AlfalfaGEDB | MsG0180001837.01

M. sativa cultivar ZhongmuNo.1 / MsG0180001837.01

KEGG: K03259
GO: GO:0003723 GO:0003743 GO:0005737 GO:0006413
PFAM: PF01652

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180001837.01.T01	XP_003590157.1	95.673	208	6	1	1	208	1	205	1.08E-145	414

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180001837.01.T01	Q03389	64.734	207	59	3	16	208	3	209	4.29E-95	278

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180001837.01.T01	G7I6M4	95.673	208	6	1	1	208	1	205	5.18e-146	414

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048202.01	MsG0180001837.01	0.801275	9.721776e-49	4.623774e-46
MsG0080048933.01	MsG0180001837.01	0.853834	1.838941e-61	4.026419e-58
MsG0180000096.01	MsG0180001837.01	0.872489	3.058491e-67	1.282409e-63
MsG0180000118.01	MsG0180001837.01	0.843939	1.028872e-58	1.635465e-55
MsG0180000459.01	MsG0180001837.01	-0.812822	3.493916e-51	2.243885e-48
MsG0180001169.01	MsG0180001837.01	0.869703	2.538418e-66	9.616529e-63
MsG0180001829.01	MsG0180001837.01	0.845953	2.943288e-59	4.987594e-56
MsG0180001837.01	MsG0180003258.01	0.834103	3.636814e-56	4.272714e-53
MsG0180001837.01	MsG0180003897.01	0.854282	1.365445e-61	3.034127e-58
MsG0180001837.01	MsG0180004058.01	0.807386	5.184064e-50	2.883567e-47
MsG0180001837.01	MsG0180004064.01	0.909484	5.412443e-82	1.055304e-77
MsG0180001837.01	MsG0180004773.01	-0.828798	7.357125e-55	7.389184e-52
MsG0180001837.01	MsG0180005321.01	0.804919	1.714356e-49	8.950431e-47
MsG0180001837.01	MsG0180005613.01	-0.803149	4.000231e-49	1.995358e-46
MsG0180001837.01	MsG0180005984.01	0.803100	4.094733e-49	2.039828e-46
MsG0180001837.01	MsG0280006629.01	0.811850	5.696689e-51	3.564799e-48
MsG0180001837.01	MsG0280006747.01	0.850675	1.456635e-60	2.875405e-57
MsG0180001837.01	MsG0280006880.01	-0.820707	5.948159e-53	4.741600e-50
MsG0180001837.01	MsG0280007055.01	0.830877	2.292444e-55	2.446672e-52
MsG0180001837.01	MsG0280007084.01	0.868297	7.248361e-66	2.608594e-62
MsG0180001837.01	MsG0280007227.01	0.840761	7.157477e-58	1.029812e-54
MsG0180001837.01	MsG0280007505.01	0.803861	2.848114e-49	1.446925e-46
MsG0180001837.01	MsG0280007995.01	0.883712	3.557815e-71	2.281685e-67
MsG0180001837.01	MsG0280008263.01	0.873406	1.507637e-67	6.535978e-64
MsG0180001837.01	MsG0280010047.01	0.804514	2.082513e-49	1.075803e-46
MsG0180001837.01	MsG0380015446.01	0.855390	6.513321e-62	1.501529e-58
MsG0180001837.01	MsG0380015857.01	0.864082	1.570356e-64	4.869062e-61
MsG0180001837.01	MsG0380016031.01	0.802278	6.052756e-49	2.952906e-46
MsG0180001837.01	MsG0380016183.01	0.874312	7.449019e-68	3.337077e-64
MsG0180001837.01	MsG0380016718.01	-0.809336	1.990106e-50	1.165285e-47
MsG0180001837.01	MsG0380016744.01	0.820270	7.493456e-53	5.901698e-50
MsG0180001837.01	MsG0380016760.01	0.824172	9.320200e-54	8.193178e-51
MsG0180001837.01	MsG0380017385.01	-0.823243	1.538484e-53	1.317383e-50
MsG0180001837.01	MsG0380017610.01	0.804720	1.886561e-49	9.798713e-47
MsG0180001837.01	MsG0480019165.01	0.851194	1.040247e-60	2.089060e-57
MsG0180001837.01	MsG0480021279.01	0.838531	2.720585e-57	3.654270e-54
MsG0180001837.01	MsG0480021417.01	0.813260	2.800285e-51	1.819770e-48
MsG0180001837.01	MsG0480022006.01	0.827577	1.449153e-54	1.404544e-51
MsG0180001837.01	MsG0480022302.01	0.807670	4.513680e-50	2.529154e-47
MsG0180001837.01	MsG0480022789.01	0.877583	5.592450e-69	2.826419e-65
MsG0180001837.01	MsG0480022968.01	0.821413	4.092027e-53	3.326723e-50
MsG0180001837.01	MsG0480023242.01	-0.804644	1.956340e-49	1.014071e-46
MsG0180001837.01	MsG0480023380.01	0.824444	8.044055e-54	7.125934e-51
MsG0180001837.01	MsG0480023774.01	0.844994	5.355701e-59	8.799162e-56
MsG0180001837.01	MsG0480023925.01	0.837091	6.378970e-57	8.197776e-54
MsG0180001837.01	MsG0480023931.01	0.857235	1.874653e-62	4.595444e-59
MsG0180001837.01	MsG0480023970.01	0.827793	1.285522e-54	1.253818e-51
MsG0180001837.01	MsG0580024738.01	0.813423	2.579353e-51	1.683742e-48
MsG0180001837.01	MsG0580026029.01	0.822113	2.818024e-53	2.336821e-50
MsG0180001837.01	MsG0680035611.01	0.870561	1.330119e-66	5.197264e-63
MsG0180001837.01	MsG0780036859.01	0.806274	8.906836e-50	4.814414e-47
MsG0180001837.01	MsG0780037458.01	-0.807346	5.287074e-50	2.937767e-47
MsG0180001837.01	MsG0780037999.01	0.828648	7.997447e-55	7.997994e-52
MsG0180001837.01	MsG0780038383.01	0.840774	7.099013e-58	1.021824e-54
MsG0180001837.01	MsG0780038431.01	0.825286	5.093338e-54	4.622526e-51
MsG0180001837.01	MsG0780039937.01	0.825776	3.898829e-54	3.588238e-51
MsG0180001837.01	MsG0780040660.01	0.804768	1.843645e-49	9.587510e-47
MsG0180001837.01	MsG0780040877.01	0.807461	4.999310e-50	2.786214e-47
MsG0180001837.01	MsG0780041076.01	0.828430	9.027725e-55	8.971619e-52
MsG0180001837.01	MsG0780041240.01	0.811733	6.041092e-51	3.768725e-48
MsG0180001837.01	MsG0780041522.01	0.816166	6.361863e-52	4.474545e-49
MsG0180001837.01	MsG0880046486.01	0.875213	3.678483e-68	1.703787e-64
MsG0180001837.01	MsG0880047090.01	0.800331	1.515553e-48	7.037797e-46

PPI

Gene1	Gene2	Type
MsG0680031690.01	MsG0180001837.01	PPI
MsG0380018056.01	MsG0180001837.01	PPI
MsG0680031330.01	MsG0180001837.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180001837.01.T01	MTR_1g045130	95.673	208	6	1	1	208	1	205	1.31e-149	414
MsG0180001837.01.T01	MTR_2g018260	55.026	189	80	4	23	208	39	225	4.14e-68	208
MsG0180001837.01.T01	MTR_6g029230	34.507	142	92	1	34	175	48	188	3.78e-29	108

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180001837.01.T01	AT5G35620	58.621	203	71	5	13	208	2	198	6.28e-80	237
MsG0180001837.01.T01	AT5G35620	58.621	203	71	5	13	208	2	198	6.28e-80	237
MsG0180001837.01.T01	AT5G35620	60.606	165	56	4	13	170	2	164	1.03e-64	197
MsG0180001837.01.T01	AT4G18040	53.672	177	79	2	34	208	60	235	1.52e-63	197
MsG0180001837.01.T01	AT1G29590	51.977	177	82	2	34	208	65	240	5.70e-63	196
MsG0180001837.01.T01	AT1G29550	51.977	177	82	2	34	208	65	240	8.34e-63	195
MsG0180001837.01.T01	AT5G18110	35.915	142	90	1	34	175	43	183	7.99e-29	107

Find 83 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGCTGACTTTCACTTGTTTA+AGG	0.064986	1:+27993319	MsG0180001837.01.T01:CDS
CACTCGGGATCTTCCCATTT+TGG	0.167355	1:-27993353	None:intergenic
TAGAGAGAAGATGGACTTTC+TGG	0.182844	1:+27991723	MsG0180001837.01.T01:CDS
AGGATGGGATTGAACCAAAA+TGG	0.219575	1:+27993339	MsG0180001837.01.T01:CDS
TTGTTTCGTTATCCCTCTTT+TGG	0.231258	1:+27995172	MsG0180001837.01.T01:three_prime_UTR
ACCTAAACAAGGTGCTGCTT+GGG	0.298883	1:+27991763	MsG0180001837.01.T01:CDS
TCGATACCGTTGAAGAGTTT+TGG	0.298995	1:+27991813	MsG0180001837.01.T01:CDS
AAGATTGCCCTTTGATTTGC+TGG	0.317297	1:-27993402	None:intergenic
GGAAGTTGCGGCGGCTGTTC+CGG	0.319278	1:+27991661	MsG0180001837.01.T01:CDS
AGCGTTGCCAGGCAACTTGC+TGG	0.332275	1:-27993300	None:intergenic
GCTTTGATTGGTGAGCAATT+TGG	0.341945	1:+27993564	MsG0180001837.01.T01:CDS
TGCTTGTACAATCATAATAG+TGG	0.346556	1:+27995328	MsG0180001837.01.T01:three_prime_UTR
CCCCAAGCAGCACCTTGTTT+AGG	0.348201	1:-27991764	None:intergenic
AGCAGCACCTTGTTTAGGTT+TGG	0.348367	1:-27991759	None:intergenic
CCTGTCTCCGGTGCCGGTGT+AGG	0.354271	1:-27991686	None:intergenic
AAAATGACAATGTCAAGAAT+TGG	0.367144	1:-27995219	None:intergenic
CTTTCCTCCATTGGCACACT+CGG	0.373760	1:-27993369	None:intergenic
CACCTTGTTTAGGTTTGGAT+TGG	0.410534	1:-27991754	None:intergenic
CTGTCTCCGGTGCCGGTGTA+GGG	0.412272	1:-27991685	None:intergenic
CCTACACCGGCACCGGAGAC+AGG	0.419265	1:+27991686	MsG0180001837.01.T01:CDS
TTTAGCCCTGTCTCCGGTGC+CGG	0.427478	1:-27991692	None:intergenic
GTATCGAGCCTTTGCACCTC+GGG	0.428704	1:-27995040	None:intergenic
GACTTTCACTTGTTTAAGGA+TGG	0.431745	1:+27993323	MsG0180001837.01.T01:CDS
TATTAGAATTCACTTCCGTT+TGG	0.436031	1:+27995129	MsG0180001837.01.T01:three_prime_UTR
GCGTTGCCAGGCAACTTGCT+GGG	0.441331	1:-27993299	None:intergenic
AACCTAAACAAGGTGCTGCT+TGG	0.442662	1:+27991762	MsG0180001837.01.T01:CDS
GGATGGGATTGAACCAAAAT+GGG	0.454728	1:+27993340	MsG0180001837.01.T01:CDS
TCCGGTGCCGGTGTAGGGAC+CGG	0.467975	1:-27991680	None:intergenic
GAATAGTTGATGGCTTTGAT+TGG	0.470057	1:+27993552	MsG0180001837.01.T01:intron
AATTCACTTCCGTTTGGTTG+AGG	0.470568	1:+27995135	MsG0180001837.01.T01:three_prime_UTR
TTTATAATGCAGATGAGCAT+TGG	0.470732	1:+27994875	MsG0180001837.01.T01:intron
AACACAAACTAGAGAGAAGA+TGG	0.476038	1:+27991714	MsG0180001837.01.T01:CDS
GCGGTAGAGCCTTCAACGAT+TGG	0.484430	1:-27991632	None:intergenic
AAGTGAAAGTCAGCGTTGCC+AGG	0.484528	1:-27993311	None:intergenic
GAGAGTCCACTTTCCTCCAT+TGG	0.488880	1:-27993378	None:intergenic
GAAGTGAATTCTAATACAAA+TGG	0.491723	1:-27995122	None:intergenic
GGAGACACTGAGGACATTTG+CGG	0.492090	1:+27993585	MsG0180001837.01.T01:CDS
GACTCTCACCAGCAAATCAA+AGG	0.498552	1:+27993394	MsG0180001837.01.T01:CDS
CACCTGGTTCGACTCATTTG+CGG	0.498613	1:-27993664	None:intergenic
TTCAAGCCCAGCAAGTTGCC+TGG	0.503711	1:+27993293	MsG0180001837.01.T01:CDS
TGCTAAAACCCGAGGTGCAA+AGG	0.508101	1:+27995032	MsG0180001837.01.T01:CDS
ACTTTCACTTGTTTAAGGAT+GGG	0.509759	1:+27993324	MsG0180001837.01.T01:CDS
TGAAGGCTCTACCGCGGCAG+AGG	0.510636	1:+27991640	MsG0180001837.01.T01:CDS
TTGGGGAACCACTCTTCGTA+AGG	0.512191	1:+27991781	MsG0180001837.01.T01:CDS
GGTGTAATACTACTAAAACT+TGG	0.516691	1:+27995194	MsG0180001837.01.T01:three_prime_UTR
GGCTGTTCCGGTCCCTACAC+CGG	0.522985	1:+27991673	MsG0180001837.01.T01:CDS
GCTTGTACAATCATAATAGT+GGG	0.524354	1:+27995329	MsG0180001837.01.T01:three_prime_UTR
AGTAGTATTACACCCAAAAG+AGG	0.524374	1:-27995185	None:intergenic
TGTATCGAGCCTTTGCACCT+CGG	0.539970	1:-27995041	None:intergenic
TCCGGTCCCTACACCGGCAC+CGG	0.541798	1:+27991679	MsG0180001837.01.T01:CDS
CGCCGCAACTTCCTCTGCCG+CGG	0.556550	1:-27991651	None:intergenic
ACAACAGAACCAATCGTTGA+AGG	0.556771	1:+27991623	MsG0180001837.01.T01:CDS
TTTCCTCCATTGGCACACTC+GGG	0.558375	1:-27993368	None:intergenic
AGCCGCAAATGAGTCGAACC+AGG	0.565430	1:+27993662	MsG0180001837.01.T01:CDS
AGATGAGCATTGGAAGGAAG+TGG	0.568986	1:+27994885	MsG0180001837.01.T01:intron
AAATTAACACCTCAACCAAA+CGG	0.569123	1:-27995144	None:intergenic
CGCGGCAGAGGAAGTTGCGG+CGG	0.573339	1:+27991652	MsG0180001837.01.T01:CDS
CTACACCGGCACCGGAGACA+GGG	0.575935	1:+27991687	MsG0180001837.01.T01:CDS
GAAGATCCCGAGTGTGCCAA+TGG	0.580686	1:+27993362	MsG0180001837.01.T01:CDS
TAATGCAGATGAGCATTGGA+AGG	0.587446	1:+27994879	MsG0180001837.01.T01:intron
GGAGTAAACCTTACGAAGAG+TGG	0.590798	1:-27991789	None:intergenic
CTTCTCGACACAAAGAAACA+TGG	0.594166	1:+27991598	MsG0180001837.01.T01:exon
AAACTCTTCAACGGTATCGA+AGG	0.596284	1:-27991810	None:intergenic
CTCATGTCATAAACTCACAA+GGG	0.599435	1:-27995358	None:intergenic
TAGTTGTGAGTGTGCGCCAG+TGG	0.600492	1:+27993610	MsG0180001837.01.T01:CDS
AGCATTGCCAGCACAAAGCG+CGG	0.606993	1:-27995091	None:intergenic
GTAGTATTACACCCAAAAGA+GGG	0.608680	1:-27995184	None:intergenic
ACTCTCACCAGCAAATCAAA+GGG	0.610543	1:+27993395	MsG0180001837.01.T01:CDS
TACCGCGGCAGAGGAAGTTG+CGG	0.615732	1:+27991649	MsG0180001837.01.T01:CDS
CCTAAACAAGGTGCTGCTTG+GGG	0.622835	1:+27991764	MsG0180001837.01.T01:CDS
GCTCATGTCATAAACTCACA+AGG	0.632785	1:-27995359	None:intergenic
AGTGTGCCAATGGAGGAAAG+TGG	0.640587	1:+27993372	MsG0180001837.01.T01:CDS
GATCCCGAGTGTGCCAATGG+AGG	0.645027	1:+27993365	MsG0180001837.01.T01:CDS
GTACCACCAAAACTCTTCAA+CGG	0.656585	1:-27991819	None:intergenic
GGCAAGACAAAATTTCGTTG+TGG	0.664072	1:+27993631	MsG0180001837.01.T01:CDS
AATTACAGTTTCGAGCCACA+TGG	0.668557	1:-27993429	None:intergenic
ATCAAATTCATAGAAAACTG+TGG	0.669778	1:-27995293	None:intergenic
CAGGAAGATGCTAAAACCCG+AGG	0.674698	1:+27995024	MsG0180001837.01.T01:intron
AACCAATCCAAACCTAAACA+AGG	0.681137	1:+27991752	MsG0180001837.01.T01:CDS
TCATGTCATAAACTCACAAG+GGG	0.689882	1:-27995357	None:intergenic
AGGGCAATCTTGATACCATG+TGG	0.704318	1:+27993414	MsG0180001837.01.T01:CDS
AATCGTTGAAGGCTCTACCG+CGG	0.717531	1:+27991634	MsG0180001837.01.T01:CDS
TGAGCAATTTGGAGACACTG+AGG	0.752740	1:+27993575	MsG0180001837.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTCAATAGAAAATAAAAAAA+CGG	-	Chr1:27991863-27991882	None:intergenic	10.0%
!!!	TATTGAATATTTATTTTGAA+TGG	+	Chr1:27992104-27992123	MsG0180001837.01.T01:intron	10.0%
!!!	TTTATTTTCTATTGAATTTA+AGG	+	Chr1:27991867-27991886	MsG0180001837.01.T01:intron	10.0%
!!!	TTTTCTTTTAAAGAATATAT+GGG	+	Chr1:27993482-27993501	MsG0180001837.01.T01:intron	10.0%
!!!	TTTTTCTTTTAAAGAATATA+TGG	+	Chr1:27993481-27993500	MsG0180001837.01.T01:intron	10.0%
!!	AAAAGAAAAAAGAAAAAAAC+AGG	-	Chr1:27993471-27993490	None:intergenic	15.0%
!!	TAAAAAAGAACTCAAAAAAA+GGG	-	Chr1:27994388-27994407	None:intergenic	15.0%
!!	TGATATATGATAAAACATTA+CGG	+	Chr1:27992484-27992503	MsG0180001837.01.T01:intron	15.0%
!!	TTATTATTATTTGAATGTTC+AGG	+	Chr1:27993111-27993130	MsG0180001837.01.T01:intron	15.0%
!!!	ATATTTATTTTGAATGGTTT+TGG	+	Chr1:27992110-27992129	MsG0180001837.01.T01:intron	15.0%
!!!	GTAATTTATGTTATTTTGTT+TGG	+	Chr1:27993731-27993750	MsG0180001837.01.T01:intron	15.0%
!!!	TTATTCAATAAGCTATTTTA+GGG	+	Chr1:27993923-27993942	MsG0180001837.01.T01:intron	15.0%
!!!	TTTATTCAATAAGCTATTTT+AGG	+	Chr1:27993922-27993941	MsG0180001837.01.T01:intron	15.0%
!!!	TTTCTTTTAAAGAATATATG+GGG	+	Chr1:27993483-27993502	MsG0180001837.01.T01:intron	15.0%
!!!	TTTTTGATGATTTTATTTGT+GGG	+	Chr1:27992033-27992052	MsG0180001837.01.T01:intron	15.0%
!!!	TTTTTTGATGATTTTATTTG+TGG	+	Chr1:27992032-27992051	MsG0180001837.01.T01:intron	15.0%
!!	AAAAAAGAACTCAAAAAAAG+GGG	-	Chr1:27994387-27994406	None:intergenic	20.0%
!!	CTAAAAAAGAACTCAAAAAA+AGG	-	Chr1:27994389-27994408	None:intergenic	20.0%
!!	TAATTAGAATCTAAGAGATA+TGG	+	Chr1:27992158-27992177	MsG0180001837.01.T01:intron	20.0%
!!	TTACTATTATTTGAATGTTC+AGG	+	Chr1:27993200-27993219	MsG0180001837.01.T01:intron	20.0%
!!!	AAAATTCAAATCTTTTAGGT+GGG	-	Chr1:27992534-27992553	None:intergenic	20.0%
!!!	ATTTATGTTGATTTGAATGT+TGG	+	Chr1:27994643-27994662	MsG0180001837.01.T01:intron	20.0%
!!!	CAAGAAAATTCAAATCTTTT+AGG	-	Chr1:27992538-27992557	None:intergenic	20.0%
!!!	TATTTTAGGGAGATTAATTA+AGG	+	Chr1:27993936-27993955	MsG0180001837.01.T01:intron	20.0%
!!!	TTTTGATGATTTTATTTGTG+GGG	+	Chr1:27992034-27992053	MsG0180001837.01.T01:intron	20.0%
!	AAAAAGAACTCAAAAAAAGG+GGG	-	Chr1:27994386-27994405	None:intergenic	25.0%
!	AAAATGACAATGTCAAGAAT+TGG	-	Chr1:27995222-27995241	None:intergenic	25.0%
!	AGAAGATTATAACCCTTTAA+AGG	-	Chr1:27992996-27993015	None:intergenic	25.0%
!	ATCAAATTCATAGAAAACTG+TGG	-	Chr1:27995296-27995315	None:intergenic	25.0%
!	GAAGTGAATTCTAATACAAA+TGG	-	Chr1:27995125-27995144	None:intergenic	25.0%
!	TATATGATAAAACATTACGG+CGG	+	Chr1:27992487-27992506	MsG0180001837.01.T01:intron	25.0%
!	TGTAAGTTGTAACTAGATAA+TGG	+	Chr1:27993778-27993797	MsG0180001837.01.T01:intron	25.0%
!!	GAAAATTCAAATCTTTTAGG+TGG	-	Chr1:27992535-27992554	None:intergenic	25.0%
!!	TGATTTTTGTAGATCTTAGA+GGG	+	Chr1:27991942-27991961	MsG0180001837.01.T01:intron	25.0%
!!	TTGATTTTTGTAGATCTTAG+AGG	+	Chr1:27991941-27991960	MsG0180001837.01.T01:intron	25.0%
!!!	AAATTCAAATCTTTTAGGTG+GGG	-	Chr1:27992533-27992552	None:intergenic	25.0%
!!!	ATGTTTGTTGTCACTAATTA+TGG	+	Chr1:27993519-27993538	MsG0180001837.01.T01:intron	25.0%
!!!	TATATTTTTGTTGACTTCCT+TGG	+	Chr1:27994314-27994333	MsG0180001837.01.T01:intron	25.0%
!!!	TCTATTTTTTAGCTCATGTA+TGG	+	Chr1:27994718-27994737	MsG0180001837.01.T01:intron	25.0%
!!!	TGGTTTTATTGAATAGTTGA+TGG	+	Chr1:27993542-27993561	MsG0180001837.01.T01:intron	25.0%
!!!	TTATTTGAATGTTCAGGTTT+TGG	+	Chr1:27993117-27993136	MsG0180001837.01.T01:intron	25.0%
!!!	TTTGATGATTTTATTTGTGG+GGG	+	Chr1:27992035-27992054	MsG0180001837.01.T01:intron	25.0%
!!!	TTTTAGTTCCAGAATTATGA+TGG	+	Chr1:27994145-27994164	MsG0180001837.01.T01:intron	25.0%
	AAATTAACACCTCAACCAAA+CGG	-	Chr1:27995147-27995166	None:intergenic	30.0%
	AAGAATGGTCAAATAACTAG+AGG	+	Chr1:27992404-27992423	MsG0180001837.01.T01:intron	30.0%
	AATATTAGAGAGAGAGAGTT+GGG	+	Chr1:27992288-27992307	MsG0180001837.01.T01:intron	30.0%
	ACTTTCACTTGTTTAAGGAT+GGG	+	Chr1:27993324-27993343	MsG0180001837.01.T01:CDS	30.0%
	AGAATGGTCAAATAACTAGA+GGG	+	Chr1:27992405-27992424	MsG0180001837.01.T01:intron	30.0%
	AGTACCTATCATAGAAAAGA+TGG	+	Chr1:27992313-27992332	MsG0180001837.01.T01:intron	30.0%
	ATGTAATGTTGAAATGACCA+AGG	-	Chr1:27994334-27994353	None:intergenic	30.0%
	ATTTCAGTAACTCTTGAATG+TGG	+	Chr1:27994106-27994125	MsG0180001837.01.T01:intron	30.0%
	CCATAATGTTGTGTCATATA+CGG	-	Chr1:27992654-27992673	None:intergenic	30.0%
	CTTACATGTTCAATTGTTAC+AGG	+	Chr1:27995005-27995024	MsG0180001837.01.T01:intron	30.0%
	GAATATTGCCATCATAATTC+TGG	-	Chr1:27994156-27994175	None:intergenic	30.0%
	GATTTGAATGTTGGTACTAA+TGG	+	Chr1:27994652-27994671	MsG0180001837.01.T01:intron	30.0%
	GCTTGTACAATCATAATAGT+GGG	+	Chr1:27995329-27995348	MsG0180001837.01.T01:three_prime_UTR	30.0%
	GGTGTAATACTACTAAAACT+TGG	+	Chr1:27995194-27995213	MsG0180001837.01.T01:three_prime_UTR	30.0%
	GTCATTTCAACATTACATTC+TGG	+	Chr1:27994336-27994355	MsG0180001837.01.T01:intron	30.0%
	TAGTCAAATGTGCCTTTAAA+GGG	+	Chr1:27992981-27993000	MsG0180001837.01.T01:intron	30.0%
	TATTAGAATTCACTTCCGTT+TGG	+	Chr1:27995129-27995148	MsG0180001837.01.T01:three_prime_UTR	30.0%
	TCACATATATACTGAACACT+GGG	+	Chr1:27993033-27993052	MsG0180001837.01.T01:intron	30.0%
	TGCTTGTACAATCATAATAG+TGG	+	Chr1:27995328-27995347	MsG0180001837.01.T01:three_prime_UTR	30.0%
	TGTTGGTATTGTTAGACTTA+AGG	+	Chr1:27993870-27993889	MsG0180001837.01.T01:intron	30.0%
	TTCACATATATACTGAACAC+TGG	+	Chr1:27993032-27993051	MsG0180001837.01.T01:intron	30.0%
	TTGCTGTCATTCAGAATTTA+AGG	-	Chr1:27994489-27994508	None:intergenic	30.0%
	TTTATAATGCAGATGAGCAT+TGG	+	Chr1:27994875-27994894	MsG0180001837.01.T01:intron	30.0%
	TTTCAGTAACTCTTGAATGT+GGG	+	Chr1:27994107-27994126	MsG0180001837.01.T01:intron	30.0%
!	AAATGCCATCTATGAGTTTT+GGG	-	Chr1:27994832-27994851	None:intergenic	30.0%
!	AGTTACTGAAATGCTTTAAG+AGG	-	Chr1:27994098-27994117	None:intergenic	30.0%
!	GTTTCTCTTATAGTTTTCCT+AGG	-	Chr1:27992440-27992459	None:intergenic	30.0%
!	TTTGTTGTCACTAATTATGG+TGG	+	Chr1:27993522-27993541	MsG0180001837.01.T01:intron	30.0%
!!	AAATTAAGTTTTAGCCTCCA+AGG	-	Chr1:27994627-27994646	None:intergenic	30.0%
!!	GTTACTGAAATGCTTTAAGA+GGG	-	Chr1:27994097-27994116	None:intergenic	30.0%
!!!	TGAATGGTTTTGGTTATGTT+TGG	+	Chr1:27992120-27992139	MsG0180001837.01.T01:intron	30.0%
!!!	TTGGTGGTACGTTTTTTTTA+GGG	+	Chr1:27991832-27991851	MsG0180001837.01.T01:intron	30.0%
!!!	TTTGGTGGTACGTTTTTTTT+AGG	+	Chr1:27991831-27991850	MsG0180001837.01.T01:intron	30.0%
	AAAGAATATATGGGGTGATC+TGG	+	Chr1:27993491-27993510	MsG0180001837.01.T01:intron	35.0%
	AACACAAACTAGAGAGAAGA+TGG	+	Chr1:27991714-27991733	MsG0180001837.01.T01:CDS	35.0%
	AACCAATCCAAACCTAAACA+AGG	+	Chr1:27991752-27991771	MsG0180001837.01.T01:CDS	35.0%
	ACCTATCATAGAAAAGATGG+TGG	+	Chr1:27992316-27992335	MsG0180001837.01.T01:intron	35.0%
	AGAGTAGATCAGATGAAGAA+TGG	+	Chr1:27992389-27992408	MsG0180001837.01.T01:intron	35.0%
	AGCTAGAAAGTTTGCAGAAA+AGG	-	Chr1:27994594-27994613	None:intergenic	35.0%
	AGTAGTATTACACCCAAAAG+AGG	-	Chr1:27995188-27995207	None:intergenic	35.0%
	ATATTAGAGAGAGAGAGTTG+GGG	+	Chr1:27992289-27992308	MsG0180001837.01.T01:intron	35.0%
	ATCTTAGAGGGAGATACTTA+GGG	+	Chr1:27991954-27991973	MsG0180001837.01.T01:intron	35.0%
	CAATATTAGAGAGAGAGAGT+TGG	+	Chr1:27992287-27992306	MsG0180001837.01.T01:intron	35.0%
	CACATTTAGATTCCACAGTA+AGG	+	Chr1:27992366-27992385	MsG0180001837.01.T01:intron	35.0%
	CCGTATATGACACAACATTA+TGG	+	Chr1:27992651-27992670	MsG0180001837.01.T01:intron	35.0%
	CTAGTAAGCTTGTAAAAGAG+AGG	+	Chr1:27992211-27992230	MsG0180001837.01.T01:intron	35.0%
	CTCATGTCATAAACTCACAA+GGG	-	Chr1:27995361-27995380	None:intergenic	35.0%
	GAAAAGCCCAAAAAAATCGA+AGG	-	Chr1:27994464-27994483	None:intergenic	35.0%
	GACTTTCACTTGTTTAAGGA+TGG	+	Chr1:27993323-27993342	MsG0180001837.01.T01:CDS	35.0%
	GTAGTATTACACCCAAAAGA+GGG	-	Chr1:27995187-27995206	None:intergenic	35.0%
	GTAGTCAAATGTGCCTTTAA+AGG	+	Chr1:27992980-27992999	MsG0180001837.01.T01:intron	35.0%
	TCATGTCATAAACTCACAAG+GGG	-	Chr1:27995360-27995379	None:intergenic	35.0%
	TTCCTTAAACGTTGATGTTG+CGG	+	Chr1:27994760-27994779	MsG0180001837.01.T01:intron	35.0%
	TTCTGCTCCTAAACTTTAAG+TGG	+	Chr1:27994959-27994978	MsG0180001837.01.T01:intron	35.0%
!	AATGCCATCTATGAGTTTTG+GGG	-	Chr1:27994831-27994850	None:intergenic	35.0%
!	CAAATGCCATCTATGAGTTT+TGG	-	Chr1:27994833-27994852	None:intergenic	35.0%
!	GCTTTCTAGCAGAAATAAGA+CGG	-	Chr1:27993818-27993837	None:intergenic	35.0%
!	TCCACCATCTTTTCTATGAT+AGG	-	Chr1:27992320-27992339	None:intergenic	35.0%
!	TGTTTCGTTATCCCTCTTTT+GGG	+	Chr1:27995173-27995192	MsG0180001837.01.T01:three_prime_UTR	35.0%
!	TTGTTTCGTTATCCCTCTTT+TGG	+	Chr1:27995172-27995191	MsG0180001837.01.T01:three_prime_UTR	35.0%
!!	ATAGAAAAGATGGTGGAAAC+TGG	+	Chr1:27992323-27992342	MsG0180001837.01.T01:intron	35.0%
!!	CAGGTTTTGGTAAATAACGA+TGG	+	Chr1:27993130-27993149	MsG0180001837.01.T01:intron	35.0%
!!	GAATAGTTGATGGCTTTGAT+TGG	+	Chr1:27993552-27993571	MsG0180001837.01.T01:intron	35.0%
!!	TTGACACGAGCTTTTTGTTT+TGG	+	Chr1:27994850-27994869	MsG0180001837.01.T01:intron	35.0%
!!!	CATGCTTTTAGAACGTTACA+AGG	-	Chr1:27995255-27995274	None:intergenic	35.0%
	AAACTGGACTTAGGTGGTTT+GGG	+	Chr1:27992339-27992358	MsG0180001837.01.T01:intron	40.0%
	AAGAGAGGAGAATATTGCGT+TGG	+	Chr1:27992226-27992245	MsG0180001837.01.T01:intron	40.0%
	AATTACAGTTTCGAGCCACA+TGG	-	Chr1:27993432-27993451	None:intergenic	40.0%
	AATTCACTTCCGTTTGGTTG+AGG	+	Chr1:27995135-27995154	MsG0180001837.01.T01:three_prime_UTR	40.0%
	ACAACAGAACCAATCGTTGA+AGG	+	Chr1:27991623-27991642	MsG0180001837.01.T01:CDS	40.0%
	ACACTTCCTTCACATTGTGA+AGG	-	Chr1:27993840-27993859	None:intergenic	40.0%
	ACTCTCACCAGCAAATCAAA+GGG	+	Chr1:27993395-27993414	MsG0180001837.01.T01:CDS	40.0%
	AGAAAGCCTTCACAATGTGA+AGG	+	Chr1:27993831-27993850	MsG0180001837.01.T01:intron	40.0%
	AGAATATTGCGTTGGATGTG+TGG	+	Chr1:27992234-27992253	MsG0180001837.01.T01:intron	40.0%
	AGGATGGGATTGAACCAAAA+TGG	+	Chr1:27993339-27993358	MsG0180001837.01.T01:CDS	40.0%
	ATAACTACAGGGATGACTTC+AGG	-	Chr1:27994199-27994218	None:intergenic	40.0%
	ATTCTGAATGACAGCAAAGC+AGG	+	Chr1:27994492-27994511	MsG0180001837.01.T01:intron	40.0%
	CAATATAGTCCACCGAGTAA+AGG	-	Chr1:27994794-27994813	None:intergenic	40.0%
	CTTCTCGACACAAAGAAACA+TGG	+	Chr1:27991598-27991617	MsG0180001837.01.T01:exon	40.0%
	GATCTTAGAGGGAGATACTT+AGG	+	Chr1:27991953-27991972	MsG0180001837.01.T01:intron	40.0%
	GCAGAAGCCACTTAAAGTTT+AGG	-	Chr1:27994969-27994988	None:intergenic	40.0%
	GCCCAAAAAAATCGAAGGAA+CGG	-	Chr1:27994459-27994478	None:intergenic	40.0%
	GCTCATGTCATAAACTCACA+AGG	-	Chr1:27995362-27995381	None:intergenic	40.0%
	GCTTTGATTGGTGAGCAATT+TGG	+	Chr1:27993564-27993583	MsG0180001837.01.T01:CDS	40.0%
	GGATGGGATTGAACCAAAAT+GGG	+	Chr1:27993340-27993359	MsG0180001837.01.T01:CDS	40.0%
	GGCAAGACAAAATTTCGTTG+TGG	+	Chr1:27993631-27993650	MsG0180001837.01.T01:CDS	40.0%
	GTACCACCAAAACTCTTCAA+CGG	-	Chr1:27991822-27991841	None:intergenic	40.0%
	GTCATCCCTGTAGTTATTAG+TGG	+	Chr1:27994202-27994221	MsG0180001837.01.T01:intron	40.0%
	GTTAGACTTAAGGTGCATCT+GGG	+	Chr1:27993880-27993899	MsG0180001837.01.T01:intron	40.0%
	TACCGCAACATCAACGTTTA+AGG	-	Chr1:27994765-27994784	None:intergenic	40.0%
	TGTTAGACTTAAGGTGCATC+TGG	+	Chr1:27993879-27993898	MsG0180001837.01.T01:intron	40.0%
	TGTTTCTTTGTGTCGAGAAG+AGG	-	Chr1:27991598-27991617	None:intergenic	40.0%
	TTTAGGTGGGGTCAAATACA+TGG	-	Chr1:27992521-27992540	None:intergenic	40.0%
!	AAACTCTTCAACGGTATCGA+AGG	-	Chr1:27991813-27991832	None:intergenic	40.0%
!	AAGGAACGGCTATAAGTTGA+GGG	-	Chr1:27994445-27994464	None:intergenic	40.0%
!	ACGAAATTTTGTCTTGCCAC+TGG	-	Chr1:27993629-27993648	None:intergenic	40.0%
!	ATGAAGTTTTGCATAGTGGC+TGG	-	Chr1:27994228-27994247	None:intergenic	40.0%
!	CACCTTGTTTAGGTTTGGAT+TGG	-	Chr1:27991757-27991776	None:intergenic	40.0%
!	GAAGTGTTTGTGGTGAATGT+TGG	+	Chr1:27993853-27993872	MsG0180001837.01.T01:intron	40.0%
!	TAGAGAGAAGATGGACTTTC+TGG	+	Chr1:27991723-27991742	MsG0180001837.01.T01:CDS	40.0%
!	TCGATACCGTTGAAGAGTTT+TGG	+	Chr1:27991813-27991832	MsG0180001837.01.T01:CDS	40.0%
!	TGCGATGAAGTTTTGCATAG+TGG	-	Chr1:27994232-27994251	None:intergenic	40.0%
!!	AAGATTGCCCTTTGATTTGC+TGG	-	Chr1:27993405-27993424	None:intergenic	40.0%
!!	ATACCGTTGAAGAGTTTTGG+TGG	+	Chr1:27991816-27991835	MsG0180001837.01.T01:CDS	40.0%
!!	CAATGTGAAGGAAGTGTTTG+TGG	+	Chr1:27993843-27993862	MsG0180001837.01.T01:intron	40.0%
!!	CGCTGACTTTCACTTGTTTA+AGG	+	Chr1:27993319-27993338	MsG0180001837.01.T01:CDS	40.0%
!!	GCTTGGTTTTTGTCGTTGTT+TGG	+	Chr1:27992719-27992738	MsG0180001837.01.T01:intron	40.0%
!!	TAAGTTTTAGCCTCCAAGGT+GGG	-	Chr1:27994623-27994642	None:intergenic	40.0%
!!	TAATGCAGATGAGCATTGGA+AGG	+	Chr1:27994879-27994898	MsG0180001837.01.T01:intron	40.0%
!!	TTAAGTTTTAGCCTCCAAGG+TGG	-	Chr1:27994624-27994643	None:intergenic	40.0%
!!!	AGCCGTTCCTTCGATTTTTT+TGG	+	Chr1:27994454-27994473	MsG0180001837.01.T01:intron	40.0%
!!!	GCCGTTCCTTCGATTTTTTT+GGG	+	Chr1:27994455-27994474	MsG0180001837.01.T01:intron	40.0%
	AGAGGAAATGACAGAACAGG+AGG	-	Chr1:27994520-27994539	None:intergenic	45.0%
	AGGAGAGGAAATGACAGAAC+AGG	-	Chr1:27994523-27994542	None:intergenic	45.0%
	AGGGCAATCTTGATACCATG+TGG	+	Chr1:27993414-27993433	MsG0180001837.01.T01:CDS	45.0%
	ATCACTGTAGCAGCTGCAAT+TGG	-	Chr1:27994280-27994299	None:intergenic	45.0%
	CTGATCTACTCTCCTTACTG+TGG	-	Chr1:27992381-27992400	None:intergenic	45.0%
	GAAACTGGACTTAGGTGGTT+TGG	+	Chr1:27992338-27992357	MsG0180001837.01.T01:intron	45.0%
	GAAGGAACGGCTATAAGTTG+AGG	-	Chr1:27994446-27994465	None:intergenic	45.0%
	GACTCTCACCAGCAAATCAA+AGG	+	Chr1:27993394-27993413	MsG0180001837.01.T01:CDS	45.0%
	GATCACATTAACAACGCACC+TGG	-	Chr1:27993683-27993702	None:intergenic	45.0%
	GCTGGCCACTAATAACTACA+GGG	-	Chr1:27994210-27994229	None:intergenic	45.0%
	GGAGTAAACCTTACGAAGAG+TGG	-	Chr1:27991792-27991811	None:intergenic	45.0%
	GGTCAAATAACTAGAGGGAG+AGG	+	Chr1:27992410-27992429	MsG0180001837.01.T01:intron	45.0%
	TCATTTCCTCTCCTCCGAAA+GGG	+	Chr1:27994529-27994548	MsG0180001837.01.T01:intron	45.0%
	TGAGCAATTTGGAGACACTG+AGG	+	Chr1:27993575-27993594	MsG0180001837.01.T01:CDS	45.0%
	TGCAAAACTTCATCGCATCG+TGG	+	Chr1:27994235-27994254	MsG0180001837.01.T01:intron	45.0%
!	AGCAGCACCTTGTTTAGGTT+TGG	-	Chr1:27991762-27991781	None:intergenic	45.0%
!!	AACCTAAACAAGGTGCTGCT+TGG	+	Chr1:27991762-27991781	MsG0180001837.01.T01:CDS	45.0%
!!	AAGTTTTAGCCTCCAAGGTG+GGG	-	Chr1:27994622-27994641	None:intergenic	45.0%
!!	ACATTCTGGTTTATGTCCCC+AGG	+	Chr1:27994350-27994369	MsG0180001837.01.T01:intron	45.0%
!!	ACCTAAACAAGGTGCTGCTT+GGG	+	Chr1:27991763-27991782	MsG0180001837.01.T01:CDS	45.0%
!!	AGAGGGTGTTTCAAAGAGCT+TGG	-	Chr1:27994080-27994099	None:intergenic	45.0%
!!	AGATGAGCATTGGAAGGAAG+TGG	+	Chr1:27994885-27994904	MsG0180001837.01.T01:intron	45.0%
!!	AGATGGTGGAAACTGGACTT+AGG	+	Chr1:27992330-27992349	MsG0180001837.01.T01:intron	45.0%
!!	GAGGGTGTTTCAAAGAGCTT+GGG	-	Chr1:27994079-27994098	None:intergenic	45.0%
!!!	TTGTGTTTTAGCCCTGTCTC+CGG	-	Chr1:27991701-27991720	None:intergenic	45.0%
	AAAGCCGCACAAGATGAGGA+GGG	-	Chr1:27994564-27994583	None:intergenic	50.0%
	AAAGGGGGAAAACAGAAGCC+TGG	-	Chr1:27994371-27994390	None:intergenic	50.0%
	AAGGGGGAAAACAGAAGCCT+GGG	-	Chr1:27994370-27994389	None:intergenic	50.0%
	AAGTGAAAGTCAGCGTTGCC+AGG	-	Chr1:27993314-27993333	None:intergenic	50.0%
	AATCGTTGAAGGCTCTACCG+CGG	+	Chr1:27991634-27991653	MsG0180001837.01.T01:CDS	50.0%
	AGTGTGCCAATGGAGGAAAG+TGG	+	Chr1:27993372-27993391	MsG0180001837.01.T01:CDS	50.0%
	CAGGAAGATGCTAAAACCCG+AGG	+	Chr1:27995024-27995043	MsG0180001837.01.T01:intron	50.0%
	CATCTTGTGCGGCTTTCTGA+TGG	+	Chr1:27994568-27994587	MsG0180001837.01.T01:intron	50.0%
	CTACAGGGATGACTTCAGGT+AGG	-	Chr1:27994195-27994214	None:intergenic	50.0%
	CTTTCCTCCATTGGCACACT+CGG	-	Chr1:27993372-27993391	None:intergenic	50.0%
	GAGAGTCCACTTTCCTCCAT+TGG	-	Chr1:27993381-27993400	None:intergenic	50.0%
	GAGGGAAGATGAAGCCCTTT+CGG	-	Chr1:27994546-27994565	None:intergenic	50.0%
	GCCACCCCAAAACTCATAGA+TGG	+	Chr1:27994824-27994843	MsG0180001837.01.T01:intron	50.0%
	GGAGACACTGAGGACATTTG+CGG	+	Chr1:27993585-27993604	MsG0180001837.01.T01:CDS	50.0%
	GTAGCAGCTGCAATTGGTAG+CGG	-	Chr1:27994274-27994293	None:intergenic	50.0%
	GTCATTTCCTCTCCTCCGAA+AGG	+	Chr1:27994528-27994547	MsG0180001837.01.T01:intron	50.0%
	TAGTCCACCGAGTAAAGGTG+TGG	-	Chr1:27994789-27994808	None:intergenic	50.0%
	TCAGAAAGCCGCACAAGATG+AGG	-	Chr1:27994568-27994587	None:intergenic	50.0%
	TCTTCCCTCCTCATCTTGTG+CGG	+	Chr1:27994557-27994576	MsG0180001837.01.T01:intron	50.0%
	TGCTAAAACCCGAGGTGCAA+AGG	+	Chr1:27995032-27995051	MsG0180001837.01.T01:CDS	50.0%
	TGGTGGAAACTGGACTTAGG+TGG	+	Chr1:27992333-27992352	MsG0180001837.01.T01:intron	50.0%
	TGTATCGAGCCTTTGCACCT+CGG	-	Chr1:27995044-27995063	None:intergenic	50.0%
	TTGGGGAACCACTCTTCGTA+AGG	+	Chr1:27991781-27991800	MsG0180001837.01.T01:CDS	50.0%
	TTTCCTCCATTGGCACACTC+GGG	-	Chr1:27993371-27993390	None:intergenic	50.0%
!	CACCTGGTTCGACTCATTTG+CGG	-	Chr1:27993667-27993686	None:intergenic	50.0%
!	CACTCGGGATCTTCCCATTT+TGG	-	Chr1:27993356-27993375	None:intergenic	50.0%
!	CATTTTTCCGCGCTTTGTGC+TGG	+	Chr1:27995084-27995103	MsG0180001837.01.T01:three_prime_UTR	50.0%
!	GGCTGGCCACTAATAACTAC+AGG	-	Chr1:27994211-27994230	None:intergenic	50.0%
!!	CCTAAACAAGGTGCTGCTTG+GGG	+	Chr1:27991764-27991783	MsG0180001837.01.T01:CDS	50.0%
!!!	CATCGCATCGTGGTTTTGAG+TGG	+	Chr1:27994245-27994264	MsG0180001837.01.T01:intron	50.0%
!!!	GCCATCTATGAGTTTTGGGG+TGG	-	Chr1:27994828-27994847	None:intergenic	50.0%
!!!	TCTATGAGTTTTGGGGTGGC+AGG	-	Chr1:27994824-27994843	None:intergenic	50.0%
	ACTAGGTGGGGTCAGCTACA+TGG	-	Chr1:27992688-27992707	None:intergenic	55.0%
	AGCATTGCCAGCACAAAGCG+CGG	-	Chr1:27995094-27995113	None:intergenic	55.0%
	AGCCACCTTATCCCACTAGG+TGG	-	Chr1:27992702-27992721	None:intergenic	55.0%
	AGCCGCAAATGAGTCGAACC+AGG	+	Chr1:27993662-27993681	MsG0180001837.01.T01:CDS	55.0%
	AGGGGGAAAACAGAAGCCTG+GGG	-	Chr1:27994369-27994388	None:intergenic	55.0%
	ATGAAGCCCTTTCGGAGGAG+AGG	-	Chr1:27994538-27994557	None:intergenic	55.0%
	ATGTAGCTGACCCCACCTAG+TGG	+	Chr1:27992687-27992706	MsG0180001837.01.T01:intron	55.0%
	CCAAGCCACCTTATCCCACT+AGG	-	Chr1:27992705-27992724	None:intergenic	55.0%
	CCACCTTATCCCACTAGGTG+GGG	-	Chr1:27992700-27992719	None:intergenic	55.0%
	CCTAGTGGGATAAGGTGGCT+TGG	+	Chr1:27992702-27992721	MsG0180001837.01.T01:intron	55.0%
	CTAGAGGGAGAGGAAGACCT+AGG	+	Chr1:27992420-27992439	MsG0180001837.01.T01:intron	55.0%
	GAAAGCCGCACAAGATGAGG+AGG	-	Chr1:27994565-27994584	None:intergenic	55.0%
	GAAGATCCCGAGTGTGCCAA+TGG	+	Chr1:27993362-27993381	MsG0180001837.01.T01:CDS	55.0%
	GATGTGTGGCGAGACTAGAC+GGG	+	Chr1:27992248-27992267	MsG0180001837.01.T01:intron	55.0%
	GCCACCTTATCCCACTAGGT+GGG	-	Chr1:27992701-27992720	None:intergenic	55.0%
	GCGGTAGAGCCTTCAACGAT+TGG	-	Chr1:27991635-27991654	None:intergenic	55.0%
	GCGGTAGCCACACCTTTACT+CGG	+	Chr1:27994779-27994798	MsG0180001837.01.T01:intron	55.0%
	GGAAGATGAAGCCCTTTCGG+AGG	-	Chr1:27994543-27994562	None:intergenic	55.0%
	GGATGTGTGGCGAGACTAGA+CGG	+	Chr1:27992247-27992266	MsG0180001837.01.T01:intron	55.0%
	GTAGCCACACCTTTACTCGG+TGG	+	Chr1:27994782-27994801	MsG0180001837.01.T01:intron	55.0%
	GTATCGAGCCTTTGCACCTC+GGG	-	Chr1:27995043-27995062	None:intergenic	55.0%
	TAGTTGTGAGTGTGCGCCAG+TGG	+	Chr1:27993610-27993629	MsG0180001837.01.T01:CDS	55.0%
	TGACCCCACCTAGTGGGATA+AGG	+	Chr1:27992694-27992713	MsG0180001837.01.T01:intron	55.0%
	TGTAGCTGACCCCACCTAGT+GGG	+	Chr1:27992688-27992707	MsG0180001837.01.T01:intron	55.0%
	TTCAAGCCCAGCAAGTTGCC+TGG	+	Chr1:27993293-27993312	MsG0180001837.01.T01:CDS	55.0%
	TTTAGCCTCCAAGGTGGGGA+TGG	-	Chr1:27994618-27994637	None:intergenic	55.0%
!	CCCCAAGCAGCACCTTGTTT+AGG	-	Chr1:27991767-27991786	None:intergenic	55.0%
!!!	CGCATCGTGGTTTTGAGTGG+CGG	+	Chr1:27994248-27994267	MsG0180001837.01.T01:intron	55.0%
	AGCGTTGCCAGGCAACTTGC+TGG	-	Chr1:27993303-27993322	None:intergenic	60.0%
	CCCCACCTAGTGGGATAAGG+TGG	+	Chr1:27992697-27992716	MsG0180001837.01.T01:intron	60.0%
	GATCCCGAGTGTGCCAATGG+AGG	+	Chr1:27993365-27993384	MsG0180001837.01.T01:CDS	60.0%
	TACCGCGGCAGAGGAAGTTG+CGG	+	Chr1:27991649-27991668	MsG0180001837.01.T01:CDS	60.0%
	TCTAGCTGCCATCCCCACCT+TGG	+	Chr1:27994607-27994626	MsG0180001837.01.T01:intron	60.0%
	TTTAGCCCTGTCTCCGGTGC+CGG	-	Chr1:27991695-27991714	None:intergenic	60.0%
!	GCGTTGCCAGGCAACTTGCT+GGG	-	Chr1:27993302-27993321	None:intergenic	60.0%
	AGCTGCCATCCCCACCTTGG+AGG	+	Chr1:27994610-27994629	MsG0180001837.01.T01:intron	65.0%
	GGAAGTTGCGGCGGCTGTTC+CGG	+	Chr1:27991661-27991680	MsG0180001837.01.T01:CDS	65.0%
	GGCTGTTCCGGTCCCTACAC+CGG	+	Chr1:27991673-27991692	MsG0180001837.01.T01:CDS	65.0%
	TGAAGGCTCTACCGCGGCAG+AGG	+	Chr1:27991640-27991659	MsG0180001837.01.T01:CDS	65.0%
!	CTACACCGGCACCGGAGACA+GGG	+	Chr1:27991687-27991706	MsG0180001837.01.T01:CDS	65.0%
!!	CTGTCTCCGGTGCCGGTGTA+GGG	-	Chr1:27991688-27991707	None:intergenic	65.0%
	CGCCGCAACTTCCTCTGCCG+CGG	-	Chr1:27991654-27991673	None:intergenic	70.0%
	CGCGGCAGAGGAAGTTGCGG+CGG	+	Chr1:27991652-27991671	MsG0180001837.01.T01:CDS	70.0%
	TCCGGTCCCTACACCGGCAC+CGG	+	Chr1:27991679-27991698	MsG0180001837.01.T01:CDS	70.0%
!	CCTACACCGGCACCGGAGAC+AGG	+	Chr1:27991686-27991705	MsG0180001837.01.T01:CDS	70.0%
!!	CCTGTCTCCGGTGCCGGTGT+AGG	-	Chr1:27991689-27991708	None:intergenic	70.0%
!!	TCCGGTGCCGGTGTAGGGAC+CGG	-	Chr1:27991683-27991702	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	27991596	27995395	27991596	ID=MsG0180001837.01;Name=MsG0180001837.01
Chr1	mRNA	27991596	27995395	27991596	ID=MsG0180001837.01.T01;Parent=MsG0180001837.01;Name=MsG0180001837.01.T01;_AED=0.38;_eAED=0.38;_QI=21\|1\|1\|1\|1\|1\|5\|324\|208
Chr1	exon	27991596	27991837	27991596	ID=MsG0180001837.01.T01:exon:18699;Parent=MsG0180001837.01.T01
Chr1	exon	27993277	27993445	27993277	ID=MsG0180001837.01.T01:exon:18700;Parent=MsG0180001837.01.T01
Chr1	exon	27993558	27993683	27993558	ID=MsG0180001837.01.T01:exon:18701;Parent=MsG0180001837.01.T01
Chr1	exon	27994887	27994952	27994887	ID=MsG0180001837.01.T01:exon:18702;Parent=MsG0180001837.01.T01
Chr1	exon	27995027	27995395	27995027	ID=MsG0180001837.01.T01:exon:18703;Parent=MsG0180001837.01.T01
Chr1	five_prime_UTR	27991596	27991616	27991596	ID=MsG0180001837.01.T01:five_prime_utr;Parent=MsG0180001837.01.T01
Chr1	CDS	27991617	27991837	27991617	ID=MsG0180001837.01.T01:cds;Parent=MsG0180001837.01.T01
Chr1	CDS	27993277	27993445	27993277	ID=MsG0180001837.01.T01:cds;Parent=MsG0180001837.01.T01
Chr1	CDS	27993558	27993683	27993558	ID=MsG0180001837.01.T01:cds;Parent=MsG0180001837.01.T01
Chr1	CDS	27994887	27994952	27994887	ID=MsG0180001837.01.T01:cds;Parent=MsG0180001837.01.T01
Chr1	CDS	27995027	27995071	27995027	ID=MsG0180001837.01.T01:cds;Parent=MsG0180001837.01.T01
Chr1	three_prime_UTR	27995072	27995395	27995072	ID=MsG0180001837.01.T01:three_prime_utr;Parent=MsG0180001837.01.T01

Gene Sequence

>MsG0180001837.01.T01

ATGGCAACAACAGAACCAATCGTTGAAGGCTCTACCGCGGCAGAGGAAGTTGCGGCGGCTGTTCCGGTCCCTACACCGGCACCGGAGACAGGGCTAAAACACAAACTAGAGAGAAGATGGACTTTCTGGTTCGATAACCAATCCAAACCTAAACAAGGTGCTGCTTGGGGAACCACTCTTCGTAAGGTTTACTCCTTCGATACCGTTGAAGAGTTTTGGTGCTTGCATGATCAGATATTCAAGCCCAGCAAGTTGCCTGGCAACGCTGACTTTCACTTGTTTAAGGATGGGATTGAACCAAAATGGGAAGATCCCGAGTGTGCCAATGGAGGAAAGTGGACTCTCACCAGCAAATCAAAGGGCAATCTTGATACCATGTGGCTCGAAACTTTGATGGCTTTGATTGGTGAGCAATTTGGAGACACTGAGGACATTTGCGGCGTAGTTGTGAGTGTGCGCCAGTGGCAAGACAAAATTTCGTTGTGGACAAAAACAGCCGCAAATGAGTCGAACCAGATGAGCATTGGAAGGAAGTGGAAAGAAATCATTGATGTTAGCGACAAGATGACATATAACTTTCATGAAGATGCTAAAACCCGAGGTGCAAAGGCTCGATACACTGTATAG

Protein sequence

>MsG0180001837.01.T01

MATTEPIVEGSTAAEEVAAAVPVPTPAPETGLKHKLERRWTFWFDNQSKPKQGAAWGTTLRKVYSFDTVEEFWCLHDQIFKPSKLPGNADFHLFKDGIEPKWEDPECANGGKWTLTSKSKGNLDTMWLETLMALIGEQFGDTEDICGVVVSVRQWQDKISLWTKTAANESNQMSIGRKWKEIIDVSDKMTYNFHEDAKTRGAKARYTV*