AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045507.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045507.01.T01 MTR_8g072950 62.274 387 87 6 14 345 15 397 9.03e-120 357
MsG0880045507.01.T01 MTR_8g072950 93.571 140 7 2 209 346 376 515 3.37e-85 268
MsG0880045507.01.T01 MTR_5g024780 83.704 135 21 1 213 346 392 526 1.64e-71 233
MsG0880045507.01.T01 MTR_5g024780 35.279 394 180 14 13 345 6 385 9.70e-50 175
MsG0880045507.01.T01 MTR_4g098530 61.184 152 54 2 196 346 298 445 7.71e-56 189
MsG0880045507.01.T01 MTR_4g098530 25.000 356 216 9 6 345 7 327 1.04e-21 96.3
MsG0880045507.01.T01 MTR_3g076990 39.865 148 64 4 223 345 279 426 3.34e-23 100
MsG0880045507.01.T01 MTR_4g105010 37.908 153 89 3 195 345 281 429 3.80e-23 100
MsG0880045507.01.T01 MTR_4g105010 41.000 100 56 2 224 322 214 311 3.21e-11 64.7
MsG0880045507.01.T01 MTR_5g032910 41.791 134 76 2 214 345 243 376 6.20e-23 99.8
MsG0880045507.01.T01 MTR_2g038380 37.013 154 91 3 195 346 121 270 4.61e-16 78.6
MsG0880045507.01.T01 MTR_4g127120 36.601 153 91 3 195 345 105 253 5.01e-16 78.6
MsG0880045507.01.T01 MTR_7g010010 37.398 123 71 6 222 339 118 239 3.30e-11 65.1
MsG0880045507.01.T01 MTR_3g033240 34.483 116 73 3 221 334 564 678 3.87e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045507.01.T01 AT4G35470 77.778 135 29 1 213 346 361 495 8.87e-66 217
MsG0880045507.01.T01 AT4G35470 35.912 362 184 9 13 345 12 354 1.04e-47 169
MsG0880045507.01.T01 AT4G35470 77.778 135 29 1 213 346 361 495 9.44e-66 217
MsG0880045507.01.T01 AT4G35470 35.912 362 184 9 13 345 12 354 8.78e-48 169
MsG0880045507.01.T01 AT2G17440 71.852 135 37 1 213 346 345 479 2.79e-59 199
MsG0880045507.01.T01 AT2G17440 32.782 363 189 9 13 346 3 339 2.48e-41 151
MsG0880045507.01.T01 AT3G11330 42.105 152 82 3 196 345 277 424 7.58e-27 111
MsG0880045507.01.T01 AT5G05850 43.077 130 72 2 218 345 301 430 3.49e-24 103
MsG0880045507.01.T01 AT3G26500 40.288 139 80 3 209 344 247 385 3.34e-23 100
MsG0880045507.01.T01 AT1G12970 36.242 149 70 3 223 346 240 388 1.72e-19 89.7
MsG0880045507.01.T01 AT4G26050 37.908 153 89 3 195 345 136 284 1.37e-17 83.6
MsG0880045507.01.T01 AT2G19330 39.286 140 82 3 209 345 148 287 4.37e-17 82.0
MsG0880045507.01.T01 AT4G29880 38.562 153 88 3 195 345 132 280 9.60e-15 75.1
MsG0880045507.01.T01 AT2G30105 35.897 117 72 2 230 345 196 310 1.39e-12 68.6

Find 51 sgRNAs with CRISPR-Local

Find 141 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTCAACTTCTTCTGTTCT+TGG 0.170598 8:-60286369 None:intergenic
GTAGCAAAACACAAACTTTC+AGG 0.205801 8:-60288591 None:intergenic
CACTAAAGATGACAGTTATT+TGG 0.224822 8:+60286782 MsG0880045507.01.T01:CDS
TAAAGAAGGTGTTGAGATTA+AGG 0.228709 8:+60286731 MsG0880045507.01.T01:CDS
CCTTGAAATGCTTGAGGAAT+TGG 0.240452 8:+60288683 MsG0880045507.01.T01:CDS
TTAATTTGTCCTACTGCTTC+AGG 0.268479 8:-60288456 None:intergenic
CAGTTATTTGGTGAATAATA+AGG 0.281135 8:+60286794 MsG0880045507.01.T01:CDS
GTCGAATTTGATTAACCTTA+AGG 0.303726 8:+60288536 MsG0880045507.01.T01:CDS
CGAAGAAGAAACAAAATTCT+TGG 0.307910 8:-60286697 None:intergenic
CGACATGGAAGAAGAACCTT+TGG 0.358194 8:-60286475 None:intergenic
AATACTGATGCTTATGCAAT+TGG 0.358231 8:+60286837 MsG0880045507.01.T01:CDS
TCTTCTGTTCTTGGCCTTGC+CGG 0.362912 8:-60286360 None:intergenic
AGGTCATTGCCAAGGTCTAT+TGG 0.374265 8:+60288657 MsG0880045507.01.T01:CDS
ATGAAACATGCATCCACTTC+AGG 0.376444 8:+60286903 MsG0880045507.01.T01:CDS
TCTCGACGATTCTTCTTTGT+CGG 0.384331 8:-60286415 None:intergenic
AGCTTTGAGCCGATTGTAAT+CGG 0.384731 8:-60288430 None:intergenic
CCAATTCCTCAAGCATTTCA+AGG 0.392572 8:-60288683 None:intergenic
TGTTGAGATTAAGGAGAAGA+AGG 0.396252 8:+60286740 MsG0880045507.01.T01:CDS
AGTGAGCATCCTAAAAGAAT+AGG 0.396585 8:-60288736 None:intergenic
AAGATTGTTAAGATGAATGT+TGG 0.398024 8:+60288615 MsG0880045507.01.T01:CDS
TATAATTTATTTACCTGAAG+TGG 0.404860 8:-60286916 None:intergenic
TAAAACTCACGAGTTCCTTA+AGG 0.410242 8:-60288551 None:intergenic
GGTCATTGCCAAGGTCTATT+GGG 0.427661 8:+60288658 MsG0880045507.01.T01:CDS
GAAAACTCACAGATCATTAC+CGG 0.433652 8:+60286341 MsG0880045507.01.T01:CDS
ATCATCAAAACCAAGTATAG+TGG 0.449101 8:+60286869 MsG0880045507.01.T01:CDS
GTGAGCATCCTAAAAGAATA+GGG 0.458522 8:-60288735 None:intergenic
AGCTTTGTGCCGATTACAAT+CGG 0.464135 8:+60288421 MsG0880045507.01.T01:CDS
GTTGAGATTAAGGAGAAGAA+GGG 0.467569 8:+60286741 MsG0880045507.01.T01:CDS
TCGAGTTTATTCGATAAAGA+AGG 0.468693 8:+60286717 MsG0880045507.01.T01:CDS
GAGGAGTTATCCACTATACT+TGG 0.471823 8:-60286879 None:intergenic
AGATTGTTAAGATGAATGTT+GGG 0.528167 8:+60288616 MsG0880045507.01.T01:CDS
TCAAGGTTCCCAATAGACCT+TGG 0.544491 8:-60288666 None:intergenic
ATTCTTGGAGGAACTTCAAG+AGG 0.547035 8:-60288789 None:intergenic
TGGGAACCTTGAAATGCTTG+AGG 0.571340 8:+60288677 MsG0880045507.01.T01:CDS
CAAAGGTTCTTCTTCCATGT+CGG 0.573738 8:+60286476 MsG0880045507.01.T01:CDS
AAGAAGAAGAAGCAACATCA+CGG 0.576761 8:-60286665 None:intergenic
CTGATATGAGGTCATTGCCA+AGG 0.590050 8:+60288649 MsG0880045507.01.T01:CDS
AGAAGAAGAAGCAACATCAC+GGG 0.592688 8:-60286664 None:intergenic
TGTGAAAAGCTCTTCCGACA+TGG 0.595777 8:-60286490 None:intergenic
ATCAAATTCGACATTGTCGT+AGG 0.597782 8:-60288525 None:intergenic
AGAAGTTGAAGCAGCCCTAA+CGG 0.603127 8:+60286380 MsG0880045507.01.T01:CDS
AAAGCTTTGCCTGAAGCAGT+AGG 0.623092 8:+60288447 MsG0880045507.01.T01:CDS
TCTGTTGATCGTGATAATGA+TGG 0.626419 8:-60286297 None:intergenic
CTCACAGATCATTACCGGCA+AGG 0.646403 8:+60286346 MsG0880045507.01.T01:CDS
ACCTCACAGATAGAATCTCA+AGG 0.658969 8:-60288482 None:intergenic
TAGACTTCGAGTATTGAGAG+TGG 0.666026 8:+60288758 MsG0880045507.01.T01:CDS
TCATCGTCTAGAAAATCCAA+AGG 0.668592 8:+60286459 MsG0880045507.01.T01:CDS
GCCTTGAGATTCTATCTGTG+AGG 0.675179 8:+60288481 MsG0880045507.01.T01:CDS
GATCGTGATAATGATGGCGA+CGG 0.711368 8:-60286291 None:intergenic
AGTTGAAGCAGCCCTAACGG+TGG 0.727439 8:+60286383 MsG0880045507.01.T01:CDS
AGTGGATGCATGTTTCATCG+AGG 0.769231 8:-60286898 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAATTTATTTACACTT+TGG + Chr8:60287392-60287411 MsG0880045507.01.T01:intron 10.0%
!! TTCAGGTAAATAAATTATAT+TGG + Chr8:60286920-60286939 MsG0880045507.01.T01:intron 15.0%
!!! AAGCTTTTTTTTTTTTTTGT+AGG + Chr8:60287895-60287914 MsG0880045507.01.T01:intron 15.0%
!!! TGTAATTTTTTTCTTCTTTT+AGG + Chr8:60287196-60287215 MsG0880045507.01.T01:intron 15.0%
!!! TTATTTTCAAATGAAATTGA+AGG + Chr8:60287019-60287038 MsG0880045507.01.T01:intron 15.0%
!! AGAAATTCTGATATACTAAT+TGG - Chr8:60287630-60287649 None:intergenic 20.0%
!! GTTATATTACTATAGTTATG+TGG + Chr8:60287041-60287060 MsG0880045507.01.T01:intron 20.0%
!! TATAATTTATTTACCTGAAG+TGG - Chr8:60286919-60286938 None:intergenic 20.0%
!!! AAAATTAGTGAGAATTTTCA+TGG - Chr8:60287341-60287360 None:intergenic 20.0%
!!! AGTATATCAGAATTTCTTTT+AGG + Chr8:60287633-60287652 MsG0880045507.01.T01:intron 20.0%
!!! TATGAAAAGATACATTTTTG+TGG - Chr8:60287532-60287551 None:intergenic 20.0%
!!! TTTTTTCTTTCCATTCTTTT+AGG + Chr8:60287809-60287828 MsG0880045507.01.T01:intron 20.0%
! AAGATTGTTAAGATGAATGT+TGG + Chr8:60288615-60288634 MsG0880045507.01.T01:CDS 25.0%
! ACAACAACAATATTTGTCAT+GGG - Chr8:60286970-60286989 None:intergenic 25.0%
! AGATTGTTAAGATGAATGTT+GGG + Chr8:60288616-60288635 MsG0880045507.01.T01:CDS 25.0%
! ATTACAAGACAAGAGATTTA+AGG - Chr8:60287182-60287201 None:intergenic 25.0%
! ATTGAAATTTCTGCAAAGAA+AGG + Chr8:60287969-60287988 MsG0880045507.01.T01:intron 25.0%
! ATTTGAGTGTAAATCCAAAT+AGG - Chr8:60288146-60288165 None:intergenic 25.0%
! CAATAGATTACATAGATCTT+TGG + Chr8:60287424-60287443 MsG0880045507.01.T01:intron 25.0%
! TAAAAACATGAGAGAGAAAA+TGG - Chr8:60287141-60287160 None:intergenic 25.0%
! TAAATTCAAACAAAGTAGAG+AGG - Chr8:60287309-60287328 None:intergenic 25.0%
! TGAACCTACAAACAAATTAA+AGG + Chr8:60288003-60288022 MsG0880045507.01.T01:intron 25.0%
! TGCAGAAATTTCAATTAAGT+TGG - Chr8:60287964-60287983 None:intergenic 25.0%
!! ATGAGATTTTCAATAGAATC+TGG - Chr8:60288184-60288203 None:intergenic 25.0%
!! CAGTTATTTGGTGAATAATA+AGG + Chr8:60286794-60286813 MsG0880045507.01.T01:CDS 25.0%
!!! TTTTCTTCTTTTAGGATGAA+AGG + Chr8:60287204-60287223 MsG0880045507.01.T01:intron 25.0%
!!! TTTTTTGTAGGTGAAGAAAA+TGG + Chr8:60287907-60287926 MsG0880045507.01.T01:intron 25.0%
AATACTGATGCTTATGCAAT+TGG + Chr8:60286837-60286856 MsG0880045507.01.T01:CDS 30.0%
ATCATCAAAACCAAGTATAG+TGG + Chr8:60286869-60286888 MsG0880045507.01.T01:CDS 30.0%
ATGAAAGGTGGAAATTTCAA+TGG + Chr8:60287832-60287851 MsG0880045507.01.T01:intron 30.0%
ATGAAAGGTTGACATTTCAA+TGG + Chr8:60287219-60287238 MsG0880045507.01.T01:intron 30.0%
ATTGGTTACCTGATTCATTA+GGG + Chr8:60288035-60288054 MsG0880045507.01.T01:intron 30.0%
CACAACAACAATATTTGTCA+TGG - Chr8:60286971-60286990 None:intergenic 30.0%
CACTAAAGATGACAGTTATT+TGG + Chr8:60286782-60286801 MsG0880045507.01.T01:CDS 30.0%
CCAAATAGGTTAAAGATGAA+AGG - Chr8:60288132-60288151 None:intergenic 30.0%
CCTTTCATCTTTAACCTATT+TGG + Chr8:60288129-60288148 MsG0880045507.01.T01:intron 30.0%
CGAAGAAGAAACAAAATTCT+TGG - Chr8:60286700-60286719 None:intergenic 30.0%
GACGACATACAAAGAAAAAA+TGG + Chr8:60287781-60287800 MsG0880045507.01.T01:intron 30.0%
GAGATTTAAGGATAGAAATG+TGG - Chr8:60287170-60287189 None:intergenic 30.0%
GTCGAATTTGATTAACCTTA+AGG + Chr8:60288536-60288555 MsG0880045507.01.T01:CDS 30.0%
GTTATCAACTTTACTCACTT+TGG + Chr8:60288060-60288079 MsG0880045507.01.T01:intron 30.0%
TCGAGTTTATTCGATAAAGA+AGG + Chr8:60286717-60286736 MsG0880045507.01.T01:CDS 30.0%
TTAAAATGCAACCATGAGTA+TGG - Chr8:60287592-60287611 None:intergenic 30.0%
! TCACAATTTTACAAGAGATG+CGG + Chr8:60286508-60286527 MsG0880045507.01.T01:CDS 30.0%
!! AATTAAAGGACCAAGTTGAT+TGG + Chr8:60288017-60288036 MsG0880045507.01.T01:intron 30.0%
!! TAAAGAAGGTGTTGAGATTA+AGG + Chr8:60286731-60286750 MsG0880045507.01.T01:CDS 30.0%
!! TGGTCCTTTAATTTGTTTGT+AGG - Chr8:60288010-60288029 None:intergenic 30.0%
!!! TTCCATTCTTTTAGGATGAA+AGG + Chr8:60287817-60287836 MsG0880045507.01.T01:intron 30.0%
AAGAAGAAGAAGCAACATCA+CGG - Chr8:60286668-60286687 None:intergenic 35.0%
AATCAGGTAACCAATCAACT+TGG - Chr8:60288030-60288049 None:intergenic 35.0%
AATGTCACAACACAACTTGT+AGG + Chr8:60287696-60287715 MsG0880045507.01.T01:intron 35.0%
ACATGCAACCATTGTCTTAT+CGG - Chr8:60287275-60287294 None:intergenic 35.0%
ACCACATTCTCTTTCCAAAT+TGG + Chr8:60288249-60288268 MsG0880045507.01.T01:intron 35.0%
AGATAGTGATGAAAGCTTGT+GGG + Chr8:60287455-60287474 MsG0880045507.01.T01:intron 35.0%
AGTGAGCATCCTAAAAGAAT+AGG - Chr8:60288739-60288758 None:intergenic 35.0%
ATAACCTTGCCTTTCACAAT+AGG + Chr8:60288103-60288122 MsG0880045507.01.T01:intron 35.0%
ATAAGATCGAAGCTACGTTA+TGG - Chr8:60287490-60287509 None:intergenic 35.0%
ATCAAATTCGACATTGTCGT+AGG - Chr8:60288528-60288547 None:intergenic 35.0%
ATGTCACAACACAACTTGTA+GGG + Chr8:60287697-60287716 MsG0880045507.01.T01:intron 35.0%
CACCTTTCATCCTAAAAGAA+TGG - Chr8:60287822-60287841 None:intergenic 35.0%
GAAAACTCACAGATCATTAC+CGG + Chr8:60286341-60286360 MsG0880045507.01.T01:CDS 35.0%
GAAGAAATTCCACACTCAAT+CGG + Chr8:60288378-60288397 MsG0880045507.01.T01:intron 35.0%
GAATCTCACATTATGCTGAT+TGG + Chr8:60287854-60287873 MsG0880045507.01.T01:intron 35.0%
GATAACTTCCCTAATGAATC+AGG - Chr8:60288046-60288065 None:intergenic 35.0%
GTAGCAAAACACAAACTTTC+AGG - Chr8:60288594-60288613 None:intergenic 35.0%
GTGAGCATCCTAAAAGAATA+GGG - Chr8:60288738-60288757 None:intergenic 35.0%
GTTGAGATTAAGGAGAAGAA+GGG + Chr8:60286741-60286760 MsG0880045507.01.T01:CDS 35.0%
TAAAACTCACGAGTTCCTTA+AGG - Chr8:60288554-60288573 None:intergenic 35.0%
TCATCGTCTAGAAAATCCAA+AGG + Chr8:60286459-60286478 MsG0880045507.01.T01:CDS 35.0%
TGAATGAGATACCATACTCA+TGG + Chr8:60287578-60287597 MsG0880045507.01.T01:intron 35.0%
TGTTGAGATTAAGGAGAAGA+AGG + Chr8:60286740-60286759 MsG0880045507.01.T01:CDS 35.0%
TTCATTACCCGATAAGACAA+TGG + Chr8:60287264-60287283 MsG0880045507.01.T01:intron 35.0%
TTTGTAGGTGAAGAAAATGG+TGG + Chr8:60287910-60287929 MsG0880045507.01.T01:intron 35.0%
! AGGATCAATTTCCCTTTTCT+GGG - Chr8:60287116-60287135 None:intergenic 35.0%
! ATGCTCTTCCCTATTCTTTT+AGG + Chr8:60288727-60288746 MsG0880045507.01.T01:CDS 35.0%
! GATTGGTTACCTGATTCATT+AGG + Chr8:60288034-60288053 MsG0880045507.01.T01:intron 35.0%
! GGAACAATTTTGCTGATATG+AGG + Chr8:60288637-60288656 MsG0880045507.01.T01:CDS 35.0%
! TCTGTTGATCGTGATAATGA+TGG - Chr8:60286300-60286319 None:intergenic 35.0%
!! TTAATTTGTCCTACTGCTTC+AGG - Chr8:60288459-60288478 None:intergenic 35.0%
!!! CATTCTTTTAGGATGAAAGG+TGG + Chr8:60287820-60287839 MsG0880045507.01.T01:intron 35.0%
AACAAGTGACCCGATTGAAT+CGG - Chr8:60288322-60288341 None:intergenic 40.0%
AATCGGCACAAAGCTCTTTA+AGG - Chr8:60288416-60288435 None:intergenic 40.0%
ACATGAGAGAGAAAATGGAG+AGG - Chr8:60287136-60287155 None:intergenic 40.0%
ACCTCACAGATAGAATCTCA+AGG - Chr8:60288485-60288504 None:intergenic 40.0%
AGAAGAAGAAGCAACATCAC+GGG - Chr8:60286667-60286686 None:intergenic 40.0%
ATCGGCACAAAGCTCTTTAA+GGG - Chr8:60288415-60288434 None:intergenic 40.0%
ATGAAACATGCATCCACTTC+AGG + Chr8:60286903-60286922 MsG0880045507.01.T01:CDS 40.0%
ATTCTTGGAGGAACTTCAAG+AGG - Chr8:60288792-60288811 None:intergenic 40.0%
CAAAGGTTCTTCTTCCATGT+CGG + Chr8:60286476-60286495 MsG0880045507.01.T01:CDS 40.0%
CATGCAACCATTGTCTTATC+GGG - Chr8:60287274-60287293 None:intergenic 40.0%
CCAATTCCTCAAGCATTTCA+AGG - Chr8:60288686-60288705 None:intergenic 40.0%
CCTTGAAATGCTTGAGGAAT+TGG + Chr8:60288683-60288702 MsG0880045507.01.T01:CDS 40.0%
CTAATTGGTGAAGACTTCTG+AGG - Chr8:60287615-60287634 None:intergenic 40.0%
CTTTGGATTTGTCCCAAAAC+CGG + Chr8:60288077-60288096 MsG0880045507.01.T01:intron 40.0%
GAAAGGTTGCCTATTGTGAA+AGG - Chr8:60288115-60288134 None:intergenic 40.0%
GAGATAGTGATGAAAGCTTG+TGG + Chr8:60287454-60287473 MsG0880045507.01.T01:intron 40.0%
GAGGAGTTATCCACTATACT+TGG - Chr8:60286882-60286901 None:intergenic 40.0%
GCCAATTTGGAAAGAGAATG+TGG - Chr8:60288253-60288272 None:intergenic 40.0%
GCTTCAACTTCTTCTGTTCT+TGG - Chr8:60286372-60286391 None:intergenic 40.0%
GGATTCTTGTGTCACATTAG+AGG + Chr8:60287240-60287259 MsG0880045507.01.T01:intron 40.0%
TCTCGACGATTCTTCTTTGT+CGG - Chr8:60286418-60286437 None:intergenic 40.0%
TGAAAGGCAAGGTTATGATC+CGG - Chr8:60288099-60288118 None:intergenic 40.0%
! CAAGGTTATGATCCGGTTTT+GGG - Chr8:60288092-60288111 None:intergenic 40.0%
! GAGGATCAATTTCCCTTTTC+TGG - Chr8:60287117-60287136 None:intergenic 40.0%
!! ACTCGTGAGTTTTAATGAGC+TGG + Chr8:60288560-60288579 MsG0880045507.01.T01:CDS 40.0%
!! AGCTTTGAGCCGATTGTAAT+CGG - Chr8:60288433-60288452 None:intergenic 40.0%
!! AGCTTTGTGCCGATTACAAT+CGG + Chr8:60288421-60288440 MsG0880045507.01.T01:CDS 40.0%
!! TAGACTTCGAGTATTGAGAG+TGG + Chr8:60288758-60288777 MsG0880045507.01.T01:CDS 40.0%
AAAGCTTTGCCTGAAGCAGT+AGG + Chr8:60288447-60288466 MsG0880045507.01.T01:CDS 45.0%
ACAAGTGACCCGATTGAATC+GGG - Chr8:60288321-60288340 None:intergenic 45.0%
AGAAGTTGAAGCAGCCCTAA+CGG + Chr8:60286380-60286399 MsG0880045507.01.T01:CDS 45.0%
AGGTCATTGCCAAGGTCTAT+TGG + Chr8:60288657-60288676 MsG0880045507.01.T01:CDS 45.0%
AGTGGATGCATGTTTCATCG+AGG - Chr8:60286901-60286920 None:intergenic 45.0%
CAACAATGACCGATTGAGTG+TGG - Chr8:60288390-60288409 None:intergenic 45.0%
CGACATGGAAGAAGAACCTT+TGG - Chr8:60286478-60286497 None:intergenic 45.0%
CGATATTGTGGCCCAGAAAA+GGG + Chr8:60287102-60287121 MsG0880045507.01.T01:intron 45.0%
CTGATATGAGGTCATTGCCA+AGG + Chr8:60288649-60288668 MsG0880045507.01.T01:CDS 45.0%
GCCTTGAGATTCTATCTGTG+AGG + Chr8:60288481-60288500 MsG0880045507.01.T01:CDS 45.0%
GGTCATTGCCAAGGTCTATT+GGG + Chr8:60288658-60288677 MsG0880045507.01.T01:CDS 45.0%
GTTGCCTATTGTGAAAGGCA+AGG - Chr8:60288110-60288129 None:intergenic 45.0%
TCAAGGTTCCCAATAGACCT+TGG - Chr8:60288669-60288688 None:intergenic 45.0%
TCCTTGCTTCCCGATTCAAT+CGG + Chr8:60288309-60288328 MsG0880045507.01.T01:intron 45.0%
TCGATATTGTGGCCCAGAAA+AGG + Chr8:60287101-60287120 MsG0880045507.01.T01:intron 45.0%
TCTTTACGCCCTCGATATTG+TGG + Chr8:60287090-60287109 MsG0880045507.01.T01:intron 45.0%
TGGGAACCTTGAAATGCTTG+AGG + Chr8:60288677-60288696 MsG0880045507.01.T01:CDS 45.0%
TGTGAAAAGCTCTTCCGACA+TGG - Chr8:60286493-60286512 None:intergenic 45.0%
TTTCTGGGCCACAATATCGA+GGG - Chr8:60287101-60287120 None:intergenic 45.0%
! GATCGTGATAATGATGGCGA+CGG - Chr8:60286294-60286313 None:intergenic 45.0%
! GCAAGGTTATGATCCGGTTT+TGG - Chr8:60288093-60288112 None:intergenic 45.0%
! TTTTCTGGGCCACAATATCG+AGG - Chr8:60287102-60287121 None:intergenic 45.0%
!!! CTTTTCGAGTCGTGCCAATT+TGG - Chr8:60288266-60288285 None:intergenic 45.0%
!! GTAAATAAATTTATATTTAT+GGG - Chr8:60287388-60287407 None:intergenic 5.0%
!! TGTAAATAAATTTATATTTA+TGG - Chr8:60287389-60287408 None:intergenic 5.0%
CCTTGCTTCCCGATTCAATC+GGG + Chr8:60288310-60288329 MsG0880045507.01.T01:intron 50.0%
CTCACAGATCATTACCGGCA+AGG + Chr8:60286346-60286365 MsG0880045507.01.T01:CDS 50.0%
TTGTGGCATCATATGCGCGT+AGG - Chr8:60287515-60287534 None:intergenic 50.0%
! GGCGTTTTCAACCACCGTTA+GGG - Chr8:60286397-60286416 None:intergenic 50.0%
!! TCTTCTGTTCTTGGCCTTGC+CGG - Chr8:60286363-60286382 None:intergenic 50.0%
AGTTGAAGCAGCCCTAACGG+TGG + Chr8:60286383-60286402 MsG0880045507.01.T01:CDS 55.0%
CCCGATTGAATCGGGAAGCA+AGG - Chr8:60288313-60288332 None:intergenic 55.0%
! CGGCGTTTTCAACCACCGTT+AGG - Chr8:60286398-60286417 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr8 gene 60286276 60288815 60286276 ID=MsG0880045507.01;Name=MsG0880045507.01
Chr8 mRNA 60286276 60288815 60286276 ID=MsG0880045507.01.T01;Parent=MsG0880045507.01;Name=MsG0880045507.01.T01;_AED=0.24;_eAED=0.24;_QI=0|0|0|1|1|1|2|0|347
Chr8 exon 60286276 60286924 60286276 ID=MsG0880045507.01.T01:exon:12423;Parent=MsG0880045507.01.T01
Chr8 exon 60288421 60288815 60288421 ID=MsG0880045507.01.T01:exon:12424;Parent=MsG0880045507.01.T01
Chr8 CDS 60286276 60286924 60286276 ID=MsG0880045507.01.T01:cds;Parent=MsG0880045507.01.T01
Chr8 CDS 60288421 60288815 60288421 ID=MsG0880045507.01.T01:cds;Parent=MsG0880045507.01.T01
Gene Sequence

>MsG0880045507.01.T01

ATGGATTTATCATCACCGTCGCCATCATTATCACGATCAACAGAAGATGCAGTAGAAGAAATAATGAAAACTCACAGATCATTACCGGCAAGGCCAAGAACAGAAGAAGTTGAAGCAGCCCTAACGGTGGTTGAAAACGCCGACAAAGAAGAATCGTCGAGACTAGAAGCATTTTCTTCATCATCATCGTCTAGAAAATCCAAAGGTTCTTCTTCCATGTCGGAAGAGCTTTTCACAATTTTACAAGAGATGCGGAAAAGTATTGTGTCTTTCGAATGCAAAGAGAAAAAGAGAGATGCTCTTAAACTCTTAGAACTTGAAAAAATTCATGTTCTATTTGATGATTTCATTCTCAAAGCTTCTAATTGCGTTTCAAGTTCTAATAAGTCCCGTGATGTTGCTTCTTCTTCTTCTTCTTCTTCCAAGAATTTTGTTTCTTCTTCGAGTTTATTCGATAAAGAAGGTGTTGAGATTAAGGAGAAGAAGGGTTCAAAGTTAGCATTATTCACTAAAGATGACAGTTATTTGGTGAATAATAAGGCTATGTCTACATTCAAGTTTAATACTGATGCTTATGCAATTGGACACAAGATATCATCAAAACCAAGTATAGTGGATAACTCCTCGATGAAACATGCATCCACTTCAGAGCTTTGTGCCGATTACAATCGGCTCAAAGCTTTGCCTGAAGCAGTAGGACAAATTAAGAGCCTTGAGATTCTATCTGTGAGGTACAACAACATTAAACAATTGCCTACGACAATGTCGAATTTGATTAACCTTAAGGAACTCGTGAGTTTTAATGAGCTGGAGTTTGTTCCTGAAAGTTTGTGTTTTGCTACTAAGATTGTTAAGATGAATGTTGGGAACAATTTTGCTGATATGAGGTCATTGCCAAGGTCTATTGGGAACCTTGAAATGCTTGAGGAATTGGATATTAGTAATAATCAAATACATGCTCTTCCCTATTCTTTTAGGATGCTCACTAGACTTCGAGTATTGAGAGTGGAAGAAAATCCTCTTGAAGTTCCTCCAAGAATATAG
Protein sequence

>MsG0880045507.01.T01

MDLSSPSPSLSRSTEDAVEEIMKTHRSLPARPRTEEVEAALTVVENADKEESSRLEAFSSSSSSRKSKGSSSMSEELFTILQEMRKSIVSFECKEKKRDALKLLELEKIHVLFDDFILKASNCVSSSNKSRDVASSSSSSSKNFVSSSSLFDKEGVEIKEKKGSKLALFTKDDSYLVNNKAMSTFKFNTDAYAIGHKISSKPSIVDNSSMKHASTSELCADYNRLKALPEAVGQIKSLEILSVRYNNIKQLPTTMSNLINLKELVSFNELEFVPESLCFATKIVKMNVGNNFADMRSLPRSIGNLEMLEELDISNNQIHALPYSFRMLTRLRVLRVEENPLEVPPRI*