AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042433.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042433.01.T01 MTR_8g018730 98.611 864 12 0 1 864 1 864 0.0 1758
MsG0880042433.01.T01 MTR_8g018730 95.023 864 13 1 1 864 1 834 0.0 1681
MsG0880042433.01.T01 MTR_8g018735 90.983 865 77 1 1 864 1 865 0.0 1617
MsG0880042433.01.T01 MTR_5g024020 83.968 867 136 2 1 864 1 867 0.0 1532
MsG0880042433.01.T01 MTR_5g024020 80.969 867 126 3 1 864 1 831 0.0 1461
MsG0880042433.01.T01 MTR_2g099560 73.472 867 215 6 3 864 7 863 0.0 1316
MsG0880042433.01.T01 MTR_2g099570 71.296 864 237 3 3 864 7 861 0.0 1290
MsG0880042433.01.T01 MTR_8g018420 69.697 858 247 5 10 864 9 856 0.0 1261
MsG0880042433.01.T01 MTR_3g081130 67.396 868 269 7 1 864 1 858 0.0 1196
MsG0880042433.01.T01 MTR_8g018730 98.801 584 7 0 281 864 1 584 0.0 1192
MsG0880042433.01.T01 MTR_8g018570 64.401 868 299 8 3 864 7 870 0.0 1177
MsG0880042433.01.T01 MTR_8g018550 65.783 868 285 7 3 864 7 868 0.0 1177
MsG0880042433.01.T01 MTR_8g018430 62.587 866 308 6 5 864 6 861 0.0 1155
MsG0880042433.01.T01 MTR_8g018510 63.815 865 306 6 4 864 8 869 0.0 1155
MsG0880042433.01.T01 MTR_8g020990 63.006 865 314 5 3 864 7 868 0.0 1153
MsG0880042433.01.T01 MTR_8g018690 63.552 867 307 4 1 864 5 865 0.0 1149
MsG0880042433.01.T01 MTR_8g018520 62.890 865 313 6 4 864 8 868 0.0 1140
MsG0880042433.01.T01 MTR_8g018735 90.569 615 57 1 1 614 1 615 0.0 1137
MsG0880042433.01.T01 MTR_3g081130 68.314 789 242 5 80 864 2 786 0.0 1122
MsG0880042433.01.T01 MTR_8g018690 62.053 867 300 5 1 864 5 845 0.0 1108
MsG0880042433.01.T01 MTR_8g018450 58.228 869 308 10 5 864 6 828 0.0 1033
MsG0880042433.01.T01 MTR_1g083020 57.949 868 327 8 9 864 17 858 0.0 1011
MsG0880042433.01.T01 MTR_7g113410 55.932 885 344 11 1 864 8 867 0.0 993
MsG0880042433.01.T01 MTR_1g104650 56.357 873 337 10 11 864 9 856 0.0 992
MsG0880042433.01.T01 MTR_8g018650 55.349 860 318 12 10 864 9 807 0.0 938
MsG0880042433.01.T01 MTR_8g018620 55.220 862 316 14 10 864 9 807 0.0 929
MsG0880042433.01.T01 MTR_8g018590 54.202 821 325 13 63 864 35 823 0.0 873
MsG0880042433.01.T01 MTR_8g020970 47.080 822 414 11 55 863 113 926 0.0 745
MsG0880042433.01.T01 MTR_8g080230 44.311 835 435 15 49 864 93 916 0.0 687
MsG0880042433.01.T01 MTR_4g066170 43.135 874 463 18 6 864 52 906 0.0 672
MsG0880042433.01.T01 MTR_3g479460 42.515 835 444 14 45 864 90 903 0.0 667
MsG0880042433.01.T01 MTR_3g079450 40.980 837 454 14 45 864 89 902 0.0 642
MsG0880042433.01.T01 MTR_4g088810 40.114 875 469 16 7 863 57 894 0.0 634
MsG0880042433.01.T01 MTR_8g011340 42.360 805 417 18 54 829 46 832 0.0 634
MsG0880042433.01.T01 MTR_3g079420 41.417 833 463 13 45 864 45 865 0.0 609
MsG0880042433.01.T01 MTR_8g021020 63.614 404 142 2 466 864 28 431 0.0 545
MsG0880042433.01.T01 MTR_8g020970 46.154 572 288 10 55 614 113 676 3.24e-160 483
MsG0880042433.01.T01 MTR_6g452500 41.235 599 316 14 263 845 25 603 1.09e-147 449
MsG0880042433.01.T01 MTR_3g079450 39.658 585 315 13 45 614 89 650 3.44e-133 412
MsG0880042433.01.T01 MTR_7g012030 59.829 117 46 1 519 634 87 203 2.87e-40 148
MsG0880042433.01.T01 MTR_8g463810 34.413 247 89 5 406 650 182 357 6.60e-35 138
MsG0880042433.01.T01 MTR_6g046330 53.906 128 47 2 519 634 77 204 6.61e-35 135
MsG0880042433.01.T01 MTR_3g107560 35.683 227 83 8 642 864 7 174 8.38e-29 114
MsG0880042433.01.T01 MTR_5g023990 64.706 68 11 1 650 717 145 199 2.27e-20 93.2
MsG0880042433.01.T01 MTR_7g113408 50.000 62 31 0 757 818 8 69 6.02e-15 71.6
MsG0880042433.01.T01 MTR_2g005920 50.909 55 27 0 738 792 58 112 1.68e-14 71.2
MsG0880042433.01.T01 MTR_4g088805 40.659 91 53 1 774 863 1 91 4.58e-14 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042433.01.T01 AT1G55020 56.667 870 334 10 9 864 19 859 0.0 1000
MsG0880042433.01.T01 AT3G22400 53.303 878 362 11 10 864 34 886 0.0 958
MsG0880042433.01.T01 AT1G72520 45.985 822 423 11 55 864 114 926 0.0 726
MsG0880042433.01.T01 AT1G17420 46.135 815 417 12 62 864 115 919 0.0 723
MsG0880042433.01.T01 AT3G45140 44.080 853 435 19 28 864 70 896 0.0 675
MsG0880042433.01.T01 AT3G45140 46.405 765 380 15 116 864 4 754 0.0 661
MsG0880042433.01.T01 AT1G67560 44.350 823 422 15 62 864 111 917 0.0 652

Find 229 sgRNAs with CRISPR-Local

Find 419 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGAATATGATGCTAATTT+TGG 0.100125 8:-8622832 MsG0880042433.01.T01:CDS
TACAACATCACTGCTGTATT+TGG 0.113928 8:-8619343 MsG0880042433.01.T01:three_prime_UTR
TGATGCATTCATGCCATATT+TGG 0.131415 8:-8621216 MsG0880042433.01.T01:CDS
AATCATCACATTGATGTTAT+TGG 0.174734 8:+8619410 None:intergenic
TCTTCTCTAAAGTGATTTAA+TGG 0.196129 8:+8622472 None:intergenic
CTTCTGCAGTTTACAAGAAT+TGG 0.212735 8:-8620592 MsG0880042433.01.T01:CDS
GGGAATAAAAGCTTATAAAT+TGG 0.214154 8:+8620725 None:intergenic
GTTCCAAGAGATGAAAATTT+TGG 0.231662 8:-8622134 MsG0880042433.01.T01:CDS
AAATTTATCCTCTCCAAATA+TGG 0.251076 8:+8621203 None:intergenic
AATCTTGCTCCATTATTATA+TGG 0.253046 8:-8619944 MsG0880042433.01.T01:CDS
CCGTTGACGGACTAGAAATA+TGG 0.275193 8:-8620142 MsG0880042433.01.T01:CDS
TGGAATACTGATGAAGAATT+TGG 0.277138 8:-8621626 MsG0880042433.01.T01:CDS
TCTTGAACAGTTTGCATCTT+AGG 0.280001 8:+8619975 None:intergenic
GAAGAAATCTCAATGGAATT+TGG 0.280136 8:+8620611 None:intergenic
CTAGTTTGCTTCCAAACTTT+TGG 0.283941 8:+8619628 None:intergenic
GAGAGAATAATAACAAGTTT+TGG 0.287246 8:-8619680 MsG0880042433.01.T01:CDS
AGAAATATGGGATGCTATTA+AGG 0.290191 8:-8620129 MsG0880042433.01.T01:CDS
TACTAATTGTTGGACGGTTC+AGG 0.290734 8:+8619862 None:intergenic
TTTGTGGAACAGGCACTTAA+TGG 0.292803 8:-8621266 MsG0880042433.01.T01:intron
ATTTATTGTGTCACGGTAAT+GGG 0.293937 8:+8620703 None:intergenic
GGGCTGGCAAGGGGCTGATT+TGG 0.296037 8:+8621934 None:intergenic
GACTCCTCCGATCAAATTTC+CGG 0.296832 8:+8625057 None:intergenic
ACATTAGATGCCACTGTCTA+TGG 0.313484 8:-8621438 MsG0880042433.01.T01:CDS
CTTTGCTTTCAGCACCATAT+TGG 0.318853 8:+8621078 None:intergenic
CAGCCCCTTGCCAGCCCTTA+AGG 0.319271 8:-8621928 MsG0880042433.01.T01:CDS
CGAAGCTATCGAACTCATTC+GGG 0.329624 8:+8622012 None:intergenic
GTTCAAGCCTTCCAAAAGTT+TGG 0.333897 8:-8619639 MsG0880042433.01.T01:CDS
GATACTGCCACTGCCTTCTT+AGG 0.334563 8:-8625010 MsG0880042433.01.T01:CDS
ATAACATCAATGTGATGATT+AGG 0.336707 8:-8619407 MsG0880042433.01.T01:three_prime_UTR
TTCACCATCTCATCGTATTC+CGG 0.336776 8:+8619813 None:intergenic
TCATCGTATTCCGGAGTTCC+TGG 0.337127 8:+8619822 None:intergenic
CTTGAGGTGGTGGAAACTTA+AGG 0.348578 8:+8621877 None:intergenic
CTCATCTGTTGGGTAGTATA+AGG 0.350348 8:+8620085 None:intergenic
AAACTTAATTCGATGGCTAA+TGG 0.354943 8:+8621119 None:intergenic
CACTCAAATGGGGTCCAATA+TGG 0.361963 8:-8621092 MsG0880042433.01.T01:CDS
AACTTCGGACAATATCCTTA+TGG 0.364413 8:-8619894 MsG0880042433.01.T01:CDS
CGGTGCGGAGGATTTCCTTA+AGG 0.370288 8:+8621913 None:intergenic
ACACCCGGTTTCTCACTCTT+AGG 0.374698 8:+8622164 None:intergenic
GGTGCGGAGGATTTCCTTAA+GGG 0.375826 8:+8621914 None:intergenic
CCACCACCTCAAGTAATTAG+AGG 0.377836 8:-8621867 MsG0880042433.01.T01:intron
TCTACCACAGTTACCAACTT+TGG 0.386958 8:-8622884 MsG0880042433.01.T01:CDS
TATTTATTGTGTCACGGTAA+TGG 0.387187 8:+8620702 None:intergenic
TTGAGGTGGTGGAAACTTAA+GGG 0.387785 8:+8621878 None:intergenic
GGAATAAAAGCTTATAAATT+GGG 0.391404 8:+8620726 None:intergenic
TGAAGAAGACGAATCACATT+AGG 0.393551 8:+8621578 None:intergenic
ATTTGTACTGCCTCATCTGT+TGG 0.395789 8:+8620074 None:intergenic
AAATTCATAGCTTACATCAT+TGG 0.395891 8:+8622651 None:intergenic
CTACCACAGTTACCAACTTT+GGG 0.399809 8:-8622883 MsG0880042433.01.T01:CDS
TAAGTTTGCCACACTCAAAT+GGG 0.403015 8:-8621103 MsG0880042433.01.T01:CDS
GCCCTTGTTCGTCCAATCCT+TGG 0.403862 8:-8622343 MsG0880042433.01.T01:CDS
TCTAGTCCGTCAACGGCATA+AGG 0.404548 8:+8620149 None:intergenic
TCAACAAGGGTTTGGTACTT+TGG 0.409673 8:+8619756 None:intergenic
TTCAATTTGATTGTAACTCA+TGG 0.409858 8:-8622717 MsG0880042433.01.T01:CDS
ATAAATCTTCTACTAATTGT+TGG 0.413529 8:+8619852 None:intergenic
TTCTGCAGTTTACAAGAATT+GGG 0.413547 8:-8620591 MsG0880042433.01.T01:CDS
ATCTTGTTCTTGCAAGATGA+TGG 0.413720 8:-8621152 MsG0880042433.01.T01:CDS
TTTGTACTGCCTCATCTGTT+GGG 0.415065 8:+8620075 None:intergenic
GCCTTTACCGATGGACGTTA+TGG 0.415758 8:+8625096 None:intergenic
TCGAAGCTATCGAACTCATT+CGG 0.424592 8:+8622011 None:intergenic
CTATTTGTTGCTATGATGAA+TGG 0.428310 8:+8620767 None:intergenic
ACAACATCACTGCTGTATTT+GGG 0.428770 8:-8619342 MsG0880042433.01.T01:three_prime_UTR
CTCCTTCGTTCGAGTGAAGA+AGG 0.429415 8:-8619519 MsG0880042433.01.T01:CDS
ACAAGGGCGTCGCCACGATC+TGG 0.433037 8:+8622358 None:intergenic
AGATCCTAAGAGTGAGAAAC+CGG 0.434252 8:-8622168 MsG0880042433.01.T01:CDS
TAACCCTGCGCGGGTAGGGA+TGG 0.434485 8:+8622308 None:intergenic
TTAAGTTTGCCACACTCAAA+TGG 0.434747 8:-8621104 MsG0880042433.01.T01:CDS
TCATCAGACTTCCTTATGTA+TGG 0.435382 8:-8622101 MsG0880042433.01.T01:CDS
CACGGTTAGGAATATCTTCA+AGG 0.435842 8:+8622746 None:intergenic
ACTAGATTCATTGTTCCTCT+TGG 0.437516 8:+8619584 None:intergenic
ATGACTTTATTCCATACATA+AGG 0.441922 8:+8622090 None:intergenic
AATTGAACACTTCCACGGTT+AGG 0.444733 8:+8622733 None:intergenic
AACCCTGCGCGGGTAGGGAT+GGG 0.445806 8:+8622309 None:intergenic
TTTCTTATGTAAAATGCTCC+AGG 0.445840 8:+8622805 None:intergenic
TACATGGTGCAAAGCAATAG+TGG 0.452805 8:+8619283 None:intergenic
TTCTAAATAGAGATACTGTT+GGG 0.454464 8:+8619477 None:intergenic
CGAAGGCCATGAGGGGAAGA+TGG 0.454773 8:+8620191 None:intergenic
CTAAAGTGATTTAATGGAGC+TGG 0.455417 8:+8622478 None:intergenic
AGAAGCTGTCCATATAATAA+TGG 0.456653 8:+8619935 None:intergenic
AGCAAACTAGCTGAAATTGA+AGG 0.459113 8:-8619615 MsG0880042433.01.T01:CDS
ATTTGGCTAATTATATCTGT+TGG 0.462480 8:+8621951 None:intergenic
TCAACTGCATAGAGACATTA+CGG 0.464666 8:+8624987 None:intergenic
GGAGGAGTCACCAGCATTGT+TGG 0.465982 8:-8625043 MsG0880042433.01.T01:CDS
AAGGTGTCGAAAGTACAATT+TGG 0.471544 8:-8621037 MsG0880042433.01.T01:CDS
AATTAGTAGAAGATTTATTC+CGG 0.472215 8:-8619847 MsG0880042433.01.T01:CDS
CAGAAAGATCAACAAGGGTT+TGG 0.472356 8:+8619748 None:intergenic
GTGGAAGGAAGCTGTAGAAA+AGG 0.472990 8:-8620030 MsG0880042433.01.T01:CDS
GATTTCCTTAAGGGCTGGCA+AGG 0.476480 8:+8621923 None:intergenic
TCTTGTCTTGCTCCCAAAGT+TGG 0.477942 8:+8622871 None:intergenic
GGTAGAAAACCAACTAGAAA+AGG 0.479857 8:-8622280 MsG0880042433.01.T01:intron
TTTGGAAGAGAGATGCTTGC+TGG 0.480541 8:-8621608 MsG0880042433.01.T01:CDS
CTTTCGACACCTTCGTGTGC+AGG 0.481903 8:+8621047 None:intergenic
GAACACTTAGAGACTAATCT+TGG 0.485357 8:-8621390 MsG0880042433.01.T01:CDS
CGAAAGTACAATTTGGATGT+TGG 0.485918 8:-8621030 MsG0880042433.01.T01:CDS
TAGACACTGAAATTCAGAAA+TGG 0.486341 8:-8620052 MsG0880042433.01.T01:CDS
AATCTAAGAGGAGATGGAAC+TGG 0.486945 8:-8622439 MsG0880042433.01.T01:CDS
TTGCAGAATCTAAGAGGAGA+TGG 0.488557 8:-8622445 MsG0880042433.01.T01:CDS
AACTGGAGAACGCAAAGAAT+GGG 0.488937 8:-8622422 MsG0880042433.01.T01:CDS
GGCGGTGTCCTCGACGCTGC+CGG 0.489241 8:-8625076 MsG0880042433.01.T01:CDS
GAACTGGAGAACGCAAAGAA+TGG 0.490615 8:-8622423 MsG0880042433.01.T01:CDS
ATCTCAATGGAATTTGGTCC+CGG 0.490702 8:+8620617 None:intergenic
TATGATGTTTATAATGATCT+CGG 0.490765 8:-8622385 MsG0880042433.01.T01:CDS
CGGAGGATTTCCTTAAGGGC+TGG 0.493473 8:+8621918 None:intergenic
GTTGAGTAGAGAAAGAAGCT+TGG 0.493562 8:+8625248 None:intergenic
TGGCCTTCGTCTTGTGATAG+AGG 0.494640 8:-8620177 MsG0880042433.01.T01:CDS
CGTGACACAATAAATATCAA+TGG 0.495773 8:-8620695 MsG0880042433.01.T01:CDS
GCGTCCGATGAAGTGTATCT+TGG 0.497267 8:-8619702 MsG0880042433.01.T01:CDS
AGAAGATTTATTCCGGAGCC+AGG 0.498580 8:-8619840 MsG0880042433.01.T01:CDS
CGTTGACGGACTAGAAATAT+GGG 0.503613 8:-8620141 MsG0880042433.01.T01:CDS
TTTCTAAATAGAGATACTGT+TGG 0.503804 8:+8619476 None:intergenic
GAAGAGTTGCAGAATCTAAG+AGG 0.504427 8:-8622451 MsG0880042433.01.T01:CDS
GAGGATCCATCTTCCCCTCA+TGG 0.504857 8:-8620197 MsG0880042433.01.T01:CDS
TCAATTTGATTGTAACTCAT+GGG 0.505064 8:-8622716 MsG0880042433.01.T01:CDS
TACCTCTTGATAAGATCAGC+TGG 0.505206 8:+8620548 None:intergenic
AAAGAGTTAGCAAACATGTT+GGG 0.505875 8:-8625190 MsG0880042433.01.T01:exon
GCACCCATCCCTACCCGCGC+AGG 0.508969 8:-8622312 MsG0880042433.01.T01:CDS
CTTCTAACCCTGCGCGGGTA+GGG 0.513092 8:+8622304 None:intergenic
ATCATCAACTCATGAGCCAT+TGG 0.514587 8:-8620974 MsG0880042433.01.T01:intron
GATGGTGAAAAGTCCTCAAA+AGG 0.515594 8:-8619799 MsG0880042433.01.T01:CDS
TTCAGGATATATCCTCCATA+AGG 0.516837 8:+8619879 None:intergenic
TGTAGCAAGTGGAAAGGGAC+TGG 0.517168 8:-8622935 MsG0880042433.01.T01:intron
GCCATAACGTCCATCGGTAA+AGG 0.517311 8:-8625097 MsG0880042433.01.T01:CDS
AAAGTGTAGGGCAATTGCAC+TGG 0.518841 8:+8619543 None:intergenic
GACTACCCTTATGCCGTTGA+CGG 0.520190 8:-8620155 MsG0880042433.01.T01:CDS
CTTGTTCGTCCAATCCTTGG+AGG 0.520793 8:-8622340 MsG0880042433.01.T01:CDS
CTAGTCCGTCAACGGCATAA+GGG 0.522559 8:+8620150 None:intergenic
GTGCTAGATCCTCCAAGGAT+TGG 0.523237 8:+8622331 None:intergenic
GTAGGGCAATTGCACTGGTC+CGG 0.524708 8:+8619548 None:intergenic
ATTTCCTTAAGGGCTGGCAA+GGG 0.524741 8:+8621924 None:intergenic
AACAACTCCACCAACAATGC+TGG 0.526326 8:+8625033 None:intergenic
ATCTTCTACTAATTGTTGGA+CGG 0.527713 8:+8619856 None:intergenic
GATGCAAACTGTTCAAGACT+TGG 0.529793 8:-8619970 MsG0880042433.01.T01:CDS
AATCAAATTGAACACTTCCA+CGG 0.532254 8:+8622728 None:intergenic
CCTCTAATTACTTGAGGTGG+TGG 0.533059 8:+8621867 None:intergenic
GAAGAAGGTTTAACATTCAG+AGG 0.534950 8:-8619504 MsG0880042433.01.T01:CDS
CTCCAAGGATTGGACGAACA+AGG 0.536054 8:+8622341 None:intergenic
CATTGATATTTATTGTGTCA+CGG 0.537197 8:+8620696 None:intergenic
TACAATTTGGATGTTGGCAA+AGG 0.537477 8:-8621024 MsG0880042433.01.T01:CDS
AACTGCAGAAGAAATCTCAA+TGG 0.538818 8:+8620604 None:intergenic
TCTTGTTCTTGCAAGATGAT+GGG 0.539913 8:-8621151 MsG0880042433.01.T01:CDS
AGTATAAGGATACATAGTCT+TGG 0.540828 8:+8620099 None:intergenic
GTGCAAAAGCTTACGCTACA+AGG 0.541604 8:-8621178 MsG0880042433.01.T01:CDS
ATGTTGGGCATCTTTGACAA+GGG 0.541871 8:-8625175 MsG0880042433.01.T01:CDS
AACCTTCTTCACTCGAACGA+AGG 0.544693 8:+8619517 None:intergenic
TATTCCGGAGCCAGGAACTC+CGG 0.546745 8:-8619832 MsG0880042433.01.T01:CDS
AGAGACATTACGGCCTAAGA+AGG 0.547564 8:+8624997 None:intergenic
ATGCATCATGGTAATCTAAG+AGG 0.548431 8:+8621231 None:intergenic
TTCTTATGTAAAATGCTCCA+GGG 0.549723 8:+8622806 None:intergenic
GAACGAAGGAGCAAAGTGTA+GGG 0.553812 8:+8619531 None:intergenic
AATGGAGCTGGTGTTTGACT+TGG 0.553916 8:+8622490 None:intergenic
GCAAGTGGAAAGGGACTGGT+TGG 0.555695 8:-8622931 MsG0880042433.01.T01:CDS
AAAAGAGTTAGCAAACATGT+TGG 0.558912 8:-8625191 MsG0880042433.01.T01:exon
TACCACTTCTAACCCTGCGC+GGG 0.559995 8:+8622299 None:intergenic
TGGAAAGGGACTGGTTGGAA+AGG 0.561560 8:-8622926 MsG0880042433.01.T01:CDS
GTTGAATACTCATGCAGTGA+TGG 0.563079 8:-8620792 MsG0880042433.01.T01:CDS
ACACAGAGGATTAGCTGTTG+AGG 0.564066 8:-8620216 MsG0880042433.01.T01:intron
CATGTTGGGCATCTTTGACA+AGG 0.564613 8:-8625176 MsG0880042433.01.T01:CDS
CTTAAGGGCTTGTTCACCAT+CGG 0.566427 8:+8621893 None:intergenic
AAGGAAATCCTCCGCACCGA+TGG 0.567227 8:-8621909 MsG0880042433.01.T01:CDS
ATGGGATGCTATTAAGGCAT+GGG 0.568340 8:-8620123 MsG0880042433.01.T01:CDS
AAAATTACAGATTGTAACAA+AGG 0.568552 8:+8622050 None:intergenic
TATTCCGGAGTTCCTGGCTC+CGG 0.569747 8:+8619828 None:intergenic
TTTCCTTAAGGGCTGGCAAG+GGG 0.571197 8:+8621925 None:intergenic
CTTCATGCAGCTGTTAACTT+CGG 0.574032 8:-8619909 MsG0880042433.01.T01:CDS
ACTTCTAACCCTGCGCGGGT+AGG 0.574571 8:+8622303 None:intergenic
GAGAACGCAAAGAATGGGAT+AGG 0.576002 8:-8622417 MsG0880042433.01.T01:CDS
TGGAAGGAAGCTGTAGAAAA+GGG 0.576005 8:-8620029 MsG0880042433.01.T01:CDS
GTGTGGCAAACTTAATTCGA+TGG 0.576956 8:+8621112 None:intergenic
CCATATTTCTAGTCCGTCAA+CGG 0.578366 8:+8620142 None:intergenic
GGAGTCACCAGCATTGTTGG+TGG 0.578759 8:-8625040 MsG0880042433.01.T01:CDS
ATTAGTGCTACAAAGACTGA+TGG 0.579932 8:-8624965 MsG0880042433.01.T01:intron
CTTGTTCACCATCGGTGCGG+AGG 0.580219 8:+8621901 None:intergenic
TTTATTGTGTCACGGTAATG+GGG 0.581682 8:+8620704 None:intergenic
CTCTCCAAGATACACTTCAT+CGG 0.582621 8:+8619698 None:intergenic
CGAACGAAGGAGCAAAGTGT+AGG 0.584185 8:+8619530 None:intergenic
GAGGACACCGCCTTTACCGA+TGG 0.588131 8:+8625087 None:intergenic
TGGTGATATCACAGTAGAAG+AGG 0.588913 8:-8621370 MsG0880042433.01.T01:intron
ACGGTTAGGAATATCTTCAA+GGG 0.589822 8:+8622747 None:intergenic
GACGCTGCCGGAAATTTGAT+CGG 0.595337 8:-8625064 MsG0880042433.01.T01:CDS
ACACTGAAATTCAGAAATGG+TGG 0.595367 8:-8620049 MsG0880042433.01.T01:CDS
TATGGGATGCTATTAAGGCA+TGG 0.595717 8:-8620124 MsG0880042433.01.T01:CDS
TCAAATTTCCGGCAGCGTCG+AGG 0.595821 8:+8625068 None:intergenic
GCAAACTAGCTGAAATTGAA+GGG 0.596882 8:-8619614 MsG0880042433.01.T01:CDS
GTGTAGTTAGCAAGTCTGCA+TGG 0.598393 8:-8621646 MsG0880042433.01.T01:intron
AACTCCGGAATACGATGAGA+TGG 0.600020 8:-8619817 MsG0880042433.01.T01:CDS
CATTCATGCCATATTTGGAG+AGG 0.604180 8:-8621211 MsG0880042433.01.T01:CDS
AATATGGCATGAATGCATCA+TGG 0.606974 8:+8621219 None:intergenic
CTTGGAACATAAATCACACC+CGG 0.607189 8:+8622149 None:intergenic
GAATATCTTCAAGGGTCACA+CGG 0.608777 8:+8622755 None:intergenic
TGAAATTCAGAAATGGTGGA+AGG 0.610837 8:-8620045 MsG0880042433.01.T01:CDS
CAAGCTCTCATCAATGCTGA+CGG 0.612482 8:-8620662 MsG0880042433.01.T01:CDS
TCCAAGGATTGGACGAACAA+GGG 0.614423 8:+8622342 None:intergenic
CAATCACAGAAAGATCAACA+AGG 0.616597 8:+8619742 None:intergenic
TACCAGCTGATCTTATCAAG+AGG 0.619833 8:-8620550 MsG0880042433.01.T01:intron
CTTCAAGGGTCACACGGACA+AGG 0.620272 8:+8622761 None:intergenic
CACCCATCCCTACCCGCGCA+GGG 0.622764 8:-8622311 MsG0880042433.01.T01:CDS
GTTTGCATCTTAGGCCACCA+TGG 0.628665 8:+8619984 None:intergenic
AAAGTACCTCTAATTACTTG+AGG 0.628706 8:+8621861 None:intergenic
TTCAACGCCATAACGTCCAT+CGG 0.631507 8:-8625103 MsG0880042433.01.T01:CDS
TCACAAGACGAAGGCCATGA+GGG 0.633405 8:+8620183 None:intergenic
ATTACGGCCTAAGAAGGCAG+TGG 0.637013 8:+8625003 None:intergenic
TTATTGTGTCACGGTAATGG+GGG 0.638293 8:+8620705 None:intergenic
GATGGGTGCTAGATCCTCCA+AGG 0.639381 8:+8622326 None:intergenic
GCTCCCAAAGTTGGTAACTG+TGG 0.642576 8:+8622880 None:intergenic
GCAATTGCACTGGTCCGGTG+CGG 0.645224 8:+8619553 None:intergenic
TATTGGACCCCATTTGAGTG+TGG 0.645377 8:+8621095 None:intergenic
CTACCACTTCTAACCCTGCG+CGG 0.646220 8:+8622298 None:intergenic
TTCGGACAATATCCTTATGG+AGG 0.648654 8:-8619891 MsG0880042433.01.T01:CDS
ATCACAAGACGAAGGCCATG+AGG 0.648706 8:+8620182 None:intergenic
GTACCTCTAATTACTTGAGG+TGG 0.648845 8:+8621864 None:intergenic
AAGTTTGCCACACTCAAATG+GGG 0.650150 8:-8621102 MsG0880042433.01.T01:CDS
CACAAGACGAAGGCCATGAG+GGG 0.654691 8:+8620184 None:intergenic
CTTATACTACCCAACAGATG+AGG 0.654839 8:-8620084 MsG0880042433.01.T01:CDS
GAAGCTGTAGAAAAGGGTCA+TGG 0.659592 8:-8620023 MsG0880042433.01.T01:CDS
TACCCGCGCAGGGTTAGAAG+TGG 0.670924 8:-8622301 MsG0880042433.01.T01:CDS
GGGCTTGTTCACCATCGGTG+CGG 0.672585 8:+8621898 None:intergenic
CTTGAAGATATTCCTAACCG+TGG 0.678873 8:-8622745 MsG0880042433.01.T01:CDS
GAAGCTATCGAACTCATTCG+GGG 0.680201 8:+8622013 None:intergenic
AATCACAGAAAGATCAACAA+GGG 0.683243 8:+8619743 None:intergenic
GCTGCCGGAAATTTGATCGG+AGG 0.683387 8:-8625061 MsG0880042433.01.T01:CDS
ACTTGAAAGACAAGCCATGG+TGG 0.687448 8:-8619998 MsG0880042433.01.T01:CDS
GTGACTTGAAAGACAAGCCA+TGG 0.691001 8:-8620001 MsG0880042433.01.T01:CDS
GATCTCGGAAATCCAGATCG+TGG 0.691556 8:-8622370 MsG0880042433.01.T01:CDS
TTGAAGGGAAAATTACCAAG+AGG 0.691735 8:-8619599 MsG0880042433.01.T01:CDS
GATCCTAAGAGTGAGAAACC+GGG 0.695001 8:-8622167 MsG0880042433.01.T01:CDS
ATAACGTCCATCGGTAAAGG+CGG 0.695538 8:-8625094 MsG0880042433.01.T01:CDS
GATAGCTTCGATGAAGTGCG+CGG 0.701485 8:-8621999 MsG0880042433.01.T01:CDS
TCTAGTTTGAGAAACCGCAC+CGG 0.712219 8:-8619567 MsG0880042433.01.T01:CDS
GTATTCTTGCCTGCACACGA+AGG 0.719494 8:-8621056 MsG0880042433.01.T01:CDS
AGTCCTCTATCACAAGACGA+AGG 0.740779 8:+8620174 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATTGAATTTATTAC+AGG - Chr8:8622012-8622031 MsG0880042433.01.T01:CDS 10.0%
!! TAATAATAATCACTAAAAAA+GGG + Chr8:8621479-8621498 None:intergenic 10.0%
!! TCATGTTTATAATTATTTAT+TGG - Chr8:8621509-8621528 MsG0880042433.01.T01:intron 10.0%
!!! AAATTATTTTTTGATATAAC+AGG - Chr8:8623055-8623074 MsG0880042433.01.T01:intron 10.0%
!!! AATAATTGAAGTATTATTTT+TGG + Chr8:8619626-8619645 None:intergenic 10.0%
!!! CAATTTTTTATTAATAATTG+TGG + Chr8:8623708-8623727 None:intergenic 10.0%
!!! CGAAAAATAAATATTTTTAT+TGG + Chr8:8621548-8621567 None:intergenic 10.0%
!!! TGAGATTTTAAATTAATATA+AGG - Chr8:8620705-8620724 MsG0880042433.01.T01:CDS 10.0%
!!! TGTTAGATTAATTTTTTTAT+AGG + Chr8:8621922-8621941 None:intergenic 10.0%
!!! TTAATTTTTTTATAGGTATA+CGG + Chr8:8621915-8621934 None:intergenic 10.0%
!! CTAATAATAATCACTAAAAA+AGG + Chr8:8621480-8621499 None:intergenic 15.0%
!! GAAATAGTTAAAAAATATTG+AGG - Chr8:8620089-8620108 MsG0880042433.01.T01:CDS 15.0%
!! TAAAGAGTTAAAATTATCAT+AGG + Chr8:8619917-8619936 None:intergenic 15.0%
!! TAATAATAAATGTTGTTACA+AGG - Chr8:8620675-8620694 MsG0880042433.01.T01:CDS 15.0%
!! TAATATCTAACTAAACTTTA+GGG + Chr8:8620845-8620864 None:intergenic 15.0%
!! TACTTATAAGATAAACTAAT+TGG + Chr8:8620117-8620136 None:intergenic 15.0%
!!! AAACAACTTTTACTATTATT+AGG + Chr8:8620639-8620658 None:intergenic 15.0%
!!! AGGAAGATAAATTATTTTAT+TGG + Chr8:8619897-8619916 None:intergenic 15.0%
!!! ATTTTAATTAAAAGTGTGTT+TGG - Chr8:8620380-8620399 MsG0880042433.01.T01:intron 15.0%
!!! CCTTATTTAATTAAGTTTAA+GGG + Chr8:8620451-8620470 None:intergenic 15.0%
!!! TATTTAACTTTATGTGTTTT+TGG - Chr8:8619695-8619714 MsG0880042433.01.T01:CDS 15.0%
!!! TCCTTATTTAATTAAGTTTA+AGG + Chr8:8620452-8620471 None:intergenic 15.0%
!!! TTTTACTATTATTAGGTTAT+AGG + Chr8:8620632-8620651 None:intergenic 15.0%
!!! TTTTTTGATAATTGTATTCA+CGG - Chr8:8619816-8619835 MsG0880042433.01.T01:CDS 15.0%
!! AAAATGTACGTATATATTGT+GGG - Chr8:8621006-8621025 MsG0880042433.01.T01:CDS 20.0%
!! AAAATTACAGATTGTAACAA+AGG + Chr8:8622486-8622505 None:intergenic 20.0%
!! AACCTTAATGTTGAAAAATA+AGG + Chr8:8620206-8620225 None:intergenic 20.0%
!! AAGTTTCAATTAAAAGTCAT+TGG - Chr8:8623199-8623218 MsG0880042433.01.T01:intron 20.0%
!! AATTAGTAGAAGATTTATTC+CGG - Chr8:8624686-8624705 MsG0880042433.01.T01:intron 20.0%
!! ATAAATCTTCTACTAATTGT+TGG + Chr8:8624684-8624703 None:intergenic 20.0%
!! ATATTACTACATGAAAAGTT+AGG - Chr8:8624254-8624273 MsG0880042433.01.T01:intron 20.0%
!! ATCAGAAAATATAATTTCGA+TGG - Chr8:8624025-8624044 MsG0880042433.01.T01:intron 20.0%
!! ATTTAGAAAAAAATTGTGTG+TGG - Chr8:8625071-8625090 MsG0880042433.01.T01:CDS 20.0%
!! CCCTTAAACTTAATTAAATA+AGG - Chr8:8620448-8620467 MsG0880042433.01.T01:intron 20.0%
!! CTAATATCTAACTAAACTTT+AGG + Chr8:8620846-8620865 None:intergenic 20.0%
!! GGAATAAAAGCTTATAAATT+GGG + Chr8:8623810-8623829 None:intergenic 20.0%
!! TAAAATGTACGTATATATTG+TGG - Chr8:8621005-8621024 MsG0880042433.01.T01:CDS 20.0%
!! TAATAATTCTATGCCAATAT+TGG - Chr8:8624071-8624090 MsG0880042433.01.T01:intron 20.0%
!! TATGATGTTTATAATGATCT+CGG - Chr8:8622148-8622167 MsG0880042433.01.T01:CDS 20.0%
!! TGTGATTGAAATTAAATTTG+TGG - Chr8:8623251-8623270 MsG0880042433.01.T01:intron 20.0%
!!! AATTAATGTGTCCATTTTAT+AGG - Chr8:8622307-8622326 MsG0880042433.01.T01:CDS 20.0%
!!! ATTTTTAATTTTGTAGCAAG+TGG - Chr8:8621587-8621606 MsG0880042433.01.T01:CDS 20.0%
!!! CAATTATATTCTTTTTGGTA+GGG + Chr8:8621322-8621341 None:intergenic 20.0%
!!! CTATTTTCAATTTGAACTTT+AGG + Chr8:8624137-8624156 None:intergenic 20.0%
!!! GAAGGTACTAATTATATAAT+GGG + Chr8:8621300-8621319 None:intergenic 20.0%
!!! GATAAATTATTTTATTGGCA+TGG + Chr8:8619892-8619911 None:intergenic 20.0%
!!! TAATAGTAAAAGTTGTTTCA+AGG - Chr8:8620641-8620660 MsG0880042433.01.T01:CDS 20.0%
!!! TGATGTATTCATTTTCTTTA+TGG - Chr8:8621394-8621413 MsG0880042433.01.T01:CDS 20.0%
!!! TTCCTTATTTTTCAACATTA+AGG - Chr8:8620201-8620220 MsG0880042433.01.T01:CDS 20.0%
!!! TTTGAATATGATGCTAATTT+TGG - Chr8:8621701-8621720 MsG0880042433.01.T01:intron 20.0%
!!! TTTGGTTCAATTTTTAGAAA+GGG + Chr8:8620770-8620789 None:intergenic 20.0%
! AAAAAATTGTATGACATTGC+AGG - Chr8:8623719-8623738 MsG0880042433.01.T01:intron 25.0%
! AAATTCATAGCTTACATCAT+TGG + Chr8:8621885-8621904 None:intergenic 25.0%
! AAATTGTTTGTTTAACACAG+AGG - Chr8:8624303-8624322 MsG0880042433.01.T01:intron 25.0%
! AAATTTATCCTCTCCAAATA+TGG + Chr8:8623333-8623352 None:intergenic 25.0%
! AATCATCACATTGATGTTAT+TGG + Chr8:8625126-8625145 None:intergenic 25.0%
! AATCTTGCTCCATTATTATA+TGG - Chr8:8624589-8624608 MsG0880042433.01.T01:intron 25.0%
! AATTCTCCTAAAAAGTTTAG+CGG + Chr8:8620241-8620260 None:intergenic 25.0%
! AGTTAAATATGTCTCTCTAT+AGG + Chr8:8619684-8619703 None:intergenic 25.0%
! ATAACATCAATGTGATGATT+AGG - Chr8:8625126-8625145 MsG0880042433.01.T01:CDS 25.0%
! ATGACTTTATTCCATACATA+AGG + Chr8:8622446-8622465 None:intergenic 25.0%
! ATTAGAACGTTCCTATAAAA+TGG + Chr8:8622321-8622340 None:intergenic 25.0%
! ATTGGCATAGAATTATTAGT+GGG + Chr8:8624069-8624088 None:intergenic 25.0%
! ATTTGGCTAATTATATCTGT+TGG + Chr8:8622585-8622604 None:intergenic 25.0%
! CAATCAAAATGACTAGATTA+TGG + Chr8:8624100-8624119 None:intergenic 25.0%
! CATTGATATTTATTGTGTCA+CGG + Chr8:8623840-8623859 None:intergenic 25.0%
! CCTACCAAAAAGAATATAAT+TGG - Chr8:8621320-8621339 MsG0880042433.01.T01:intron 25.0%
! CGATACATTAAGAATACATT+TGG + Chr8:8622989-8623008 None:intergenic 25.0%
! GGACACATTAATTTCATTAA+CGG + Chr8:8622300-8622319 None:intergenic 25.0%
! GGGAATAAAAGCTTATAAAT+TGG + Chr8:8623811-8623830 None:intergenic 25.0%
! TAACAACATGATATAGACAA+TGG - Chr8:8620506-8620525 MsG0880042433.01.T01:intron 25.0%
! TAGATTATGGTTTCCAATAT+TGG + Chr8:8624087-8624106 None:intergenic 25.0%
! TAGCATATTGAATAAATGTG+TGG + Chr8:8619726-8619745 None:intergenic 25.0%
! TATTGGCATAGAATTATTAG+TGG + Chr8:8624070-8624089 None:intergenic 25.0%
! TCAATTTGATTGTAACTCAT+GGG - Chr8:8621817-8621836 MsG0880042433.01.T01:intron 25.0%
! TGAAATTAAATTTGTGGAAC+AGG - Chr8:8623257-8623276 MsG0880042433.01.T01:intron 25.0%
! TGACACGTTAGATTATATAA+GGG - Chr8:8621080-8621099 MsG0880042433.01.T01:CDS 25.0%
! TGATATAGACAATGGAATAA+TGG - Chr8:8620514-8620533 MsG0880042433.01.T01:intron 25.0%
! TTCAATTTGATTGTAACTCA+TGG - Chr8:8621816-8621835 MsG0880042433.01.T01:intron 25.0%
! TTCTAAATAGAGATACTGTT+GGG + Chr8:8625059-8625078 None:intergenic 25.0%
! TTTCTAAATAGAGATACTGT+TGG + Chr8:8625060-8625079 None:intergenic 25.0%
!! ATCGATAGTTAAGAGTTTTA+TGG - Chr8:8619995-8620014 MsG0880042433.01.T01:CDS 25.0%
!! CTTTTATCAAGTTACTCTAT+GGG + Chr8:8621246-8621265 None:intergenic 25.0%
!! GAGAGAATAATAACAAGTTT+TGG - Chr8:8624853-8624872 MsG0880042433.01.T01:intron 25.0%
!! GGTACCAATTATATTCTTTT+TGG + Chr8:8621327-8621346 None:intergenic 25.0%
!! TCTTTTATCAAGTTACTCTA+TGG + Chr8:8621247-8621266 None:intergenic 25.0%
!! TTATATTTTCTGATGAGTCT+TGG + Chr8:8624019-8624038 None:intergenic 25.0%
!! TTCAATTTGAACTTTAGGAA+AGG + Chr8:8624132-8624151 None:intergenic 25.0%
!! TTGAAGTCCAAAACATTTTT+GGG + Chr8:8619415-8619434 None:intergenic 25.0%
!! TTTTATAGGAACGTTCTAAT+TGG - Chr8:8622321-8622340 MsG0880042433.01.T01:CDS 25.0%
!!! CCAATTATATTCTTTTTGGT+AGG + Chr8:8621323-8621342 None:intergenic 25.0%
!!! GATTTTTAATTTGACGTGTT+TGG + Chr8:8620788-8620807 None:intergenic 25.0%
!!! GGAAGGTACTAATTATATAA+TGG + Chr8:8621301-8621320 None:intergenic 25.0%
!!! GGAATAATGGATTAGTAATA+GGG - Chr8:8620527-8620546 MsG0880042433.01.T01:intron 25.0%
!!! GTTTGGTTCAATTTTTAGAA+AGG + Chr8:8620771-8620790 None:intergenic 25.0%
!!! TAAAACTTGTGTTTTTTCTC+AGG - Chr8:8622772-8622791 MsG0880042433.01.T01:CDS 25.0%
!!! TCTTCTCTAAAGTGATTTAA+TGG + Chr8:8622064-8622083 None:intergenic 25.0%
!!! TGGAATAATGGATTAGTAAT+AGG - Chr8:8620526-8620545 MsG0880042433.01.T01:intron 25.0%
AAAAGAGTTAGCAAACATGT+TGG - Chr8:8619342-8619361 MsG0880042433.01.T01:three_prime_UTR 30.0%
AAACTTAATTCGATGGCTAA+TGG + Chr8:8623417-8623436 None:intergenic 30.0%
AAAGAGTTAGCAAACATGTT+GGG - Chr8:8619343-8619362 MsG0880042433.01.T01:three_prime_UTR 30.0%
AATCAAATTGAACACTTCCA+CGG + Chr8:8621808-8621827 None:intergenic 30.0%
AATCACAGAAAGATCAACAA+GGG + Chr8:8624793-8624812 None:intergenic 30.0%
ACACCTTCATAAAAAGTAGT+TGG - Chr8:8621115-8621134 MsG0880042433.01.T01:CDS 30.0%
AGAAATATGGGATGCTATTA+AGG - Chr8:8624404-8624423 MsG0880042433.01.T01:intron 30.0%
AGAAGCTGTCCATATAATAA+TGG + Chr8:8624601-8624620 None:intergenic 30.0%
AGTATAAGGATACATAGTCT+TGG + Chr8:8624437-8624456 None:intergenic 30.0%
ATAAAAGACACCTTCACAAA+AGG - Chr8:8621259-8621278 MsG0880042433.01.T01:intron 30.0%
ATCTTCTACTAATTGTTGGA+CGG + Chr8:8624680-8624699 None:intergenic 30.0%
ATGAGAATTGTTAGTACCTT+GGG - Chr8:8620282-8620301 MsG0880042433.01.T01:intron 30.0%
ATTTATTGTGTCACGGTAAT+GGG + Chr8:8623833-8623852 None:intergenic 30.0%
CGTGACACAATAAATATCAA+TGG - Chr8:8623838-8623857 MsG0880042433.01.T01:intron 30.0%
CTAAATGGAACATAAACAAG+TGG - Chr8:8621364-8621383 MsG0880042433.01.T01:intron 30.0%
CTATGAAGAATTCATACCAA+TGG + Chr8:8623578-8623597 None:intergenic 30.0%
CTGACACGTTAGATTATATA+AGG - Chr8:8621079-8621098 MsG0880042433.01.T01:CDS 30.0%
CTTGTTTATGTTCCATTTAG+TGG + Chr8:8621364-8621383 None:intergenic 30.0%
GAAGAAATCTCAATGGAATT+TGG + Chr8:8623925-8623944 None:intergenic 30.0%
GAGTAATGAAAGTTGTTACA+AGG - Chr8:8620560-8620579 MsG0880042433.01.T01:CDS 30.0%
TAGACACTGAAATTCAGAAA+TGG - Chr8:8624481-8624500 MsG0880042433.01.T01:intron 30.0%
TATGAGAATTGTTAGTACCT+TGG - Chr8:8620281-8620300 MsG0880042433.01.T01:intron 30.0%
TATTTATTGTGTCACGGTAA+TGG + Chr8:8623834-8623853 None:intergenic 30.0%
TGGAATACTGATGAAGAATT+TGG - Chr8:8622907-8622926 MsG0880042433.01.T01:CDS 30.0%
TTAATAATGCTCAGGTGTAT+TGG + Chr8:8620988-8621007 None:intergenic 30.0%
TTAGTAATAGGGTTGTTACA+AGG - Chr8:8620538-8620557 MsG0880042433.01.T01:intron 30.0%
TTAGTGGAAAAACAATGACA+AGG + Chr8:8621348-8621367 None:intergenic 30.0%
TTCTGCAGTTTACAAGAATT+GGG - Chr8:8623942-8623961 MsG0880042433.01.T01:intron 30.0%
TTCTTATGTAAAATGCTCCA+GGG + Chr8:8621730-8621749 None:intergenic 30.0%
TTGGCATAGAATTATTAGTG+GGG + Chr8:8624068-8624087 None:intergenic 30.0%
TTTCTTATGTAAAATGCTCC+AGG + Chr8:8621731-8621750 None:intergenic 30.0%
! AAAGTACCTCTAATTACTTG+AGG + Chr8:8622675-8622694 None:intergenic 30.0%
! AATTTTGTAGCAAGTGGAAA+GGG - Chr8:8621593-8621612 MsG0880042433.01.T01:CDS 30.0%
! CTATTTGTTGCTATGATGAA+TGG + Chr8:8623769-8623788 None:intergenic 30.0%
! GTTCCAAGAGATGAAAATTT+TGG - Chr8:8622399-8622418 MsG0880042433.01.T01:CDS 30.0%
! GTTGAAGTCCAAAACATTTT+TGG + Chr8:8619416-8619435 None:intergenic 30.0%
! TAATTTTGTAGCAAGTGGAA+AGG - Chr8:8621592-8621611 MsG0880042433.01.T01:CDS 30.0%
! TATAGAGCAAACATTTTGTC+CGG - Chr8:8623897-8623916 MsG0880042433.01.T01:intron 30.0%
! TGACCAAAATTTTCATCTCT+TGG + Chr8:8622405-8622424 None:intergenic 30.0%
!! ACATGTTTGCTAACTCTTTT+TGG + Chr8:8619342-8619361 None:intergenic 30.0%
!! CGTACATTTTAATAATGCTC+AGG + Chr8:8620996-8621015 None:intergenic 30.0%
!! GTCATTGTTTTTCCACTAAA+TGG - Chr8:8621349-8621368 MsG0880042433.01.T01:intron 30.0%
!! GTTCAATTTTTAGAAAGGGA+GGG + Chr8:8620766-8620785 None:intergenic 30.0%
!! TATATTCTTTTTGGTAGGGA+AGG + Chr8:8621318-8621337 None:intergenic 30.0%
!! TTCAATTTTTAGAAAGGGAG+GGG + Chr8:8620765-8620784 None:intergenic 30.0%
!!! ACACCAACTACTTTTTATGA+AGG + Chr8:8621210-8621229 None:intergenic 30.0%
AAAGTGAAAATCACACCTTG+AGG + Chr8:8621161-8621180 None:intergenic 35.0%
AACTGCAGAAGAAATCTCAA+TGG + Chr8:8623932-8623951 None:intergenic 35.0%
AACTTCGGACAATATCCTTA+TGG - Chr8:8624639-8624658 MsG0880042433.01.T01:intron 35.0%
AATATGGCATGAATGCATCA+TGG + Chr8:8623317-8623336 None:intergenic 35.0%
ACAAAATTCTGCTATTCTCG+AGG - Chr8:8624212-8624231 MsG0880042433.01.T01:intron 35.0%
ACAACATCACTGCTGTATTT+GGG - Chr8:8625191-8625210 MsG0880042433.01.T01:exon 35.0%
ACACTGAAATTCAGAAATGG+TGG - Chr8:8624484-8624503 MsG0880042433.01.T01:intron 35.0%
ACGAACATGTTAACTATAGG+TGG + Chr8:8622714-8622733 None:intergenic 35.0%
ACGGTTAGGAATATCTTCAA+GGG + Chr8:8621789-8621808 None:intergenic 35.0%
ACTAGATTCATTGTTCCTCT+TGG + Chr8:8624952-8624971 None:intergenic 35.0%
AGAGGAATAATCTCTTTCCA+TGG + Chr8:8623287-8623306 None:intergenic 35.0%
AGCAAACTAGCTGAAATTGA+AGG - Chr8:8624918-8624937 MsG0880042433.01.T01:intron 35.0%
ATCTTGTTCTTGCAAGATGA+TGG - Chr8:8623381-8623400 MsG0880042433.01.T01:intron 35.0%
ATGCATCATGGTAATCTAAG+AGG + Chr8:8623305-8623324 None:intergenic 35.0%
ATTAGTGCTACAAAGACTGA+TGG - Chr8:8619568-8619587 MsG0880042433.01.T01:CDS 35.0%
CAATCACAGAAAGATCAACA+AGG + Chr8:8624794-8624813 None:intergenic 35.0%
CACCTTCATAAAAAGTAGTG+TGG - Chr8:8621116-8621135 MsG0880042433.01.T01:CDS 35.0%
CTAAAGTGATTTAATGGAGC+TGG + Chr8:8622058-8622077 None:intergenic 35.0%
CTTCTGCAGTTTACAAGAAT+TGG - Chr8:8623941-8623960 MsG0880042433.01.T01:intron 35.0%
GAACACTTAGAGACTAATCT+TGG - Chr8:8623143-8623162 MsG0880042433.01.T01:intron 35.0%
GAAGAAGGTTTAACATTCAG+AGG - Chr8:8625029-8625048 MsG0880042433.01.T01:CDS 35.0%
GCAAACTAGCTGAAATTGAA+GGG - Chr8:8624919-8624938 MsG0880042433.01.T01:intron 35.0%
GGTAGAAAACCAACTAGAAA+AGG - Chr8:8622253-8622272 MsG0880042433.01.T01:intron 35.0%
GTACGTAACTATATCTGCAT+TGG + Chr8:8623644-8623663 None:intergenic 35.0%
GTGACGAACATGTTAACTAT+AGG + Chr8:8622717-8622736 None:intergenic 35.0%
TAAGTTTGCCACACTCAAAT+GGG - Chr8:8623430-8623449 MsG0880042433.01.T01:intron 35.0%
TACAACATCACTGCTGTATT+TGG - Chr8:8625190-8625209 MsG0880042433.01.T01:exon 35.0%
TACAATTTGGATGTTGGCAA+AGG - Chr8:8623509-8623528 MsG0880042433.01.T01:intron 35.0%
TCAACTGCATAGAGACATTA+CGG + Chr8:8619549-8619568 None:intergenic 35.0%
TCATCAGACTTCCTTATGTA+TGG - Chr8:8622432-8622451 MsG0880042433.01.T01:CDS 35.0%
TCTTGAACAGTTTGCATCTT+AGG + Chr8:8624561-8624580 None:intergenic 35.0%
TCTTGTTCTTGCAAGATGAT+GGG - Chr8:8623382-8623401 MsG0880042433.01.T01:intron 35.0%
TGAAGAAGACGAATCACATT+AGG + Chr8:8622958-8622977 None:intergenic 35.0%
TGATGCATTCATGCCATATT+TGG - Chr8:8623317-8623336 MsG0880042433.01.T01:intron 35.0%
TGGCATAGAATTATTAGTGG+GGG + Chr8:8624067-8624086 None:intergenic 35.0%
TTAAGTTTGCCACACTCAAA+TGG - Chr8:8623429-8623448 MsG0880042433.01.T01:intron 35.0%
TTCAGGATATATCCTCCATA+AGG + Chr8:8624657-8624676 None:intergenic 35.0%
TTGAAGGGAAAATTACCAAG+AGG - Chr8:8624934-8624953 MsG0880042433.01.T01:intron 35.0%
TTGTGGCATACATTATCTCT+TGG + Chr8:8623691-8623710 None:intergenic 35.0%
TTTATTGTGTCACGGTAATG+GGG + Chr8:8623832-8623851 None:intergenic 35.0%
! AAAAGTGTGTTTGGTTCACA+AGG - Chr8:8620389-8620408 MsG0880042433.01.T01:intron 35.0%
! AAAGTGTGTTTGGTTCACAA+GGG - Chr8:8620390-8620409 MsG0880042433.01.T01:intron 35.0%
! ATAGAAGACACCTTTTGTGA+AGG + Chr8:8621272-8621291 None:intergenic 35.0%
! ATAGAGCAAACATTTTGTCC+GGG - Chr8:8623898-8623917 MsG0880042433.01.T01:intron 35.0%
! ATTTGGTTCGAGAATTAGGA+GGG - Chr8:8620308-8620327 MsG0880042433.01.T01:intron 35.0%
! CGAAAGTACAATTTGGATGT+TGG - Chr8:8623503-8623522 MsG0880042433.01.T01:intron 35.0%
! GTTCTCAAATATGCCTTTTG+AGG + Chr8:8624750-8624769 None:intergenic 35.0%
! GTTGATGCCCAAAAATGTTT+TGG - Chr8:8619405-8619424 MsG0880042433.01.T01:three_prime_UTR 35.0%
! GTTTCACCGCTAAACTTTTT+AGG - Chr8:8620232-8620251 MsG0880042433.01.T01:intron 35.0%
! TATTTTCTGATGAGTCTTGG+TGG + Chr8:8624016-8624035 None:intergenic 35.0%
! TGAAATTCAGAAATGGTGGA+AGG - Chr8:8624488-8624507 MsG0880042433.01.T01:intron 35.0%
! TTTGCTTCCAAACTTTTGGA+AGG + Chr8:8624904-8624923 None:intergenic 35.0%
! TTTTATCAAGTCACACCTCA+AGG - Chr8:8621143-8621162 MsG0880042433.01.T01:CDS 35.0%
!! AAGGTGTCGAAAGTACAATT+TGG - Chr8:8623496-8623515 MsG0880042433.01.T01:intron 35.0%
!! CATCTAATGTGCTTTTTGGT+GGG + Chr8:8623085-8623104 None:intergenic 35.0%
!! CATTCTGTTTCTATAACCCT+TGG - Chr8:8623618-8623637 MsG0880042433.01.T01:intron 35.0%
!! GGTTCAATTTTTAGAAAGGG+AGG + Chr8:8620767-8620786 None:intergenic 35.0%
!! GTGAACTAACCTTTTCTAGT+TGG + Chr8:8622265-8622284 None:intergenic 35.0%
!! GTTTTGGACATCTGATACAA+GGG - Chr8:8624869-8624888 MsG0880042433.01.T01:intron 35.0%
!!! AGTTTTGGACATCTGATACA+AGG - Chr8:8624868-8624887 MsG0880042433.01.T01:intron 35.0%
!!! CACCACACTACTTTTTATGA+AGG + Chr8:8621121-8621140 None:intergenic 35.0%
!!! CTAGTTTGCTTCCAAACTTT+TGG + Chr8:8624908-8624927 None:intergenic 35.0%
AACTGGAGAACGCAAAGAAT+GGG - Chr8:8622111-8622130 MsG0880042433.01.T01:CDS 40.0%
AAGTTTGCCACACTCAAATG+GGG - Chr8:8623431-8623450 MsG0880042433.01.T01:intron 40.0%
AATCTAAGAGGAGATGGAAC+TGG - Chr8:8622094-8622113 MsG0880042433.01.T01:CDS 40.0%
AATTGAACACTTCCACGGTT+AGG + Chr8:8621803-8621822 None:intergenic 40.0%
ACATTAGATGCCACTGTCTA+TGG - Chr8:8623095-8623114 MsG0880042433.01.T01:intron 40.0%
AGATCCTAAGAGTGAGAAAC+CGG - Chr8:8622365-8622384 MsG0880042433.01.T01:CDS 40.0%
ATCATCAACTCATGAGCCAT+TGG - Chr8:8623559-8623578 MsG0880042433.01.T01:intron 40.0%
ATCTCAATGGAATTTGGTCC+CGG + Chr8:8623919-8623938 None:intergenic 40.0%
ATGGGATGCTATTAAGGCAT+GGG - Chr8:8624410-8624429 MsG0880042433.01.T01:intron 40.0%
ATGTTGGGCATCTTTGACAA+GGG - Chr8:8619358-8619377 MsG0880042433.01.T01:three_prime_UTR 40.0%
ATTTGTACTGCCTCATCTGT+TGG + Chr8:8624462-8624481 None:intergenic 40.0%
CACGGTTAGGAATATCTTCA+AGG + Chr8:8621790-8621809 None:intergenic 40.0%
CAGAAAGATCAACAAGGGTT+TGG + Chr8:8624788-8624807 None:intergenic 40.0%
CATTCATGCCATATTTGGAG+AGG - Chr8:8623322-8623341 MsG0880042433.01.T01:intron 40.0%
CTACCACAGTTACCAACTTT+GGG - Chr8:8621650-8621669 MsG0880042433.01.T01:intron 40.0%
CTCATCTGTTGGGTAGTATA+AGG + Chr8:8624451-8624470 None:intergenic 40.0%
CTCCTAATTCTCGAACCAAA+TGG + Chr8:8620309-8620328 None:intergenic 40.0%
CTCTCCAAGATACACTTCAT+CGG + Chr8:8624838-8624857 None:intergenic 40.0%
CTTATACTACCCAACAGATG+AGG - Chr8:8624449-8624468 MsG0880042433.01.T01:intron 40.0%
CTTCATGCAGCTGTTAACTT+CGG - Chr8:8624624-8624643 MsG0880042433.01.T01:intron 40.0%
CTTGAAGATATTCCTAACCG+TGG - Chr8:8621788-8621807 MsG0880042433.01.T01:intron 40.0%
CTTGGAACATAAATCACACC+CGG + Chr8:8622387-8622406 None:intergenic 40.0%
CTTTGCTTTCAGCACCATAT+TGG + Chr8:8623458-8623477 None:intergenic 40.0%
GAAGAGTTGCAGAATCTAAG+AGG - Chr8:8622082-8622101 MsG0880042433.01.T01:CDS 40.0%
GAATATCTTCAAGGGTCACA+CGG + Chr8:8621781-8621800 None:intergenic 40.0%
GACAAGGGCCAAAAAATCAA+GGG - Chr8:8619373-8619392 MsG0880042433.01.T01:three_prime_UTR 40.0%
GATGCAAACTGTTCAAGACT+TGG - Chr8:8624563-8624582 MsG0880042433.01.T01:intron 40.0%
GATGGTGAAAAGTCCTCAAA+AGG - Chr8:8624734-8624753 MsG0880042433.01.T01:intron 40.0%
GTACCTCTAATTACTTGAGG+TGG + Chr8:8622672-8622691 None:intergenic 40.0%
GTGTGGCAAACTTAATTCGA+TGG + Chr8:8623424-8623443 None:intergenic 40.0%
GTTCAAGCCTTCCAAAAGTT+TGG - Chr8:8624894-8624913 MsG0880042433.01.T01:intron 40.0%
GTTGAATACTCATGCAGTGA+TGG - Chr8:8623741-8623760 MsG0880042433.01.T01:intron 40.0%
TACCAGCTGATCTTATCAAG+AGG - Chr8:8623983-8624002 MsG0880042433.01.T01:intron 40.0%
TACCTCTTGATAAGATCAGC+TGG + Chr8:8623988-8624007 None:intergenic 40.0%
TACTAATTGTTGGACGGTTC+AGG + Chr8:8624674-8624693 None:intergenic 40.0%
TATGGGATGCTATTAAGGCA+TGG - Chr8:8624409-8624428 MsG0880042433.01.T01:intron 40.0%
TCCAAAACTCTCGAACCAAA+CGG - Chr8:8620818-8620837 MsG0880042433.01.T01:intron 40.0%
TCGAAGCTATCGAACTCATT+CGG + Chr8:8622525-8622544 None:intergenic 40.0%
TCTACCACAGTTACCAACTT+TGG - Chr8:8621649-8621668 MsG0880042433.01.T01:intron 40.0%
TCTGCTATTCTCGAGGTAAT+TGG - Chr8:8624219-8624238 MsG0880042433.01.T01:intron 40.0%
TGACAAGGGCCAAAAAATCA+AGG - Chr8:8619372-8619391 MsG0880042433.01.T01:three_prime_UTR 40.0%
TGGAAGGAAGCTGTAGAAAA+GGG - Chr8:8624504-8624523 MsG0880042433.01.T01:intron 40.0%
TGGTGATATCACAGTAGAAG+AGG - Chr8:8623163-8623182 MsG0880042433.01.T01:intron 40.0%
TTCACCATCTCATCGTATTC+CGG + Chr8:8624723-8624742 None:intergenic 40.0%
TTCGGACAATATCCTTATGG+AGG - Chr8:8624642-8624661 MsG0880042433.01.T01:intron 40.0%
TTGCAGAATCTAAGAGGAGA+TGG - Chr8:8622088-8622107 MsG0880042433.01.T01:CDS 40.0%
TTTGTACTGCCTCATCTGTT+GGG + Chr8:8624461-8624480 None:intergenic 40.0%
! AACTATATCTGCATTGGCCA+AGG + Chr8:8623638-8623657 None:intergenic 40.0%
! AAGTGTGTTTGGTTCACAAG+GGG - Chr8:8620391-8620410 MsG0880042433.01.T01:intron 40.0%
! ACTATATCTGCATTGGCCAA+GGG + Chr8:8623637-8623656 None:intergenic 40.0%
! CATTTGGTTCGAGAATTAGG+AGG - Chr8:8620307-8620326 MsG0880042433.01.T01:intron 40.0%
! GTCCATTTGGTTCGAGAATT+AGG - Chr8:8620304-8620323 MsG0880042433.01.T01:intron 40.0%
! GTGGCATCTAATGTGCTTTT+TGG + Chr8:8623089-8623108 None:intergenic 40.0%
! TCAACAAGGGTTTGGTACTT+TGG + Chr8:8624780-8624799 None:intergenic 40.0%
! TTATTGTGTCACGGTAATGG+GGG + Chr8:8623831-8623850 None:intergenic 40.0%
! TTTGGTTCGAGAATTAGGAG+GGG - Chr8:8620309-8620328 MsG0880042433.01.T01:intron 40.0%
!! ACTAAACTTTAGGGTCCGTT+TGG + Chr8:8620836-8620855 None:intergenic 40.0%
!! CCATATTTCTAGTCCGTCAA+CGG + Chr8:8624394-8624413 None:intergenic 40.0%
!! CGTTGACGGACTAGAAATAT+GGG - Chr8:8624392-8624411 MsG0880042433.01.T01:intron 40.0%
!! GCATCTAATGTGCTTTTTGG+TGG + Chr8:8623086-8623105 None:intergenic 40.0%
!! GTTTTGATCACCATAGACAG+TGG + Chr8:8623108-8623127 None:intergenic 40.0%
!! TTGAGGTGGTGGAAACTTAA+GGG + Chr8:8622658-8622677 None:intergenic 40.0%
!!! GATGCTAATTTTGGAATCCC+TGG - Chr8:8621710-8621729 MsG0880042433.01.T01:intron 40.0%
!!! TTTGGTTCGAGAGTTTTGGA+GGG + Chr8:8620818-8620837 None:intergenic 40.0%
AAAGTGTAGGGCAATTGCAC+TGG + Chr8:8624993-8625012 None:intergenic 45.0%
AACAACTCCACCAACAATGC+TGG + Chr8:8619503-8619522 None:intergenic 45.0%
AACCTTCTTCACTCGAACGA+AGG + Chr8:8625019-8625038 None:intergenic 45.0%
AACTCCGGAATACGATGAGA+TGG - Chr8:8624716-8624735 MsG0880042433.01.T01:intron 45.0%
AATGGAGCTGGTGTTTGACT+TGG + Chr8:8622046-8622065 None:intergenic 45.0%
ACTTGAAAGACAAGCCATGG+TGG - Chr8:8624535-8624554 MsG0880042433.01.T01:intron 45.0%
AGAAGATTTATTCCGGAGCC+AGG - Chr8:8624693-8624712 MsG0880042433.01.T01:intron 45.0%
AGAGACATTACGGCCTAAGA+AGG + Chr8:8619539-8619558 None:intergenic 45.0%
AGTCCTCTATCACAAGACGA+AGG + Chr8:8624362-8624381 None:intergenic 45.0%
ATAACGTCCATCGGTAAAGG+CGG - Chr8:8619439-8619458 MsG0880042433.01.T01:three_prime_UTR 45.0%
CAAGCTCTCATCAATGCTGA+CGG - Chr8:8623871-8623890 MsG0880042433.01.T01:intron 45.0%
CACTCAAATGGGGTCCAATA+TGG - Chr8:8623441-8623460 MsG0880042433.01.T01:intron 45.0%
CATGTTGGGCATCTTTGACA+AGG - Chr8:8619357-8619376 MsG0880042433.01.T01:three_prime_UTR 45.0%
CATTATCTCTTGGCCAATGC+AGG + Chr8:8623681-8623700 None:intergenic 45.0%
CCACCACCTCAAGTAATTAG+AGG - Chr8:8622666-8622685 MsG0880042433.01.T01:CDS 45.0%
CCTCTAATTACTTGAGGTGG+TGG + Chr8:8622669-8622688 None:intergenic 45.0%
CGAAGCTATCGAACTCATTC+GGG + Chr8:8622524-8622543 None:intergenic 45.0%
GAACGAAGGAGCAAAGTGTA+GGG + Chr8:8625005-8625024 None:intergenic 45.0%
GAACTGGAGAACGCAAAGAA+TGG - Chr8:8622110-8622129 MsG0880042433.01.T01:CDS 45.0%
GAAGCTATCGAACTCATTCG+GGG + Chr8:8622523-8622542 None:intergenic 45.0%
GAAGCTGTAGAAAAGGGTCA+TGG - Chr8:8624510-8624529 MsG0880042433.01.T01:intron 45.0%
GACTCCTCCGATCAAATTTC+CGG + Chr8:8619479-8619498 None:intergenic 45.0%
GAGAACGCAAAGAATGGGAT+AGG - Chr8:8622116-8622135 MsG0880042433.01.T01:CDS 45.0%
GATCCTAAGAGTGAGAAACC+GGG - Chr8:8622366-8622385 MsG0880042433.01.T01:CDS 45.0%
GTGACTTGAAAGACAAGCCA+TGG - Chr8:8624532-8624551 MsG0880042433.01.T01:intron 45.0%
GTGCAAAAGCTTACGCTACA+AGG - Chr8:8623355-8623374 MsG0880042433.01.T01:intron 45.0%
GTGGAAGGAAGCTGTAGAAA+AGG - Chr8:8624503-8624522 MsG0880042433.01.T01:intron 45.0%
GTGTAGTTAGCAAGTCTGCA+TGG - Chr8:8622887-8622906 MsG0880042433.01.T01:CDS 45.0%
GTTAGTACCTTGGGTCCATT+TGG - Chr8:8620291-8620310 MsG0880042433.01.T01:intron 45.0%
TATTGGACCCCATTTGAGTG+TGG + Chr8:8623441-8623460 None:intergenic 45.0%
TCCAAGGATTGGACGAACAA+GGG + Chr8:8622194-8622213 None:intergenic 45.0%
TCCACTATTGCTTTGCACCA+TGG - Chr8:8625249-8625268 MsG0880042433.01.T01:five_prime_UTR 45.0%
TCTTGTCTTGCTCCCAAAGT+TGG + Chr8:8621665-8621684 None:intergenic 45.0%
TGCTCAGGTGTATTGGAGTT+TGG + Chr8:8620981-8621000 None:intergenic 45.0%
TTCAACGCCATAACGTCCAT+CGG - Chr8:8619430-8619449 MsG0880042433.01.T01:three_prime_UTR 45.0%
TTTGGAAGAGAGATGCTTGC+TGG - Chr8:8622925-8622944 MsG0880042433.01.T01:CDS 45.0%
! ATTTCCTTAAGGGCTGGCAA+GGG + Chr8:8622612-8622631 None:intergenic 45.0%
! CTTAAGGGCTTGTTCACCAT+CGG + Chr8:8622643-8622662 None:intergenic 45.0%
! TCTAGTTTGAGAAACCGCAC+CGG - Chr8:8624966-8624985 MsG0880042433.01.T01:CDS 45.0%
! TGAGCTTAGCTCAGTTGGTA+AGG - Chr8:8619760-8619779 MsG0880042433.01.T01:CDS 45.0%
!! ACACAGAGGATTAGCTGTTG+AGG - Chr8:8624317-8624336 MsG0880042433.01.T01:intron 45.0%
!! AGGAATTTTAACGGAGGGGA+GGG - Chr8:8620347-8620366 MsG0880042433.01.T01:intron 45.0%
!! AGGGGAGGAATTTTAACGGA+GGG - Chr8:8620342-8620361 MsG0880042433.01.T01:intron 45.0%
!! CCAAAAAATCAAGGGCACTG+TGG - Chr8:8619381-8619400 MsG0880042433.01.T01:three_prime_UTR 45.0%
!! CCGTTGACGGACTAGAAATA+TGG - Chr8:8624391-8624410 MsG0880042433.01.T01:intron 45.0%
!! CTTGAGGTGGTGGAAACTTA+AGG + Chr8:8622659-8622678 None:intergenic 45.0%
!! GTTTGGTTCGAGAGTTTTGG+AGG + Chr8:8620819-8620838 None:intergenic 45.0%
!! TCCGTTTGGTTCGAGAGTTT+TGG + Chr8:8620822-8620841 None:intergenic 45.0%
!!! CCACAGTGCCCTTGATTTTT+TGG + Chr8:8619384-8619403 None:intergenic 45.0%
!!! TTGGTTCGAGAGTTTTGGAG+GGG + Chr8:8620817-8620836 None:intergenic 45.0%
!!! AAAACAATAATATAATATTT+TGG - Chr8:8621045-8621064 MsG0880042433.01.T01:CDS 5.0%
!!! AAACAATAATATAATATTTT+GGG - Chr8:8621046-8621065 MsG0880042433.01.T01:CDS 5.0%
ACACCCGGTTTCTCACTCTT+AGG + Chr8:8622372-8622391 None:intergenic 50.0%
ATCACAAGACGAAGGCCATG+AGG + Chr8:8624354-8624373 None:intergenic 50.0%
ATTACGGCCTAAGAAGGCAG+TGG + Chr8:8619533-8619552 None:intergenic 50.0%
CGAACGAAGGAGCAAAGTGT+AGG + Chr8:8625006-8625025 None:intergenic 50.0%
CTAGTCCGTCAACGGCATAA+GGG + Chr8:8624386-8624405 None:intergenic 50.0%
CTCCAAGGATTGGACGAACA+AGG + Chr8:8622195-8622214 None:intergenic 50.0%
CTCCTTCGTTCGAGTGAAGA+AGG - Chr8:8625014-8625033 MsG0880042433.01.T01:CDS 50.0%
CTGCATAGCTACACCTGCAT+TGG - Chr8:8623665-8623684 MsG0880042433.01.T01:intron 50.0%
CTTGTTCGTCCAATCCTTGG+AGG - Chr8:8622193-8622212 MsG0880042433.01.T01:intron 50.0%
GACGCTGCCGGAAATTTGAT+CGG - Chr8:8619469-8619488 MsG0880042433.01.T01:exon 50.0%
GACTACCCTTATGCCGTTGA+CGG - Chr8:8624378-8624397 MsG0880042433.01.T01:intron 50.0%
GATACTGCCACTGCCTTCTT+AGG - Chr8:8619523-8619542 MsG0880042433.01.T01:CDS 50.0%
GATAGCTTCGATGAAGTGCG+CGG - Chr8:8622534-8622553 MsG0880042433.01.T01:intron 50.0%
GATCTCGGAAATCCAGATCG+TGG - Chr8:8622163-8622182 MsG0880042433.01.T01:CDS 50.0%
GCCATAACGTCCATCGGTAA+AGG - Chr8:8619436-8619455 MsG0880042433.01.T01:three_prime_UTR 50.0%
GCCTTTACCGATGGACGTTA+TGG + Chr8:8619440-8619459 None:intergenic 50.0%
GCGTCCGATGAAGTGTATCT+TGG - Chr8:8624831-8624850 MsG0880042433.01.T01:intron 50.0%
GGTGCGGAGGATTTCCTTAA+GGG + Chr8:8622622-8622641 None:intergenic 50.0%
GTATTCTTGCCTGCACACGA+AGG - Chr8:8623477-8623496 MsG0880042433.01.T01:intron 50.0%
GTGCTAGATCCTCCAAGGAT+TGG + Chr8:8622205-8622224 None:intergenic 50.0%
GTTCGAGAATTAGGAGGGGA+GGG - Chr8:8620313-8620332 MsG0880042433.01.T01:intron 50.0%
GTTTGCATCTTAGGCCACCA+TGG + Chr8:8624552-8624571 None:intergenic 50.0%
TCACAAGACGAAGGCCATGA+GGG + Chr8:8624353-8624372 None:intergenic 50.0%
TCATCGTATTCCGGAGTTCC+TGG + Chr8:8624714-8624733 None:intergenic 50.0%
TCTAGTCCGTCAACGGCATA+AGG + Chr8:8624387-8624406 None:intergenic 50.0%
TCTCGAACCAAATGGACCCA+AGG + Chr8:8620301-8620320 None:intergenic 50.0%
TGGCCTTCGTCTTGTGATAG+AGG - Chr8:8624356-8624375 MsG0880042433.01.T01:intron 50.0%
TGTAGCAAGTGGAAAGGGAC+TGG - Chr8:8621598-8621617 MsG0880042433.01.T01:CDS 50.0%
TTCGAGAATTAGGAGGGGAG+GGG - Chr8:8620314-8620333 MsG0880042433.01.T01:intron 50.0%
! GATTTCCTTAAGGGCTGGCA+AGG + Chr8:8622613-8622632 None:intergenic 50.0%
! GGGGAGGGGAGGAATTTTAA+CGG - Chr8:8620338-8620357 MsG0880042433.01.T01:intron 50.0%
! GTGTTTGGTTCACAAGGGGA+GGG - Chr8:8620395-8620414 MsG0880042433.01.T01:intron 50.0%
! TGTGTTTGGTTCACAAGGGG+AGG - Chr8:8620394-8620413 MsG0880042433.01.T01:intron 50.0%
! TGTTTGGTTCACAAGGGGAG+GGG - Chr8:8620396-8620415 MsG0880042433.01.T01:intron 50.0%
! TTTCCTTAAGGGCTGGCAAG+GGG + Chr8:8622611-8622630 None:intergenic 50.0%
!! GAGGAATTTTAACGGAGGGG+AGG - Chr8:8620346-8620365 MsG0880042433.01.T01:intron 50.0%
!! GAGGGGAGGAATTTTAACGG+AGG - Chr8:8620341-8620360 MsG0880042433.01.T01:intron 50.0%
!! GCTCCCAAAGTTGGTAACTG+TGG + Chr8:8621656-8621675 None:intergenic 50.0%
!! GGAATTTTAACGGAGGGGAG+GGG - Chr8:8620348-8620367 MsG0880042433.01.T01:intron 50.0%
!! GGGGAGGAATTTTAACGGAG+GGG - Chr8:8620343-8620362 MsG0880042433.01.T01:intron 50.0%
!! TGGAAAGGGACTGGTTGGAA+AGG - Chr8:8621607-8621626 MsG0880042433.01.T01:CDS 50.0%
!!! TTCGAGAGTTTTGGAGGGGA+GGG + Chr8:8620813-8620832 None:intergenic 50.0%
AAGGAAATCCTCCGCACCGA+TGG - Chr8:8622624-8622643 MsG0880042433.01.T01:intron 55.0%
AGAATTAGGAGGGGAGGGGA+GGG - Chr8:8620318-8620337 MsG0880042433.01.T01:intron 55.0%
CACAAGACGAAGGCCATGAG+GGG + Chr8:8624352-8624371 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + Chr8:8619758-8619777 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - Chr8:8619755-8619774 MsG0880042433.01.T01:CDS 55.0%
CGGAGGATTTCCTTAAGGGC+TGG + Chr8:8622618-8622637 None:intergenic 55.0%
CGGTGCGGAGGATTTCCTTA+AGG + Chr8:8622623-8622642 None:intergenic 55.0%
CTACCACTTCTAACCCTGCG+CGG + Chr8:8622238-8622257 None:intergenic 55.0%
CTTCAAGGGTCACACGGACA+AGG + Chr8:8621775-8621794 None:intergenic 55.0%
CTTTCGACACCTTCGTGTGC+AGG + Chr8:8623489-8623508 None:intergenic 55.0%
GAGGATCCATCTTCCCCTCA+TGG - Chr8:8624336-8624355 MsG0880042433.01.T01:intron 55.0%
GATGGGTGCTAGATCCTCCA+AGG + Chr8:8622210-8622229 None:intergenic 55.0%
GCCCTTGTTCGTCCAATCCT+TGG - Chr8:8622190-8622209 MsG0880042433.01.T01:intron 55.0%
GCTGCCGGAAATTTGATCGG+AGG - Chr8:8619472-8619491 MsG0880042433.01.T01:exon 55.0%
GGAGGAGTCACCAGCATTGT+TGG - Chr8:8619490-8619509 MsG0880042433.01.T01:CDS 55.0%
GGAGTCACCAGCATTGTTGG+TGG - Chr8:8619493-8619512 MsG0880042433.01.T01:CDS 55.0%
GGTTCGAGAATTAGGAGGGG+AGG - Chr8:8620312-8620331 MsG0880042433.01.T01:intron 55.0%
TACCACTTCTAACCCTGCGC+GGG + Chr8:8622237-8622256 None:intergenic 55.0%
TATTCCGGAGCCAGGAACTC+CGG - Chr8:8624701-8624720 MsG0880042433.01.T01:intron 55.0%
TATTCCGGAGTTCCTGGCTC+CGG + Chr8:8624708-8624727 None:intergenic 55.0%
TCAAATTTCCGGCAGCGTCG+AGG + Chr8:8619468-8619487 None:intergenic 55.0%
! GAAGTGCGCGGACTTTTCGA+AGG - Chr8:8622546-8622565 MsG0880042433.01.T01:intron 55.0%
! GCAAGTGGAAAGGGACTGGT+TGG - Chr8:8621602-8621621 MsG0880042433.01.T01:CDS 55.0%
! GTAGGGCAATTGCACTGGTC+CGG + Chr8:8624988-8625007 None:intergenic 55.0%
! TTTTAACGGAGGGGAGGGGA+GGG - Chr8:8620352-8620371 MsG0880042433.01.T01:intron 55.0%
!! ATTTTAACGGAGGGGAGGGG+AGG - Chr8:8620351-8620370 MsG0880042433.01.T01:intron 55.0%
!!! GTTCGAGAGTTTTGGAGGGG+AGG + Chr8:8620814-8620833 None:intergenic 55.0%
!!! TCGAGAGTTTTGGAGGGGAG+GGG + Chr8:8620812-8620831 None:intergenic 55.0%
ACTTCTAACCCTGCGCGGGT+AGG + Chr8:8622233-8622252 None:intergenic 60.0%
CGAAGGCCATGAGGGGAAGA+TGG + Chr8:8624345-8624364 None:intergenic 60.0%
CTTCTAACCCTGCGCGGGTA+GGG + Chr8:8622232-8622251 None:intergenic 60.0%
CTTGTTCACCATCGGTGCGG+AGG + Chr8:8622635-8622654 None:intergenic 60.0%
GAATTAGGAGGGGAGGGGAG+GGG - Chr8:8620319-8620338 MsG0880042433.01.T01:intron 60.0%
GAGAATTAGGAGGGGAGGGG+AGG - Chr8:8620317-8620336 MsG0880042433.01.T01:intron 60.0%
GAGGACACCGCCTTTACCGA+TGG + Chr8:8619449-8619468 None:intergenic 60.0%
TACCCGCGCAGGGTTAGAAG+TGG - Chr8:8622232-8622251 MsG0880042433.01.T01:intron 60.0%
TGGTTCACAAGGGGAGGGGA+GGG - Chr8:8620400-8620419 MsG0880042433.01.T01:intron 60.0%
TTGGTTCACAAGGGGAGGGG+AGG - Chr8:8620399-8620418 MsG0880042433.01.T01:intron 60.0%
TTTAACGGAGGGGAGGGGAG+GGG - Chr8:8620353-8620372 MsG0880042433.01.T01:intron 60.0%
! GCAATTGCACTGGTCCGGTG+CGG + Chr8:8624983-8625002 None:intergenic 60.0%
! GGGCTTGTTCACCATCGGTG+CGG + Chr8:8622638-8622657 None:intergenic 60.0%
! GTGCGCGGACTTTTCGAAGG+TGG - Chr8:8622549-8622568 MsG0880042433.01.T01:intron 60.0%
AACCCTGCGCGGGTAGGGAT+GGG + Chr8:8622227-8622246 None:intergenic 65.0%
CAGCCCCTTGCCAGCCCTTA+AGG - Chr8:8622605-8622624 MsG0880042433.01.T01:intron 65.0%
TAACCCTGCGCGGGTAGGGA+TGG + Chr8:8622228-8622247 None:intergenic 65.0%
! GGGCTGGCAAGGGGCTGATT+TGG + Chr8:8622602-8622621 None:intergenic 65.0%
!! ACAAGGGCGTCGCCACGATC+TGG + Chr8:8622178-8622197 None:intergenic 65.0%
CACCCATCCCTACCCGCGCA+GGG - Chr8:8622222-8622241 MsG0880042433.01.T01:intron 70.0%
TAGGAGGGGAGGGGAGGGGA+GGG - Chr8:8620323-8620342 MsG0880042433.01.T01:intron 70.0%
TTAGGAGGGGAGGGGAGGGG+AGG - Chr8:8620322-8620341 MsG0880042433.01.T01:intron 70.0%
AACGGAGGGGAGGGGAGGGG+AGG - Chr8:8620356-8620375 MsG0880042433.01.T01:intron 75.0%
AGGAGGGGAGGGGAGGGGAG+GGG - Chr8:8620324-8620343 MsG0880042433.01.T01:intron 75.0%
GCACCCATCCCTACCCGCGC+AGG - Chr8:8622221-8622240 MsG0880042433.01.T01:intron 75.0%
GGCGGTGTCCTCGACGCTGC+CGG - Chr8:8619457-8619476 MsG0880042433.01.T01:three_prime_UTR 75.0%
! AGGGGAGGGGAGGGGAGGGG+AGG - Chr8:8620327-8620346 MsG0880042433.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr8 gene 8619287 8625268 8619287 ID=MsG0880042433.01;Name=MsG0880042433.01
Chr8 mRNA 8619287 8625268 8619287 ID=MsG0880042433.01.T01;Parent=MsG0880042433.01;Name=MsG0880042433.01.T01;_AED=0.41;_eAED=0.41;_QI=71|1|1|1|1|1|9|192|864
Chr8 exon 8619287 8620232 8619287 ID=MsG0880042433.01.T01:exon:4029;Parent=MsG0880042433.01.T01
Chr8 exon 8620551 8620814 8620551 ID=MsG0880042433.01.T01:exon:4028;Parent=MsG0880042433.01.T01
Chr8 exon 8620975 8621276 8620975 ID=MsG0880042433.01.T01:exon:4027;Parent=MsG0880042433.01.T01
Chr8 exon 8621371 8621478 8621371 ID=MsG0880042433.01.T01:exon:4026;Parent=MsG0880042433.01.T01
Chr8 exon 8621577 8621662 8621577 ID=MsG0880042433.01.T01:exon:4025;Parent=MsG0880042433.01.T01
Chr8 exon 8621868 8622188 8621868 ID=MsG0880042433.01.T01:exon:4024;Parent=MsG0880042433.01.T01
Chr8 exon 8622281 8622521 8622281 ID=MsG0880042433.01.T01:exon:4023;Parent=MsG0880042433.01.T01
Chr8 exon 8622666 8622952 8622666 ID=MsG0880042433.01.T01:exon:4022;Parent=MsG0880042433.01.T01
Chr8 exon 8624966 8625268 8624966 ID=MsG0880042433.01.T01:exon:4021;Parent=MsG0880042433.01.T01
Chr8 five_prime_UTR 8625198 8625268 8625198 ID=MsG0880042433.01.T01:five_prime_utr;Parent=MsG0880042433.01.T01
Chr8 CDS 8624966 8625197 8624966 ID=MsG0880042433.01.T01:cds;Parent=MsG0880042433.01.T01
Chr8 CDS 8622666 8622952 8622666 ID=MsG0880042433.01.T01:cds;Parent=MsG0880042433.01.T01
Chr8 CDS 8622281 8622521 8622281 ID=MsG0880042433.01.T01:cds;Parent=MsG0880042433.01.T01
Chr8 CDS 8621868 8622188 8621868 ID=MsG0880042433.01.T01:cds;Parent=MsG0880042433.01.T01
Chr8 CDS 8621577 8621662 8621577 ID=MsG0880042433.01.T01:cds;Parent=MsG0880042433.01.T01
Chr8 CDS 8621371 8621478 8621371 ID=MsG0880042433.01.T01:cds;Parent=MsG0880042433.01.T01
Chr8 CDS 8620975 8621276 8620975 ID=MsG0880042433.01.T01:cds;Parent=MsG0880042433.01.T01
Chr8 CDS 8620551 8620814 8620551 ID=MsG0880042433.01.T01:cds;Parent=MsG0880042433.01.T01
Chr8 CDS 8619479 8620232 8619479 ID=MsG0880042433.01.T01:cds;Parent=MsG0880042433.01.T01
Chr8 three_prime_UTR 8619287 8619478 8619287 ID=MsG0880042433.01.T01:three_prime_utr;Parent=MsG0880042433.01.T01
Gene Sequence

>MsG0880042433.01.T01

ATGTTGGGCATCTTTGACAAGGGCCAAAAAATCAAGGGCACTGTGGTGTTGATGCCCAAAAATGTTTTGGACTTCAACGCCATAACGTCCATCGGTAAAGGCGGTGTCCTCGACGCTGCCGGAAATTTGATCGGAGGAGTCACCAGCATTGTTGGTGGAGTTGTTGATACTGCCACTGCCTTCTTAGGCCGTAATGTCTCTATGCAGTTGATTAGTGCTACAAAGACTGATGCAAGTGGAAAGGGACTGGTTGGAAAGGAAACATTTTTGAGCAAACATCTACCACAGTTACCAACTTTGGGAGCAAGACAAGATGCATTCAGTATTTTCTTTGAATATGATGCTAATTTTGGAATCCCTGGAGCATTTTACATAAGAAATTATACACAAGCTGAGTTCTTCCTTGTCCGTGTGACCCTTGAAGATATTCCTAACCGTGGAAGTGTTCAATTTGATTGTAACTCATGGGTTTACAACTTCAAAAGCTACAAAAACAATCGCATCTTCTTCACCAATGATGCGTATCTTCCAAGTCAAACACCAGCTCCATTAAATCACTTTAGAGAAGAAGAGTTGCAGAATCTAAGAGGAGATGGAACTGGAGAACGCAAAGAATGGGATAGGATATACGATTATGATGTTTATAATGATCTCGGAAATCCAGATCGTGGCGACGCCCTTGTTCGTCCAATCCTTGGAGGATCTAGCACCCATCCCTACCCGCGCAGGGTTAGAAGTGGTAGAAAACCAACTAGAAAAGATCCTAAGAGTGAGAAACCGGGTGTGATTTATGTTCCAAGAGATGAAAATTTTGGTCACTTGAAGTCATCAGACTTCCTTATGTATGGAATAAAGTCATTGTCACAAGACGTCTTGCCTTTGTTACAATCTGTAATTTTTGATCTGAATTTCACCCCGAATGAGTTCGATAGCTTCGATGAAGTGCGCGGACTTTTCGAAGGTGGAATTAAGCTTCCAACAGATATAATTAGCCAAATCAGCCCCTTGCCAGCCCTTAAGGAAATCCTCCGCACCGATGGTGAACAAGCCCTTAAGTTTCCACCACCTCAAGTAATTAGAGTTAGCAAGTCTGCATGGAATACTGATGAAGAATTTGGAAGAGAGATGCTTGCTGGTGTAAATCCTAATGTGATTCGTCTTCTTCAAGAGTTCCCACCAAAAAGCACATTAGATGCCACTGTCTATGGTGATCAAAACAGTACAATAACAAAAGAACACTTAGAGACTAATCTTGGTGATATCACAGTAGAAGAGGCACTTAATGGAAAGAGATTATTCCTCTTAGATTACCATGATGCATTCATGCCATATTTGGAGAGGATAAATTTAAGTGCAAAAGCTTACGCTACAAGGACAATCTTGTTCTTGCAAGATGATGGGACTTTGAAGCCATTAGCCATCGAATTAAGTTTGCCACACTCAAATGGGGTCCAATATGGTGCTGAAAGCAAAGTATTCTTGCCTGCACACGAAGGTGTCGAAAGTACAATTTGGATGTTGGCAAAGGCTCATGTCATTGTAAATGACTCATGCTATCATCAACTCATGAGCCATTGGTTGAATACTCATGCAGTGATGGAACCATTCATCATAGCAACAAATAGACATCTAAGTGTGCTTCACCCAATTTATAAGCTTTTATTCCCCCATTACCGTGACACAATAAATATCAATGGACTTGCTCGACAAGCTCTCATCAATGCTGACGGCATTATAGAGCAAACATTTTGTCCGGGACCAAATTCCATTGAGATTTCTTCTGCAGTTTACAAGAATTGGGTTTTCACTGATCAAGCATTACCAGCTGATCTTATCAAGAGAGGATTAGCTGTTGAGGATCCATCTTCCCCTCATGGCCTTCGTCTTGTGATAGAGGACTACCCTTATGCCGTTGACGGACTAGAAATATGGGATGCTATTAAGGCATGGGTCCAAGACTATGTATCCTTATACTACCCAACAGATGAGGCAGTACAAATAGACACTGAAATTCAGAAATGGTGGAAGGAAGCTGTAGAAAAGGGTCATGGTGACTTGAAAGACAAGCCATGGTGGCCTAAGATGCAAACTGTTCAAGACTTGGTTCAATCTTGCTCCATTATTATATGGACAGCTTCTGCTCTTCATGCAGCTGTTAACTTCGGACAATATCCTTATGGAGGATATATCCTGAACCGTCCAACAATTAGTAGAAGATTTATTCCGGAGCCAGGAACTCCGGAATACGATGAGATGGTGAAAAGTCCTCAAAAGGCATATTTGAGAACTATTACACCAAAGTACCAAACCCTTGTTGATCTTTCTGTGATTGAGATATTGTCAAGACATGCGTCCGATGAAGTGTATCTTGGAGAGAATAATAACAAGTTTTGGACATCTGATACAAGGGCAGTTCAAGCCTTCCAAAAGTTTGGAAGCAAACTAGCTGAAATTGAAGGGAAAATTACCAAGAGGAACAATGAATCTAGTTTGAGAAACCGCACCGGACCAGTGCAATTGCCCTACACTTTGCTCCTTCGTTCGAGTGAAGAAGGTTTAACATTCAGAGGAATTCCCAACAGTATCTCTATTTAG
Protein sequence

>MsG0880042433.01.T01

MLGIFDKGQKIKGTVVLMPKNVLDFNAITSIGKGGVLDAAGNLIGGVTSIVGGVVDTATAFLGRNVSMQLISATKTDASGKGLVGKETFLSKHLPQLPTLGARQDAFSIFFEYDANFGIPGAFYIRNYTQAEFFLVRVTLEDIPNRGSVQFDCNSWVYNFKSYKNNRIFFTNDAYLPSQTPAPLNHFREEELQNLRGDGTGERKEWDRIYDYDVYNDLGNPDRGDALVRPILGGSSTHPYPRRVRSGRKPTRKDPKSEKPGVIYVPRDENFGHLKSSDFLMYGIKSLSQDVLPLLQSVIFDLNFTPNEFDSFDEVRGLFEGGIKLPTDIISQISPLPALKEILRTDGEQALKFPPPQVIRVSKSAWNTDEEFGREMLAGVNPNVIRLLQEFPPKSTLDATVYGDQNSTITKEHLETNLGDITVEEALNGKRLFLLDYHDAFMPYLERINLSAKAYATRTILFLQDDGTLKPLAIELSLPHSNGVQYGAESKVFLPAHEGVESTIWMLAKAHVIVNDSCYHQLMSHWLNTHAVMEPFIIATNRHLSVLHPIYKLLFPHYRDTININGLARQALINADGIIEQTFCPGPNSIEISSAVYKNWVFTDQALPADLIKRGLAVEDPSSPHGLRLVIEDYPYAVDGLEIWDAIKAWVQDYVSLYYPTDEAVQIDTEIQKWWKEAVEKGHGDLKDKPWWPKMQTVQDLVQSCSIIIWTASALHAAVNFGQYPYGGYILNRPTISRRFIPEPGTPEYDEMVKSPQKAYLRTITPKYQTLVDLSVIEILSRHASDEVYLGENNNKFWTSDTRAVQAFQKFGSKLAEIEGKITKRNNESSLRNRTGPVQLPYTLLLRSSEEGLTFRGIPNSISI*