AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040877.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040877.01.T01 AT2G37340 56.021 191 23 3 1 191 1 130 6.84e-60 194
MsG0780040877.01.T01 AT3G53500 54.737 190 25 3 1 190 1 129 3.11e-55 182
MsG0780040877.01.T01 AT2G37340 66.667 99 27 1 92 190 7 99 3.90e-40 142
MsG0780040877.01.T01 AT2G37340 66.667 99 27 1 92 190 7 99 3.90e-40 142
MsG0780040877.01.T01 AT2G37340 66.667 99 27 1 92 190 7 99 3.90e-40 142
MsG0780040877.01.T01 AT3G53500 72.222 90 19 1 101 190 5 88 3.03e-38 136
MsG0780040877.01.T01 AT3G53500 72.222 90 19 1 101 190 5 88 3.03e-38 136
MsG0780040877.01.T01 AT2G37340 70.330 91 21 1 101 191 5 89 4.97e-38 136
MsG0780040877.01.T01 AT2G37340 70.330 91 21 1 101 191 5 89 4.97e-38 136

Find 142 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGGGATTCTAGGGAATATT+TGG 0.121434 7:-83756190 MsG0780040877.01.T01:CDS
CTGCTGCGCCCATTAGCCTT+AGG 0.207621 7:+83755430 None:intergenic
CAACTCTGCTTGGTCCTGTT+TGG 0.231919 7:-83754935 MsG0780040877.01.T01:three_prime_UTR
AACTCTGCTTGGTCCTGTTT+GGG 0.257438 7:-83754934 MsG0780040877.01.T01:three_prime_UTR
TGCGGCTGCGGCTGCGGCTT+CGG 0.282034 7:+83755404 None:intergenic
CCCGTGATTCTCGGGATTCT+AGG 0.293289 7:-83756200 MsG0780040877.01.T01:CDS
TGGCTAATGTAATAAGAAAA+AGG 0.315290 7:+83755039 None:intergenic
TGCTTTAACTGTGGCATTGA+TGG 0.325784 7:-83756138 MsG0780040877.01.T01:CDS
CTCGGGGTTCCCGTGATTCT+CGG 0.326338 7:-83756209 MsG0780040877.01.T01:CDS
ACGAACTCGTTCCCGTGATC+TGG 0.327875 7:-83758417 MsG0780040877.01.T01:CDS
GCGCATCTCCTGGGAATGAT+AGG 0.340026 7:-83755537 MsG0780040877.01.T01:CDS
TGGGGCTGCGGCTGCGGCTG+CGG 0.348307 7:+83755398 None:intergenic
CATCCCTGGGGCTGCGGCTG+CGG 0.349340 7:+83755392 None:intergenic
GCAGCCGCAGCCGCAGCCCC+AGG 0.351705 7:-83755396 MsG0780040877.01.T01:CDS
CGAGGTCCACCTCCTGGATC+TGG 0.352495 7:-83756165 MsG0780040877.01.T01:CDS
CTATCTTCATTGTCCCTTGA+GGG 0.366692 7:+83755454 None:intergenic
CGGGATTCTAGGGAATATTT+GGG 0.369880 7:-83756189 MsG0780040877.01.T01:CDS
CACTGTAATCAGACCCATCT+TGG 0.371288 7:+83755503 None:intergenic
TAGATAATAGAAGCCGCCTT+TGG 0.372882 7:+83757259 None:intergenic
TGGGCTCGAGATTGCAAAGC+TGG 0.378836 7:-83756111 MsG0780040877.01.T01:CDS
GGGGCTCCTATCCTCATCCC+TGG 0.383826 7:+83755378 None:intergenic
CCTCGCTACGATGATAAGTA+TGG 0.384992 7:-83758473 MsG0780040877.01.T01:CDS
ACAGCCCGGCTCGCAGCTAT+AGG 0.385941 7:-83755786 MsG0780040877.01.T01:intron
CGTGATCTATCTGAAGGAAC+TGG 0.392264 7:+83755622 None:intergenic
GAGTCCTGAGCTCATTTATA+AGG 0.393196 7:+83755299 None:intergenic
CGATCCACTTTCAAAGGGTT+AGG 0.394976 7:-83758911 MsG0780040877.01.T01:five_prime_UTR
GAGCGGGTCTTCAGCAGATA+TGG 0.401178 7:-83758395 MsG0780040877.01.T01:CDS
TTGGATGGTCGCGATATTGA+TGG 0.402561 7:-83757121 MsG0780040877.01.T01:CDS
TGAATGCTTAATGATGCTTA+TGG 0.403520 7:-83755223 MsG0780040877.01.T01:three_prime_UTR
TGATGATGCAAGATACAATT+TGG 0.409460 7:-83757140 MsG0780040877.01.T01:CDS
GAAGATAGCCCTAAGGCTAA+TGG 0.412338 7:-83755439 MsG0780040877.01.T01:CDS
GGGCTCCTATCCTCATCCCT+GGG 0.414164 7:+83755379 None:intergenic
ACTGTGGCATTGATGGCCAC+TGG 0.418962 7:-83756131 MsG0780040877.01.T01:CDS
CTGCTTGGTCCTGTTTGGGT+TGG 0.420881 7:-83754930 MsG0780040877.01.T01:three_prime_UTR
CTTATTGTGGAATTTGCAAA+AGG 0.421224 7:-83757091 MsG0780040877.01.T01:CDS
CAGCCGCAGCCCCAGGGATG+AGG 0.434071 7:-83755389 MsG0780040877.01.T01:CDS
TCGGGGTTCCCGTGATTCTC+GGG 0.450465 7:-83756208 MsG0780040877.01.T01:CDS
TTTAAATCATTCAGGTTCCT+CGG 0.452728 7:-83756227 MsG0780040877.01.T01:intron
TGCTGCGCCCATTAGCCTTA+GGG 0.454836 7:+83755431 None:intergenic
TTAAATCATTCAGGTTCCTC+GGG 0.454923 7:-83756226 MsG0780040877.01.T01:intron
TTGTCATCATCCTCCTCTAC+GGG 0.456642 7:+83755358 None:intergenic
TTAAAGCAGCGTCCAGATCC+AGG 0.456838 7:+83756153 None:intergenic
ATTCCTGCTCAAAATATGTA+AGG 0.457535 7:+83757182 None:intergenic
CAATTAGAGCCTATTTGGAT+TGG 0.458440 7:+83754755 None:intergenic
GAGATTGCAAAGCTGGGGAT+TGG 0.463497 7:-83756104 MsG0780040877.01.T01:CDS
AAGATAGCCCTAAGGCTAAT+GGG 0.465291 7:-83755438 MsG0780040877.01.T01:CDS
AGATAATAGAAGCCGCCTTT+GGG 0.466011 7:+83757260 None:intergenic
TTGGGTCGAGGTCCACCTCC+TGG 0.467496 7:-83756171 MsG0780040877.01.T01:CDS
CCACATTTGTCAACTCTGCT+TGG 0.470643 7:-83754945 MsG0780040877.01.T01:three_prime_UTR
CCACAAAAGAGCGCATCTCC+TGG 0.473439 7:-83755547 MsG0780040877.01.T01:CDS
CTGTGGCATTGATGGCCACT+GGG 0.479381 7:-83756130 MsG0780040877.01.T01:CDS
CCGTGATTCTCGGGATTCTA+GGG 0.479447 7:-83756199 MsG0780040877.01.T01:CDS
AAAACCTAACCCTTTGAAAG+TGG 0.491426 7:+83758907 None:intergenic
AAAAGTAACAAAACAGGGAA+AGG 0.495167 7:+83757316 None:intergenic
GTTGTCATCATCCTCCTCTA+CGG 0.498569 7:+83755357 None:intergenic
AGAAGCCGATCCACTTTCAA+AGG 0.501384 7:-83758917 MsG0780040877.01.T01:five_prime_UTR
TATCCTCATCCCTGGGGCTG+CGG 0.503485 7:+83755386 None:intergenic
TTTCCGCAGCGTTCGAGATG+TGG 0.503829 7:-83757377 MsG0780040877.01.T01:intron
CTAGGAGAACGAGACCTGGC+TGG 0.505412 7:+83755835 None:intergenic
GGGCTCGAGATTGCAAAGCT+GGG 0.505931 7:-83756110 MsG0780040877.01.T01:CDS
CAGCCGCAGCCGCAGCCCCA+GGG 0.507597 7:-83755395 MsG0780040877.01.T01:CDS
CTGACCTATAGCTGCGAGCC+GGG 0.508221 7:+83755782 None:intergenic
CAGCCAGGTCTCGTTCTCCT+AGG 0.514139 7:-83755834 MsG0780040877.01.T01:CDS
TTATAAATGAGCTCAGGACT+CGG 0.515566 7:-83755297 MsG0780040877.01.T01:three_prime_UTR
AACAAAACATATGAATATCC+TGG 0.516284 7:+83755274 None:intergenic
AAAGTAACAAAACAGGGAAA+GGG 0.518201 7:+83757317 None:intergenic
GCAGGTCACGTTCTCCAGCC+AGG 0.518573 7:-83755849 MsG0780040877.01.T01:CDS
AGGGTGGTTGCAACCCAAGA+TGG 0.519504 7:-83755517 MsG0780040877.01.T01:CDS
TCACGGCTTCTGCCTCTCCT+AGG 0.520626 7:+83755817 None:intergenic
ACTGTAATCAGACCCATCTT+GGG 0.521356 7:+83755504 None:intergenic
TCGTTCCCGTGATCTGGAGC+GGG 0.524407 7:-83758411 MsG0780040877.01.T01:CDS
AATGAGCTCAGGACTCGGCC+AGG 0.524548 7:-83755292 MsG0780040877.01.T01:three_prime_UTR
TGGCAATACTCGCCTCTATG+TGG 0.526514 7:-83758453 MsG0780040877.01.T01:CDS
TGATGGAAGTCGTCTTATTG+TGG 0.526867 7:-83757104 MsG0780040877.01.T01:CDS
TCGACTATACTTCCTTGACT+TGG 0.532326 7:+83755585 None:intergenic
CACAAAAGAGCGCATCTCCT+GGG 0.532883 7:-83755546 MsG0780040877.01.T01:CDS
GCTATCTTCATTGTCCCTTG+AGG 0.536005 7:+83755453 None:intergenic
CTATACTTCCTTGACTTGGA+AGG 0.537488 7:+83755589 None:intergenic
CCTAGAATCCCGAGAATCAC+GGG 0.537583 7:+83756200 None:intergenic
CTCGTTCCCGTGATCTGGAG+CGG 0.539186 7:-83758412 MsG0780040877.01.T01:CDS
TATCTTCATTGTCCCTTGAG+GGG 0.543060 7:+83755455 None:intergenic
TTATTGTGGAATTTGCAAAA+GGG 0.544758 7:-83757090 MsG0780040877.01.T01:CDS
GCAGCCCCAGGGATGAGGAT+AGG 0.545596 7:-83755384 MsG0780040877.01.T01:CDS
GGGCTTCGATCTCTTCTGAC+AGG 0.550887 7:+83755643 None:intergenic
TGAAGACCCGCTCCAGATCA+CGG 0.552161 7:+83758405 None:intergenic
GGCAATACTCGCCTCTATGT+GGG 0.553412 7:-83758452 MsG0780040877.01.T01:CDS
TTCTGACAGGAGATCTTGAT+CGG 0.556640 7:+83755656 None:intergenic
CAGCGTCCAGATCCAGGAGG+TGG 0.557824 7:+83756159 None:intergenic
GGGTGGTTGCAACCCAAGAT+GGG 0.557970 7:-83755516 MsG0780040877.01.T01:CDS
TCTAGGGAATATTTGGGTCG+AGG 0.558291 7:-83756183 MsG0780040877.01.T01:CDS
ATGTTCATTGCTCTGCCCAA+AGG 0.562588 7:-83757275 MsG0780040877.01.T01:CDS
TTCCTTGACTTGGAAGGCGG+AGG 0.565604 7:+83755595 None:intergenic
CGCATCTCCTGGGAATGATA+GGG 0.566420 7:-83755536 MsG0780040877.01.T01:CDS
GGATAGGAGCCCCGTAGAGG+AGG 0.567283 7:-83755368 MsG0780040877.01.T01:CDS
GCGGCTTCTATTATCTACAC+GGG 0.567817 7:-83757253 MsG0780040877.01.T01:CDS
ACTGACCTATAGCTGCGAGC+CGG 0.569164 7:+83755781 None:intergenic
CCCTAGAATCCCGAGAATCA+CGG 0.570993 7:+83756199 None:intergenic
GAAGACCCGCTCCAGATCAC+GGG 0.572455 7:+83758406 None:intergenic
CTAACCCTTTGAAAGTGGAT+CGG 0.574194 7:+83758912 None:intergenic
TATTGTGGAATTTGCAAAAG+GGG 0.575734 7:-83757089 MsG0780040877.01.T01:intron
GAAGCCGATCCACTTTCAAA+GGG 0.576229 7:-83758916 MsG0780040877.01.T01:five_prime_UTR
AATAAGGATTGGTACCTTGG+AGG 0.577956 7:+83758875 None:intergenic
GAAGAGCAGAAGCCCCTCAA+GGG 0.580119 7:-83755467 MsG0780040877.01.T01:CDS
TGAAGAGCAGAAGCCCCTCA+AGG 0.584992 7:-83755468 MsG0780040877.01.T01:CDS
GTCCTCCGCCTTCCAAGTCA+AGG 0.589515 7:-83755597 MsG0780040877.01.T01:CDS
GTGATCTATCTGAAGGAACT+GGG 0.591868 7:+83755623 None:intergenic
TCTCCTAGGAGAACGAGACC+TGG 0.593532 7:+83755831 None:intergenic
GCAACCACCCTATCATTCCC+AGG 0.596323 7:+83755529 None:intergenic
ACAATTGTTGCAACCAACAG+AGG 0.600917 7:+83755160 None:intergenic
TACTTCCTTGACTTGGAAGG+CGG 0.601572 7:+83755592 None:intergenic
AAGACAAACGACCCACATAG+AGG 0.604217 7:+83758441 None:intergenic
CCGTGACAGAAGCTACAGCC+CGG 0.604984 7:-83755800 MsG0780040877.01.T01:CDS
GGCTCGAGATTGCAAAGCTG+GGG 0.605985 7:-83756109 MsG0780040877.01.T01:CDS
CAGTTCCTTCAGATAGATCA+CGG 0.612374 7:-83755621 MsG0780040877.01.T01:CDS
CGGCTTCTATTATCTACACG+GGG 0.614012 7:-83757252 MsG0780040877.01.T01:CDS
TCAGAAACACAAAAGCGCAT+AGG 0.614096 7:+83754881 None:intergenic
GATGCAAGATACAATTTGGA+TGG 0.614822 7:-83757136 MsG0780040877.01.T01:CDS
TTCATTGCTCTGCCCAAAGG+CGG 0.615352 7:-83757272 MsG0780040877.01.T01:CDS
TCTGGACGCTGCTTTAACTG+TGG 0.621834 7:-83756147 MsG0780040877.01.T01:CDS
GGCGGCTTCTATTATCTACA+CGG 0.623347 7:-83757254 MsG0780040877.01.T01:CDS
CCGGGCTGTAGCTTCTGTCA+CGG 0.626094 7:+83755800 None:intergenic
GGACAATGAAGATAGCCCTA+AGG 0.628195 7:-83755446 MsG0780040877.01.T01:CDS
GATATAAATAGTGAAACGCA+TGG 0.631829 7:-83758942 None:intergenic
CCAAGCAGAGTTGACAAATG+TGG 0.634207 7:+83754945 None:intergenic
AGGTCTCGTTCTCCTAGGAG+AGG 0.635451 7:-83755829 MsG0780040877.01.T01:CDS
ATCTCCTGGGAATGATAGGG+TGG 0.637023 7:-83755533 MsG0780040877.01.T01:CDS
GGACTCCGTGATCTATCTGA+AGG 0.639588 7:+83755616 None:intergenic
GATGGGTCTGATTACAGTGA+TGG 0.645059 7:-83755499 MsG0780040877.01.T01:CDS
TGAGGATAGGAGCCCCGTAG+AGG 0.657043 7:-83755371 MsG0780040877.01.T01:CDS
AGGGTAAGAACTTACAACAA+AGG 0.661425 7:+83757336 None:intergenic
GGGTCTTCAGCAGATATGGA+AGG 0.663027 7:-83758391 MsG0780040877.01.T01:intron
GGCTCCTATCCTCATCCCTG+GGG 0.667502 7:+83755380 None:intergenic
AAGTATAGTCGATCTCCTGA+AGG 0.670998 7:-83755574 MsG0780040877.01.T01:CDS
TAAATCATTCAGGTTCCTCG+GGG 0.679098 7:-83756225 MsG0780040877.01.T01:intron
CTTGCATCATCAGCATCTCG+AGG 0.683904 7:+83757151 None:intergenic
TGTCATCATCCTCCTCTACG+GGG 0.697101 7:+83755359 None:intergenic
CTTTGCAATCTCGAGCCCAG+TGG 0.704739 7:+83756115 None:intergenic
ATGCTTATGGTTATGAACAA+CGG 0.706115 7:-83755210 MsG0780040877.01.T01:three_prime_UTR
CCATACTTATCATCGTAGCG+AGG 0.710626 7:+83758473 None:intergenic
CGAGAATCACGGGAACCCCG+AGG 0.735565 7:+83756210 None:intergenic
AAGCAGCGTCCAGATCCAGG+AGG 0.786991 7:+83756156 None:intergenic
GGCTTCTATTATCTACACGG+GGG 0.798014 7:-83757251 MsG0780040877.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GGAAAAATAAAAAATTAAAT+GGG + Chr7:83754891-83754910 None:intergenic 10.0%
!! TGGAAAAATAAAAAATTAAA+TGG + Chr7:83754892-83754911 None:intergenic 10.0%
!!! TTAATTTTTTATTTTTCCAT+CGG - Chr7:83754893-83754912 MsG0780040877.01.T01:three_prime_UTR 10.0%
!! AAAAGCCTAAATATATATTA+TGG + Chr7:83757057-83757076 None:intergenic 15.0%
!! AAATAAAAAAGTAACAAAAC+AGG + Chr7:83756393-83756412 None:intergenic 15.0%
!! AACAAAAATTGTTCAAATAA+AGG + Chr7:83756965-83756984 None:intergenic 15.0%
!! AATAAAAAAGTAACAAAACA+GGG + Chr7:83756392-83756411 None:intergenic 15.0%
!! ATAAAAAATTAAATGGGAAT+AGG + Chr7:83754885-83754904 None:intergenic 15.0%
!! TTTCAAATATAAGCAAAAAT+TGG - Chr7:83756847-83756866 MsG0780040877.01.T01:intron 15.0%
!!! ATTTAACTTTGTAAATTTCA+AGG - Chr7:83757181-83757200 MsG0780040877.01.T01:CDS 15.0%
!!! TAATTTTAGTACTTTGATTT+TGG - Chr7:83758729-83758748 MsG0780040877.01.T01:intron 15.0%
!!! TATGAATTTTGTTCAAAATT+AGG - Chr7:83756926-83756945 MsG0780040877.01.T01:intron 15.0%
!!! TGTTCTTTTAAATTTCTATT+GGG - Chr7:83757127-83757146 MsG0780040877.01.T01:CDS 15.0%
!!! TTTAACTTTGTAAATTTCAA+GGG - Chr7:83757182-83757201 MsG0780040877.01.T01:CDS 15.0%
!!! TTTTTGTTTTTATTTGATTC+CGG - Chr7:83756977-83756996 MsG0780040877.01.T01:intron 15.0%
!! ATAAGGAAAAATACTTCTTA+AGG + Chr7:83758387-83758406 None:intergenic 20.0%
!! ATAGGAAAATGAAATTGAAT+TGG + Chr7:83754867-83754886 None:intergenic 20.0%
!! ATCAAATTTAAATCGAAAAC+CGG + Chr7:83755011-83755030 None:intergenic 20.0%
!! ATTAAGCATTCAAAAAAAGA+TGG + Chr7:83758469-83758488 None:intergenic 20.0%
!! GAATAAATTAAGATTACAGT+TGG + Chr7:83757717-83757736 None:intergenic 20.0%
!! GAGACATATAACAAAAAAAA+AGG + Chr7:83756668-83756687 None:intergenic 20.0%
!! TACTGCCATAATATATATTT+AGG - Chr7:83757049-83757068 MsG0780040877.01.T01:intron 20.0%
!! TAGGAAAATGAAATTGAATT+GGG + Chr7:83754866-83754885 None:intergenic 20.0%
!! TTAACTTTGTAAATTTCAAG+GGG - Chr7:83757183-83757202 MsG0780040877.01.T01:CDS 20.0%
!! TTACTTATAAGCTGAAAATT+GGG - Chr7:83758003-83758022 MsG0780040877.01.T01:intron 20.0%
!! TTGACCAAATTCATAAAATT+TGG + Chr7:83756897-83756916 None:intergenic 20.0%
!! TTTACTTATAAGCTGAAAAT+TGG - Chr7:83758002-83758021 MsG0780040877.01.T01:intron 20.0%
!!! AATGAAAAATAGTGCTATTA+TGG - Chr7:83758683-83758702 MsG0780040877.01.T01:intron 20.0%
!!! ATAATAGCACTATTTTTCAT+TGG + Chr7:83758684-83758703 None:intergenic 20.0%
!!! ATAATTTTCCATTCATAAAC+TGG + Chr7:83755551-83755570 None:intergenic 20.0%
!!! ATGCTCGTAATTTTTTTTTT+GGG - Chr7:83755067-83755086 MsG0780040877.01.T01:three_prime_UTR 20.0%
!!! CTGTTCTTTTAAATTTCTAT+TGG - Chr7:83757126-83757145 MsG0780040877.01.T01:CDS 20.0%
!!! TCTGTTGTCTTTTATTTTTA+TGG - Chr7:83757347-83757366 MsG0780040877.01.T01:CDS 20.0%
!!! TCTTTTATAATTAGCTTTCA+AGG - Chr7:83756686-83756705 MsG0780040877.01.T01:intron 20.0%
!!! TGCTTATATTTGAAATCAAA+AGG + Chr7:83756842-83756861 None:intergenic 20.0%
!!! TTAAATTTTTAAACCTCTGT+TGG - Chr7:83758527-83758546 MsG0780040877.01.T01:intron 20.0%
!!! TTTTTTAACCAGTTTATGAA+TGG - Chr7:83755540-83755559 MsG0780040877.01.T01:CDS 20.0%
! AAAAATACTTCTTAAGGTGA+TGG + Chr7:83758381-83758400 None:intergenic 25.0%
! AAAAGACAAAAATTGCATAG+AGG + Chr7:83755398-83755417 None:intergenic 25.0%
! AAATTGAAATCATCAGTTGA+AGG + Chr7:83757784-83757803 None:intergenic 25.0%
! AACAAAACATATGAATATCC+TGG + Chr7:83758429-83758448 None:intergenic 25.0%
! AACTTAAATGATCTTGTTGA+AGG - Chr7:83756059-83756078 MsG0780040877.01.T01:intron 25.0%
! AATAAGTTGTTTATCCAAAC+AGG + Chr7:83755651-83755670 None:intergenic 25.0%
! AGGAAAATGAAATTGAATTG+GGG + Chr7:83754865-83754884 None:intergenic 25.0%
! ATACTCGTCAAATATATACA+TGG + Chr7:83756788-83756807 None:intergenic 25.0%
! ATGCAATCAATAATTGAATC+TGG + Chr7:83755184-83755203 None:intergenic 25.0%
! CAAAAAAAAAATTACGAGCA+TGG + Chr7:83755068-83755087 None:intergenic 25.0%
! CCAATTTAAACAATTGTGAA+TGG + Chr7:83755370-83755389 None:intergenic 25.0%
! CCATTCACAATTGTTTAAAT+TGG - Chr7:83755367-83755386 MsG0780040877.01.T01:CDS 25.0%
! TAACTTTGTAAATTTCAAGG+GGG - Chr7:83757184-83757203 MsG0780040877.01.T01:CDS 25.0%
! TATAAGCAAAAATTGGTCAA+AGG - Chr7:83756854-83756873 MsG0780040877.01.T01:intron 25.0%
! TCAAAGGAAGTTTATGAATT+TGG - Chr7:83756870-83756889 MsG0780040877.01.T01:intron 25.0%
! TCAAATAAAGGTGATGAATT+TGG + Chr7:83756953-83756972 None:intergenic 25.0%
! TCATAAACTGGTTAAAAAAC+TGG + Chr7:83755539-83755558 None:intergenic 25.0%
! TGCAATCAATAATTGAATCT+GGG + Chr7:83755183-83755202 None:intergenic 25.0%
! TGGCTAATGTAATAAGAAAA+AGG + Chr7:83758664-83758683 None:intergenic 25.0%
! TTACTTTATGACAACATTGT+TGG - Chr7:83757324-83757343 MsG0780040877.01.T01:CDS 25.0%
! TTATTGTGGAATTTGCAAAA+GGG - Chr7:83756610-83756629 MsG0780040877.01.T01:intron 25.0%
!! TGGTCCAAATTTTATGAATT+TGG - Chr7:83756890-83756909 MsG0780040877.01.T01:intron 25.0%
!!! AATGTTATTGCGTGTTTTTA+TGG - Chr7:83756196-83756215 MsG0780040877.01.T01:CDS 25.0%
!!! AGGAGTTTTTTTGTTTTGTT+TGG - Chr7:83756706-83756725 MsG0780040877.01.T01:intron 25.0%
!!! CATGCTCGTAATTTTTTTTT+TGG - Chr7:83755066-83755085 MsG0780040877.01.T01:three_prime_UTR 25.0%
!!! CATGTTGCTATTTTTCTTTT+GGG - Chr7:83757449-83757468 MsG0780040877.01.T01:intron 25.0%
!!! TCATGTTGCTATTTTTCTTT+TGG - Chr7:83757448-83757467 MsG0780040877.01.T01:intron 25.0%
AAAAGTAACAAAACAGGGAA+AGG + Chr7:83756387-83756406 None:intergenic 30.0%
AAAGTAACAAAACAGGGAAA+GGG + Chr7:83756386-83756405 None:intergenic 30.0%
AAAGTCTTCTTTCATCTTCA+AGG + Chr7:83757159-83757178 None:intergenic 30.0%
AAAGTTAGGGGAAAATATAC+AGG - Chr7:83755948-83755967 MsG0780040877.01.T01:intron 30.0%
AAGTCTTCTTTCATCTTCAA+GGG + Chr7:83757158-83757177 None:intergenic 30.0%
AAGTTAAAAATGACACCTGT+GGG + Chr7:83756044-83756063 None:intergenic 30.0%
AATGGTTTCCATAAACAGTA+AGG + Chr7:83756305-83756324 None:intergenic 30.0%
AGAACAGTCCAAAAAAATTG+AGG - Chr7:83757671-83757690 MsG0780040877.01.T01:intron 30.0%
ATGCTTATGGTTATGAACAA+CGG - Chr7:83758490-83758509 MsG0780040877.01.T01:exon 30.0%
ATTCCTGCTCAAAATATGTA+AGG + Chr7:83756521-83756540 None:intergenic 30.0%
ATTGCAACAATGCTTTCTAA+TGG - Chr7:83757748-83757767 MsG0780040877.01.T01:intron 30.0%
ATTGGGAATGGAATGATTAA+AGG + Chr7:83754958-83754977 None:intergenic 30.0%
CAACATGATCAGAAATACTA+GGG + Chr7:83757436-83757455 None:intergenic 30.0%
CTTATTGTGGAATTTGCAAA+AGG - Chr7:83756609-83756628 MsG0780040877.01.T01:intron 30.0%
TAAGTTAAAAATGACACCTG+TGG + Chr7:83756045-83756064 None:intergenic 30.0%
TATTGTGGAATTTGCAAAAG+GGG - Chr7:83756611-83756630 MsG0780040877.01.T01:intron 30.0%
TCGTCAAATATATACATGGA+TGG + Chr7:83756784-83756803 None:intergenic 30.0%
TGAATGCTTAATGATGCTTA+TGG - Chr7:83758477-83758496 MsG0780040877.01.T01:CDS 30.0%
TTAAAGGGTGAATCAATTGA+AGG + Chr7:83754942-83754961 None:intergenic 30.0%
TTATGCTTTACTTTGACTGT+TGG - Chr7:83757377-83757396 MsG0780040877.01.T01:intron 30.0%
TTCCAGTAGTTAAGTAATGA+TGG - Chr7:83756279-83756298 MsG0780040877.01.T01:intron 30.0%
TTCCCCTAACTTTAGATATA+GGG + Chr7:83755941-83755960 None:intergenic 30.0%
TTGGGAATGGAATGATTAAA+GGG + Chr7:83754957-83754976 None:intergenic 30.0%
TTTCATAAGTTCTCCAACAT+AGG + Chr7:83755806-83755825 None:intergenic 30.0%
TTTCCCCTAACTTTAGATAT+AGG + Chr7:83755942-83755961 None:intergenic 30.0%
! ATCTTCTCTTTTTCTCTTGA+TGG + Chr7:83755122-83755141 None:intergenic 30.0%
! ATGATCTTGTTGAAGGTTTT+TGG - Chr7:83756066-83756085 MsG0780040877.01.T01:intron 30.0%
! TGATCTTGTTGAAGGTTTTT+GGG - Chr7:83756067-83756086 MsG0780040877.01.T01:intron 30.0%
! TGATGATGCAAGATACAATT+TGG - Chr7:83756560-83756579 MsG0780040877.01.T01:intron 30.0%
! TTTAAATCATTCAGGTTCCT+CGG - Chr7:83757473-83757492 MsG0780040877.01.T01:intron 30.0%
! TTTTCCTTATAAATGAGCTC+AGG - Chr7:83758397-83758416 MsG0780040877.01.T01:CDS 30.0%
!! AGTTCACTATTCTTGCTTTT+TGG - Chr7:83757097-83757116 MsG0780040877.01.T01:CDS 30.0%
!! ATAGTATTGGCAATTTGCAA+GGG - Chr7:83757002-83757021 MsG0780040877.01.T01:intron 30.0%
!! ATTGCGTGTTTTTATGGAAT+TGG - Chr7:83756202-83756221 MsG0780040877.01.T01:CDS 30.0%
!! GTTGTTTTCATAACCTATGT+TGG - Chr7:83755790-83755809 MsG0780040877.01.T01:CDS 30.0%
!!! TTCTTTCCAAGCTTTGTTTT+GGG - Chr7:83755971-83755990 MsG0780040877.01.T01:intron 30.0%
!!! TTTTGGGCTTTAAATCATTC+AGG - Chr7:83757465-83757484 MsG0780040877.01.T01:intron 30.0%
AAAAAAATTGAGGTAGGCCA+TGG - Chr7:83757681-83757700 MsG0780040877.01.T01:intron 35.0%
AACCTAGCTAGATTAGTGAT+AGG - Chr7:83755597-83755616 MsG0780040877.01.T01:CDS 35.0%
AACCTATCACTAATCTAGCT+AGG + Chr7:83755602-83755621 None:intergenic 35.0%
AAGGGGTAGGAATTAATTTC+CGG - Chr7:83756628-83756647 MsG0780040877.01.T01:intron 35.0%
AATTGGCAACAATCACAAAC+TGG - Chr7:83756219-83756238 MsG0780040877.01.T01:intron 35.0%
ACAAACCGATCGATGAAATT+GGG + Chr7:83754982-83755001 None:intergenic 35.0%
AGAGAGAAGAGAATAAGGAT+TGG + Chr7:83754839-83754858 None:intergenic 35.0%
AGCTAGATTAGTGATAGGTT+TGG - Chr7:83755602-83755621 MsG0780040877.01.T01:CDS 35.0%
AGGGTAAGAACTTACAACAA+AGG + Chr7:83756367-83756386 None:intergenic 35.0%
ATGAAATTGGGAATTGGGAA+TGG + Chr7:83754970-83754989 None:intergenic 35.0%
ATTACACCAAGATTACACCA+AGG + Chr7:83756130-83756149 None:intergenic 35.0%
CAAATTGCCAATACTATCTC+CGG + Chr7:83756999-83757018 None:intergenic 35.0%
CAATTCCCAATTTCATCGAT+CGG - Chr7:83754974-83754993 MsG0780040877.01.T01:three_prime_UTR 35.0%
CAGTCCAAAAAAATTGAGGT+AGG - Chr7:83757675-83757694 MsG0780040877.01.T01:intron 35.0%
CTTTAGATATAGGGCCTATT+TGG + Chr7:83755932-83755951 None:intergenic 35.0%
GATCGATGAAATTGGGAATT+GGG + Chr7:83754975-83754994 None:intergenic 35.0%
GATGCAAGATACAATTTGGA+TGG - Chr7:83756564-83756583 MsG0780040877.01.T01:intron 35.0%
GCAACATGATCAGAAATACT+AGG + Chr7:83757437-83757456 None:intergenic 35.0%
GGAAAAGAGAGAAGAGAATA+AGG + Chr7:83754844-83754863 None:intergenic 35.0%
GGTTTACTAGCGCTTTATAA+TGG - Chr7:83757205-83757224 MsG0780040877.01.T01:CDS 35.0%
TACAAACCGATCGATGAAAT+TGG + Chr7:83754983-83755002 None:intergenic 35.0%
TCTCATTCCTAGACTATTAG+AGG - Chr7:83755472-83755491 MsG0780040877.01.T01:CDS 35.0%
TTATAAATGAGCTCAGGACT+CGG - Chr7:83758403-83758422 MsG0780040877.01.T01:CDS 35.0%
TTATACCTCATGTTATGCGT+GGG - Chr7:83756010-83756029 MsG0780040877.01.T01:intron 35.0%
TTATGCTGCTATATAGCAAG+AGG + Chr7:83757255-83757274 None:intergenic 35.0%
TTATTTGCAGCTTATAGCAC+AGG - Chr7:83755666-83755685 MsG0780040877.01.T01:intron 35.0%
TTTGATTCCGGAGATAGTAT+TGG - Chr7:83756989-83757008 MsG0780040877.01.T01:intron 35.0%
! AAAACCTAACCCTTTGAAAG+TGG + Chr7:83754796-83754815 None:intergenic 35.0%
! AAAGGTGTAATAAGTACAGC+CGG + Chr7:83756650-83756669 None:intergenic 35.0%
! AATGATGGCCTTACTGTTTA+TGG - Chr7:83756294-83756313 MsG0780040877.01.T01:intron 35.0%
! AGGCCCTATATCTAAAGTTA+GGG - Chr7:83755935-83755954 MsG0780040877.01.T01:intron 35.0%
! CTTTCAAAGGGTTAGGTTTT+CGG - Chr7:83754796-83754815 MsG0780040877.01.T01:three_prime_UTR 35.0%
! TAGGCCCTATATCTAAAGTT+AGG - Chr7:83755934-83755953 MsG0780040877.01.T01:intron 35.0%
! TGGTGTAATCTTGGTGTAAT+TGG - Chr7:83756130-83756149 MsG0780040877.01.T01:CDS 35.0%
! TGTAATCTTGGTGTAATTGG+TGG - Chr7:83756133-83756152 MsG0780040877.01.T01:CDS 35.0%
! TTAAATCATTCAGGTTCCTC+GGG - Chr7:83757474-83757493 MsG0780040877.01.T01:intron 35.0%
! TTTTGGGCTTGGATTTATGT+TGG - Chr7:83755987-83756006 MsG0780040877.01.T01:intron 35.0%
!! GATAGTATTGGCAATTTGCA+AGG - Chr7:83757001-83757020 MsG0780040877.01.T01:intron 35.0%
!! GTTCCTTACATATTTTGAGC+AGG - Chr7:83756515-83756534 MsG0780040877.01.T01:intron 35.0%
!! TAGTGAACTCTAAGACACTA+AGG + Chr7:83757086-83757105 None:intergenic 35.0%
!!! ATGGCCTACCTCAATTTTTT+TGG + Chr7:83757682-83757701 None:intergenic 35.0%
!!! GTTCTTTCCAAGCTTTGTTT+TGG - Chr7:83755970-83755989 MsG0780040877.01.T01:intron 35.0%
!!! TTTTGGGTTTTCACTAAACC+CGG - Chr7:83756083-83756102 MsG0780040877.01.T01:intron 35.0%
AAAAACAAGCCAACCCAAAC+AGG + Chr7:83758782-83758801 None:intergenic 40.0%
AAAATGACACCTGTGGGATA+CGG + Chr7:83756038-83756057 None:intergenic 40.0%
AAGATAGCCCTAAGGCTAAT+GGG - Chr7:83758262-83758281 MsG0780040877.01.T01:intron 40.0%
AAGTATAGTCGATCTCCTGA+AGG - Chr7:83758126-83758145 MsG0780040877.01.T01:intron 40.0%
AATCCGACAAACACAAGGTT+TGG + Chr7:83755503-83755522 None:intergenic 40.0%
ACAATTGTTGCAACCAACAG+AGG + Chr7:83758543-83758562 None:intergenic 40.0%
ACTGTAATCAGACCCATCTT+GGG + Chr7:83758199-83758218 None:intergenic 40.0%
AGATAATAGAAGCCGCCTTT+GGG + Chr7:83756443-83756462 None:intergenic 40.0%
ATCCCAAACCTTGTGTTTGT+CGG - Chr7:83755497-83755516 MsG0780040877.01.T01:CDS 40.0%
ATCCGACAAACACAAGGTTT+GGG + Chr7:83755502-83755521 None:intergenic 40.0%
ATGAGATACACAACCAGACA+TGG + Chr7:83755458-83755477 None:intergenic 40.0%
ATTAGTGATAGGTTTGGCCT+GGG - Chr7:83755608-83755627 MsG0780040877.01.T01:CDS 40.0%
CAGTTCCTTCAGATAGATCA+CGG - Chr7:83758079-83758098 MsG0780040877.01.T01:intron 40.0%
CATGCAATTACAAGATCCGA+TGG + Chr7:83754912-83754931 None:intergenic 40.0%
CGATCGATGAAATTGGGAAT+TGG + Chr7:83754976-83754995 None:intergenic 40.0%
CTAGCGCTTTATAATGGCTT+TGG - Chr7:83757211-83757230 MsG0780040877.01.T01:CDS 40.0%
CTATCTTCATTGTCCCTTGA+GGG + Chr7:83758249-83758268 None:intergenic 40.0%
GAACAAATCCGACAAACACA+AGG + Chr7:83755508-83755527 None:intergenic 40.0%
GAGTCCTGAGCTCATTTATA+AGG + Chr7:83758404-83758423 None:intergenic 40.0%
GATATAGGGCCTATTTGGAT+TGG + Chr7:83755927-83755946 None:intergenic 40.0%
GGCCATCATTACTTAACTAC+TGG + Chr7:83756284-83756303 None:intergenic 40.0%
GTGATCTATCTGAAGGAACT+GGG + Chr7:83758080-83758099 None:intergenic 40.0%
GTTATACCTCATGTTATGCG+TGG - Chr7:83756009-83756028 MsG0780040877.01.T01:intron 40.0%
GTTCTATCACATTCCATGTC+TGG - Chr7:83755442-83755461 MsG0780040877.01.T01:CDS 40.0%
TAGATAATAGAAGCCGCCTT+TGG + Chr7:83756444-83756463 None:intergenic 40.0%
TATCTTCATTGTCCCTTGAG+GGG + Chr7:83758248-83758267 None:intergenic 40.0%
TCAACTACGCCAATCCAAAT+AGG - Chr7:83755915-83755934 MsG0780040877.01.T01:intron 40.0%
TCGACTATACTTCCTTGACT+TGG + Chr7:83758118-83758137 None:intergenic 40.0%
TTCTGACAGGAGATCTTGAT+CGG + Chr7:83758047-83758066 None:intergenic 40.0%
! AATAAGGATTGGTACCTTGG+AGG + Chr7:83754828-83754847 None:intergenic 40.0%
! CGGGATTCTAGGGAATATTT+GGG - Chr7:83757511-83757530 MsG0780040877.01.T01:intron 40.0%
! CTAAAGCATCAGCATTAGAC+AGG + Chr7:83756737-83756756 None:intergenic 40.0%
! CTAACCCTTTGAAAGTGGAT+CGG + Chr7:83754791-83754810 None:intergenic 40.0%
! GAGAATAAGGATTGGTACCT+TGG + Chr7:83754831-83754850 None:intergenic 40.0%
! GGCCCTATATCTAAAGTTAG+GGG - Chr7:83755936-83755955 MsG0780040877.01.T01:intron 40.0%
! GGTGTTTAGTTCGTCTTTGA+GGG - Chr7:83756240-83756259 MsG0780040877.01.T01:intron 40.0%
! GTGTTTAGTTCGTCTTTGAG+GGG - Chr7:83756241-83756260 MsG0780040877.01.T01:intron 40.0%
! TAAATCATTCAGGTTCCTCG+GGG - Chr7:83757475-83757494 MsG0780040877.01.T01:intron 40.0%
! TCAGAAACACAAAAGCGCAT+AGG + Chr7:83758822-83758841 None:intergenic 40.0%
! TCGGGATTCTAGGGAATATT+TGG - Chr7:83757510-83757529 MsG0780040877.01.T01:intron 40.0%
! TGATGGAAGTCGTCTTATTG+TGG - Chr7:83756596-83756615 MsG0780040877.01.T01:intron 40.0%
! TGCTTTAACTGTGGCATTGA+TGG - Chr7:83757562-83757581 MsG0780040877.01.T01:intron 40.0%
! TGGTGTTTAGTTCGTCTTTG+AGG - Chr7:83756239-83756258 MsG0780040877.01.T01:intron 40.0%
!! CTATACTTCCTTGACTTGGA+AGG + Chr7:83758114-83758133 None:intergenic 40.0%
!! TCGATCGGTTTGTATTTCTC+CGG - Chr7:83754989-83755008 MsG0780040877.01.T01:three_prime_UTR 40.0%
AACTCTGCTTGGTCCTGTTT+GGG - Chr7:83758766-83758785 MsG0780040877.01.T01:intron 45.0%
AAGAACAAGTGTTACCGCTG+TGG - Chr7:83757619-83757638 MsG0780040877.01.T01:intron 45.0%
AAGACAAACGACCCACATAG+AGG + Chr7:83755262-83755281 None:intergenic 45.0%
AATCGCCAAAGTCAACACTC+AGG + Chr7:83756168-83756187 None:intergenic 45.0%
AGAACAAGTGTTACCGCTGT+GGG - Chr7:83757620-83757639 MsG0780040877.01.T01:intron 45.0%
AGAAGCCGATCCACTTTCAA+AGG - Chr7:83754783-83754802 MsG0780040877.01.T01:three_prime_UTR 45.0%
ATGTTCATTGCTCTGCCCAA+AGG - Chr7:83756425-83756444 MsG0780040877.01.T01:intron 45.0%
CAAAGTGACACAAGGAGACA+TGG + Chr7:83755576-83755595 None:intergenic 45.0%
CACTGTAATCAGACCCATCT+TGG + Chr7:83758200-83758219 None:intergenic 45.0%
CCAAGCAGAGTTGACAAATG+TGG + Chr7:83758758-83758777 None:intergenic 45.0%
CCACATTTGTCAACTCTGCT+TGG - Chr7:83758755-83758774 MsG0780040877.01.T01:intron 45.0%
CCATACTTATCATCGTAGCG+AGG + Chr7:83755230-83755249 None:intergenic 45.0%
CCTCGCTACGATGATAAGTA+TGG - Chr7:83755227-83755246 MsG0780040877.01.T01:three_prime_UTR 45.0%
CGATCCACTTTCAAAGGGTT+AGG - Chr7:83754789-83754808 MsG0780040877.01.T01:three_prime_UTR 45.0%
CGGCTTCTATTATCTACACG+GGG - Chr7:83756448-83756467 MsG0780040877.01.T01:intron 45.0%
CGTGATCTATCTGAAGGAAC+TGG + Chr7:83758081-83758100 None:intergenic 45.0%
CTAGGTTGCAAAGTGACACA+AGG + Chr7:83755584-83755603 None:intergenic 45.0%
GAAGATAGCCCTAAGGCTAA+TGG - Chr7:83758261-83758280 MsG0780040877.01.T01:intron 45.0%
GAAGCCGATCCACTTTCAAA+GGG - Chr7:83754784-83754803 MsG0780040877.01.T01:three_prime_UTR 45.0%
GATGGGTCTGATTACAGTGA+TGG - Chr7:83758201-83758220 MsG0780040877.01.T01:intron 45.0%
GATTAGTGATAGGTTTGGCC+TGG - Chr7:83755607-83755626 MsG0780040877.01.T01:CDS 45.0%
GCGGCTTCTATTATCTACAC+GGG - Chr7:83756447-83756466 MsG0780040877.01.T01:intron 45.0%
GCTATCTTCATTGTCCCTTG+AGG + Chr7:83758250-83758269 None:intergenic 45.0%
GGACAATGAAGATAGCCCTA+AGG - Chr7:83758254-83758273 MsG0780040877.01.T01:intron 45.0%
GGCGGCTTCTATTATCTACA+CGG - Chr7:83756446-83756465 MsG0780040877.01.T01:intron 45.0%
GGCTTCTATTATCTACACGG+GGG - Chr7:83756449-83756468 MsG0780040877.01.T01:intron 45.0%
GGGATCTCCTCTAATAGTCT+AGG + Chr7:83755482-83755501 None:intergenic 45.0%
GTGGAATTTGCAAAAGGGGT+AGG - Chr7:83756615-83756634 MsG0780040877.01.T01:intron 45.0%
GTTGTCATCATCCTCCTCTA+CGG + Chr7:83758346-83758365 None:intergenic 45.0%
TCCAAGCCCAAAACAAAGCT+TGG + Chr7:83755980-83755999 None:intergenic 45.0%
TCTAGGGAATATTTGGGTCG+AGG - Chr7:83757517-83757536 MsG0780040877.01.T01:intron 45.0%
TTAGTGATAGGTTTGGCCTG+GGG - Chr7:83755609-83755628 MsG0780040877.01.T01:CDS 45.0%
TTGGATGGTCGCGATATTGA+TGG - Chr7:83756579-83756598 MsG0780040877.01.T01:intron 45.0%
TTGTCATCATCCTCCTCTAC+GGG + Chr7:83758345-83758364 None:intergenic 45.0%
!! TACTTCCTTGACTTGGAAGG+CGG + Chr7:83758111-83758130 None:intergenic 45.0%
!! TCCTACCTGAGTGTTGACTT+TGG - Chr7:83756160-83756179 MsG0780040877.01.T01:CDS 45.0%
!!! TCCAAGCTTTGTTTTGGGCT+TGG - Chr7:83755976-83755995 MsG0780040877.01.T01:intron 45.0%
ATCTCCTGGGAATGATAGGG+TGG - Chr7:83758167-83758186 MsG0780040877.01.T01:intron 50.0%
ATTGAGGTAGGCCATGGTGT+TGG - Chr7:83757687-83757706 MsG0780040877.01.T01:intron 50.0%
CAACTCTGCTTGGTCCTGTT+TGG - Chr7:83758765-83758784 MsG0780040877.01.T01:intron 50.0%
CACGGGGGAGTTCAATTATG+CGG - Chr7:83756464-83756483 MsG0780040877.01.T01:intron 50.0%
CCCTAGAATCCCGAGAATCA+CGG + Chr7:83757504-83757523 None:intergenic 50.0%
CCGTGATTCTCGGGATTCTA+GGG - Chr7:83757501-83757520 MsG0780040877.01.T01:intron 50.0%
CCTAGAATCCCGAGAATCAC+GGG + Chr7:83757503-83757522 None:intergenic 50.0%
CGCATCTCCTGGGAATGATA+GGG - Chr7:83758164-83758183 MsG0780040877.01.T01:intron 50.0%
CTTGCATCATCAGCATCTCG+AGG + Chr7:83756552-83756571 None:intergenic 50.0%
GAACAAGTGTTACCGCTGTG+GGG - Chr7:83757621-83757640 MsG0780040877.01.T01:intron 50.0%
GAGATTGCAAAGCTGGGGAT+TGG - Chr7:83757596-83757615 MsG0780040877.01.T01:intron 50.0%
GCCAAAGTCAACACTCAGGT+AGG + Chr7:83756164-83756183 None:intergenic 50.0%
GGACTCCGTGATCTATCTGA+AGG + Chr7:83758087-83758106 None:intergenic 50.0%
GGCAATACTCGCCTCTATGT+GGG - Chr7:83755248-83755267 MsG0780040877.01.T01:three_prime_UTR 50.0%
GGGTCTTCAGCAGATATGGA+AGG - Chr7:83755309-83755328 MsG0780040877.01.T01:three_prime_UTR 50.0%
TATCCACATCTCGAACGCTG+CGG + Chr7:83756329-83756348 None:intergenic 50.0%
TGGCAATACTCGCCTCTATG+TGG - Chr7:83755247-83755266 MsG0780040877.01.T01:three_prime_UTR 50.0%
TGTCATCATCCTCCTCTACG+GGG + Chr7:83758344-83758363 None:intergenic 50.0%
TTAAAGCAGCGTCCAGATCC+AGG + Chr7:83757550-83757569 None:intergenic 50.0%
TTCATTGCTCTGCCCAAAGG+CGG - Chr7:83756428-83756447 MsG0780040877.01.T01:intron 50.0%
TTGAGGTAGGCCATGGTGTT+GGG - Chr7:83757688-83757707 MsG0780040877.01.T01:intron 50.0%
! CACAAAAGAGCGCATCTCCT+GGG - Chr7:83758154-83758173 MsG0780040877.01.T01:intron 50.0%
! CGAAGTGTTTCACGTTCTCC+AGG - Chr7:83757829-83757848 MsG0780040877.01.T01:intron 50.0%
! GTTTTCGGCAATCTCCTCCA+AGG - Chr7:83754811-83754830 MsG0780040877.01.T01:three_prime_UTR 50.0%
! TCTGGACGCTGCTTTAACTG+TGG - Chr7:83757553-83757572 MsG0780040877.01.T01:intron 50.0%
! TGGGTTTTCACTAAACCCGG+AGG - Chr7:83756086-83756105 MsG0780040877.01.T01:CDS 50.0%
!! CTCTTTTGTGGACTGCCTTC+AGG + Chr7:83758144-83758163 None:intergenic 50.0%
ACGAACTCGTTCCCGTGATC+TGG - Chr7:83755283-83755302 MsG0780040877.01.T01:three_prime_UTR 55.0%
ACTGACCTATAGCTGCGAGC+CGG + Chr7:83757922-83757941 None:intergenic 55.0%
AGGGTGGTTGCAACCCAAGA+TGG - Chr7:83758183-83758202 MsG0780040877.01.T01:intron 55.0%
AGGTCTCGTTCTCCTAGGAG+AGG - Chr7:83757871-83757890 MsG0780040877.01.T01:intron 55.0%
CAGTTGGAACCCCAACACCA+TGG + Chr7:83757701-83757720 None:intergenic 55.0%
CATCTCGAACGCTGCGGAAA+TGG + Chr7:83756323-83756342 None:intergenic 55.0%
CCAAACAGGCCCACAGACAA+TGG + Chr7:83755637-83755656 None:intergenic 55.0%
CCATTGTCTGTGGGCCTGTT+TGG - Chr7:83755634-83755653 MsG0780040877.01.T01:CDS 55.0%
CCCGTGATTCTCGGGATTCT+AGG - Chr7:83757500-83757519 MsG0780040877.01.T01:intron 55.0%
CGGTTCCCACGCATAACATG+AGG + Chr7:83756018-83756037 None:intergenic 55.0%
CTGCTTGGTCCTGTTTGGGT+TGG - Chr7:83758770-83758789 MsG0780040877.01.T01:intron 55.0%
CTTTGCAATCTCGAGCCCAG+TGG + Chr7:83757588-83757607 None:intergenic 55.0%
GAAGAGCAGAAGCCCCTCAA+GGG - Chr7:83758233-83758252 MsG0780040877.01.T01:intron 55.0%
GACAGGAGATCTTGATCGGC+TGG + Chr7:83758043-83758062 None:intergenic 55.0%
GAGCGGGTCTTCAGCAGATA+TGG - Chr7:83755305-83755324 MsG0780040877.01.T01:three_prime_UTR 55.0%
GCAACCACCCTATCATTCCC+AGG + Chr7:83758174-83758193 None:intergenic 55.0%
GCGCATCTCCTGGGAATGAT+AGG - Chr7:83758163-83758182 MsG0780040877.01.T01:intron 55.0%
GGCTCGAGATTGCAAAGCTG+GGG - Chr7:83757591-83757610 MsG0780040877.01.T01:intron 55.0%
GGGCTCGAGATTGCAAAGCT+GGG - Chr7:83757590-83757609 MsG0780040877.01.T01:intron 55.0%
GGGCTTCGATCTCTTCTGAC+AGG + Chr7:83758060-83758079 None:intergenic 55.0%
GGGTGGTTGCAACCCAAGAT+GGG - Chr7:83758184-83758203 MsG0780040877.01.T01:intron 55.0%
GTGTTTCACGTTCTCCAGGC+AGG - Chr7:83757833-83757852 MsG0780040877.01.T01:intron 55.0%
TAAACCCGGAGGTCTGTGGT+GGG - Chr7:83756097-83756116 MsG0780040877.01.T01:CDS 55.0%
TATGACCTCTCTCCCCACAG+CGG + Chr7:83757636-83757655 None:intergenic 55.0%
TCACTAAACCCGGAGGTCTG+TGG - Chr7:83756093-83756112 MsG0780040877.01.T01:CDS 55.0%
TCTCCTAGGAGAACGAGACC+TGG + Chr7:83757872-83757891 None:intergenic 55.0%
TGAAGACCCGCTCCAGATCA+CGG + Chr7:83755298-83755317 None:intergenic 55.0%
TGAAGAGCAGAAGCCCCTCA+AGG - Chr7:83758232-83758251 MsG0780040877.01.T01:intron 55.0%
TGGGCTCGAGATTGCAAAGC+TGG - Chr7:83757589-83757608 MsG0780040877.01.T01:intron 55.0%
TTTCCGCAGCGTTCGAGATG+TGG - Chr7:83756323-83756342 MsG0780040877.01.T01:intron 55.0%
! CCACAAAAGAGCGCATCTCC+TGG - Chr7:83758153-83758172 MsG0780040877.01.T01:intron 55.0%
! CCAGGAGATGCGCTCTTTTG+TGG + Chr7:83758156-83758175 None:intergenic 55.0%
! GGGTGGCCTTGGTGTAATCT+TGG - Chr7:83756121-83756140 MsG0780040877.01.T01:CDS 55.0%
! TGAGGTAGGCCATGGTGTTG+GGG - Chr7:83757689-83757708 MsG0780040877.01.T01:intron 55.0%
!! ACTGTGGCATTGATGGCCAC+TGG - Chr7:83757569-83757588 MsG0780040877.01.T01:intron 55.0%
!! CTGTGGCATTGATGGCCACT+GGG - Chr7:83757570-83757589 MsG0780040877.01.T01:intron 55.0%
!! TGCTGCGCCCATTAGCCTTA+GGG + Chr7:83758272-83758291 None:intergenic 55.0%
!! TTCCTTGACTTGGAAGGCGG+AGG + Chr7:83758108-83758127 None:intergenic 55.0%
AAGCAGCGTCCAGATCCAGG+AGG + Chr7:83757547-83757566 None:intergenic 60.0%
AATGAGCTCAGGACTCGGCC+AGG - Chr7:83758408-83758427 MsG0780040877.01.T01:CDS 60.0%
CAGCCAGGTCTCGTTCTCCT+AGG - Chr7:83757866-83757885 MsG0780040877.01.T01:intron 60.0%
CCGGGCTGTAGCTTCTGTCA+CGG + Chr7:83757903-83757922 None:intergenic 60.0%
CCGTGACAGAAGCTACAGCC+CGG - Chr7:83757900-83757919 MsG0780040877.01.T01:intron 60.0%
CTAAACCCGGAGGTCTGTGG+TGG - Chr7:83756096-83756115 MsG0780040877.01.T01:CDS 60.0%
CTAGGAGAACGAGACCTGGC+TGG + Chr7:83757868-83757887 None:intergenic 60.0%
CTCGGGGTTCCCGTGATTCT+CGG - Chr7:83757491-83757510 MsG0780040877.01.T01:intron 60.0%
CTCGTTCCCGTGATCTGGAG+CGG - Chr7:83755288-83755307 MsG0780040877.01.T01:three_prime_UTR 60.0%
CTGACCTATAGCTGCGAGCC+GGG + Chr7:83757921-83757940 None:intergenic 60.0%
GAAGACCCGCTCCAGATCAC+GGG + Chr7:83755297-83755316 None:intergenic 60.0%
GGCTCCTATCCTCATCCCTG+GGG + Chr7:83758323-83758342 None:intergenic 60.0%
GGGCTCCTATCCTCATCCCT+GGG + Chr7:83758324-83758343 None:intergenic 60.0%
GTCCTCCGCCTTCCAAGTCA+AGG - Chr7:83758103-83758122 MsG0780040877.01.T01:intron 60.0%
TATCCTCATCCCTGGGGCTG+CGG + Chr7:83758317-83758336 None:intergenic 60.0%
TCACGGCTTCTGCCTCTCCT+AGG + Chr7:83757886-83757905 None:intergenic 60.0%
TCGGGGTTCCCGTGATTCTC+GGG - Chr7:83757492-83757511 MsG0780040877.01.T01:intron 60.0%
TGAGGATAGGAGCCCCGTAG+AGG - Chr7:83758329-83758348 MsG0780040877.01.T01:intron 60.0%
TGTTACCGCTGTGGGGAGAG+AGG - Chr7:83757628-83757647 MsG0780040877.01.T01:intron 60.0%
! TCGTTCCCGTGATCTGGAGC+GGG - Chr7:83755289-83755308 MsG0780040877.01.T01:three_prime_UTR 60.0%
!! CCTGGGGTGCCATTGTCTGT+GGG - Chr7:83755625-83755644 MsG0780040877.01.T01:CDS 60.0%
!! CTGCTGCGCCCATTAGCCTT+AGG + Chr7:83758273-83758292 None:intergenic 60.0%
ACCCTCCCACCACAGACCTC+CGG + Chr7:83756105-83756124 None:intergenic 65.0%
CAGCGTCCAGATCCAGGAGG+TGG + Chr7:83757544-83757563 None:intergenic 65.0%
CCCACAGACAATGGCACCCC+AGG + Chr7:83755628-83755647 None:intergenic 65.0%
CGAGAATCACGGGAACCCCG+AGG + Chr7:83757493-83757512 None:intergenic 65.0%
CGAGGTCCACCTCCTGGATC+TGG - Chr7:83757535-83757554 MsG0780040877.01.T01:intron 65.0%
GCAGCCCCAGGGATGAGGAT+AGG - Chr7:83758316-83758335 MsG0780040877.01.T01:intron 65.0%
GCAGGTCACGTTCTCCAGCC+AGG - Chr7:83757851-83757870 MsG0780040877.01.T01:intron 65.0%
GCGTGGGAACCGTATCCCAC+AGG - Chr7:83756026-83756045 MsG0780040877.01.T01:intron 65.0%
GCTGGAGAACGTGACCTGCC+TGG + Chr7:83757850-83757869 None:intergenic 65.0%
GGATAGGAGCCCCGTAGAGG+AGG - Chr7:83758332-83758351 MsG0780040877.01.T01:intron 65.0%
GGGGCTCCTATCCTCATCCC+TGG + Chr7:83758325-83758344 None:intergenic 65.0%
TTGGGTCGAGGTCCACCTCC+TGG - Chr7:83757529-83757548 MsG0780040877.01.T01:intron 65.0%
! ACAGCCCGGCTCGCAGCTAT+AGG - Chr7:83757914-83757933 MsG0780040877.01.T01:intron 65.0%
!! GCCTGGGGTGCCATTGTCTG+TGG - Chr7:83755624-83755643 MsG0780040877.01.T01:CDS 65.0%
CCCTCCCACCACAGACCTCC+GGG + Chr7:83756104-83756123 None:intergenic 70.0%
! ACCCGGAGGTCTGTGGTGGG+AGG - Chr7:83756100-83756119 MsG0780040877.01.T01:CDS 70.0%
! CCCGGAGGTCTGTGGTGGGA+GGG - Chr7:83756101-83756120 MsG0780040877.01.T01:CDS 70.0%
! CTGTGGTGGGAGGGTGGCCT+TGG - Chr7:83756110-83756129 MsG0780040877.01.T01:CDS 70.0%
! GGAGGTCTGTGGTGGGAGGG+TGG - Chr7:83756104-83756123 MsG0780040877.01.T01:CDS 70.0%
CAGCCGCAGCCCCAGGGATG+AGG - Chr7:83758311-83758330 MsG0780040877.01.T01:intron 75.0%
CATCCCTGGGGCTGCGGCTG+CGG + Chr7:83758311-83758330 None:intergenic 75.0%
TGCGGCTGCGGCTGCGGCTT+CGG + Chr7:83758299-83758318 None:intergenic 75.0%
! CAGCCGCAGCCGCAGCCCCA+GGG - Chr7:83758305-83758324 MsG0780040877.01.T01:intron 80.0%
! TGGGGCTGCGGCTGCGGCTG+CGG + Chr7:83758305-83758324 None:intergenic 80.0%
! GCAGCCGCAGCCGCAGCCCC+AGG - Chr7:83758304-83758323 MsG0780040877.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
Chr7 gene 83754768 83758954 83754768 ID=MsG0780040877.01;Name=MsG0780040877.01
Chr7 mRNA 83754768 83758954 83754768 ID=MsG0780040877.01.T01;Parent=MsG0780040877.01;Name=MsG0780040877.01.T01;_AED=0.43;_eAED=0.43;_QI=81|0.8|0.5|1|0.8|0.66|6|565|329
Chr7 exon 83754768 83755678 83754768 ID=MsG0780040877.01.T01:exon:19860;Parent=MsG0780040877.01.T01
Chr7 exon 83755787 83755871 83755787 ID=MsG0780040877.01.T01:exon:19859;Parent=MsG0780040877.01.T01
Chr7 exon 83756085 83756235 83756085 ID=MsG0780040877.01.T01:exon:19858;Parent=MsG0780040877.01.T01
Chr7 exon 83757090 83757390 83757090 ID=MsG0780040877.01.T01:exon:19857;Parent=MsG0780040877.01.T01
Chr7 exon 83758392 83758514 83758392 ID=MsG0780040877.01.T01:exon:19856;Parent=MsG0780040877.01.T01
Chr7 exon 83758890 83758954 83758890 ID=MsG0780040877.01.T01:exon:19855;Parent=MsG0780040877.01.T01
Chr7 five_prime_UTR 83758890 83758954 83758890 ID=MsG0780040877.01.T01:five_prime_utr;Parent=MsG0780040877.01.T01
Chr7 five_prime_UTR 83758499 83758514 83758499 ID=MsG0780040877.01.T01:five_prime_utr;Parent=MsG0780040877.01.T01
Chr7 CDS 83758392 83758498 83758392 ID=MsG0780040877.01.T01:cds;Parent=MsG0780040877.01.T01
Chr7 CDS 83757090 83757390 83757090 ID=MsG0780040877.01.T01:cds;Parent=MsG0780040877.01.T01
Chr7 CDS 83756085 83756235 83756085 ID=MsG0780040877.01.T01:cds;Parent=MsG0780040877.01.T01
Chr7 CDS 83755787 83755871 83755787 ID=MsG0780040877.01.T01:cds;Parent=MsG0780040877.01.T01
Chr7 CDS 83755333 83755678 83755333 ID=MsG0780040877.01.T01:cds;Parent=MsG0780040877.01.T01
Chr7 three_prime_UTR 83754768 83755332 83754768 ID=MsG0780040877.01.T01:three_prime_utr;Parent=MsG0780040877.01.T01
Gene Sequence

>MsG0780040877.01.T01

ATGCCTCGCTACGATGATAAGTATGGCAATACTCGCCTCTATGTGGGTCGTTTGTCTTCACGAACTCGTTCCCGTGATCTGGAGCGGGTCTTCAGCAGATATGGAAGCGTTCGAGATGTGGATATGAAGCATGATTACGCCTTTGTTGTAAGTTCTTACCCTTTCCCTGTTTTGTTACTTTTTTATTTTCACTTTGATTTATGTTCATTGCTCTGCCCAAAGGCGGCTTCTATTATCTACACGGGGGAGTTCAATTATGCGGTAAGATTTTTGTGTTACTTTCGTAGCTTGTTCCTTACATATTTTGAGCAGGAATTTAGAGATCCTCGAGATGCTGATGATGCAAGATACAATTTGGATGGTCGCGATATTGATGGAAGTCGTCTTATTGTGGAATTTGCAAAAGGGGTTCCTCGGGGTTCCCGTGATTCTCGGGATTCTAGGGAATATTTGGGTCGAGGTCCACCTCCTGGATCTGGACGCTGCTTTAACTGTGGCATTGATGGCCACTGGGCTCGAGATTGCAAAGCTGGGGATTGGAAGAACAAGTGTTACCGCTGCAGGTCACGTTCTCCAGCCAGGTCTCGTTCTCCTAGGAGAGGCAGAAGCCGTGACAGAAGCTACAGCCCGGCTCGCAGCTATAGCCGATCAAGATCTCCTGTCAGAAGAGATCGAAGCCCAGTTCCTTCAGATAGATCACGGAGTCCTCCGCCTTCCAAGTCAAGGAAGTATAGTCGATCTCCTGAAGGCAGTCCACAAAAGAGCGCATCTCCTGGGAATGATAGGGTGGTTGCAACCCAAGATGGGTCTGATTACAGTGATGGTGCTAGAGTGAAGAGCAGAAGCCCCTCAAGGGACAATGAAGATAGCCCTAAGGCTAATGGGCGCAGCAGAAGCCGAAGCCGCAGCCGCAGCCGCAGCCCCAGGGATGAGGATAGGAGCCCCGTAGAGGAGGATGATGACAACAATCGTCGCTCTCCATCACCTTAA
Protein sequence

>MsG0780040877.01.T01

MPRYDDKYGNTRLYVGRLSSRTRSRDLERVFSRYGSVRDVDMKHDYAFVVSSYPFPVLLLFYFHFDLCSLLCPKAASIIYTGEFNYAVRFLCYFRSLFLTYFEQEFRDPRDADDARYNLDGRDIDGSRLIVEFAKGVPRGSRDSRDSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCRSRSPARSRSPRRGRSRDRSYSPARSYSRSRSPVRRDRSPVPSDRSRSPPPSKSRKYSRSPEGSPQKSASPGNDRVVATQDGSDYSDGARVKSRSPSRDNEDSPKANGRSRSRSRSRSRSPRDEDRSPVEEDDDNNRRSPSP*