AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005985.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005985.01.T01 MTR_1g111250 79.438 569 47 7 1 517 1 551 0.0 888
MsG0180005985.01.T01 MTR_8g104110 46.655 583 204 14 9 513 6 559 3.12e-160 476
MsG0180005985.01.T01 MTR_6g084680 47.138 594 201 12 10 513 10 580 1.23e-159 475
MsG0180005985.01.T01 MTR_8g104120 46.735 582 203 13 9 513 6 557 5.02e-157 468
MsG0180005985.01.T01 MTR_8g104130 47.656 512 181 9 70 513 55 547 5.03e-143 431
MsG0180005985.01.T01 MTR_1g115175 28.800 500 295 10 70 519 33 521 6.91e-53 192
MsG0180005985.01.T01 MTR_1g077670 29.565 460 249 11 68 508 46 449 7.29e-50 182
MsG0180005985.01.T01 MTR_1g115140 28.834 489 278 14 70 509 37 504 5.18e-49 181
MsG0180005985.01.T01 MTR_1g077660 29.011 455 252 10 68 508 40 437 4.47e-48 177
MsG0180005985.01.T01 MTR_4g098570 31.224 474 283 11 73 513 48 511 5.92e-48 178
MsG0180005985.01.T01 MTR_1g115190 29.586 507 275 13 70 519 34 515 1.79e-46 174
MsG0180005985.01.T01 MTR_5g014310 28.423 482 283 14 73 509 56 520 2.10e-43 165
MsG0180005985.01.T01 MTR_2g087288 31.845 336 189 9 71 385 34 350 2.45e-41 157
MsG0180005985.01.T01 MTR_7g094770 27.811 338 198 9 79 392 61 376 6.96e-39 150
MsG0180005985.01.T01 MTR_4g051575 29.023 348 208 9 74 401 41 369 4.67e-38 148
MsG0180005985.01.T01 MTR_7g106260 28.909 339 201 8 65 385 36 352 1.29e-37 147
MsG0180005985.01.T01 MTR_4g098610 28.694 467 294 9 73 509 48 505 3.35e-36 144
MsG0180005985.01.T01 MTR_1g111270 100.000 71 0 0 642 712 1 71 4.31e-36 144
MsG0180005985.01.T01 MTR_2g087285 28.205 351 226 7 69 405 32 370 2.42e-34 137
MsG0180005985.01.T01 MTR_6g084690 91.549 71 6 0 642 712 1 71 6.80e-33 135
MsG0180005985.01.T01 MTR_4g051575 28.400 250 151 8 160 401 6 235 1.27e-23 103
MsG0180005985.01.T01 MTR_6g015325 53.425 73 33 1 124 196 14 85 4.54e-21 89.0
MsG0180005985.01.T01 MTR_1g077870 52.055 73 34 1 124 196 199 270 2.45e-18 86.7
MsG0180005985.01.T01 MTR_0710s0020 37.589 141 73 4 70 196 34 173 1.66e-15 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005985.01.T01 AT1G25480 52.632 570 171 12 18 513 1 545 0.0 528
MsG0180005985.01.T01 AT2G17470 48.595 605 194 12 1 541 9 560 1.93e-172 506
MsG0180005985.01.T01 AT2G17470 49.829 586 177 12 20 541 6 538 3.86e-172 505
MsG0180005985.01.T01 AT3G18440 47.973 592 196 12 8 510 2 570 2.28e-169 500
MsG0180005985.01.T01 AT1G68600 52.539 512 151 11 71 513 45 533 1.98e-166 490
MsG0180005985.01.T01 AT1G18420 43.568 583 220 16 12 513 27 581 1.99e-138 420
MsG0180005985.01.T01 AT1G18420 45.665 519 181 12 75 513 1 498 3.56e-133 404
MsG0180005985.01.T01 AT5G46610 28.544 515 292 14 54 509 21 518 1.35e-52 191
MsG0180005985.01.T01 AT4G17970 30.087 462 276 13 70 504 35 476 1.99e-51 188
MsG0180005985.01.T01 AT5G46600 27.308 520 305 12 56 515 24 530 1.79e-48 180
MsG0180005985.01.T01 AT5G46610 27.129 505 288 14 54 509 21 494 4.00e-47 175
MsG0180005985.01.T01 AT5G46610 26.733 505 267 14 54 509 21 471 1.55e-43 165
MsG0180005985.01.T01 AT4G00910 26.609 466 266 12 68 508 52 466 1.07e-42 162
MsG0180005985.01.T01 AT1G08430 29.014 355 221 8 66 401 5 347 2.36e-41 158
MsG0180005985.01.T01 AT1G08440 28.571 343 219 6 66 393 5 336 1.39e-40 156
MsG0180005985.01.T01 AT3G11680 29.885 348 204 10 52 385 27 348 2.96e-39 152
MsG0180005985.01.T01 AT3G11680 29.885 348 204 10 52 385 25 346 3.30e-39 152
MsG0180005985.01.T01 AT2G27240 25.067 371 238 8 66 401 5 370 3.02e-36 144
MsG0180005985.01.T01 AT2G27240 25.348 359 226 8 66 401 5 344 7.22e-36 142
MsG0180005985.01.T01 AT3G25800 97.183 71 2 0 642 712 1 71 4.38e-35 141
MsG0180005985.01.T01 AT3G25800 97.183 71 2 0 642 712 1 71 7.35e-35 140
MsG0180005985.01.T01 AT3G25800 97.183 71 2 0 642 712 1 71 7.35e-35 140
MsG0180005985.01.T01 AT1G25490 94.366 71 4 0 642 712 1 71 7.13e-34 138
MsG0180005985.01.T01 AT1G13320 92.958 71 5 0 642 712 1 71 4.14e-33 135
MsG0180005985.01.T01 AT1G13320 92.958 71 5 0 642 712 1 71 6.56e-33 135
MsG0180005985.01.T01 AT1G13320 92.958 71 5 0 642 712 1 71 6.56e-33 135

Find 139 sgRNAs with CRISPR-Local

Find 471 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTTAGCAAATACTCTATT+TGG 0.105742 1:+98489198 MsG0180005985.01.T01:CDS
ATATTTGCATTTACCCTATT+TGG 0.223527 1:+98490073 MsG0180005985.01.T01:CDS
AGGCTTGATATACGAGAATT+TGG 0.236813 1:-98490346 None:intergenic
TCAGAATTTGGACACTTCTA+AGG 0.277540 1:+98494419 MsG0180005985.01.T01:intron
CAAAGTTAAACCAGCTTTCA+TGG 0.289370 1:-98489138 None:intergenic
TTCTAGTCAATTCAGAGAAC+TGG 0.302168 1:+98491475 MsG0180005985.01.T01:CDS
TCAGCAGGAGTGCTTGCTAT+AGG 0.325055 1:+98489537 MsG0180005985.01.T01:CDS
ATTGAGGCATTGTGCTTTCA+TGG 0.329597 1:+98490675 MsG0180005985.01.T01:CDS
TGACACTCCAAACACTCTTT+TGG 0.336200 1:-98494223 None:intergenic
AACAAGGTTCAATCGTGCTT+TGG 0.339627 1:+98489506 MsG0180005985.01.T01:CDS
CAGCAGGAGTGCTTGCTATA+GGG 0.347935 1:+98489538 MsG0180005985.01.T01:CDS
CAACTACTTCACTTCAATAT+AGG 0.349594 1:-98491878 None:intergenic
AAATGGAATTAATTCCTTAC+GGG 0.350769 1:-98496393 None:intergenic
AAGTGCTAGCTCTTTGTCTT+TGG 0.352205 1:+98491748 MsG0180005985.01.T01:CDS
TTTCCAACATATGTGCTAAC+AGG 0.354317 1:+98494472 MsG0180005985.01.T01:CDS
TAGCCTTCTCACCAAGATCT+TGG 0.356166 1:-98491832 None:intergenic
AGATCCTCTCCGGACCAAAT+AGG 0.358607 1:-98490087 None:intergenic
ATTAATTCTTTCAGAACTAC+TGG 0.361507 1:+98496223 MsG0180005985.01.T01:intron
TTGGAGACCAAAAGAGTGTT+TGG 0.363640 1:+98494216 MsG0180005985.01.T01:CDS
ACAAGGTTCAATCGTGCTTT+GGG 0.364978 1:+98489507 MsG0180005985.01.T01:CDS
AAGATCTAAACAACTGCGTT+TGG 0.372584 1:-98489012 None:intergenic
AGATCTAAACAACTGCGTTT+GGG 0.376050 1:-98489011 None:intergenic
CCCGGATATGAGATACGATA+TGG 0.381010 1:-98494181 None:intergenic
ACTTAGCAAATACTCTATTT+GGG 0.383113 1:+98489199 MsG0180005985.01.T01:CDS
AGCACGATTGAACCTTGTTA+AGG 0.384353 1:-98489502 None:intergenic
CGGAGAGGATCTCCACAAAT+TGG 0.386583 1:+98490098 MsG0180005985.01.T01:CDS
TCCACCATTGCACGTGCTCT+TGG 0.395287 1:+98496359 MsG0180005985.01.T01:CDS
GATCCTCTCCGGACCAAATA+GGG 0.396798 1:-98490086 None:intergenic
TGCATTTACCCTATTTGGTC+CGG 0.405761 1:+98490078 MsG0180005985.01.T01:CDS
AAAATGGAATTAATTCCTTA+CGG 0.406975 1:-98496394 None:intergenic
TATTCATAAGTCTTCATTGC+AGG 0.407682 1:-98489919 None:intergenic
AGAACTAAACAATATGTCTA+TGG 0.410063 1:+98496247 MsG0180005985.01.T01:CDS
TGTGTTGCTCCCACCTTTGG+AGG 0.410385 1:+98496513 MsG0180005985.01.T01:CDS
GGAGTTGCTGCATCTTTAGA+AGG 0.411312 1:+98490138 MsG0180005985.01.T01:CDS
GTTCTTATTGGTGTTGGTGC+TGG 0.412393 1:+98490033 MsG0180005985.01.T01:CDS
TCCATATCGTATCTCATATC+CGG 0.414676 1:+98494180 MsG0180005985.01.T01:CDS
CAACACCAGGCTAAAGGAAA+TGG 0.415087 1:+98491510 MsG0180005985.01.T01:CDS
GCACGATTGAACCTTGTTAA+GGG 0.417668 1:-98489501 None:intergenic
ATTGTCCATTTCCTTTAGCC+TGG 0.418500 1:-98491515 None:intergenic
CATGAAAGCTGGTTTAACTT+TGG 0.419485 1:+98489139 MsG0180005985.01.T01:CDS
CTTTCATAAACTTTAGATTC+CGG 0.420024 1:-98491728 None:intergenic
AGACTAACCGAAAAGCTTAG+AGG 0.422043 1:-98494279 None:intergenic
TCTCATATTCAACACATTGT+AGG 0.426124 1:-98490314 None:intergenic
TAGTGTGTTGCTCCCACCTT+TGG 0.428581 1:+98496510 MsG0180005985.01.T01:CDS
AGTTCTCTGAATTGACTAGA+AGG 0.439619 1:-98491473 None:intergenic
GAGAGGAAAGGAAACAAAGT+TGG 0.439813 1:+98495555 MsG0180005985.01.T01:CDS
ACAAGATGTTCAATTATCCT+TGG 0.454137 1:+98490626 MsG0180005985.01.T01:CDS
GTGGATGAATTCCAAGATCT+TGG 0.457362 1:+98491821 MsG0180005985.01.T01:CDS
AGGAAGCAAAGTAGAAAAGA+TGG 0.457911 1:+98491368 MsG0180005985.01.T01:CDS
GGATAATTGAACATCTTGTA+TGG 0.459424 1:-98490622 None:intergenic
ATGCATACTTTCAGAAATAC+AGG 0.461495 1:+98490714 MsG0180005985.01.T01:CDS
CTTCAGAAGGTGGGTGCTGA+AGG 0.463696 1:+98491324 MsG0180005985.01.T01:CDS
TCTATAGATGCTAACTTGCT+AGG 0.466623 1:+98490249 MsG0180005985.01.T01:CDS
TCACTACTGCTTACATGTCT+TGG 0.469745 1:-98494510 None:intergenic
TCTTGCAATGGCCGAAGAGT+TGG 0.477668 1:+98496451 MsG0180005985.01.T01:CDS
CTCGTCTATAAGCACGGCTA+TGG 0.479500 1:-98496288 None:intergenic
ATGATACTAAGCCTTGTTCA+TGG 0.480504 1:-98491664 None:intergenic
GAATGAAAACTCCAACTCTT+CGG 0.481646 1:-98496462 None:intergenic
TAGATGCTAACTTGCTAGGT+TGG 0.482058 1:+98490253 MsG0180005985.01.T01:CDS
AGATTGGTTCTTATTGGTGT+TGG 0.483832 1:+98490027 MsG0180005985.01.T01:CDS
TACACACGTGCCACGGGCAA+CGG 0.494661 1:+98495579 MsG0180005985.01.T01:CDS
GTTCTATAACCGCGATAAAG+AGG 0.497202 1:-98490377 None:intergenic
CAATTTGTGGAGATCCTCTC+CGG 0.499614 1:-98490097 None:intergenic
ATGAACAAGGCTTAGTATCA+TGG 0.503647 1:+98491666 MsG0180005985.01.T01:CDS
GGAACGTCAGCAACAAGAAT+CGG 0.506554 1:+98488894 MsG0180005985.01.T01:CDS
AGAAGCTATGTCAAACTTAG+TGG 0.506753 1:+98490649 MsG0180005985.01.T01:CDS
CGCGTTGTCAACATTCGTAA+TGG 0.507325 1:+98489050 MsG0180005985.01.T01:CDS
TTCAATATAGGTTCATCAAA+GGG 0.509513 1:-98491866 None:intergenic
AACTTCAGAATGTATGTTAG+TGG 0.512439 1:+98494444 MsG0180005985.01.T01:CDS
AGACACCAACACAATACAAA+AGG 0.512881 1:-98489965 None:intergenic
TGTTCGACTCCACCAACATA+AGG 0.514810 1:-98496484 None:intergenic
GCTTTGGGAACAATTTCAGC+AGG 0.515832 1:+98489522 MsG0180005985.01.T01:CDS
GCATTGTGGGAGCCACCTCA+TGG 0.521196 1:+98490598 MsG0180005985.01.T01:CDS
CTCTCCAAGAGCACGTGCAA+TGG 0.521419 1:-98496363 None:intergenic
CTTCAATATAGGTTCATCAA+AGG 0.522584 1:-98491867 None:intergenic
GAATTGAGTTCAACCGCAGT+TGG 0.526541 1:-98496328 None:intergenic
GCAATGAAGACTTATGAATA+CGG 0.527141 1:+98489922 MsG0180005985.01.T01:CDS
CACCCTGTTAGCACATATGT+TGG 0.528165 1:-98494475 None:intergenic
TACAATGTGTTGAATATGAG+AGG 0.531596 1:+98490316 MsG0180005985.01.T01:CDS
AGTTGGTTACACACGTGCCA+CGG 0.532046 1:+98495572 MsG0180005985.01.T01:CDS
TGCAAGACTTCAAAATCTTG+TGG 0.534001 1:+98491802 MsG0180005985.01.T01:CDS
GTAAGACAACACCAGGCTAA+AGG 0.536009 1:+98491504 MsG0180005985.01.T01:CDS
TCGTCTATAAGCACGGCTAT+GGG 0.538011 1:-98496287 None:intergenic
CCATATCGTATCTCATATCC+GGG 0.538196 1:+98494181 MsG0180005985.01.T01:CDS
CTTTCAAGAACTTCAGAAGG+TGG 0.539570 1:+98491314 MsG0180005985.01.T01:CDS
TCCAAGAGCACGTGCAATGG+TGG 0.547000 1:-98496360 None:intergenic
ATTCTTTCAAGAACTTCAGA+AGG 0.551279 1:+98491311 MsG0180005985.01.T01:CDS
CAAGCTCTACATTATGAGCC+AGG 0.552660 1:+98494314 MsG0180005985.01.T01:CDS
TTTCAAGAACTTCAGAAGGT+GGG 0.557719 1:+98491315 MsG0180005985.01.T01:CDS
GCATTGTGCTTTCATGGTCA+TGG 0.558820 1:+98490681 MsG0180005985.01.T01:CDS
GCTAAAGTACTGCGTCAACT+AGG 0.561925 1:+98491348 MsG0180005985.01.T01:CDS
TCAGACACAGTATCTTAGAA+AGG 0.562106 1:+98488922 MsG0180005985.01.T01:CDS
CCCAACAAAATGCAATCACA+TGG 0.566488 1:+98488873 None:intergenic
AGCACGGCTATGGGATAAAG+TGG 0.566881 1:-98496278 None:intergenic
TTGATATACGAGAATTTGGA+TGG 0.568580 1:-98490342 None:intergenic
TGATGCTATACTGAATGAGC+CGG 0.569924 1:+98491709 MsG0180005985.01.T01:CDS
TGGAGAGGAGCGAACCCGTA+AGG 0.570076 1:+98496379 MsG0180005985.01.T01:CDS
TTTGAGCTCGTCTATAAGCA+CGG 0.570354 1:-98496294 None:intergenic
GTTGGTTACACACGTGCCAC+GGG 0.575192 1:+98495573 MsG0180005985.01.T01:CDS
CATAGGCACCTCCAGAAAAG+AGG 0.575706 1:+98491283 MsG0180005985.01.T01:intron
ATTCCAAGATCTTGGTGAGA+AGG 0.576607 1:+98491829 MsG0180005985.01.T01:CDS
TAAACAACTGCGTTTGGGGA+CGG 0.577769 1:-98489006 None:intergenic
TTCTATAACCGCGATAAAGA+GGG 0.578619 1:-98490376 None:intergenic
TTCATGGTCATGGCAATGCA+TGG 0.579786 1:+98490691 MsG0180005985.01.T01:CDS
GTGTTGGTGTCTGGAAGAGA+TGG 0.581885 1:+98489976 MsG0180005985.01.T01:CDS
TCTAGTCAATTCAGAGAACT+GGG 0.583951 1:+98491476 MsG0180005985.01.T01:CDS
TTTACTTTCACCGTTGCCCG+TGG 0.584865 1:-98495589 None:intergenic
GATCTAAACAACTGCGTTTG+GGG 0.588933 1:-98489010 None:intergenic
AATCTTCATCTGCAATAGCT+CGG 0.589776 1:-98491436 None:intergenic
ATTAGGTGCAACCCTTAACA+AGG 0.590894 1:+98489490 MsG0180005985.01.T01:intron
AGCAATTAATCGAAGAAGAG+AGG 0.591491 1:+98495538 MsG0180005985.01.T01:CDS
TTAATTCTTTCAGAACTACT+GGG 0.602836 1:+98496224 MsG0180005985.01.T01:intron
TTCTAAGATACTGTGTCTGA+AGG 0.606897 1:-98488919 None:intergenic
TGATGAGGTACTTCTTGCAA+TGG 0.608554 1:+98496439 MsG0180005985.01.T01:CDS
CATTGCACGTGCTCTTGGAG+AGG 0.613082 1:+98496364 MsG0180005985.01.T01:CDS
AGTTTGACATAGCTTCTCCA+AGG 0.618992 1:-98490643 None:intergenic
TTCCAACATATGTGCTAACA+GGG 0.623870 1:+98494473 MsG0180005985.01.T01:CDS
GGCACCTCCAGAAAAGAGGT+TGG 0.626577 1:+98491287 MsG0180005985.01.T01:intron
ATCTTGTATGGACCATGAGG+TGG 0.630513 1:-98490610 None:intergenic
TTACCCTATTTGGTCCGGAG+AGG 0.632521 1:+98490083 MsG0180005985.01.T01:CDS
GGAAGCTGTAAGACAACACC+AGG 0.636992 1:+98491497 MsG0180005985.01.T01:CDS
TGCGGTTGAACTCAATTCGT+AGG 0.639004 1:+98496333 MsG0180005985.01.T01:CDS
TCTGATGACCCTCTTTATCG+CGG 0.639049 1:+98490368 MsG0180005985.01.T01:CDS
GAATAATGACGACGATGATG+AGG 0.640910 1:+98496424 MsG0180005985.01.T01:CDS
TGTTGAGGAAACCTGCGTGA+GGG 0.648564 1:+98496546 MsG0180005985.01.T01:CDS
TTAATCGAAGAAGAGAGGAA+AGG 0.653801 1:+98495543 MsG0180005985.01.T01:CDS
CATTCTGTTAGAAGTTCACG+AGG 0.656387 1:+98491410 MsG0180005985.01.T01:CDS
CTTCTAACAGAATGTCACGT+GGG 0.657197 1:-98491401 None:intergenic
CTAAAGATGCAGCAACTCCG+TGG 0.658515 1:-98490134 None:intergenic
GCGATAAAGAGGGTCATCAG+AGG 0.664229 1:-98490366 None:intergenic
ACTAAACAATATGTCTATGG+CGG 0.666538 1:+98496250 MsG0180005985.01.T01:CDS
TCAAACTTAGTGGAGCATTG+AGG 0.669712 1:+98490659 MsG0180005985.01.T01:CDS
CACAGCTTTATCCCTCACGC+AGG 0.675394 1:-98496557 None:intergenic
CAACATATGTGCTAACAGGG+TGG 0.694035 1:+98494476 MsG0180005985.01.T01:CDS
GTGTTGAGGAAACCTGCGTG+AGG 0.711414 1:+98496545 MsG0180005985.01.T01:CDS
ACTTCTAACAGAATGTCACG+TGG 0.720683 1:-98491402 None:intergenic
AAAATGATGATATCCAACTG+CGG 0.737311 1:+98496315 MsG0180005985.01.T01:CDS
AACATCTTGTATGGACCATG+AGG 0.738314 1:-98490613 None:intergenic
ACAATGTGTTGAATATGAGA+GGG 0.769241 1:+98490317 MsG0180005985.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTATTATTTTAATAAAA+AGG - Chr1:98494920-98494939 None:intergenic 0.0%
!! AATTCATAAAATTTATAATG+GGG - Chr1:98490881-98490900 None:intergenic 10.0%
!! ACAATTCATAAAATTTATAA+TGG - Chr1:98490883-98490902 None:intergenic 10.0%
!! AGTGTATTAAATAATAATAT+TGG + Chr1:98494960-98494979 MsG0180005985.01.T01:intron 10.0%
!! ATATCTTATAAATCTATATT+TGG - Chr1:98492519-98492538 None:intergenic 10.0%
!! ATATTTGAATATTAGAAAAA+CGG + Chr1:98494045-98494064 MsG0180005985.01.T01:intron 10.0%
!! CAATTCATAAAATTTATAAT+GGG - Chr1:98490882-98490901 None:intergenic 10.0%
!! TAAAAAATACAAATTTGAAA+TGG + Chr1:98491973-98491992 MsG0180005985.01.T01:intron 10.0%
!! TATTAAATAATAATATTGGT+AGG + Chr1:98494964-98494983 MsG0180005985.01.T01:intron 10.0%
!! TTAAAAATCAAATAACAAAT+TGG + Chr1:98493057-98493076 MsG0180005985.01.T01:intron 10.0%
!! TTGATATATAAATACAATTT+GGG + Chr1:98490498-98490517 MsG0180005985.01.T01:intron 10.0%
!! TTTCAAAATATCATAAAATT+TGG - Chr1:98495157-98495176 None:intergenic 10.0%
!!! ATAATGTAAGTTTAAAATTA+AGG + Chr1:98492225-98492244 MsG0180005985.01.T01:intron 10.0%
!!! TAATGTAAGTTTAAAATTAA+GGG + Chr1:98492226-98492245 MsG0180005985.01.T01:intron 10.0%
!!! TTATTTTAGTTAACATAATT+GGG - Chr1:98493794-98493813 None:intergenic 10.0%
!! AACAATTATGAAAATTTACT+TGG + Chr1:98491170-98491189 MsG0180005985.01.T01:intron 15.0%
!! AATATTCATTCTTACTTATT+TGG + Chr1:98490554-98490573 MsG0180005985.01.T01:intron 15.0%
!! ATATATATTGTTAATGTCAT+AGG + Chr1:98491266-98491285 MsG0180005985.01.T01:intron 15.0%
!! CAAATTGTATTTATATATCA+AGG - Chr1:98490499-98490518 None:intergenic 15.0%
!! CTTGATATATAAATACAATT+TGG + Chr1:98490497-98490516 MsG0180005985.01.T01:intron 15.0%
!! TGAATTGATTAATAATTGAT+TGG - Chr1:98496084-98496103 None:intergenic 15.0%
!!! AAGTAAATTTTCATAATTGT+TGG - Chr1:98491171-98491190 None:intergenic 15.0%
!!! ATATTAAATGTTTTCTAGAA+AGG - Chr1:98492178-98492197 None:intergenic 15.0%
!!! GTTATTTTAGTTAACATAAT+TGG - Chr1:98493795-98493814 None:intergenic 15.0%
!!! GTTTTTTTTTTTTTGCTTTT+TGG + Chr1:98493560-98493579 MsG0180005985.01.T01:intron 15.0%
!!! TTGAAGTAATTTTAATCTTT+AGG + Chr1:98495488-98495507 MsG0180005985.01.T01:intron 15.0%
!! AAAACAATAAAATTCAAGAG+AGG + Chr1:98493138-98493157 MsG0180005985.01.T01:intron 20.0%
!! AAAATGGAATTAATTCCTTA+CGG - Chr1:98496397-98496416 None:intergenic 20.0%
!! AAACAAATTCTATTTGGTAT+AGG + Chr1:98492582-98492601 MsG0180005985.01.T01:intron 20.0%
!! AAACAATAAAATTCAAGAGA+GGG + Chr1:98493139-98493158 MsG0180005985.01.T01:intron 20.0%
!! AACTAAAATAACTTAACTCT+TGG + Chr1:98493803-98493822 MsG0180005985.01.T01:intron 20.0%
!! ACAAACTTAAGAACAAAATA+AGG + Chr1:98493026-98493045 MsG0180005985.01.T01:intron 20.0%
!! ACTAAAATAACTTAACTCTT+GGG + Chr1:98493804-98493823 MsG0180005985.01.T01:intron 20.0%
!! ATACCAATGTTATATAACAT+TGG - Chr1:98493328-98493347 None:intergenic 20.0%
!! ATACCAATGTTATATAGTAT+TGG + Chr1:98493216-98493235 MsG0180005985.01.T01:intron 20.0%
!! ATGTACATTACCTTAAAAAT+AGG + Chr1:98492947-98492966 MsG0180005985.01.T01:intron 20.0%
!! ATTAAGACATCATTCTTAAA+TGG + Chr1:98494884-98494903 MsG0180005985.01.T01:intron 20.0%
!! ATTTACAAAGATTCTTGTAT+AGG + Chr1:98492078-98492097 MsG0180005985.01.T01:intron 20.0%
!! GGAAAATAATGCTTATTTAT+AGG + Chr1:98491230-98491249 MsG0180005985.01.T01:intron 20.0%
!! GTAGTAATATAGAAAATTTG+CGG - Chr1:98491210-98491229 None:intergenic 20.0%
!! TCATTATTCTCAGTTAAAAA+TGG - Chr1:98496413-98496432 None:intergenic 20.0%
!! TTAACATAATTGGGAAATAT+CGG - Chr1:98493785-98493804 None:intergenic 20.0%
!! TTAAGACATCATTCTTAAAT+GGG + Chr1:98494885-98494904 MsG0180005985.01.T01:intron 20.0%
!! TTAGACAAACAAATTCTATT+TGG + Chr1:98492576-98492595 MsG0180005985.01.T01:intron 20.0%
!! TTTAGCAGAAAAATAAGTAT+AGG - Chr1:98493410-98493429 None:intergenic 20.0%
!! TTTGGTATAGAATTACATAA+TGG + Chr1:98491072-98491091 MsG0180005985.01.T01:intron 20.0%
!!! AAGTCAAGTAATTTTTTGTT+TGG - Chr1:98496043-98496062 None:intergenic 20.0%
!!! AAGTTTAAAATTAAGGGTAT+AGG + Chr1:98492232-98492251 MsG0180005985.01.T01:intron 20.0%
!!! AATACTTCAAACTTTACTTT+TGG + Chr1:98496151-98496170 MsG0180005985.01.T01:intron 20.0%
!!! AATTTGTGTTTATTTTCTTG+TGG - Chr1:98492554-98492573 None:intergenic 20.0%
!!! AGAACTTTACATTTGTTTTA+GGG - Chr1:98492753-98492772 None:intergenic 20.0%
!!! ATTTATTTGTTTTTGTTGCA+AGG + Chr1:98492327-98492346 MsG0180005985.01.T01:intron 20.0%
!!! ATTTTAATAAAAAGGTGATG+TGG - Chr1:98494912-98494931 None:intergenic 20.0%
!!! GCAAATTTTCTATATTACTA+CGG + Chr1:98491209-98491228 MsG0180005985.01.T01:intron 20.0%
!!! GTAATTTTAATCTTTAGGAA+CGG + Chr1:98495493-98495512 MsG0180005985.01.T01:intron 20.0%
!!! TATTTTGTGGTAATTTTCTT+AGG + Chr1:98490276-98490295 MsG0180005985.01.T01:CDS 20.0%
!!! TCATCCATTTTTAAATATCA+GGG - Chr1:98493594-98493613 None:intergenic 20.0%
!!! TGTTCATTTTGATAATTGTT+TGG + Chr1:98490984-98491003 MsG0180005985.01.T01:intron 20.0%
!!! TTCTCTTTTCATTTACATTA+AGG + Chr1:98489169-98489188 MsG0180005985.01.T01:CDS 20.0%
!!! TTTATTTGTTTTTGTTGCAA+GGG + Chr1:98492328-98492347 MsG0180005985.01.T01:intron 20.0%
!!! TTTTAATAATAGTACCTAAC+AGG - Chr1:98495038-98495057 None:intergenic 20.0%
!!! TTTTATAGATTGGTTCTTAT+TGG + Chr1:98490021-98490040 MsG0180005985.01.T01:CDS 20.0%
!!! TTTTTTTTCTTTCTGAGATT+AGG + Chr1:98489473-98489492 MsG0180005985.01.T01:intron 20.0%
! AAAGCCCTGATATTTAAAAA+TGG + Chr1:98493587-98493606 MsG0180005985.01.T01:intron 25.0%
! AAATGAACAACATTCAACTT+TGG - Chr1:98492311-98492330 None:intergenic 25.0%
! AAATGGAATTAATTCCTTAC+GGG - Chr1:98496396-98496415 None:intergenic 25.0%
! AACTTAGCAAATACTCTATT+TGG + Chr1:98489198-98489217 MsG0180005985.01.T01:CDS 25.0%
! AAGTTGAAGATGAATTGAAA+AGG - Chr1:98495860-98495879 None:intergenic 25.0%
! AATAATTGATTGGCGTAATT+AGG - Chr1:98496074-98496093 None:intergenic 25.0%
! AATGAACAACATTCAACTTT+GGG - Chr1:98492310-98492329 None:intergenic 25.0%
! ACTCCTATATTATATCCAAA+AGG - Chr1:98493899-98493918 None:intergenic 25.0%
! ACTTAGCAAATACTCTATTT+GGG + Chr1:98489199-98489218 MsG0180005985.01.T01:CDS 25.0%
! AGAACTAAACAATATGTCTA+TGG + Chr1:98496247-98496266 MsG0180005985.01.T01:CDS 25.0%
! AGTAAGAATGAATATTAGAC+AGG - Chr1:98490550-98490569 None:intergenic 25.0%
! AGTATATGATTGTATTGTTG+TGG + Chr1:98489857-98489876 MsG0180005985.01.T01:intron 25.0%
! ATATAACATTGGTATCCTAA+TGG - Chr1:98493211-98493230 None:intergenic 25.0%
! ATATTTGCATTTACCCTATT+TGG + Chr1:98490073-98490092 MsG0180005985.01.T01:CDS 25.0%
! ATTAATTCTTTCAGAACTAC+TGG + Chr1:98496223-98496242 MsG0180005985.01.T01:intron 25.0%
! ATTGTGGAAAAAAAAAGTGA+GGG + Chr1:98494840-98494859 MsG0180005985.01.T01:intron 25.0%
! CAAATAGTAATAGTCATTCA+CGG + Chr1:98493094-98493113 MsG0180005985.01.T01:intron 25.0%
! CATAATTCAGAACTTATTAG+TGG - Chr1:98492051-98492070 None:intergenic 25.0%
! CTTTCATAAACTTTAGATTC+CGG - Chr1:98491731-98491750 None:intergenic 25.0%
! GTATAGGAACAAAATTAAGT+TGG + Chr1:98492094-98492113 MsG0180005985.01.T01:intron 25.0%
! GTATATGATTGTATTGTTGT+GGG + Chr1:98489858-98489877 MsG0180005985.01.T01:intron 25.0%
! TAACATAATTGGGAAATATC+GGG - Chr1:98493784-98493803 None:intergenic 25.0%
! TACTCCTAAAAAAATAGAAC+TGG - Chr1:98492842-98492861 None:intergenic 25.0%
! TAGCCAATGTTATATAACAT+TGG + Chr1:98493322-98493341 MsG0180005985.01.T01:intron 25.0%
! TATATGATTGTATTGTTGTG+GGG + Chr1:98489859-98489878 MsG0180005985.01.T01:intron 25.0%
! TATATTGAAGTGAAGTAGTT+GGG + Chr1:98491880-98491899 MsG0180005985.01.T01:intron 25.0%
! TCAAAAATCAAGATACGATA+CGG - Chr1:98494125-98494144 None:intergenic 25.0%
! TGACCAATACTATATAACAT+TGG - Chr1:98493222-98493241 None:intergenic 25.0%
! TTAATTCTTTCAGAACTACT+GGG + Chr1:98496224-98496243 MsG0180005985.01.T01:intron 25.0%
! TTCAATATAGGTTCATCAAA+GGG - Chr1:98491869-98491888 None:intergenic 25.0%
!! CGAATTTCTGAAAATGAAAA+CGG - Chr1:98490190-98490209 None:intergenic 25.0%
!! GAATTTCTGAAAATGAAAAC+GGG - Chr1:98490189-98490208 None:intergenic 25.0%
!! GTTCCTTTTGGATATAATAT+AGG + Chr1:98493893-98493912 MsG0180005985.01.T01:intron 25.0%
!! TATATAACATTGGCTAATGA+AGG - Chr1:98493318-98493337 None:intergenic 25.0%
!! TATTTTCTTGTGGATAATGT+TGG - Chr1:98492544-98492563 None:intergenic 25.0%
!! TCCAAATTCTGAAGAAATTA+CGG - Chr1:98494411-98494430 None:intergenic 25.0%
!! TTTTTCTTTCTTAAGCTGAA+TGG + Chr1:98489645-98489664 MsG0180005985.01.T01:intron 25.0%
!!! AACTAAGGTTCTAAAACTTT+TGG + Chr1:98493469-98493488 MsG0180005985.01.T01:intron 25.0%
!!! ACATGCTCTTATTTTGTATT+TGG - Chr1:98492931-98492950 None:intergenic 25.0%
!!! ATTTTCTTAGGTTGTGTAAA+TGG + Chr1:98490288-98490307 MsG0180005985.01.T01:CDS 25.0%
!!! CATGTTTATGCCTATTTTTA+AGG - Chr1:98492960-98492979 None:intergenic 25.0%
!!! GAGAACTTTACATTTGTTTT+AGG - Chr1:98492754-98492773 None:intergenic 25.0%
!!! GTCATCCATTTTTAAATATC+AGG - Chr1:98493595-98493614 None:intergenic 25.0%
!!! TATATAGTATTGGTCAATGA+AGG + Chr1:98493226-98493245 MsG0180005985.01.T01:intron 25.0%
!!! TCAAATACATTTTCAAGTCT+TGG + Chr1:98491117-98491136 MsG0180005985.01.T01:intron 25.0%
!!! TCACTTTTTTTTTCCACAAT+GGG - Chr1:98494840-98494859 None:intergenic 25.0%
!!! TCTTCCAGTTCTATTTTTTT+AGG + Chr1:98492835-98492854 MsG0180005985.01.T01:intron 25.0%
AAAAGCTTAGAGGCAAAAAA+AGG - Chr1:98494272-98494291 None:intergenic 30.0%
AAAATGATGATATCCAACTG+CGG + Chr1:98496315-98496334 MsG0180005985.01.T01:CDS 30.0%
AAACAAAAGAAACCAGTCAT+AGG - Chr1:98494019-98494038 None:intergenic 30.0%
AAAGCTTAGAGGCAAAAAAA+GGG - Chr1:98494271-98494290 None:intergenic 30.0%
AACATAATTGGGAAATATCG+GGG - Chr1:98493783-98493802 None:intergenic 30.0%
AACCAATCTATAAAAAGCAG+TGG - Chr1:98490016-98490035 None:intergenic 30.0%
AACTTCAGAATGTATGTTAG+TGG + Chr1:98494444-98494463 MsG0180005985.01.T01:CDS 30.0%
AAGGAATGAGATCTTGAATA+AGG - Chr1:98495759-98495778 None:intergenic 30.0%
AATTATTACTGCTACTGCTA+TGG - Chr1:98495727-98495746 None:intergenic 30.0%
ACAAGATGTTCAATTATCCT+TGG + Chr1:98490626-98490645 MsG0180005985.01.T01:CDS 30.0%
ACAATGTGTTGAATATGAGA+GGG + Chr1:98490317-98490336 MsG0180005985.01.T01:CDS 30.0%
ACTAAACAATATGTCTATGG+CGG + Chr1:98496250-98496269 MsG0180005985.01.T01:CDS 30.0%
ACTCTTGTATAATCTGTGTT+TGG + Chr1:98492389-98492408 MsG0180005985.01.T01:intron 30.0%
AGTATGAATTTGACTCCAAT+TGG + Chr1:98492620-98492639 MsG0180005985.01.T01:intron 30.0%
ATAACTACATGTATCAGTGT+TGG + Chr1:98489782-98489801 MsG0180005985.01.T01:intron 30.0%
ATACATGCTCCATTTATTAC+TGG - Chr1:98489754-98489773 None:intergenic 30.0%
ATCTGAAAAATGTCACAGAT+GGG - Chr1:98494704-98494723 None:intergenic 30.0%
ATGATATGATGACAACTGTT+AGG - Chr1:98495191-98495210 None:intergenic 30.0%
ATGCATACTTTCAGAAATAC+AGG + Chr1:98490714-98490733 MsG0180005985.01.T01:CDS 30.0%
ATGTTGACACCAGTAATAAA+TGG + Chr1:98489742-98489761 MsG0180005985.01.T01:intron 30.0%
ATTAACCACATGTTCATACA+TGG - Chr1:98490842-98490861 None:intergenic 30.0%
ATTCTTTCAAGAACTTCAGA+AGG + Chr1:98491311-98491330 MsG0180005985.01.T01:CDS 30.0%
CAACTACTTCACTTCAATAT+AGG - Chr1:98491881-98491900 None:intergenic 30.0%
CATTGTGGAAAAAAAAAGTG+AGG + Chr1:98494839-98494858 MsG0180005985.01.T01:intron 30.0%
CCAACATAAAATGATTGTGT+CGG + Chr1:98489285-98489304 MsG0180005985.01.T01:intron 30.0%
CGTGAATGACTATTACTATT+TGG - Chr1:98493096-98493115 None:intergenic 30.0%
CTACAATCTACAAACACAAA+GGG - Chr1:98492013-98492032 None:intergenic 30.0%
CTATATTGAAGTGAAGTAGT+TGG + Chr1:98491879-98491898 MsG0180005985.01.T01:intron 30.0%
CTCTAACAAAAGGTCTAATT+GGG - Chr1:98494991-98495010 None:intergenic 30.0%
CTGTAATTTCTTCACTCTTA+GGG - Chr1:98493173-98493192 None:intergenic 30.0%
CTTCAATATAGGTTCATCAA+AGG - Chr1:98491870-98491889 None:intergenic 30.0%
CTTGAAGAATGCTTATAGTA+AGG + Chr1:98492122-98492141 MsG0180005985.01.T01:intron 30.0%
GCAATGAAGACTTATGAATA+CGG + Chr1:98489922-98489941 MsG0180005985.01.T01:CDS 30.0%
GGATAATTGAACATCTTGTA+TGG - Chr1:98490625-98490644 None:intergenic 30.0%
GTATGAATTTGACTCCAATT+GGG + Chr1:98492621-98492640 MsG0180005985.01.T01:intron 30.0%
TAACTACATGTATCAGTGTT+GGG + Chr1:98489783-98489802 MsG0180005985.01.T01:intron 30.0%
TACAATCTACAAACACAAAG+GGG - Chr1:98492012-98492031 None:intergenic 30.0%
TACAATGTGTTGAATATGAG+AGG + Chr1:98490316-98490335 MsG0180005985.01.T01:CDS 30.0%
TACACATTTAAGTGAGTTGT+TGG - Chr1:98490470-98490489 None:intergenic 30.0%
TATTCATAAGTCTTCATTGC+AGG - Chr1:98489922-98489941 None:intergenic 30.0%
TCTACAATCTACAAACACAA+AGG - Chr1:98492014-98492033 None:intergenic 30.0%
TCTCATATTCAACACATTGT+AGG - Chr1:98490317-98490336 None:intergenic 30.0%
TGGATATAATATAGGAGTGA+TGG + Chr1:98493901-98493920 MsG0180005985.01.T01:intron 30.0%
TGTAATTTCTTCACTCTTAG+GGG - Chr1:98493172-98493191 None:intergenic 30.0%
TTGATATACGAGAATTTGGA+TGG - Chr1:98490345-98490364 None:intergenic 30.0%
TTGTTGAATTGTTGCGATTT+AGG - Chr1:98495794-98495813 None:intergenic 30.0%
TTTGTACTGTTAGATTGTTG+CGG + Chr1:98493384-98493403 MsG0180005985.01.T01:intron 30.0%
TTTGTGTTTGTAGATTGTAG+AGG + Chr1:98492013-98492032 MsG0180005985.01.T01:intron 30.0%
! AAATTCTGAAGAAATTACGG+GGG - Chr1:98494408-98494427 None:intergenic 30.0%
! AACACTAACAATGTTCCTTT+TGG + Chr1:98493881-98493900 MsG0180005985.01.T01:intron 30.0%
! AATTTTTGACGACCAATTTG+TGG - Chr1:98490113-98490132 None:intergenic 30.0%
! ACACAATCATTTTATGTTGG+TGG - Chr1:98489285-98489304 None:intergenic 30.0%
! ACAGTTAGATTTTGCATTGT+GGG + Chr1:98490585-98490604 MsG0180005985.01.T01:intron 30.0%
! ATATCATGTTGCAAGTGTTT+TGG - Chr1:98490957-98490976 None:intergenic 30.0%
! CAAATTCTGAAGAAATTACG+GGG - Chr1:98494409-98494428 None:intergenic 30.0%
! CAATTAGACCTTTTGTTAGA+GGG + Chr1:98494990-98495009 MsG0180005985.01.T01:intron 30.0%
! CCAAATTCTGAAGAAATTAC+GGG - Chr1:98494410-98494429 None:intergenic 30.0%
! CCTAAAGAAAAAGTTTTCAG+TGG + Chr1:98492785-98492804 MsG0180005985.01.T01:intron 30.0%
! GTTAACCTTTTGTATTGTGT+TGG + Chr1:98489960-98489979 MsG0180005985.01.T01:CDS 30.0%
! TATCATGTTGCAAGTGTTTT+GGG - Chr1:98490956-98490975 None:intergenic 30.0%
! TATGCATGTAAAGTGTTATG+TGG - Chr1:98493256-98493275 None:intergenic 30.0%
! TGTCTAAGATAGATCTTTCT+TGG + Chr1:98494746-98494765 MsG0180005985.01.T01:intron 30.0%
! TTGAACATGTTTTCAATCTG+AGG + Chr1:98489347-98489366 MsG0180005985.01.T01:intron 30.0%
! TTTAGAACCTTAGTTGTGTA+GGG - Chr1:98493464-98493483 None:intergenic 30.0%
!! CCACTGAAAACTTTTTCTTT+AGG - Chr1:98492788-98492807 None:intergenic 30.0%
!! CTTCAAACTTTACTTTTGGT+TGG + Chr1:98496155-98496174 MsG0180005985.01.T01:intron 30.0%
!! TATAGGCATTGAATTTGACA+TGG + Chr1:98491932-98491951 MsG0180005985.01.T01:intron 30.0%
!! TTACTTTTGGTTGGAACTTA+GGG + Chr1:98496164-98496183 MsG0180005985.01.T01:intron 30.0%
!! TTAGACATACATGGCTTTAT+AGG + Chr1:98491915-98491934 MsG0180005985.01.T01:intron 30.0%
!! TTGAAATACCCTTTTTGGAA+CGG + Chr1:98493494-98493513 MsG0180005985.01.T01:intron 30.0%
!! TTTACTTTTGGTTGGAACTT+AGG + Chr1:98496163-98496182 MsG0180005985.01.T01:intron 30.0%
!!! CACTTTTTTTTTCCACAATG+GGG - Chr1:98494839-98494858 None:intergenic 30.0%
!!! CAGTGTATTCTTTTTTAGCA+AGG - Chr1:98488962-98488981 None:intergenic 30.0%
!!! CTCACTTTTTTTTTCCACAA+TGG - Chr1:98494841-98494860 None:intergenic 30.0%
!!! TGGATATAGTGCTTCTTTTT+TGG + Chr1:98493845-98493864 MsG0180005985.01.T01:intron 30.0%
!!! TGGTTTTGAAATACCCTTTT+TGG + Chr1:98493489-98493508 MsG0180005985.01.T01:intron 30.0%
!!! TTATTTTACGTCACTTTTGC+TGG - Chr1:98495372-98495391 None:intergenic 30.0%
!!! TTTTAGAACCTTAGTTGTGT+AGG - Chr1:98493465-98493484 None:intergenic 30.0%
!!! TTTTTTGCCTCTAAGCTTTT+CGG + Chr1:98494272-98494291 MsG0180005985.01.T01:CDS 30.0%
AAGATCTAAACAACTGCGTT+TGG - Chr1:98489015-98489034 None:intergenic 35.0%
AAGTGAGTTGTTGGAAAAGA+GGG - Chr1:98490461-98490480 None:intergenic 35.0%
AATACTCTCCTGATACGTAT+CGG - Chr1:98493734-98493753 None:intergenic 35.0%
AATCTTCATCTGCAATAGCT+CGG - Chr1:98491439-98491458 None:intergenic 35.0%
AGAAGCTATGTCAAACTTAG+TGG + Chr1:98490649-98490668 MsG0180005985.01.T01:CDS 35.0%
AGACACCAACACAATACAAA+AGG - Chr1:98489968-98489987 None:intergenic 35.0%
AGATCTAAACAACTGCGTTT+GGG - Chr1:98489014-98489033 None:intergenic 35.0%
AGCAATTAATCGAAGAAGAG+AGG + Chr1:98495538-98495557 MsG0180005985.01.T01:CDS 35.0%
AGCTAATCCTAAGGATTTAG+AGG - Chr1:98493530-98493549 None:intergenic 35.0%
AGGAAGCAAAGTAGAAAAGA+TGG + Chr1:98491368-98491387 MsG0180005985.01.T01:CDS 35.0%
AGGCTTGATATACGAGAATT+TGG - Chr1:98490349-98490368 None:intergenic 35.0%
AGTCACACTTTAGACATACA+TGG + Chr1:98491906-98491925 MsG0180005985.01.T01:intron 35.0%
AGTTCTCTGAATTGACTAGA+AGG - Chr1:98491476-98491495 None:intergenic 35.0%
ATACTCTTCTGATACGTATC+GGG - Chr1:98493664-98493683 None:intergenic 35.0%
ATCCAAAAACTCTACGAGAT+GGG + Chr1:98489086-98489105 MsG0180005985.01.T01:CDS 35.0%
ATGAACAAGGCTTAGTATCA+TGG + Chr1:98491666-98491685 MsG0180005985.01.T01:CDS 35.0%
ATGATGACCTCTAAATCCTT+AGG + Chr1:98493520-98493539 MsG0180005985.01.T01:intron 35.0%
ATGCAAGAGTTTAACAACGA+AGG - Chr1:98495992-98496011 None:intergenic 35.0%
ATGTCTTCAACTTGAAGTGT+TGG + Chr1:98489826-98489845 MsG0180005985.01.T01:intron 35.0%
ATTTAGGTCGGTAAGTATGA+AGG - Chr1:98495778-98495797 None:intergenic 35.0%
CAAAGTTAAACCAGCTTTCA+TGG - Chr1:98489141-98489160 None:intergenic 35.0%
CATTTACTAACACCTCGATA+GGG - Chr1:98492685-98492704 None:intergenic 35.0%
CCCGTAATTTCTTCAGAATT+TGG + Chr1:98494407-98494426 MsG0180005985.01.T01:intron 35.0%
CCTAAGAGTGAAGAAATTAC+AGG + Chr1:98493171-98493190 MsG0180005985.01.T01:intron 35.0%
CCTCTAACAAAAGGTCTAAT+TGG - Chr1:98494992-98495011 None:intergenic 35.0%
CCTGTAATTTCTTCACTCTT+AGG - Chr1:98493174-98493193 None:intergenic 35.0%
CTTAAGCTGAATGGAAATTG+AGG + Chr1:98489654-98489673 MsG0180005985.01.T01:intron 35.0%
GAATGAAAACTCCAACTCTT+CGG - Chr1:98496465-98496484 None:intergenic 35.0%
GATACTCTTCTGATACGTAT+CGG - Chr1:98493665-98493684 None:intergenic 35.0%
GATCTGAAAAATGTCACAGA+TGG - Chr1:98494705-98494724 None:intergenic 35.0%
GCAACAATTCAACAACACTT+TGG + Chr1:98495799-98495818 MsG0180005985.01.T01:intron 35.0%
GGTAGAATCAAAGTTGTCAA+AGG + Chr1:98492651-98492670 MsG0180005985.01.T01:intron 35.0%
GTAATTTCTTCACTCTTAGG+GGG - Chr1:98493171-98493190 None:intergenic 35.0%
GTCTGCATTCCACAATTATA+GGG - Chr1:98491149-98491168 None:intergenic 35.0%
GTTCAATGTCTAACATGTGT+TGG - Chr1:98489333-98489352 None:intergenic 35.0%
TAAAATCCTACTGACGACTA+AGG + Chr1:98492984-98493003 MsG0180005985.01.T01:intron 35.0%
TAAGTGAGTTGTTGGAAAAG+AGG - Chr1:98490462-98490481 None:intergenic 35.0%
TATCACACAAGCTAATCCTA+AGG - Chr1:98493539-98493558 None:intergenic 35.0%
TCAGAATTTGGACACTTCTA+AGG + Chr1:98494419-98494438 MsG0180005985.01.T01:intron 35.0%
TCAGACACAGTATCTTAGAA+AGG + Chr1:98488922-98488941 MsG0180005985.01.T01:CDS 35.0%
TCATTTACTAACACCTCGAT+AGG - Chr1:98492686-98492705 None:intergenic 35.0%
TCCATATCGTATCTCATATC+CGG + Chr1:98494180-98494199 MsG0180005985.01.T01:CDS 35.0%
TCTAGTCAATTCAGAGAACT+GGG + Chr1:98491476-98491495 MsG0180005985.01.T01:CDS 35.0%
TCTGAAAAATGTCACAGATG+GGG - Chr1:98494703-98494722 None:intergenic 35.0%
TGAATTGTTGCGATTTAGGT+CGG - Chr1:98495790-98495809 None:intergenic 35.0%
TGCAAAATCTAACTGTGCAA+CGG - Chr1:98490581-98490600 None:intergenic 35.0%
TGCAAGACTTCAAAATCTTG+TGG + Chr1:98491802-98491821 MsG0180005985.01.T01:CDS 35.0%
TTAATCGAAGAAGAGAGGAA+AGG + Chr1:98495543-98495562 MsG0180005985.01.T01:CDS 35.0%
TTATTCTTGTCTGATATCCC+AGG + Chr1:98494565-98494584 MsG0180005985.01.T01:intron 35.0%
TTCCAACATATGTGCTAACA+GGG + Chr1:98494473-98494492 MsG0180005985.01.T01:CDS 35.0%
TTCTAGTCAATTCAGAGAAC+TGG + Chr1:98491475-98491494 MsG0180005985.01.T01:CDS 35.0%
TTCTATAACCGCGATAAAGA+GGG - Chr1:98490379-98490398 None:intergenic 35.0%
TTGGTCGTCAAAAATTTCCA+CGG + Chr1:98490117-98490136 MsG0180005985.01.T01:CDS 35.0%
TTTCAAGAACTTCAGAAGGT+GGG + Chr1:98491315-98491334 MsG0180005985.01.T01:CDS 35.0%
TTTCCAACATATGTGCTAAC+AGG + Chr1:98494472-98494491 MsG0180005985.01.T01:CDS 35.0%
TTTGTCCATGTATGAACATG+TGG + Chr1:98490834-98490853 MsG0180005985.01.T01:intron 35.0%
! AAGAATACCAACCTCTTTTC+TGG - Chr1:98491297-98491316 None:intergenic 35.0%
! AATTCTGAAGAAATTACGGG+GGG - Chr1:98494407-98494426 None:intergenic 35.0%
! AATTTTTCCGTATCGCGTAT+CGG + Chr1:98494145-98494164 MsG0180005985.01.T01:intron 35.0%
! AGATTGGTTCTTATTGGTGT+TGG + Chr1:98490027-98490046 MsG0180005985.01.T01:CDS 35.0%
! ATTACTTAGAGCATCCACAA+TGG - Chr1:98495121-98495140 None:intergenic 35.0%
! CACAGTTAGATTTTGCATTG+TGG + Chr1:98490584-98490603 MsG0180005985.01.T01:intron 35.0%
! CATGAAAGCTGGTTTAACTT+TGG + Chr1:98489139-98489158 MsG0180005985.01.T01:CDS 35.0%
! CCAATTAGACCTTTTGTTAG+AGG + Chr1:98494989-98495008 MsG0180005985.01.T01:intron 35.0%
! CCGACACAATCATTTTATGT+TGG - Chr1:98489288-98489307 None:intergenic 35.0%
! GGAGTTTTCATTCCTTATGT+TGG + Chr1:98496472-98496491 MsG0180005985.01.T01:CDS 35.0%
! GTTTTCATTCCTTATGTTGG+TGG + Chr1:98496475-98496494 MsG0180005985.01.T01:CDS 35.0%
! TCTTTTGCTTCTGTGTAGAA+GGG - Chr1:98493434-98493453 None:intergenic 35.0%
! TGTTTAAGACTCTCTCATTG+TGG - Chr1:98494791-98494810 None:intergenic 35.0%
! TTCAAACTCTTTGCTAGCTT+AGG - Chr1:98493353-98493372 None:intergenic 35.0%
! TTCTTTTGCTTCTGTGTAGA+AGG - Chr1:98493435-98493454 None:intergenic 35.0%
! TTTTACACAGACCATGAACA+AGG + Chr1:98491653-98491672 MsG0180005985.01.T01:intron 35.0%
! TTTTCGAATTCAGCATAGGT+AGG + Chr1:98489243-98489262 MsG0180005985.01.T01:intron 35.0%
!! ATGATACTAAGCCTTGTTCA+TGG - Chr1:98491667-98491686 None:intergenic 35.0%
!! ATGTTTTCAATCTGAGGTGT+CGG + Chr1:98489353-98489372 MsG0180005985.01.T01:intron 35.0%
!! CTCATCTTTGAGGTCTTAAA+TGG - Chr1:98495093-98495112 None:intergenic 35.0%
!! GCACGATTATCAGTTTTAGT+TGG + Chr1:98489564-98489583 MsG0180005985.01.T01:CDS 35.0%
!! GTTGTTTTCGAATTCAGCAT+AGG + Chr1:98489239-98489258 MsG0180005985.01.T01:intron 35.0%
!! TCTATAGATGCTAACTTGCT+AGG + Chr1:98490249-98490268 MsG0180005985.01.T01:CDS 35.0%
!! TTCTAAGATACTGTGTCTGA+AGG - Chr1:98488922-98488941 None:intergenic 35.0%
!! TTTTGTATTGTGTTGGTGTC+TGG + Chr1:98489967-98489986 MsG0180005985.01.T01:CDS 35.0%
!!! AAGCTTTTCGGTTAGTCTAA+GGG + Chr1:98494284-98494303 MsG0180005985.01.T01:CDS 35.0%
!!! CACCACTGCTTTTTATAGAT+TGG + Chr1:98490011-98490030 MsG0180005985.01.T01:CDS 35.0%
!!! CGATTATCAGTTTTAGTTGG+TGG + Chr1:98489567-98489586 MsG0180005985.01.T01:CDS 35.0%
!!! GGTACTGATGTGTTCTTTTT+TGG + Chr1:98493825-98493844 MsG0180005985.01.T01:intron 35.0%
!!! GTGCATGTTCACTTCTTTTT+TGG + Chr1:98491054-98491073 MsG0180005985.01.T01:intron 35.0%
!!! GTTATTTTTGCCATGAAAGC+TGG + Chr1:98489128-98489147 MsG0180005985.01.T01:CDS 35.0%
!!! TAAGCTTTTCGGTTAGTCTA+AGG + Chr1:98494283-98494302 MsG0180005985.01.T01:CDS 35.0%
!!! TGAAATACCCTTTTTGGAAC+GGG + Chr1:98493495-98493514 MsG0180005985.01.T01:intron 35.0%
AAAAAGGGAAAGTCCAGTGT+TGG - Chr1:98494256-98494275 None:intergenic 40.0%
AAAGATGAGAGTCTCCATTG+TGG + Chr1:98495104-98495123 MsG0180005985.01.T01:intron 40.0%
AAATCAAGATACGATACGGC+TGG - Chr1:98494121-98494140 None:intergenic 40.0%
AAATGCTTTCCTCCTGACAA+CGG - Chr1:98490817-98490836 None:intergenic 40.0%
AACAAGGTTCAATCGTGCTT+TGG + Chr1:98489506-98489525 MsG0180005985.01.T01:CDS 40.0%
AACATCTTGTATGGACCATG+AGG - Chr1:98490616-98490635 None:intergenic 40.0%
AAGAACAAAATAAGGCGCAC+AGG + Chr1:98493034-98493053 MsG0180005985.01.T01:intron 40.0%
AATCAAGATACGATACGGCT+GGG - Chr1:98494120-98494139 None:intergenic 40.0%
AATCGAGACCCTCTAACAAA+AGG - Chr1:98495001-98495020 None:intergenic 40.0%
AATGGAGACTCTCATCTTTG+AGG - Chr1:98495103-98495122 None:intergenic 40.0%
AATTCAACAACACTTTGGCG+AGG + Chr1:98495804-98495823 MsG0180005985.01.T01:intron 40.0%
ACAAGGTTCAATCGTGCTTT+GGG + Chr1:98489507-98489526 MsG0180005985.01.T01:CDS 40.0%
ACCTAATAAGTACCCCATTG+TGG + Chr1:98494824-98494843 MsG0180005985.01.T01:intron 40.0%
ACTTCTAACAGAATGTCACG+TGG - Chr1:98491405-98491424 None:intergenic 40.0%
AGAATACCAAAGTCTCCTCT+TGG - Chr1:98490421-98490440 None:intergenic 40.0%
AGACATCAAATTCTGCTTCC+TGG + Chr1:98494344-98494363 MsG0180005985.01.T01:intron 40.0%
AGACATTCCCTACACAACTA+AGG + Chr1:98493454-98493473 MsG0180005985.01.T01:intron 40.0%
AGACTAACCGAAAAGCTTAG+AGG - Chr1:98494282-98494301 None:intergenic 40.0%
AGCACGATTGAACCTTGTTA+AGG - Chr1:98489505-98489524 None:intergenic 40.0%
AGGGTATAGGATGCTTCATT+TGG + Chr1:98492245-98492264 MsG0180005985.01.T01:intron 40.0%
AGTTTGACATAGCTTCTCCA+AGG - Chr1:98490646-98490665 None:intergenic 40.0%
ATACTCTCCTGATACGTATC+GGG - Chr1:98493733-98493752 None:intergenic 40.0%
ATCATCACCCGTTCCAAAAA+GGG - Chr1:98493505-98493524 None:intergenic 40.0%
ATCATTCACAACCTCAACCA+AGG + Chr1:98494674-98494693 MsG0180005985.01.T01:intron 40.0%
ATTACTGCTACTGCTATGGA+TGG - Chr1:98495723-98495742 None:intergenic 40.0%
ATTAGGTGCAACCCTTAACA+AGG + Chr1:98489490-98489509 MsG0180005985.01.T01:intron 40.0%
ATTCCAAGATCTTGGTGAGA+AGG + Chr1:98491829-98491848 MsG0180005985.01.T01:CDS 40.0%
ATTGTCCATTTCCTTTAGCC+TGG - Chr1:98491518-98491537 None:intergenic 40.0%
ATTTGATGTCTACGAGTACC+TGG - Chr1:98494335-98494354 None:intergenic 40.0%
CAAACATGACCTTGAATCCT+GGG - Chr1:98494585-98494604 None:intergenic 40.0%
CAAAGTTGTCAAAGGAAGCA+TGG + Chr1:98492659-98492678 MsG0180005985.01.T01:intron 40.0%
CACACACCAACAAAGAAGAA+AGG - Chr1:98495676-98495695 None:intergenic 40.0%
CATCCAAAAACTCTACGAGA+TGG + Chr1:98489085-98489104 MsG0180005985.01.T01:CDS 40.0%
CATTCTGTTAGAAGTTCACG+AGG + Chr1:98491410-98491429 MsG0180005985.01.T01:CDS 40.0%
CCAAGACATGTGAACAGAAA+TGG - Chr1:98492477-98492496 None:intergenic 40.0%
CCATATCGTATCTCATATCC+GGG + Chr1:98494181-98494200 MsG0180005985.01.T01:CDS 40.0%
CCATTTCTGTTCACATGTCT+TGG + Chr1:98492474-98492493 MsG0180005985.01.T01:intron 40.0%
CGTCTTCCTTTCTTCTTTGT+TGG + Chr1:98495667-98495686 MsG0180005985.01.T01:intron 40.0%
CTTCTAACAGAATGTCACGT+GGG - Chr1:98491404-98491423 None:intergenic 40.0%
CTTTCAAGAACTTCAGAAGG+TGG + Chr1:98491314-98491333 MsG0180005985.01.T01:CDS 40.0%
GAATAATGACGACGATGATG+AGG + Chr1:98496424-98496443 MsG0180005985.01.T01:CDS 40.0%
GACAACTTTGATTCTACCAC+TGG - Chr1:98492649-98492668 None:intergenic 40.0%
GACATGTAAGCAGTAGTGAT+AGG + Chr1:98494514-98494533 MsG0180005985.01.T01:intron 40.0%
GAGAGGAAAGGAAACAAAGT+TGG + Chr1:98495555-98495574 MsG0180005985.01.T01:CDS 40.0%
GATCTAAACAACTGCGTTTG+GGG - Chr1:98489013-98489032 None:intergenic 40.0%
GCACGATTGAACCTTGTTAA+GGG - Chr1:98489504-98489523 None:intergenic 40.0%
GGTCTGCATTCCACAATTAT+AGG - Chr1:98491150-98491169 None:intergenic 40.0%
GTATCCTAATGGTACACAAG+TGG - Chr1:98493200-98493219 None:intergenic 40.0%
GTGAGGGTCTTAAAAGATGA+AGG + Chr1:98494856-98494875 MsG0180005985.01.T01:intron 40.0%
GTGGATGAATTCCAAGATCT+TGG + Chr1:98491821-98491840 MsG0180005985.01.T01:CDS 40.0%
GTTCTATAACCGCGATAAAG+AGG - Chr1:98490380-98490399 None:intergenic 40.0%
GTTGTTGGAAAAGAGGGAAA+AGG - Chr1:98490455-98490474 None:intergenic 40.0%
TAAGCAGTAGTGATAGGTTG+TGG + Chr1:98494520-98494539 MsG0180005985.01.T01:intron 40.0%
TATTGTTGTGGGGATTTGCA+GGG + Chr1:98489869-98489888 MsG0180005985.01.T01:intron 40.0%
TCACATAGGAAGGTCTAAAG+AGG - Chr1:98493291-98493310 None:intergenic 40.0%
TCACTACTGCTTACATGTCT+TGG - Chr1:98494513-98494532 None:intergenic 40.0%
TGATGCTATACTGAATGAGC+CGG + Chr1:98491709-98491728 MsG0180005985.01.T01:CDS 40.0%
TGCAACTGTTACTCACTCTT+TGG - Chr1:98494623-98494642 None:intergenic 40.0%
TGCATTTACCCTATTTGGTC+CGG + Chr1:98490078-98490097 MsG0180005985.01.T01:CDS 40.0%
TGGAACTTTCTTGTTGCTCT+TGG - Chr1:98492457-98492476 None:intergenic 40.0%
TGTCAGTGTCTTGTATGTGT+CGG - Chr1:98489723-98489742 None:intergenic 40.0%
TTACTGCTACTGCTATGGAT+GGG - Chr1:98495722-98495741 None:intergenic 40.0%
TTTGAGCTCGTCTATAAGCA+CGG - Chr1:98496297-98496316 None:intergenic 40.0%
! AAGTGCTAGCTCTTTGTCTT+TGG + Chr1:98491748-98491767 MsG0180005985.01.T01:CDS 40.0%
! AATACCAACCTCTTTTCTGG+AGG - Chr1:98491294-98491313 None:intergenic 40.0%
! CTAATGAAGGTGTGTCACAT+AGG - Chr1:98493305-98493324 None:intergenic 40.0%
! GTGTCAGTTTTTACCAACAC+TGG + Chr1:98494240-98494259 MsG0180005985.01.T01:CDS 40.0%
! TATGCTTGATAACCGTTGTC+AGG + Chr1:98490802-98490821 MsG0180005985.01.T01:intron 40.0%
! TCCACAATGGGGTACTTATT+AGG - Chr1:98494828-98494847 None:intergenic 40.0%
! TGACACTCCAAACACTCTTT+TGG - Chr1:98494226-98494245 None:intergenic 40.0%
! TGATACGTATCGGGAAGTAT+CGG - Chr1:98493724-98493743 None:intergenic 40.0%
! TGATGAGGTACTTCTTGCAA+TGG + Chr1:98496439-98496458 MsG0180005985.01.T01:CDS 40.0%
! TGGGGTACTTATTAGGTATC+AGG - Chr1:98494821-98494840 None:intergenic 40.0%
! TGTGTTGGTGTATGTGACAT+TGG - Chr1:98489318-98489337 None:intergenic 40.0%
! TTTTGTTAGAGGGTCTCGAT+TGG + Chr1:98495000-98495019 MsG0180005985.01.T01:intron 40.0%
!! ATTGAGGCATTGTGCTTTCA+TGG + Chr1:98490675-98490694 MsG0180005985.01.T01:CDS 40.0%
!! CTTCAAGTTGAAGACATGTC+AGG - Chr1:98489823-98489842 None:intergenic 40.0%
!! TAGATGCTAACTTGCTAGGT+TGG + Chr1:98490253-98490272 MsG0180005985.01.T01:CDS 40.0%
!! TAGCTATTTTCGTTGCAGGT+TGG + Chr1:98489616-98489635 MsG0180005985.01.T01:intron 40.0%
!! TCAAACTTAGTGGAGCATTG+AGG + Chr1:98490659-98490678 MsG0180005985.01.T01:CDS 40.0%
!! TGTTTTCAATCTGAGGTGTC+GGG + Chr1:98489354-98489373 MsG0180005985.01.T01:intron 40.0%
!! TTGGAGACCAAAAGAGTGTT+TGG + Chr1:98494216-98494235 MsG0180005985.01.T01:CDS 40.0%
!!! CTTGCTAGGTTGGTATTTTG+TGG + Chr1:98490263-98490282 MsG0180005985.01.T01:CDS 40.0%
!!! TTTAGTTGGTGGAGCTTTTG+AGG + Chr1:98489578-98489597 MsG0180005985.01.T01:CDS 40.0%
ACACTGCAAAAAGCCTCCAA+AGG - Chr1:98496529-98496548 None:intergenic 45.0%
AGTGCAATCATCAAGCCAAG+AGG + Chr1:98490403-98490422 MsG0180005985.01.T01:intron 45.0%
ATCAAGCCAAGAGGAGACTT+TGG + Chr1:98490412-98490431 MsG0180005985.01.T01:intron 45.0%
ATCTTGTATGGACCATGAGG+TGG - Chr1:98490613-98490632 None:intergenic 45.0%
CAACACCAGGCTAAAGGAAA+TGG + Chr1:98491510-98491529 MsG0180005985.01.T01:CDS 45.0%
CAACATATGTGCTAACAGGG+TGG + Chr1:98494476-98494495 MsG0180005985.01.T01:CDS 45.0%
CAAGCTCTACATTATGAGCC+AGG + Chr1:98494314-98494333 MsG0180005985.01.T01:CDS 45.0%
CAATTTGTGGAGATCCTCTC+CGG - Chr1:98490100-98490119 None:intergenic 45.0%
CACCCTGTTAGCACATATGT+TGG - Chr1:98494478-98494497 None:intergenic 45.0%
CACTCACACATCTAAGTCAG+TGG + Chr1:98494641-98494660 MsG0180005985.01.T01:intron 45.0%
CATCAAATTCTGCTTCCTGG+AGG + Chr1:98494347-98494366 MsG0180005985.01.T01:intron 45.0%
CATCATCACCCGTTCCAAAA+AGG - Chr1:98493506-98493525 None:intergenic 45.0%
CCAAACATGACCTTGAATCC+TGG - Chr1:98494586-98494605 None:intergenic 45.0%
CCAGGATTCAAGGTCATGTT+TGG + Chr1:98494583-98494602 MsG0180005985.01.T01:intron 45.0%
CCCGGATATGAGATACGATA+TGG - Chr1:98494184-98494203 None:intergenic 45.0%
CGCGTTGTCAACATTCGTAA+TGG + Chr1:98489050-98489069 MsG0180005985.01.T01:CDS 45.0%
CTTCTTTGTTGGTGTGTGTG+TGG + Chr1:98495678-98495697 MsG0180005985.01.T01:intron 45.0%
GAAAAATGTCACAGATGGGG+AGG - Chr1:98494700-98494719 None:intergenic 45.0%
GAATTGAGTTCAACCGCAGT+TGG - Chr1:98496331-98496350 None:intergenic 45.0%
GACACCACTTGTGTACCATT+AGG + Chr1:98493193-98493212 MsG0180005985.01.T01:intron 45.0%
GATACTTCCCGATACGTATC+AGG + Chr1:98493723-98493742 MsG0180005985.01.T01:intron 45.0%
GCATTGTGCTTTCATGGTCA+TGG + Chr1:98490681-98490700 MsG0180005985.01.T01:CDS 45.0%
GGAACGTCAGCAACAAGAAT+CGG + Chr1:98488894-98488913 MsG0180005985.01.T01:CDS 45.0%
GGAGTTGCTGCATCTTTAGA+AGG + Chr1:98490138-98490157 MsG0180005985.01.T01:CDS 45.0%
GTAAGACAACACCAGGCTAA+AGG + Chr1:98491504-98491523 MsG0180005985.01.T01:CDS 45.0%
GTATTGTTGTGGGGATTTGC+AGG + Chr1:98489868-98489887 MsG0180005985.01.T01:intron 45.0%
GTCATCGACGAATGAACTAG+TGG + Chr1:98491581-98491600 MsG0180005985.01.T01:intron 45.0%
GTCTGATATCCCAGGATTCA+AGG + Chr1:98494573-98494592 MsG0180005985.01.T01:intron 45.0%
GTCTGTGTAAAACTCGACTC+TGG - Chr1:98491645-98491664 None:intergenic 45.0%
TAAACAACTGCGTTTGGGGA+CGG - Chr1:98489009-98489028 None:intergenic 45.0%
TAAGTTCTTCACGCTCATCG+TGG - Chr1:98491016-98491035 None:intergenic 45.0%
TAATTGGGAAATATCGGGGC+AGG - Chr1:98493779-98493798 None:intergenic 45.0%
TAGCCTTCTCACCAAGATCT+TGG - Chr1:98491835-98491854 None:intergenic 45.0%
TCACCGCAAAAAGAGAGTTG+AGG - Chr1:98491692-98491711 None:intergenic 45.0%
TCGTCTATAAGCACGGCTAT+GGG - Chr1:98496290-98496309 None:intergenic 45.0%
TCTGATGACCCTCTTTATCG+CGG + Chr1:98490368-98490387 MsG0180005985.01.T01:CDS 45.0%
TGACTTCCTTAGTCGTCAGT+AGG - Chr1:98492993-98493012 None:intergenic 45.0%
TGCAAAAAGCCTCCAAAGGT+GGG - Chr1:98496525-98496544 None:intergenic 45.0%
TGCGGTTGAACTCAATTCGT+AGG + Chr1:98496333-98496352 MsG0180005985.01.T01:CDS 45.0%
TGGTGCAGACCCTATAATTG+TGG + Chr1:98491137-98491156 MsG0180005985.01.T01:intron 45.0%
TGTCTTGGAACGTGTAGCAT+AGG + Chr1:98492489-98492508 MsG0180005985.01.T01:intron 45.0%
TGTTCGACTCCACCAACATA+AGG - Chr1:98496487-98496506 None:intergenic 45.0%
TTCATGGTCATGGCAATGCA+TGG + Chr1:98490691-98490710 MsG0180005985.01.T01:CDS 45.0%
TTCTACCACTGGATCCCAAT+TGG - Chr1:98492638-98492657 None:intergenic 45.0%
! GACCCATCTCGTAGAGTTTT+TGG - Chr1:98489091-98489110 None:intergenic 45.0%
! TGAAGGTGTGTCACATAGGA+AGG - Chr1:98493301-98493320 None:intergenic 45.0%
! TGGCCTCAACTCTCTTTTTG+CGG + Chr1:98491686-98491705 MsG0180005985.01.T01:CDS 45.0%
! TTGGTGTGTGTGTGGTGTTA+GGG + Chr1:98495686-98495705 MsG0180005985.01.T01:intron 45.0%
!! AGGAGTGATGGTGCTCTTTT+TGG + Chr1:98493913-98493932 MsG0180005985.01.T01:intron 45.0%
!! GCTAAAGTACTGCGTCAACT+AGG + Chr1:98491348-98491367 MsG0180005985.01.T01:CDS 45.0%
!! GCTTTGGGAACAATTTCAGC+AGG + Chr1:98489522-98489541 MsG0180005985.01.T01:CDS 45.0%
!! GGAGTGATGGTGCTCTTTTT+GGG + Chr1:98493914-98493933 MsG0180005985.01.T01:intron 45.0%
!! GTCGTAGCTATTTTCGTTGC+AGG + Chr1:98489612-98489631 MsG0180005985.01.T01:CDS 45.0%
!! GTTCTTATTGGTGTTGGTGC+TGG + Chr1:98490033-98490052 MsG0180005985.01.T01:CDS 45.0%
!!! AAGTGTTTTGGGAGCTACAG+AGG - Chr1:98490945-98490964 None:intergenic 45.0%
!!! CTTTTCGGTTAGTCTAAGGG+AGG + Chr1:98494287-98494306 MsG0180005985.01.T01:CDS 45.0%
!! AAAAAATAAAATTTAATCTT+TGG - Chr1:98493687-98493706 None:intergenic 5.0%
AGATCCTCTCCGGACCAAAT+AGG - Chr1:98490090-98490109 None:intergenic 50.0%
AGCACGGCTATGGGATAAAG+TGG - Chr1:98496281-98496300 None:intergenic 50.0%
AGTTGGTTACACACGTGCCA+CGG + Chr1:98495572-98495591 MsG0180005985.01.T01:CDS 50.0%
ATGTGCTACGAGCCTATGAC+TGG + Chr1:98494004-98494023 MsG0180005985.01.T01:intron 50.0%
CATAGGCACCTCCAGAAAAG+AGG + Chr1:98491283-98491302 MsG0180005985.01.T01:intron 50.0%
CGGAGAGGATCTCCACAAAT+TGG + Chr1:98490098-98490117 MsG0180005985.01.T01:CDS 50.0%
CTAAAGATGCAGCAACTCCG+TGG - Chr1:98490137-98490156 None:intergenic 50.0%
CTCCAAAAAGCTGTGAAGCC+CGG - Chr1:98494202-98494221 None:intergenic 50.0%
CTCGTCTATAAGCACGGCTA+TGG - Chr1:98496291-98496310 None:intergenic 50.0%
CTCTTCTGATACGTATCGGG+AGG - Chr1:98493661-98493680 None:intergenic 50.0%
CTGCAAAAAGCCTCCAAAGG+TGG - Chr1:98496526-98496545 None:intergenic 50.0%
GATCCTCTCCGGACCAAATA+GGG - Chr1:98490089-98490108 None:intergenic 50.0%
GCGATAAAGAGGGTCATCAG+AGG - Chr1:98490369-98490388 None:intergenic 50.0%
GGAAGCTGTAAGACAACACC+AGG + Chr1:98491497-98491516 MsG0180005985.01.T01:CDS 50.0%
GGAGTGGTTGAGTACCTGTT+AGG + Chr1:98495021-98495040 MsG0180005985.01.T01:intron 50.0%
GTTGGTGTGTGTGTGGTGTT+AGG + Chr1:98495685-98495704 MsG0180005985.01.T01:intron 50.0%
TCTTGCAATGGCCGAAGAGT+TGG + Chr1:98496451-98496470 MsG0180005985.01.T01:CDS 50.0%
TGACTCCAATTGGGATCCAG+TGG + Chr1:98492630-98492649 MsG0180005985.01.T01:intron 50.0%
TTACCCTATTTGGTCCGGAG+AGG + Chr1:98490083-98490102 MsG0180005985.01.T01:CDS 50.0%
TTAGAGGGTCTCGATTGGAG+TGG + Chr1:98495005-98495024 MsG0180005985.01.T01:intron 50.0%
TTTACTTTCACCGTTGCCCG+TGG - Chr1:98495592-98495611 None:intergenic 50.0%
! ATCCGGGCTTCACAGCTTTT+TGG + Chr1:98494197-98494216 MsG0180005985.01.T01:CDS 50.0%
! GCTTGATAACCGTTGTCAGG+AGG + Chr1:98490805-98490824 MsG0180005985.01.T01:intron 50.0%
! GGAGGCTTTTTGCAGTGTTG+AGG + Chr1:98496531-98496550 MsG0180005985.01.T01:CDS 50.0%
! GTGTTGGTGTCTGGAAGAGA+TGG + Chr1:98489976-98489995 MsG0180005985.01.T01:CDS 50.0%
! TACTGCACCGATACGCGATA+CGG - Chr1:98494155-98494174 None:intergenic 50.0%
! TAGTGTGTTGCTCCCACCTT+TGG + Chr1:98496510-98496529 MsG0180005985.01.T01:CDS 50.0%
!! CAGCAGGAGTGCTTGCTATA+GGG + Chr1:98489538-98489557 MsG0180005985.01.T01:CDS 50.0%
!! TCAGCAGGAGTGCTTGCTAT+AGG + Chr1:98489537-98489556 MsG0180005985.01.T01:CDS 50.0%
CATTGCACGTGCTCTTGGAG+AGG + Chr1:98496364-98496383 MsG0180005985.01.T01:CDS 55.0%
GGCACCTCCAGAAAAGAGGT+TGG + Chr1:98491287-98491306 MsG0180005985.01.T01:intron 55.0%
GTTGGTTACACACGTGCCAC+GGG + Chr1:98495573-98495592 MsG0180005985.01.T01:CDS 55.0%
TATCGGTGCAGGATACGCAG+GGG - Chr1:98493627-98493646 None:intergenic 55.0%
TCCACCATTGCACGTGCTCT+TGG + Chr1:98496359-98496378 MsG0180005985.01.T01:CDS 55.0%
TGCTTCCTGGAGGCAATCAG+AGG + Chr1:98494357-98494376 MsG0180005985.01.T01:intron 55.0%
TTCAGCCTCTGATTGCCTCC+AGG - Chr1:98494365-98494384 None:intergenic 55.0%
! AAGGAAGCATGGCCCTATCG+AGG + Chr1:98492670-98492689 MsG0180005985.01.T01:intron 55.0%
! CTCTCCAAGAGCACGTGCAA+TGG - Chr1:98496366-98496385 None:intergenic 55.0%
! GTATCGGTGCAGGATACGCA+GGG - Chr1:98493628-98493647 None:intergenic 55.0%
! TCCAAGAGCACGTGCAATGG+TGG - Chr1:98496363-98496382 None:intergenic 55.0%
! TGTGTTGCTCCCACCTTTGG+AGG + Chr1:98496513-98496532 MsG0180005985.01.T01:CDS 55.0%
!! CTTCAGAAGGTGGGTGCTGA+AGG + Chr1:98491324-98491343 MsG0180005985.01.T01:CDS 55.0%
!! GGGAGGTATCGAGCAGGTAT+CGG - Chr1:98493644-98493663 None:intergenic 55.0%
!! TATCGAGCAGGTATCGGTGC+AGG - Chr1:98493638-98493657 None:intergenic 55.0%
AGATGGGGAGGCCTTGGTTG+AGG - Chr1:98494688-98494707 None:intergenic 60.0%
GCATTGTGGGAGCCACCTCA+TGG + Chr1:98490598-98490617 MsG0180005985.01.T01:CDS 60.0%
TACACACGTGCCACGGGCAA+CGG + Chr1:98495579-98495598 MsG0180005985.01.T01:CDS 60.0%
TGGAGAGGAGCGAACCCGTA+AGG + Chr1:98496379-98496398 MsG0180005985.01.T01:CDS 60.0%
TGTCACAGATGGGGAGGCCT+TGG - Chr1:98494694-98494713 None:intergenic 60.0%
!! CGTATCGGGAGGTATCGAGC+AGG - Chr1:98493650-98493669 None:intergenic 60.0%
!! GGTATCGGTGCAGGATACGC+AGG - Chr1:98493629-98493648 None:intergenic 60.0%
GAAAGACGCACGCGCGCGCA+TGG - Chr1:98495948-98495967 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 98488882 98496565 98488882 ID=MsG0180005985.01;Name=MsG0180005985.01
Chr1 mRNA 98488882 98496565 98488882 ID=MsG0180005985.01.T01;Parent=MsG0180005985.01;Name=MsG0180005985.01.T01;_AED=0.31;_eAED=0.33;_QI=0|0.52|0.54|0.90|0.71|0.68|22|0|742
Chr1 exon 98488882 98489232 98488882 ID=MsG0180005985.01.T01:exon:16476;Parent=MsG0180005985.01.T01
Chr1 exon 98489495 98489633 98489495 ID=MsG0180005985.01.T01:exon:16477;Parent=MsG0180005985.01.T01
Chr1 exon 98489890 98490159 98489890 ID=MsG0180005985.01.T01:exon:16478;Parent=MsG0180005985.01.T01
Chr1 exon 98490244 98490389 98490244 ID=MsG0180005985.01.T01:exon:16479;Parent=MsG0180005985.01.T01
Chr1 exon 98490589 98490735 98490589 ID=MsG0180005985.01.T01:exon:16480;Parent=MsG0180005985.01.T01
Chr1 exon 98491288 98491558 98491288 ID=MsG0180005985.01.T01:exon:16481;Parent=MsG0180005985.01.T01
Chr1 exon 98491663 98491888 98491663 ID=MsG0180005985.01.T01:exon:16482;Parent=MsG0180005985.01.T01
Chr1 exon 98494173 98494335 98494173 ID=MsG0180005985.01.T01:exon:16483;Parent=MsG0180005985.01.T01
Chr1 exon 98494423 98494518 98494423 ID=MsG0180005985.01.T01:exon:16484;Parent=MsG0180005985.01.T01
Chr1 exon 98495510 98495600 98495510 ID=MsG0180005985.01.T01:exon:16485;Parent=MsG0180005985.01.T01
Chr1 exon 98496237 98496565 98496237 ID=MsG0180005985.01.T01:exon:16486;Parent=MsG0180005985.01.T01
Chr1 CDS 98488882 98489232 98488882 ID=MsG0180005985.01.T01:cds;Parent=MsG0180005985.01.T01
Chr1 CDS 98489495 98489633 98489495 ID=MsG0180005985.01.T01:cds;Parent=MsG0180005985.01.T01
Chr1 CDS 98489890 98490159 98489890 ID=MsG0180005985.01.T01:cds;Parent=MsG0180005985.01.T01
Chr1 CDS 98490244 98490389 98490244 ID=MsG0180005985.01.T01:cds;Parent=MsG0180005985.01.T01
Chr1 CDS 98490589 98490735 98490589 ID=MsG0180005985.01.T01:cds;Parent=MsG0180005985.01.T01
Chr1 CDS 98491288 98491558 98491288 ID=MsG0180005985.01.T01:cds;Parent=MsG0180005985.01.T01
Chr1 CDS 98491663 98491888 98491663 ID=MsG0180005985.01.T01:cds;Parent=MsG0180005985.01.T01
Chr1 CDS 98494173 98494335 98494173 ID=MsG0180005985.01.T01:cds;Parent=MsG0180005985.01.T01
Chr1 CDS 98494423 98494518 98494423 ID=MsG0180005985.01.T01:cds;Parent=MsG0180005985.01.T01
Chr1 CDS 98495510 98495600 98495510 ID=MsG0180005985.01.T01:cds;Parent=MsG0180005985.01.T01
Chr1 CDS 98496237 98496565 98496237 ID=MsG0180005985.01.T01:cds;Parent=MsG0180005985.01.T01
Gene Sequence

>MsG0180005985.01.T01

ATGCAATCACATGGAACGTCAGCAACAAGAATCGGTTCCTTCAGACACAGTATCTTAGAAAGGAGCAGAGAGAGACTCCTTGCTAAAAAAGAATACACTGATGATGATTTCAACTTTAACGATACCGTCCCCAAACGCAGTTGTTTAGATCTTGACGCTCTTTCTCAACGCGTTGTCAACATTCGTAATGGCTCTCGTGATTTCATCCAAAAACTCTACGAGATGGGTCGTTCTGATCGACGTAAAGTTATTTTTGCCATGAAAGCTGGTTTAACTTTGGCTCTTGTTTCTCTTTTCATTTACATTAAGGAAAAACAACTTAGCAAATACTCTATTTGGGCTATTCTCACTGTGCAACCCTTAACAAGGTTCAATCGTGCTTTGGGAACAATTTCAGCAGGAGTGCTTGCTATAGGGATTGCACGATTATCAGTTTTAGTTGGTGGAGCTTTTGAGGAGCTTCTTATTGTCGTAGCTATTTTCGTTGCAGGGTTTTGTGCAAGTTTTATGAAGCTATATCCTGCAATGAAGACTTATGAATACGGCTTTCGTGTGTTTTTGTTAACCTTTTGTATTGTGTTGGTGTCTGGAAGAGATGGAAAGCAGTTTTTCACCACTGCTTTTTATAGATTGGTTCTTATTGGTGTTGGTGCTGGTTTGAGTTTGTCTGTTAATATTTGCATTTACCCTATTTGGTCCGGAGAGGATCTCCACAAATTGGTCGTCAAAAATTTCCACGGAGTTGCTGCATCTTTAGAAGTTTGTTCTATAGATGCTAACTTGCTAGGTTGGTATTTTGTGGTAATTTTCTTAGGTTGTGTAAATGGTTACCTACAATGTGTTGAATATGAGAGGGTGCCATCCAAATTCTCGTATATCAAGCCTCTGATGACCCTCTTTATCGCGTTAGATTTTGCATTGTGGGAGCCACCTCATGGTCCATACAAGATGTTCAATTATCCTTGGAGAAGCTATGTCAAACTTAGTGGAGCATTGAGGCATTGTGCTTTCATGGTCATGGCAATGCATGGATGCATACTTTCAGAAATACAGGCACCTCCAGAAAAGAGGTTGGTATTCTTTCAAGAACTTCAGAAGGTGGGTGCTGAAGGAGCTAAAGTACTGCGTCAACTAGGAAGCAAAGTAGAAAAGATGGAGAAGCTAAGCCCACGTGACATTCTGTTAGAAGTTCACGAGGCAGCCGAGCTATTGCAGATGAAGATTGACAGTCATTCATTCCTTCTAGTCAATTCAGAGAACTGGGAAGCTGTAAGACAACACCAGGCTAAAGGAAATGGACAATCTGACAATTTGATCGATGAGAACCATGAACAAGGCTTAGTATCATGGCCTCAACTCTCTTTTTGCGGTGATGCTATACTGAATGAGCCGGAATCTAAAGTTTATGAAAGTGCTAGCTCTTTGTCTTTGGCTACATTTGCTTCACTTTTAATCGAGTTTGTTGCAAGACTTCAAAATCTTGTGGATGAATTCCAAGATCTTGGTGAGAAGGCTAATTTTAAAGATCCCTTTGATGAACCTATATTGAATATCGTATCCATATCGTATCTCATATCCGGGCTTCACAGCTTTTTGGAGACCAAAAGAGTGTTTGGAGTGTCAGTTTTTACCAACACTGGACTTTCCCTTTTTTTGCCTCTAAGCTTTTCGGTTAGTCTAAGGGAGGTTAGCAAGCTCTACATTATGAGCCAGAATTTGGACACTTCTAAGGCTAACTTCAGAATGTATGTTAGTGGTATGCTTTCCAACATATGTGCTAACAGGGTGGTTGTCACTTGTCCAAGACATGAACGGTTTTTTATTATAGAATTTGAAAAGCAATTAATCGAAGAAGAGAGGAAAGGAAACAAAGTTGGTTACACACGTGCCACGGGCAACGAACTACTGGGAGAACTAAACAATATGTCTATGGCGGACGAACCACTTTATCCCATAGCCGTGCTTATAGACGAGCTCAAAAATGATGATATCCAACTGCGGTTGAACTCAATTCGTAGGCTATCCACCATTGCACGTGCTCTTGGAGAGGAGCGAACCCGTAAGGAATTAATTCCATTTTTAACTGAGAATAATGACGACGATGATGAGGTACTTCTTGCAATGGCCGAAGAGTTGGAGTTTTCATTCCTTATGTTGGTGGAGTCGAACATGCTAGTGTGTTGCTCCCACCTTTGGAGGCTTTTTGCAGTGTTGAGGAAACCTGCGTGA

Protein sequence

>MsG0180005985.01.T01

MQSHGTSATRIGSFRHSILERSRERLLAKKEYTDDDFNFNDTVPKRSCLDLDALSQRVVNIRNGSRDFIQKLYEMGRSDRRKVIFAMKAGLTLALVSLFIYIKEKQLSKYSIWAILTVQPLTRFNRALGTISAGVLAIGIARLSVLVGGAFEELLIVVAIFVAGFCASFMKLYPAMKTYEYGFRVFLLTFCIVLVSGRDGKQFFTTAFYRLVLIGVGAGLSLSVNICIYPIWSGEDLHKLVVKNFHGVAASLEVCSIDANLLGWYFVVIFLGCVNGYLQCVEYERVPSKFSYIKPLMTLFIALDFALWEPPHGPYKMFNYPWRSYVKLSGALRHCAFMVMAMHGCILSEIQAPPEKRLVFFQELQKVGAEGAKVLRQLGSKVEKMEKLSPRDILLEVHEAAELLQMKIDSHSFLLVNSENWEAVRQHQAKGNGQSDNLIDENHEQGLVSWPQLSFCGDAILNEPESKVYESASSLSLATFASLLIEFVARLQNLVDEFQDLGEKANFKDPFDEPILNIVSISYLISGLHSFLETKRVFGVSVFTNTGLSLFLPLSFSVSLREVSKLYIMSQNLDTSKANFRMYVSGMLSNICANRVVVTCPRHERFFIIEFEKQLIEEERKGNKVGYTRATGNELLGELNNMSMADEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLTENNDDDDEVLLAMAEELEFSFLMLVESNMLVCCSHLWRLFAVLRKPA*