CDS | 30.0% | |
| CATGGAGATACAATTAAAGA+AGG | - | Chr5:64445161-64445180 | MsG0580027617.01.T01:CDS | 30.0% | |
| CATTAGAGATGAAAATATCC+AGG | - | Chr5:64446114-64446133 | MsG0580027617.01.T01:CDS | 30.0% | |
| CCAACAATCACTTCAAAATA+AGG | - | Chr5:64445970-64445989 | MsG0580027617.01.T01:CDS | 30.0% | |
| GTCTGTAATCGAATATAACT+CGG | - | Chr5:64445388-64445407 | MsG0580027617.01.T01:CDS | 30.0% | |
| TACATTAGATGCATGAAAAG+TGG | + | Chr5:64445492-64445511 | None:intergenic | 30.0% | |
| TAGAAGATCCAAAAGATCTT+TGG | - | Chr5:64445273-64445292 | MsG0580027617.01.T01:CDS | 30.0% | |
| ! | AAATTGTCCCAAAGATCTTT+TGG | + | Chr5:64445284-64445303 | None:intergenic | 30.0% |
| ! | AAGATCTTTTGGATCTTCTA+TGG | + | Chr5:64445273-64445292 | None:intergenic | 30.0% |
| ! | GCTTTTGATGAAAAATCACT+CGG | - | Chr5:64445598-64445617 | MsG0580027617.01.T01:CDS | 30.0% |
| ! | TGGAAATAATTATCTGGCTT+GGG | - | Chr5:64445103-64445122 | MsG0580027617.01.T01:CDS | 30.0% |
| ! | TTTGAGGCTCTTAATATTTC+TGG | - | Chr5:64445083-64445102 | MsG0580027617.01.T01:CDS | 30.0% |
| ! | TTTTTAGATCCTTATGAAGG+TGG | + | Chr5:64445238-64445257 | None:intergenic | 30.0% |
| !! | GGTTTTAATCGTAATCACAA+TGG | - | Chr5:64445764-64445783 | MsG0580027617.01.T01:CDS | 30.0% |
| !!! | ACCTTTTAAAACCCTTTTCA+CGG | + | Chr5:64445532-64445551 | None:intergenic | 30.0% |
| !!! | CCTTATTTTGAAGTGATTGT+TGG | + | Chr5:64445973-64445992 | None:intergenic | 30.0% |
| AACCATTCATTACGAGCATT+AGG | + | Chr5:64445344-64445363 | None:intergenic | 35.0% | |
| AACTGAACAACAAAAGGCTA+AGG | - | Chr5:64445193-64445212 | MsG0580027617.01.T01:CDS | 35.0% | |
| ACTTCTCTATTAACACTGTG+TGG | - | Chr5:64445425-64445444 | MsG0580027617.01.T01:CDS | 35.0% | |
| ATTAACACTGTGTGGAGAAA+AGG | - | Chr5:64445433-64445452 | MsG0580027617.01.T01:CDS | 35.0% | |
| ATTCATTACGAGCATTAGGA+AGG | + | Chr5:64445340-64445359 | None:intergenic | 35.0% | |
| CTGGAAATAATTATCTGGCT+TGG | - | Chr5:64445102-64445121 | MsG0580027617.01.T01:CDS | 35.0% | |
| TTCCTAATGCTCGTAATGAA+TGG | - | Chr5:64445339-64445358 | MsG0580027617.01.T01:CDS | 35.0% | |
| ! | AGATGGTCAATCTTTTCATC+AGG | + | Chr5:64446094-64446113 | None:intergenic | 35.0% |
| ! | CCTCAAAATCAAGTTTTGCA+AGG | + | Chr5:64445070-64445089 | None:intergenic | 35.0% |
| ! | CCTTGCAAAACTTGATTTTG+AGG | - | Chr5:64445067-64445086 | MsG0580027617.01.T01:CDS | 35.0% |
| ! | CTTTTGGATCTTCTATGGTA+AGG | + | Chr5:64445268-64445287 | None:intergenic | 35.0% |
| !!! | ACCGTGAAAAGGGTTTTAAA+AGG | - | Chr5:64445528-64445547 | MsG0580027617.01.T01:CDS | 35.0% |
| AATTGTATCTCCATGCCCTT+CGG | + | Chr5:64445156-64445175 | None:intergenic | 40.0% | |
| AGAAATCAGCAGCATCTAAG+TGG | + | Chr5:64446063-64446082 | None:intergenic | 40.0% | |
| CAGCAACAATACCGTGAAAA+GGG | - | Chr5:64445518-64445537 | MsG0580027617.01.T01:CDS | 40.0% | |
| CTTAATATCATGCCTGCTTG+TGG | - | Chr5:64445559-64445578 | MsG0580027617.01.T01:CDS | 40.0% | |
| GAAATCAGCAGCATCTAAGT+GGG | + | Chr5:64446062-64446081 | None:intergenic | 40.0% | |
| GATCACTATGGACAAAATCG+TGG | - | Chr5:64445671-64445690 | MsG0580027617.01.T01:CDS | 40.0% | |
| GTAGCAACACATGATCACTA+TGG | - | Chr5:64445659-64445678 | MsG0580027617.01.T01:CDS | 40.0% | |
| ! | GAAGGATGACAGTTTTCTGA+TGG | + | Chr5:64445322-64445341 | None:intergenic | 40.0% |
| ! | GTGTTGCTACATTCACTTCT+GGG | + | Chr5:64445649-64445668 | None:intergenic | 40.0% |
| ! | TATTTTGTTCTGCCACAAGC+AGG | + | Chr5:64445574-64445593 | None:intergenic | 40.0% |
| ! | TGTGTTGCTACATTCACTTC+TGG | + | Chr5:64445650-64445669 | None:intergenic | 40.0% |
| !! | AGTATTTGCTATCGTTGTGG+AGG | - | Chr5:64445893-64445912 | MsG0580027617.01.T01:CDS | 40.0% |
| !! | GAGAGTATTTGCTATCGTTG+TGG | - | Chr5:64445890-64445909 | MsG0580027617.01.T01:CDS | 40.0% |
| CATTTAAATGCCGAAGGGCA+TGG | - | Chr5:64445143-64445162 | MsG0580027617.01.T01:CDS | 45.0% | |
| GCAGCAACAATACCGTGAAA+AGG | - | Chr5:64445517-64445536 | MsG0580027617.01.T01:CDS | 45.0% | |
| GTTGTGGAGGAAAAGGTCAT+TGG | - | Chr5:64445906-64445925 | MsG0580027617.01.T01:CDS | 45.0% | |
| TATGGACAAAATCGTGGTCG+TGG | - | Chr5:64445677-64445696 | MsG0580027617.01.T01:CDS | 45.0% | |
| TGCTATCGTTGTGGAGGAAA+AGG | - | Chr5:64445899-64445918 | MsG0580027617.01.T01:CDS | 45.0% | |
| TTTCACGGTATTGTTGCTGC+AGG | + | Chr5:64445517-64445536 | None:intergenic | 45.0% | |
| ! | GCTACATTCACTTCTGGGAA+TGG | + | Chr5:64445644-64445663 | None:intergenic | 45.0% |
| ! | GTGGTGACGAAGGAATATCA+TGG | + | Chr5:64445219-64445238 | None:intergenic | 45.0% |
| !!! | AAGATGTTTTGGCGTACGAC+AGG | + | Chr5:64445939-64445958 | None:intergenic | 45.0% |
| ACGTGGTCGTGGTTATGGAA+GGG | - | Chr5:64445730-64445749 | MsG0580027617.01.T01:CDS | 50.0% | |
| CCTTCGTCACCACCTTCATA+AGG | - | Chr5:64445226-64445245 | MsG0580027617.01.T01:CDS | 50.0% | |
| ! | CCTTATGAAGGTGGTGACGA+AGG | + | Chr5:64445229-64445248 | None:intergenic | 50.0% |
| ! | TATGGAAGGGGACGTGGTTT+TGG | - | Chr5:64445743-64445762 | MsG0580027617.01.T01:CDS | 50.0% |
| CGTGGTCGTGGTTATGGAAG+GGG | - | Chr5:64445731-64445750 | MsG0580027617.01.T01:CDS | 55.0% | |
| GACGTGGTCGTGGTTATGGA+AGG | - | Chr5:64445729-64445748 | MsG0580027617.01.T01:CDS | 55.0% | |
| ! | GGGAATGGAGCACTACCAGT+GGG | + | Chr5:64445629-64445648 | None:intergenic | 55.0% |
| ! | TGGGAATGGAGCACTACCAG+TGG | + | Chr5:64445630-64445649 | None:intergenic | 55.0% |
| CAAAATCGTGGTCGTGGCCG+TGG | - | Chr5:64445683-64445702 | MsG0580027617.01.T01:CDS | 60.0% | |
| CACGTCCACGACCATGACCA+CGG | + | Chr5:64445703-64445722 | None:intergenic | 60.0% | |
| CGTGGACGTGGTCGTGGTTA+TGG | - | Chr5:64445725-64445744 | MsG0580027617.01.T01:CDS | 60.0% | |
| CGTGGTTATGGAAGGGGACG+TGG | - | Chr5:64445737-64445756 | MsG0580027617.01.T01:CDS | 60.0% | |
| ! | AATCACTCGGCTCGTCCCAC+TGG | - | Chr5:64445611-64445630 | MsG0580027617.01.T01:CDS | 60.0% |
| CATGGTCGTGGACGTGGACG+TGG | - | Chr5:64445707-64445726 | MsG0580027617.01.T01:CDS | 65.0% | |
| CGTGGTCATGGTCGTGGACG+TGG | - | Chr5:64445701-64445720 | MsG0580027617.01.T01:CDS | 65.0% | |
| CGTGGACGTGGACGTGGACG+TGG | - | Chr5:64445713-64445732 | MsG0580027617.01.T01:CDS | 70.0% | |
| CGTGGACGTGGACGTGGTCG+TGG | - | Chr5:64445719-64445738 | MsG0580027617.01.T01:CDS | 70.0% | |
| CGTGGCCGTGGTCATGGTCG+TGG | - | Chr5:64445695-64445714 | MsG0580027617.01.T01:CDS | 70.0% | |
| CGTGGTCGTGGCCGTGGTCA+TGG | - | Chr5:64445689-64445708 | MsG0580027617.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 64445059 | 64446141 | 64445059 | ID=MsG0580027617.01;Name=MsG0580027617.01 |
| Chr5 | mRNA | 64445059 | 64446141 | 64445059 | ID=MsG0580027617.01.T01;Parent=MsG0580027617.01;Name=MsG0580027617.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|360 |
| Chr5 | exon | 64445059 | 64446141 | 64445059 | ID=MsG0580027617.01.T01:exon:23091;Parent=MsG0580027617.01.T01 |
| Chr5 | CDS | 64445059 | 64446141 | 64445059 | ID=MsG0580027617.01.T01:cds;Parent=MsG0580027617.01.T01 |
| Gene Sequence |
| Protein sequence |
