AlfalfaGEDB | MsG0880042846.01

M. sativa cultivar ZhongmuNo.1 / MsG0880042846.01

KEGG: -
GO: GO:0030246
PFAM: PF00139

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042846.01.T01	AAA61914.1	98.901	273	3	0	1	273	1	273	0	549

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042846.01.T01	Q01806	95.273	275	11	1	1	273	3	277	0	527

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042846.01.T01	Q42411	98.901	273	3	0	1	273	1	273	0.0	549

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180004510.01	MsG0880042846.01	0.806406	8.353535e-50	4.530297e-47
MsG0780041363.01	MsG0880042846.01	0.803892	2.806491e-49	1.426962e-46
MsG0880042433.01	MsG0880042846.01	0.802670	5.024035e-49	2.475595e-46
MsG0880042541.01	MsG0880042846.01	0.813279	2.774368e-51	1.803922e-48
MsG0880042846.01	MsG0880043983.01	0.801293	9.642647e-49	4.588197e-46
MsG0880042846.01	MsG0880043989.01	0.800701	1.273563e-48	5.969633e-46
MsG0680031616.01	MsG0880042846.01	0.818273	2.136135e-52	1.591630e-49
MsG0480023195.01	MsG0880042846.01	0.802687	4.984330e-49	2.457099e-46
MsG0580025822.01	MsG0880042846.01	0.802952	4.395453e-49	2.181413e-46
MsG0380017024.01	MsG0880042846.01	0.809124	2.209374e-50	1.286395e-47
MsG0280009241.01	MsG0880042846.01	0.832431	9.490267e-56	1.060499e-52

PPI

Gene1	Gene2	Type
MsG0880042846.01	MsG0380014272.01	PPI
MsG0880042846.01	MsG0180005082.01	PPI
MsG0880042846.01	MsG0180004091.01	PPI
MsG0880042846.01	MsG0180004091.01	PPI
MsG0880042846.01	MsG0580025592.01	PPI
MsG0880042846.01	MsG0880045216.01	PPI
MsG0880042846.01	MsG0180005059.01	PPI
MsG0880042846.01	MsG0380014748.01	PPI
MsG0880042846.01	MsG0380013593.01	PPI
MsG0880042846.01	MsG0180004091.01	PPI
MsG0880042846.01	MsG0380013595.01	PPI
MsG0580025591.01	MsG0880042846.01	PPI
MsG0880042846.01	MsG0880045217.01	PPI
MsG0380013595.01	MsG0880042846.01	PPI
MsG0880042846.01	MsG0880045214.01	PPI
MsG0880042846.01	MsG0580025598.01	PPI
MsG0880042846.01	MsG0380014744.01	PPI
MsG0880042846.01	MsG0180005060.01	PPI
MsG0880042846.01	MsG0380014275.01	PPI
MsG0180004091.01	MsG0880042846.01	PPI
MsG0880042846.01	MsG0380013594.01	PPI
MsG0880042846.01	MsG0180005080.01	PPI
MsG0180005060.01	MsG0880042846.01	PPI
MsG0880042846.01	MsG0180004091.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042846.01.T01	MTR_8g023510	95.273	275	11	1	1	273	3	277	0.0	527
MsG0880042846.01.T01	MTR_3g463370	60.142	281	64	5	1	273	1	241	4.03e-102	298
MsG0880042846.01.T01	MTR_4g023810	62.288	236	81	5	22	255	25	254	6.88e-98	288
MsG0880042846.01.T01	MTR_8g068040	38.672	256	142	7	10	255	11	261	1.39e-49	164
MsG0880042846.01.T01	MTR_8g068030	37.308	260	144	7	10	255	11	265	1.32e-47	159
MsG0880042846.01.T01	MTR_5g031100	37.970	266	137	6	17	255	14	278	2.88e-47	159
MsG0880042846.01.T01	MTR_5g031160	38.800	250	133	8	23	255	41	287	6.56e-45	153
MsG0880042846.01.T01	MTR_5g031120	36.704	267	140	7	17	255	14	279	2.53e-43	149
MsG0880042846.01.T01	MTR_3g054170	40.996	261	143	8	1	256	1	255	8.23e-43	147
MsG0880042846.01.T01	MTR_5g031140	37.917	240	133	6	31	255	48	286	1.03e-42	147
MsG0880042846.01.T01	MTR_8g068050	38.314	261	143	9	9	255	17	273	6.53e-42	152
MsG0880042846.01.T01	MTR_3g047140	39.313	262	147	8	7	262	13	268	9.02e-42	145
MsG0880042846.01.T01	MTR_3g054180	41.569	255	134	8	10	256	14	261	1.64e-41	144
MsG0880042846.01.T01	MTR_5g031090	37.603	242	133	8	31	255	35	275	1.76e-39	139
MsG0880042846.01.T01	MTR_5g031030	37.903	248	137	9	22	255	30	274	8.84e-39	137
MsG0880042846.01.T01	MTR_3g027280	39.526	253	132	10	12	251	18	262	6.31e-38	135
MsG0880042846.01.T01	MTR_8g067980	41.176	238	119	12	31	253	26	257	3.87e-37	132
MsG0880042846.01.T01	MTR_1g090973	37.269	271	154	11	6	268	11	273	1.01e-36	131
MsG0880042846.01.T01	MTR_0684s0020	38.060	268	151	9	10	268	15	276	6.17e-36	129
MsG0880042846.01.T01	MTR_0163s0020	38.060	268	151	9	10	268	16	277	6.66e-36	129
MsG0880042846.01.T01	MTR_4g093080	35.484	279	153	11	7	270	8	274	1.61e-35	135
MsG0880042846.01.T01	MTR_4g093110	35.115	262	145	9	6	255	16	264	4.73e-34	130
MsG0880042846.01.T01	MTR_1g090943	39.147	258	141	13	6	255	11	260	9.95e-34	124
MsG0880042846.01.T01	MTR_4g093140	35.227	264	146	10	6	257	16	266	1.61e-33	129
MsG0880042846.01.T01	MTR_1g090957	36.508	252	129	10	12	251	18	250	3.99e-33	122
MsG0880042846.01.T01	MTR_8g067940	33.582	268	156	8	9	255	15	281	1.11e-32	121
MsG0880042846.01.T01	MTR_3g054200	37.302	252	147	8	10	256	10	255	1.70e-32	120
MsG0880042846.01.T01	MTR_8g067990	37.247	247	131	13	31	260	26	265	9.86e-32	118
MsG0880042846.01.T01	MTR_4g093070	32.616	279	152	10	2	257	3	268	1.06e-30	120
MsG0880042846.01.T01	MTR_8g067930	33.212	274	169	7	1	265	1	269	4.74e-30	119
MsG0880042846.01.T01	MTR_8g067690	33.906	233	144	5	32	255	63	294	8.33e-30	118
MsG0880042846.01.T01	MTR_8g067720	31.227	269	172	6	3	263	2	265	2.07e-29	117
MsG0880042846.01.T01	MTR_8g067630	39.720	214	118	8	32	236	33	244	5.69e-29	115
MsG0880042846.01.T01	MTR_1g090930	36.694	248	131	10	17	250	23	258	1.08e-27	108
MsG0880042846.01.T01	MTR_7g115740	31.343	268	161	10	18	269	14	274	8.42e-26	106
MsG0880042846.01.T01	MTR_8g067735	32.479	234	149	5	32	256	46	279	8.76e-26	106
MsG0880042846.01.T01	MTR_1g014240	32.218	239	146	8	32	256	40	276	1.13e-25	106
MsG0880042846.01.T01	MTR_8g067960	33.929	224	130	9	44	255	24	241	9.60e-25	99.4
MsG0880042846.01.T01	MTR_1g090937	33.333	252	145	10	15	255	21	260	1.64e-24	99.4
MsG0880042846.01.T01	MTR_4g093040	35.106	188	111	6	67	244	73	259	2.91e-23	99.4
MsG0880042846.01.T01	MTR_7g116130	34.061	229	129	9	43	255	39	261	3.62e-23	99.0
MsG0880042846.01.T01	MTR_1g090960	33.080	263	122	12	6	256	11	231	5.50e-22	92.0
MsG0880042846.01.T01	MTR_4g093040	35.393	178	104	6	77	244	1	177	6.56e-22	95.5
MsG0880042846.01.T01	MTR_1g048360	33.333	210	120	8	55	253	60	260	1.67e-21	94.4
MsG0880042846.01.T01	MTR_7g062940	31.621	253	153	8	16	251	6	255	3.04e-21	93.6
MsG0880042846.01.T01	MTR_7g062950	32.444	225	135	5	43	251	32	255	1.38e-19	88.6
MsG0880042846.01.T01	MTR_4g093050	32.692	260	143	12	15	251	12	262	4.96e-19	87.0
MsG0880042846.01.T01	MTR_7g063030	31.349	252	151	7	16	251	15	260	7.76e-19	86.3
MsG0880042846.01.T01	MTR_7g063030	32.889	225	133	6	43	251	32	254	7.95e-19	86.3
MsG0880042846.01.T01	MTR_5g025020	32.547	212	123	8	66	262	85	291	5.64e-18	84.0
MsG0880042846.01.T01	MTR_1g052275	30.888	259	155	7	14	251	3	258	6.30e-18	83.6
MsG0880042846.01.T01	MTR_5g077100	33.333	192	112	5	69	253	68	250	1.28e-17	82.8
MsG0880042846.01.T01	MTR_7g062890	31.102	254	154	8	16	251	6	256	1.45e-17	82.8
MsG0880042846.01.T01	MTR_7g062770	30.859	256	156	6	16	251	6	260	1.47e-17	82.8
MsG0880042846.01.T01	MTR_7g062700	31.907	257	150	8	16	251	6	258	3.66e-17	81.6
MsG0880042846.01.T01	MTR_5g035910	30.451	266	157	10	9	251	3	263	6.61e-17	80.9
MsG0880042846.01.T01	MTR_5g068770	31.048	248	137	12	32	253	38	277	1.47e-16	79.7
MsG0880042846.01.T01	MTR_4g056320	28.736	261	125	10	10	256	17	230	2.03e-16	77.4
MsG0880042846.01.T01	MTR_7g062750	29.688	256	157	7	16	251	6	258	2.12e-16	79.3
MsG0880042846.01.T01	MTR_7g063010	28.235	255	165	6	13	251	4	256	3.54e-15	75.5
MsG0880042846.01.T01	MTR_3g068025	30.000	260	159	7	14	251	9	267	3.75e-14	72.4
MsG0880042846.01.T01	MTR_7g062920	30.078	256	156	7	16	251	6	258	3.83e-14	72.4
MsG0880042846.01.T01	MTR_8g068050	34.091	132	79	4	9	134	17	146	7.17e-14	71.6
MsG0880042846.01.T01	MTR_7g062660	31.621	253	153	7	16	251	6	255	1.61e-13	70.5
MsG0880042846.01.T01	MTR_2g013720	30.741	270	151	13	5	251	6	262	1.69e-13	70.5
MsG0880042846.01.T01	MTR_7g062900	28.571	224	139	5	43	251	34	251	1.93e-13	70.5
MsG0880042846.01.T01	MTR_7g062990	27.451	255	167	5	14	251	6	259	2.23e-12	67.4
MsG0880042846.01.T01	MTR_7g062680	29.694	229	140	5	43	251	32	259	3.56e-12	66.6
MsG0880042846.01.T01	MTR_1g099260	26.423	246	150	9	29	253	14	249	7.71e-12	65.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880042846.01.T01	AT5G65600	34.222	225	136	7	32	244	38	262	6.19e-25	104
MsG0880042846.01.T01	AT5G10530	33.205	259	157	9	11	258	4	257	1.91e-24	102
MsG0880042846.01.T01	AT4G02420	31.955	266	154	10	6	251	2	260	6.40e-23	98.6
MsG0880042846.01.T01	AT4G02410	32.099	243	148	6	25	251	22	263	7.69e-23	98.2
MsG0880042846.01.T01	AT2G37710	31.556	225	137	6	43	251	38	261	1.00e-22	97.8
MsG0880042846.01.T01	AT5G01540	32.400	250	141	9	30	253	31	278	3.08e-22	96.7
MsG0880042846.01.T01	AT2G29250	31.022	274	153	10	5	254	3	264	1.24e-21	94.7
MsG0880042846.01.T01	AT5G01550	30.249	281	163	10	2	253	14	290	5.17e-20	90.1
MsG0880042846.01.T01	AT4G29050	33.186	226	123	8	48	251	39	258	6.41e-20	89.7
MsG0880042846.01.T01	AT4G29050	33.186	226	123	8	48	251	53	272	6.78e-20	89.7
MsG0880042846.01.T01	AT3G55550	30.290	241	153	4	26	252	20	259	1.04e-19	89.0
MsG0880042846.01.T01	AT5G01560	30.677	251	139	10	32	253	30	274	7.88e-19	86.7
MsG0880042846.01.T01	AT3G53810	30.081	246	153	7	24	252	19	262	1.19e-18	85.9
MsG0880042846.01.T01	AT5G03140	31.373	204	126	6	56	249	58	257	1.24e-17	82.8
MsG0880042846.01.T01	AT3G08870	30.769	247	144	10	32	253	57	301	1.60e-17	82.8
MsG0880042846.01.T01	AT3G08870	30.769	247	144	10	32	253	36	280	1.89e-17	82.4
MsG0880042846.01.T01	AT5G60280	29.183	257	157	9	12	251	8	256	5.49e-17	80.9
MsG0880042846.01.T01	AT2G29220	30.370	270	151	11	11	254	6	264	8.59e-17	80.5
MsG0880042846.01.T01	AT3G15356	28.689	244	142	8	40	252	28	270	1.42e-16	77.8
MsG0880042846.01.T01	AT5G55830	30.189	265	148	12	10	253	18	266	1.90e-16	79.3
MsG0880042846.01.T01	AT5G60310	29.719	249	146	9	23	251	18	257	8.77e-16	77.4
MsG0880042846.01.T01	AT5G06740	32.000	200	119	9	64	253	78	270	1.04e-15	77.4
MsG0880042846.01.T01	AT5G06740	32.000	200	119	9	64	253	66	258	1.14e-15	77.0
MsG0880042846.01.T01	AT3G16530	27.007	274	165	10	10	252	1	270	1.75e-15	75.1
MsG0880042846.01.T01	AT3G45430	31.679	262	137	13	26	260	22	268	3.36e-15	75.9
MsG0880042846.01.T01	AT3G45430	31.679	262	137	13	26	260	22	268	3.36e-15	75.9
MsG0880042846.01.T01	AT3G45430	31.679	262	137	13	26	260	22	268	3.36e-15	75.9
MsG0880042846.01.T01	AT5G60300	30.453	243	139	10	30	251	25	258	1.63e-14	73.6
MsG0880042846.01.T01	AT5G60300	30.453	243	139	10	30	251	25	258	1.63e-14	73.6
MsG0880042846.01.T01	AT5G60300	30.453	243	139	10	30	251	25	258	1.75e-14	73.6
MsG0880042846.01.T01	AT4G04960	31.687	243	143	9	25	249	16	253	4.04e-14	72.4
MsG0880042846.01.T01	AT4G04960	31.687	243	143	9	25	249	16	253	6.98e-14	72.0
MsG0880042846.01.T01	AT3G45410	27.612	268	162	12	3	251	2	256	2.31e-13	70.1
MsG0880042846.01.T01	AT3G53380	32.800	250	148	10	10	249	5	244	1.16e-12	68.2
MsG0880042846.01.T01	AT5G03350	27.615	239	142	8	44	252	31	268	1.76e-12	66.2
MsG0880042846.01.T01	AT3G45330	28.400	250	161	7	25	258	23	270	2.21e-12	67.4
MsG0880042846.01.T01	AT3G59700	25.641	234	155	7	34	249	17	249	2.66e-12	67.0
MsG0880042846.01.T01	AT2G43700	29.796	245	145	8	29	253	14	251	2.80e-12	67.0
MsG0880042846.01.T01	AT1G70110	27.273	231	139	10	43	251	33	256	2.84e-12	67.0
MsG0880042846.01.T01	AT5G42120	29.658	263	152	10	13	253	7	258	3.53e-12	66.6
MsG0880042846.01.T01	AT1G07460	29.787	235	135	8	41	254	38	263	5.29e-12	65.5
MsG0880042846.01.T01	AT3G45440	29.412	255	152	10	16	251	64	309	2.21e-11	64.3
MsG0880042846.01.T01	AT3G45440	29.412	255	152	10	16	251	11	256	2.61e-11	63.9
MsG0880042846.01.T01	AT3G45440	29.412	255	152	10	16	251	11	256	2.61e-11	63.9
MsG0880042846.01.T01	AT3G45440	29.412	255	152	10	16	251	11	256	2.61e-11	63.9
MsG0880042846.01.T01	AT5G60320	27.907	258	160	12	16	251	9	262	2.69e-11	63.9

Find 47 sgRNAs with CRISPR-Local

Find 57 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTGGAAGATTAGATTCTTT+TGG	0.238719	8:+14833234	None:intergenic
CAGAACATGATATTCGTTAT+TGG	0.241480	8:-14832629	MsG0880042846.01.T01:CDS
ATTCTGCTCCTATTCATATC+TGG	0.244024	8:-14833136	MsG0880042846.01.T01:CDS
CCAATATGTCTATTTATCTT+TGG	0.248398	8:+14832882	None:intergenic
CTTCATCTTGTTATTCAATA+AGG	0.258451	8:-14833306	MsG0880042846.01.T01:CDS
AAGTACTACACCATGGGTTT+TGG	0.317266	8:-14832832	MsG0880042846.01.T01:CDS
CTTCCCTGTTGAGGTAGTTA+TGG	0.356339	8:+14833205	None:intergenic
TTGCTATCCCAGATATGAAT+AGG	0.375848	8:+14833128	None:intergenic
CATATCTGGGATAGCAAAAC+AGG	0.382485	8:-14833122	MsG0880042846.01.T01:CDS
CCAAAGATAAATAGACATAT+TGG	0.401782	8:-14832882	MsG0880042846.01.T01:CDS
TCAGCAACATTGCTACTATA+AGG	0.406774	8:+14833053	None:intergenic
ATTGGTCGTGCAGGATTTCT+CGG	0.415877	8:-14832984	MsG0880042846.01.T01:CDS
TCACTAAGGATATAACTATC+AGG	0.422347	8:+14832726	None:intergenic
TAGCAATGTTGCTGATGGTT+TGG	0.438836	8:-14833045	MsG0880042846.01.T01:CDS
TAACAAGATGAAGACTGTTA+AGG	0.442595	8:+14833316	None:intergenic
AAGGCAGTCAAGAACTCTAT+TGG	0.450440	8:-14833170	MsG0880042846.01.T01:CDS
AATGTTGTGATAAGGTTTGA+TGG	0.451394	8:-14832792	MsG0880042846.01.T01:CDS
AATGCCATAACTACCTCAAC+AGG	0.458397	8:-14833209	MsG0880042846.01.T01:CDS
TTCTGCTCCTATTCATATCT+GGG	0.459119	8:-14833135	MsG0880042846.01.T01:CDS
GAGAGGCTAATGTTGTGATA+AGG	0.465611	8:-14832800	MsG0880042846.01.T01:CDS
GCTAAACTTTGTGATGGTAA+AGG	0.469149	8:+14833262	None:intergenic
GCTACTATAAGGAGCAGTTA+TGG	0.489122	8:+14833064	None:intergenic
AATAGAGTTCTTGACTGCCT+TGG	0.497569	8:+14833172	None:intergenic
ATATTGTTCCTGAGTGGGTA+AGG	0.498309	8:-14832686	MsG0880042846.01.T01:CDS
CCACAAAACATTGGTCGTGC+AGG	0.505853	8:-14832993	MsG0880042846.01.T01:CDS
TATAGTAGCAATGTTGCTGA+TGG	0.518302	8:-14833050	MsG0880042846.01.T01:CDS
TGAAAGATATTGTTCCTGAG+TGG	0.520340	8:-14832692	MsG0880042846.01.T01:CDS
GAAAGATATTGTTCCTGAGT+GGG	0.522902	8:-14832691	MsG0880042846.01.T01:CDS
ATATAACTATCAGGAAGTCC+TGG	0.527887	8:+14832735	None:intergenic
ATCGGTTTCTCAGCAGCCAC+TGG	0.531685	8:-14832663	MsG0880042846.01.T01:CDS
GTCAATAAGTACTACACCAT+GGG	0.541013	8:-14832838	MsG0880042846.01.T01:CDS
GATGAAGACTGTTAAGGAGA+TGG	0.541381	8:+14833322	None:intergenic
GTTCCTGAGTGGGTAAGGAT+CGG	0.550149	8:-14832681	MsG0880042846.01.T01:CDS
AGGTAGTTATGGCATTGCCT+TGG	0.557576	8:+14833216	None:intergenic
TTCTGCAAATTCTGCACCAG+TGG	0.566800	8:+14832647	None:intergenic
AAGTTGTAACTTCCCTGTTG+AGG	0.568898	8:+14833196	None:intergenic
CAAAAGAATCTAATCTTCCA+AGG	0.573374	8:-14833233	MsG0880042846.01.T01:CDS
TCAGGAACAATATCTTTCAA+AGG	0.574670	8:+14832696	None:intergenic
AAACCGATCCTTACCCACTC+AGG	0.577788	8:+14832678	None:intergenic
GTCTTGGCTAAACTTTGTGA+TGG	0.583455	8:+14833256	None:intergenic
TCAAAGGCACAACATCACTA+AGG	0.583560	8:+14832712	None:intergenic
ATAAGGAGCAGTTATGGCAA+AGG	0.621792	8:+14833070	None:intergenic
GATACTCAGCCACAAAACAT+TGG	0.626388	8:-14833002	MsG0880042846.01.T01:CDS
AGTCAATAAGTACTACACCA+TGG	0.664426	8:-14832839	MsG0880042846.01.T01:CDS
AGGGAAGTTACAACTTACCA+AGG	0.684795	8:-14833189	MsG0880042846.01.T01:CDS
GGATAGCAAAACAGGAGACG+TGG	0.685503	8:-14833114	MsG0880042846.01.T01:CDS
ATGCCATAACTACCTCAACA+GGG	0.753652	8:-14833208	MsG0880042846.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	CCAAAGATAAATAGACATAT+TGG	-	Chr8:14833025-14833044	MsG0880042846.01.T01:CDS	25.0%
!	CCAATATGTCTATTTATCTT+TGG	+	Chr8:14833028-14833047	None:intergenic	25.0%
!!	AGACACTTTTCATAATACTT+GGG	-	Chr8:14833000-14833019	MsG0880042846.01.T01:CDS	25.0%
!!	CATTGTTGTTGTTAAAAACT+AGG	+	Chr8:14833324-14833343	None:intergenic	25.0%
!!	TAGACACTTTTCATAATACT+TGG	-	Chr8:14832999-14833018	MsG0880042846.01.T01:CDS	25.0%
!!!	CTTCATCTTGTTATTCAATA+AGG	-	Chr8:14832601-14832620	MsG0880042846.01.T01:CDS	25.0%
	AATGTTGTGATAAGGTTTGA+TGG	-	Chr8:14833115-14833134	MsG0880042846.01.T01:CDS	30.0%
	CAAAAGAATCTAATCTTCCA+AGG	-	Chr8:14832674-14832693	MsG0880042846.01.T01:CDS	30.0%
	CAGAACATGATATTCGTTAT+TGG	-	Chr8:14833278-14833297	MsG0880042846.01.T01:CDS	30.0%
	TAACAAGATGAAGACTGTTA+AGG	+	Chr8:14832594-14832613	None:intergenic	30.0%
	TCACTAAGGATATAACTATC+AGG	+	Chr8:14833184-14833203	None:intergenic	30.0%
	TCAGGAACAATATCTTTCAA+AGG	+	Chr8:14833214-14833233	None:intergenic	30.0%
!	AGATTAGATTCTTTTGGTCT+TGG	+	Chr8:14832670-14832689	None:intergenic	30.0%
!	CTTGGAAGATTAGATTCTTT+TGG	+	Chr8:14832676-14832695	None:intergenic	30.0%
	AGTCAATAAGTACTACACCA+TGG	-	Chr8:14833068-14833087	MsG0880042846.01.T01:CDS	35.0%
	ATATAACTATCAGGAAGTCC+TGG	+	Chr8:14833175-14833194	None:intergenic	35.0%
	ATTCTGCTCCTATTCATATC+TGG	-	Chr8:14832771-14832790	MsG0880042846.01.T01:CDS	35.0%
	GAAAGATATTGTTCCTGAGT+GGG	-	Chr8:14833216-14833235	MsG0880042846.01.T01:CDS	35.0%
	GCTAAACTTTGTGATGGTAA+AGG	+	Chr8:14832648-14832667	None:intergenic	35.0%
	GTCAATAAGTACTACACCAT+GGG	-	Chr8:14833069-14833088	MsG0880042846.01.T01:CDS	35.0%
	TATAGTAGCAATGTTGCTGA+TGG	-	Chr8:14832857-14832876	MsG0880042846.01.T01:CDS	35.0%
	TCAGCAACATTGCTACTATA+AGG	+	Chr8:14832857-14832876	None:intergenic	35.0%
	TGAAAGATATTGTTCCTGAG+TGG	-	Chr8:14833215-14833234	MsG0880042846.01.T01:CDS	35.0%
	TTCTGCTCCTATTCATATCT+GGG	-	Chr8:14832772-14832791	MsG0880042846.01.T01:CDS	35.0%
	TTGCTATCCCAGATATGAAT+AGG	+	Chr8:14832782-14832801	None:intergenic	35.0%
!!!	AGTGTAGTTTTGTCTTATCC+AGG	-	Chr8:14833154-14833173	MsG0880042846.01.T01:CDS	35.0%
	AAGGCAGTCAAGAACTCTAT+TGG	-	Chr8:14832737-14832756	MsG0880042846.01.T01:CDS	40.0%
	AAGTTGTAACTTCCCTGTTG+AGG	+	Chr8:14832714-14832733	None:intergenic	40.0%
	AATAGAGTTCTTGACTGCCT+TGG	+	Chr8:14832738-14832757	None:intergenic	40.0%
	AATGCCATAACTACCTCAAC+AGG	-	Chr8:14832698-14832717	MsG0880042846.01.T01:CDS	40.0%
	AGGGAAGTTACAACTTACCA+AGG	-	Chr8:14832718-14832737	MsG0880042846.01.T01:CDS	40.0%
	ATAAGGAGCAGTTATGGCAA+AGG	+	Chr8:14832840-14832859	None:intergenic	40.0%
	ATATTGTTCCTGAGTGGGTA+AGG	-	Chr8:14833221-14833240	MsG0880042846.01.T01:CDS	40.0%
	ATGCCATAACTACCTCAACA+GGG	-	Chr8:14832699-14832718	MsG0880042846.01.T01:CDS	40.0%
	GAGAGGCTAATGTTGTGATA+AGG	-	Chr8:14833107-14833126	MsG0880042846.01.T01:CDS	40.0%
	GATACTCAGCCACAAAACAT+TGG	-	Chr8:14832905-14832924	MsG0880042846.01.T01:CDS	40.0%
	GATGAAGACTGTTAAGGAGA+TGG	+	Chr8:14832588-14832607	None:intergenic	40.0%
	GCTACTATAAGGAGCAGTTA+TGG	+	Chr8:14832846-14832865	None:intergenic	40.0%
	GTCTTGGCTAAACTTTGTGA+TGG	+	Chr8:14832654-14832673	None:intergenic	40.0%
	TAGCAATGTTGCTGATGGTT+TGG	-	Chr8:14832862-14832881	MsG0880042846.01.T01:CDS	40.0%
!	AAGTACTACACCATGGGTTT+TGG	-	Chr8:14833075-14833094	MsG0880042846.01.T01:CDS	40.0%
!	CATATCTGGGATAGCAAAAC+AGG	-	Chr8:14832785-14832804	MsG0880042846.01.T01:CDS	40.0%
!	CTTCCATTTTCCAAAACCCA+TGG	+	Chr8:14833088-14833107	None:intergenic	40.0%
!	TCAAAGGCACAACATCACTA+AGG	+	Chr8:14833198-14833217	None:intergenic	40.0%
!	TTTTGTGGCTGAGTATCAAC+TGG	+	Chr8:14832902-14832921	None:intergenic	40.0%
!!!	ACACCATGGGTTTTGGAAAA+TGG	-	Chr8:14833082-14833101	MsG0880042846.01.T01:CDS	40.0%
!!!	GGTTTTGGAAAATGGAAGAG+AGG	-	Chr8:14833090-14833109	MsG0880042846.01.T01:CDS	40.0%
	AGGTAGTTATGGCATTGCCT+TGG	+	Chr8:14832694-14832713	None:intergenic	45.0%
	ATTGGTCGTGCAGGATTTCT+CGG	-	Chr8:14832923-14832942	MsG0880042846.01.T01:CDS	45.0%
	CTTCCCTGTTGAGGTAGTTA+TGG	+	Chr8:14832705-14832724	None:intergenic	45.0%
	TTCTGCAAATTCTGCACCAG+TGG	+	Chr8:14833263-14833282	None:intergenic	45.0%
	AAACCGATCCTTACCCACTC+AGG	+	Chr8:14833232-14833251	None:intergenic	50.0%
	CCACAAAACATTGGTCGTGC+AGG	-	Chr8:14832914-14832933	MsG0880042846.01.T01:CDS	50.0%
	GGATAGCAAAACAGGAGACG+TGG	-	Chr8:14832793-14832812	MsG0880042846.01.T01:CDS	50.0%
	GTTCCTGAGTGGGTAAGGAT+CGG	-	Chr8:14833226-14833245	MsG0880042846.01.T01:CDS	50.0%
!	CCTGCACGACCAATGTTTTG+TGG	+	Chr8:14832917-14832936	None:intergenic	50.0%
!	ATCGGTTTCTCAGCAGCCAC+TGG	-	Chr8:14833244-14833263	MsG0880042846.01.T01:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	14832554	14833375	14832554	ID=MsG0880042846.01;Name=MsG0880042846.01
Chr8	mRNA	14832554	14833375	14832554	ID=MsG0880042846.01.T01;Parent=MsG0880042846.01;Name=MsG0880042846.01.T01;_AED=0.00;_eAED=0.00;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|273
Chr8	exon	14832554	14833375	14832554	ID=MsG0880042846.01.T01:exon:36979;Parent=MsG0880042846.01.T01
Chr8	CDS	14832554	14833375	14832554	ID=MsG0880042846.01.T01:cds;Parent=MsG0880042846.01.T01

Gene Sequence

>MsG0880042846.01.T01

ATGTCTTCTTGCAACTTCTATGTTACTCTATCCATCTCCTTAACAGTCTTCATCTTGTTATTCAATAAGGTGAACTCAACAGAACTCACTTCCTTTACCATCACAAAGTTTAGCCAAGACCAAAAGAATCTAATCTTCCAAGGCAATGCCATAACTACCTCAACAGGGAAGTTACAACTTACCAAGGCAGTCAAGAACTCTATTGGCAGAGCTCTATATTCTGCTCCTATTCATATCTGGGATAGCAAAACAGGAGACGTGGCTAACTTCGAAACACTCTTCACCTTTGCCATAACTGCTCCTTATAGTAGCAATGTTGCTGATGGTTTGGCTTTCTTCATTGCACCAGTTGATACTCAGCCACAAAACATTGGTCGTGCAGGATTTCTCGGAGTTTTCAACAGCGAAAATTACAATAAATCAATACGAACAGTTGCAGTTGAAATAGACACTTTTCATAATACTTGGGATCCAAAGATAAATAGACATATTGGTATCAATGTAAACTCTATTAAGTCAATAAGTACTACACCATGGGTTTTGGAAAATGGAAGAGAGGCTAATGTTGTGATAAGGTTTGATGGTCACACTAATGTGTTAAGTGTAGTTTTGTCTTATCCAGGACTTCCTGATAGTTATATCCTTAGTGATGTTGTGCCTTTGAAAGATATTGTTCCTGAGTGGGTAAGGATCGGTTTCTCAGCAGCCACTGGTGCAGAATTTGCAGAACATGATATTCGTTATTGGTCTTTTCATTCTGAGTTGAGCCTAGTTTTTAACAACAACAATGCTAATGTTTCAAGCTCTGTGCAGACTGCGTAG

Protein sequence

>MsG0880042846.01.T01

MSSCNFYVTLSISLTVFILLFNKVNSTELTSFTITKFSQDQKNLIFQGNAITTSTGKLQLTKAVKNSIGRALYSAPIHIWDSKTGDVANFETLFTFAITAPYSSNVADGLAFFIAPVDTQPQNIGRAGFLGVFNSENYNKSIRTVAVEIDTFHNTWDPKINRHIGINVNSIKSISTTPWVLENGREANVVIRFDGHTNVLSVVLSYPGLPDSYILSDVVPLKDIVPEWVRIGFSAATGAEFAEHDIRYWSFHSELSLVFNNNNANVSSSVQTA*