AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016151.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016151.01.T01 MTR_3g084450 67.234 235 10 4 113 281 279 512 8.31e-94 286
MsG0380016151.01.T01 MTR_3g084450 75.472 106 12 3 1 92 46 151 1.59e-43 155
MsG0380016151.01.T01 MTR_3g084450 67.234 235 10 4 113 281 487 720 1.09e-91 286
MsG0380016151.01.T01 MTR_3g084450 75.472 106 12 3 1 92 254 359 8.71e-43 155
MsG0380016151.01.T01 MTR_3g084470 62.393 234 22 4 113 281 483 715 9.73e-85 268
MsG0380016151.01.T01 MTR_3g084470 66.990 103 21 2 1 90 251 353 2.29e-36 137
MsG0380016151.01.T01 MTR_8g083170 57.203 236 33 4 113 281 490 724 1.64e-76 246
MsG0380016151.01.T01 MTR_8g083170 62.857 105 26 2 1 92 258 362 3.13e-35 134
MsG0380016151.01.T01 MTR_4g057730 28.428 299 135 10 5 237 185 470 1.42e-21 94.4
MsG0380016151.01.T01 MTR_4g057730 28.428 299 135 10 5 237 185 470 1.50e-21 94.0
MsG0380016151.01.T01 MTR_4g057730 28.287 251 110 8 5 189 185 431 9.03e-19 85.9
MsG0380016151.01.T01 MTR_5g027500 40.816 98 46 2 125 222 396 481 6.76e-15 74.7
MsG0380016151.01.T01 MTR_4g077900 32.704 159 79 4 123 265 304 450 2.19e-14 73.2
MsG0380016151.01.T01 MTR_5g027480 34.615 130 70 3 109 238 370 484 1.06e-13 71.2
MsG0380016151.01.T01 MTR_2g105570 35.652 115 62 2 123 237 374 476 2.60e-13 70.1
MsG0380016151.01.T01 MTR_2g095510 36.522 115 51 3 118 222 350 452 2.85e-13 70.1
MsG0380016151.01.T01 MTR_3g088870 33.824 136 71 3 121 249 382 505 5.77e-13 68.9
MsG0380016151.01.T01 MTR_1g104810 36.634 101 51 3 139 238 425 513 6.31e-13 68.9
MsG0380016151.01.T01 MTR_1g104810 36.634 101 51 3 139 238 492 580 7.06e-13 68.9
MsG0380016151.01.T01 MTR_1g073180 38.636 132 61 5 125 249 385 503 8.68e-13 68.6
MsG0380016151.01.T01 MTR_1g090737 34.194 155 74 4 127 265 396 538 9.84e-13 68.6
MsG0380016151.01.T01 MTR_1g073180 38.636 132 61 5 125 249 363 481 1.17e-12 68.2
MsG0380016151.01.T01 MTR_1g026310 37.719 114 59 2 124 237 387 488 1.93e-12 67.4
MsG0380016151.01.T01 MTR_3g460770 36.283 113 60 3 125 237 369 469 5.35e-12 66.2
MsG0380016151.01.T01 MTR_2g095510 41.892 74 33 1 118 181 350 423 6.80e-12 65.9
MsG0380016151.01.T01 MTR_3g088880 33.088 136 72 3 121 249 380 503 1.12e-11 65.1
MsG0380016151.01.T01 MTR_5g007640 38.000 100 50 2 123 222 413 500 1.16e-11 65.1
MsG0380016151.01.T01 MTR_1g063120 35.354 99 52 2 125 223 380 466 3.77e-11 63.5
MsG0380016151.01.T01 MTR_1g063110 35.354 99 52 2 125 223 376 462 9.24e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016151.01.T01 AT4G14070 54.464 224 45 3 113 280 504 726 1.51e-71 234
MsG0380016151.01.T01 AT4G14070 59.406 101 28 2 3 90 274 374 2.03e-29 117
MsG0380016151.01.T01 AT3G23790 54.237 236 40 4 113 281 488 722 4.67e-71 232
MsG0380016151.01.T01 AT3G23790 63.107 103 23 2 2 90 257 358 1.65e-33 129
MsG0380016151.01.T01 AT1G20510 27.723 303 137 9 3 237 184 472 5.03e-21 92.8
MsG0380016151.01.T01 AT1G20510 27.723 303 137 9 3 237 184 472 5.95e-21 92.8
MsG0380016151.01.T01 AT1G20510 27.935 247 108 7 3 181 184 428 3.80e-19 87.4
MsG0380016151.01.T01 AT3G21230 40.517 116 57 2 123 238 394 497 1.67e-16 79.7
MsG0380016151.01.T01 AT3G21230 40.517 116 57 2 123 238 394 497 1.77e-16 79.3
MsG0380016151.01.T01 AT3G21230 45.000 100 43 2 123 222 394 481 1.85e-16 79.7
MsG0380016151.01.T01 AT5G63380 29.167 240 101 9 9 181 205 442 6.85e-16 77.8
MsG0380016151.01.T01 AT3G21240 33.898 118 66 2 123 240 380 485 8.79e-14 71.6
MsG0380016151.01.T01 AT3G21240 33.898 118 66 2 123 240 380 485 8.79e-14 71.6
MsG0380016151.01.T01 AT3G21240 34.483 116 64 2 123 238 380 483 1.41e-13 70.9
MsG0380016151.01.T01 AT1G20480 35.099 151 82 4 91 237 355 493 1.77e-13 70.9
MsG0380016151.01.T01 AT4G05160 39.796 98 47 2 125 222 372 457 1.78e-13 70.5
MsG0380016151.01.T01 AT5G27600 25.854 205 77 6 139 280 495 687 3.11e-13 70.1
MsG0380016151.01.T01 AT4G19010 36.190 105 55 2 127 231 392 484 8.70e-13 68.6
MsG0380016151.01.T01 AT1G20500 35.714 112 55 3 116 222 364 463 7.76e-11 62.8
MsG0380016151.01.T01 AT3G05970 38.776 98 45 1 6 88 259 356 8.55e-11 62.8

Find 90 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGTTATAAGCCACATTTAA+TGG 0.209234 3:-79659877 MsG0380016151.01.T01:CDS
CATGTTTGAAACAATAAAAT+TGG 0.257278 3:-79660424 MsG0380016151.01.T01:CDS
CTATAATGACAGATTGATAA+TGG 0.276137 3:-79656604 MsG0380016151.01.T01:intron
TTGAATTTGCAGAATGGATA+TGG 0.306555 3:-79658901 MsG0380016151.01.T01:CDS
AAAGTTGTAGATTCTGAAAC+TGG 0.332814 3:-79658206 MsG0380016151.01.T01:CDS
ATTGCTGGCCACCATTCAAT+TGG 0.343850 3:-79657666 MsG0380016151.01.T01:CDS
TAAAATACTATACAGGCTAT+TGG 0.351278 3:-79658925 MsG0380016151.01.T01:intron
ACTTGTATAGATTCTCTATC+TGG 0.356723 3:+79656524 None:intergenic
ATTGGGCGGAGTCGTAATTC+TGG 0.364386 3:-79657648 MsG0380016151.01.T01:CDS
TTCTAAGTATGTTGCCTCCT+TGG 0.366326 3:-79660098 MsG0380016151.01.T01:CDS
TGTAACATACCATTGACATT+AGG 0.368601 3:+79656494 None:intergenic
CTACAAATCGGGTCATTGAT+AGG 0.369287 3:-79657722 MsG0380016151.01.T01:CDS
TGACAACAATTTGTTGTATG+AGG 0.378602 3:+79657269 None:intergenic
TCCCTTCGAACTTTCATTGT+GGG 0.379570 3:+79656571 None:intergenic
TGGGTTAGCATAACACCTTT+AGG 0.379716 3:+79660357 None:intergenic
GACACCATTGTGCTTTCATC+AGG 0.404554 3:-79657594 MsG0380016151.01.T01:intron
AGCTCAAACACAGGATCAAA+TGG 0.411118 3:-79656462 MsG0380016151.01.T01:three_prime_UTR
GGTGACATAGGTTGGATTGC+TGG 0.413768 3:-79657681 MsG0380016151.01.T01:CDS
ATACAACAAATTGTTGTCAT+TGG 0.414526 3:-79657265 MsG0380016151.01.T01:CDS
AGAATCCTTCAGCTACAAAT+CGG 0.416763 3:-79657734 MsG0380016151.01.T01:CDS
GTTATTGCTGCTCGGCGACT+TGG 0.423372 3:-79658860 MsG0380016151.01.T01:CDS
TAGTACCCCTTCATCAATTG+TGG 0.424278 3:+79658137 None:intergenic
AGAAGGTGAAAATGTTGAAC+CGG 0.438102 3:-79657323 MsG0380016151.01.T01:CDS
ATAGAGTTATGGCTCAATAC+AGG 0.440234 3:-79656549 MsG0380016151.01.T01:CDS
TAATCTAACTATTGTGGTAA+TGG 0.441469 3:+79656370 None:intergenic
GTCTATGTGCCACTGGCATT+AGG 0.444410 3:+79656417 None:intergenic
AGGGATGGCTGGCTGAATAC+TGG 0.447110 3:-79657702 MsG0380016151.01.T01:CDS
TATAATGACAGATTGATAAT+GGG 0.458531 3:-79656603 MsG0380016151.01.T01:intron
GGTGGTGTGATTGTTGTTGA+AGG 0.461244 3:-79657627 MsG0380016151.01.T01:CDS
GTTCTTCCACCTGGTTCAAA+GGG 0.463824 3:-79658179 MsG0380016151.01.T01:CDS
ACAAATTGTTGTCATTGGTC+AGG 0.465907 3:-79657260 MsG0380016151.01.T01:intron
TTGTATGAGGTTACTCCTCA+TGG 0.473965 3:+79657282 None:intergenic
TCTCGTAAATGATCCCTTCA+CGG 0.477946 3:-79656703 MsG0380016151.01.T01:intron
TTGCTGGCCACCATTCAATT+GGG 0.483696 3:-79657665 MsG0380016151.01.T01:CDS
TTCAAAATTCCCTTTGAACC+AGG 0.484352 3:+79658170 None:intergenic
GCAGCTTCTTCAAGCTCTCC+CGG 0.488586 3:+79657304 None:intergenic
GTGTACACAAGTGGTACTAC+TGG 0.489782 3:-79660384 MsG0380016151.01.T01:CDS
GGATCATTTACGAGAAGGAT+TGG 0.491261 3:+79656711 None:intergenic
GTACAAAGTTTCAAAACTAA+AGG 0.494560 3:+79659846 None:intergenic
TACGACTCCGCCCAATTGAA+TGG 0.495276 3:+79657655 None:intergenic
ATTGGTTTGAATTTGCAGAA+TGG 0.503914 3:-79658907 MsG0380016151.01.T01:CDS
AGTTCGAAGGGATAGAGTTA+TGG 0.505449 3:-79656560 MsG0380016151.01.T01:CDS
ATGGTTTAACAGAAACTTCA+CGG 0.515158 3:-79658882 MsG0380016151.01.T01:CDS
AGTTCTTCCACCTGGTTCAA+AGG 0.516190 3:-79658180 MsG0380016151.01.T01:CDS
CAGGGGCCCACAATTGATGA+AGG 0.520046 3:-79658144 MsG0380016151.01.T01:CDS
GAATCCTTCAGCTACAAATC+GGG 0.521388 3:-79657733 MsG0380016151.01.T01:CDS
GACGTTGTACCTACTGAAGC+TGG 0.521458 3:-79660129 MsG0380016151.01.T01:CDS
ATCCCTTCGAACTTTCATTG+TGG 0.526009 3:+79656570 None:intergenic
GTAAACCAACCTAATGTCAA+TGG 0.530199 3:-79656503 MsG0380016151.01.T01:exon
AGTACCCCTTCATCAATTGT+GGG 0.533326 3:+79658138 None:intergenic
CCTGATGCAAAAGATTCTGA+TGG 0.540187 3:+79660337 None:intergenic
TACAAATCGGGTCATTGATA+GGG 0.544363 3:-79657721 MsG0380016151.01.T01:CDS
ATGACCCGATTTGTAGCTGA+AGG 0.547200 3:+79657729 None:intergenic
ATGCTTAATCTAACCGTGAA+GGG 0.548255 3:+79656690 None:intergenic
TGAATACTGGTGACATAGGT+TGG 0.556669 3:-79657689 MsG0380016151.01.T01:CDS
TTTCTAGATCAAACACCTAT+CGG 0.557238 3:-79660151 MsG0380016151.01.T01:intron
GGTACTACTGGAAATCCTAA+AGG 0.559374 3:-79660372 MsG0380016151.01.T01:CDS
TATTACTAATCTAACTATTG+TGG 0.562098 3:+79656364 None:intergenic
GGGTCATTGATAGGGATGGC+TGG 0.568019 3:-79657713 MsG0380016151.01.T01:CDS
ACATACCATTGACATTAGGT+TGG 0.573803 3:+79656498 None:intergenic
AGCTCTTCATATGCATGCCA+AGG 0.575128 3:+79660081 None:intergenic
GGTACGAGTCTATGTGCCAC+TGG 0.579150 3:+79656410 None:intergenic
AATCTATCTCCAGCTTCAGT+AGG 0.579782 3:+79660120 None:intergenic
ACTGGTGAAGTTCTTCCACC+TGG 0.584400 3:-79658188 MsG0380016151.01.T01:CDS
GATGCTTAATCTAACCGTGA+AGG 0.585252 3:+79656689 None:intergenic
CTGATGCAAAAGATTCTGAT+GGG 0.591884 3:+79660338 None:intergenic
GCTACTCTTGTGTACACAAG+TGG 0.593098 3:-79660393 MsG0380016151.01.T01:CDS
AAAATTCCCTTTGAACCAGG+TGG 0.596173 3:+79658173 None:intergenic
TGAAGGGATCATTTACGAGA+AGG 0.596427 3:+79656706 None:intergenic
ACTTCACGGTTATTGCTGCT+CGG 0.597944 3:-79658868 MsG0380016151.01.T01:CDS
TAGAGTTATGGCTCAATACA+GGG 0.601359 3:-79656548 MsG0380016151.01.T01:CDS
CACCCACAATGAAAGTTCGA+AGG 0.602481 3:-79656573 MsG0380016151.01.T01:CDS
AATAGTTATAGCTCAAACAC+AGG 0.603943 3:-79656471 MsG0380016151.01.T01:three_prime_UTR
ATTGATGAAGGGGTACTACA+AGG 0.604460 3:-79658132 MsG0380016151.01.T01:intron
AGGGGCCCACAATTGATGAA+GGG 0.605207 3:-79658143 MsG0380016151.01.T01:CDS
TGGCTGAATACTGGTGACAT+AGG 0.606118 3:-79657693 MsG0380016151.01.T01:CDS
GGAACAGAAACCATTAAATG+TGG 0.615318 3:+79659867 None:intergenic
AATCGGGTCATTGATAGGGA+TGG 0.615967 3:-79657717 MsG0380016151.01.T01:CDS
GGGGCCCACAATTGATGAAG+GGG 0.617435 3:-79658142 MsG0380016151.01.T01:CDS
CTGGCCACCATTCAATTGGG+CGG 0.620753 3:-79657662 MsG0380016151.01.T01:CDS
CAGTAGGTACAACGTCCGAT+AGG 0.622532 3:+79660136 None:intergenic
GGGCGGAGTCGTAATTCTGG+TGG 0.625225 3:-79657645 MsG0380016151.01.T01:CDS
ACCCACAATGAAAGTTCGAA+GGG 0.626647 3:-79656572 MsG0380016151.01.T01:CDS
ATGGTATAACTGTTATCACT+TGG 0.633138 3:+79656389 None:intergenic
GAAGGTGAAAATGTTGAACC+GGG 0.643368 3:-79657322 MsG0380016151.01.T01:CDS
TCTTCATATGCATGCCAAGG+AGG 0.671081 3:+79660084 None:intergenic
GACTCCGCCCAATTGAATGG+TGG 0.673251 3:+79657658 None:intergenic
AGCTTGAAGAAGCTGCCATG+AGG 0.677140 3:-79657297 MsG0380016151.01.T01:CDS
GTAAAATTACCTAATGCCAG+TGG 0.718488 3:-79656426 MsG0380016151.01.T01:three_prime_UTR
TCTACCTGATGAAAGCACAA+TGG 0.784956 3:+79657590 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATGTAAATAATATAAAGA+TGG + Chr3:79660014-79660033 None:intergenic 10.0%
!! TTGAAAAGAAAAATTTATTA+AGG + Chr3:79658213-79658232 None:intergenic 10.0%
!!! AATTTTGTACAATATTTTAT+AGG - Chr3:79657185-79657204 MsG0380016151.01.T01:intron 10.0%
!!! ATTTTGTACAATATTTTATA+GGG - Chr3:79657186-79657205 MsG0380016151.01.T01:intron 10.0%
!!! ATTTTTTTAAAATACTATAC+AGG - Chr3:79657735-79657754 MsG0380016151.01.T01:CDS 10.0%
!! TTGTACAAAATTATTAACAT+TGG + Chr3:79657177-79657196 None:intergenic 15.0%
!!! AATATTTTGCAATTAACTTA+CGG - Chr3:79659169-79659188 MsG0380016151.01.T01:intron 15.0%
!!! ATTATTTGTTATTTGGAAAT+GGG - Chr3:79657548-79657567 MsG0380016151.01.T01:intron 15.0%
!!! ATTTTTAATCTAATTGTACT+TGG + Chr3:79657874-79657893 None:intergenic 15.0%
!! ACATGATTATTACTTTCATA+AGG + Chr3:79659313-79659332 None:intergenic 20.0%
!! ACTCTCAATAATTTAATTAG+AGG + Chr3:79659816-79659835 None:intergenic 20.0%
!! ATACAGTTTATATTATACGT+AGG + Chr3:79659474-79659493 None:intergenic 20.0%
!! TAGTTCATTATATATTAGAC+TGG + Chr3:79659656-79659675 None:intergenic 20.0%
!! TATTACTAATCTAACTATTG+TGG + Chr3:79660306-79660325 None:intergenic 20.0%
!!! ATAGTGCATTATTTGTTATT+TGG - Chr3:79657541-79657560 MsG0380016151.01.T01:intron 20.0%
!!! CATTATTTGTTATTTGGAAA+TGG - Chr3:79657547-79657566 MsG0380016151.01.T01:intron 20.0%
!!! CTTTGAATTCTATCTTTTAT+AGG - Chr3:79658396-79658415 MsG0380016151.01.T01:intron 20.0%
!!! GTAACATTTGTTTTTGTTTT+TGG - Chr3:79656912-79656931 MsG0380016151.01.T01:intron 20.0%
!!! TATAATGACAGATTGATAAT+GGG - Chr3:79660064-79660083 MsG0380016151.01.T01:CDS 20.0%
!!! TTATTTGTTATTTGGAAATG+GGG - Chr3:79657549-79657568 MsG0380016151.01.T01:intron 20.0%
!!! TTCTATCTTTTATAGGTAAT+TGG - Chr3:79658403-79658422 MsG0380016151.01.T01:intron 20.0%
! AAAAACATACAACAAGTTAG+AGG + Chr3:79660360-79660379 None:intergenic 25.0%
! AAAAATCGTAACAATTTCGT+TGG - Chr3:79658625-79658644 MsG0380016151.01.T01:intron 25.0%
! AACATATGATGTAGAATAGA+TGG + Chr3:79658243-79658262 None:intergenic 25.0%
! AGAGATATCATGATATAAAC+CGG - Chr3:79658062-79658081 MsG0380016151.01.T01:intron 25.0%
! ATAAACCATAGTTGCAATTA+AGG + Chr3:79659254-79659273 None:intergenic 25.0%
! ATACAACAAATTGTTGTCAT+TGG - Chr3:79659402-79659421 MsG0380016151.01.T01:intron 25.0%
! ATGCAATGATTTCACTTATT+TGG - Chr3:79659508-79659527 MsG0380016151.01.T01:intron 25.0%
! ATTTGGACATATAGGATAAA+CGG - Chr3:79659525-79659544 MsG0380016151.01.T01:intron 25.0%
! CATGATAAAACATGTAAAGT+AGG + Chr3:79657139-79657158 None:intergenic 25.0%
! CTATAATGACAGATTGATAA+TGG - Chr3:79660063-79660082 MsG0380016151.01.T01:CDS 25.0%
! GTACAAAGTTTCAAAACTAA+AGG + Chr3:79656824-79656843 None:intergenic 25.0%
! TAAAATACTATACAGGCTAT+TGG - Chr3:79657742-79657761 MsG0380016151.01.T01:intron 25.0%
! TAAACCATAGTTGCAATTAA+GGG + Chr3:79659253-79659272 None:intergenic 25.0%
! TAATCTAACTATTGTGGTAA+TGG + Chr3:79660300-79660319 None:intergenic 25.0%
! TATATAATGAACTAAAGACC+TGG - Chr3:79659662-79659681 MsG0380016151.01.T01:intron 25.0%
! TGTAGAGAATAACAATTACT+AGG - Chr3:79658129-79658148 MsG0380016151.01.T01:intron 25.0%
! TTTCACTTATTTGGACATAT+AGG - Chr3:79659517-79659536 MsG0380016151.01.T01:intron 25.0%
!! ATTCTCTACATTTTATCACA+TGG + Chr3:79658119-79658138 None:intergenic 25.0%
!! CATGTACTATATTTTGTTCT+AGG - Chr3:79656757-79656776 MsG0380016151.01.T01:intron 25.0%
!! CTACTTTACATGTTTTATCA+TGG - Chr3:79657137-79657156 MsG0380016151.01.T01:intron 25.0%
!! TCAAGTATTTATAAGGTATC+TGG + Chr3:79658708-79658727 None:intergenic 25.0%
!! TTAGGTAATTTTACTGGTAT+AGG + Chr3:79660235-79660254 None:intergenic 25.0%
!! TTTATCACATGGTAGATTTT+AGG + Chr3:79658108-79658127 None:intergenic 25.0%
!!! AAGAGTTACTTTCCATTTTT+CGG - Chr3:79659226-79659245 MsG0380016151.01.T01:intron 25.0%
!!! ATATTTTAAACCTTCATGCA+TGG - Chr3:79656689-79656708 MsG0380016151.01.T01:intron 25.0%
!!! ATTTTGTTCTAGGATGATTT+GGG - Chr3:79656767-79656786 MsG0380016151.01.T01:intron 25.0%
!!! CATTTTTGTTATTCTCAAAC+AGG - Chr3:79657684-79657703 MsG0380016151.01.T01:CDS 25.0%
!!! GCTTTAAAAATTTTGGTTCA+AGG - Chr3:79659448-79659467 MsG0380016151.01.T01:intron 25.0%
!!! GTTTTGTTAAGAAATCAGAA+AGG - Chr3:79658151-79658170 MsG0380016151.01.T01:CDS 25.0%
!!! TAATTTGTTTTGTTCAGCTT+TGG + Chr3:79657104-79657123 None:intergenic 25.0%
!!! TATTTGTTATTTGGAAATGG+GGG - Chr3:79657550-79657569 MsG0380016151.01.T01:intron 25.0%
!!! TATTTTGTTCTAGGATGATT+TGG - Chr3:79656766-79656785 MsG0380016151.01.T01:intron 25.0%
!!! TTAGTTTTGAAACTTTGTAC+AGG - Chr3:79656824-79656843 MsG0380016151.01.T01:intron 25.0%
AAAAACTTGTCAACATGAGA+AGG + Chr3:79657648-79657667 None:intergenic 30.0%
AAATCAGAAAGGCTAAATGA+TGG - Chr3:79658162-79658181 MsG0380016151.01.T01:CDS 30.0%
AAGATCATAGAACTCTTGTA+AGG - Chr3:79656433-79656452 MsG0380016151.01.T01:three_prime_UTR 30.0%
AATAGTTATAGCTCAAACAC+AGG - Chr3:79660196-79660215 MsG0380016151.01.T01:intron 30.0%
ACGTTATAAGCCACATTTAA+TGG - Chr3:79656790-79656809 MsG0380016151.01.T01:intron 30.0%
ACTACAAGGTAAAATAGTCT+TGG - Chr3:79658549-79658568 MsG0380016151.01.T01:intron 30.0%
ACTTGTATAGATTCTCTATC+TGG + Chr3:79660146-79660165 None:intergenic 30.0%
AGTAAAATCCGTTCAACTAT+TGG - Chr3:79657332-79657351 MsG0380016151.01.T01:intron 30.0%
ATCTGTCATAAACTTTACTG+TGG - Chr3:79656364-79656383 MsG0380016151.01.T01:three_prime_UTR 30.0%
ATGGTATAACTGTTATCACT+TGG + Chr3:79660281-79660300 None:intergenic 30.0%
ATGGTTTAACAGAAACTTCA+CGG - Chr3:79657785-79657804 MsG0380016151.01.T01:intron 30.0%
ATTATATCCAGTTCATATGC+TGG - Chr3:79657292-79657311 MsG0380016151.01.T01:CDS 30.0%
CAAATGTTACTATTCACAAG+TGG + Chr3:79656902-79656921 None:intergenic 30.0%
CATTACAGAATTGACGTATT+TGG - Chr3:79660029-79660048 MsG0380016151.01.T01:intron 30.0%
CCAGTCTTCAAGTATTTATA+AGG + Chr3:79658715-79658734 None:intergenic 30.0%
CCTTATAAATACTTGAAGAC+TGG - Chr3:79658712-79658731 MsG0380016151.01.T01:intron 30.0%
CTAACAAAGAAGAAGTCTTA+AGG - Chr3:79659570-79659589 MsG0380016151.01.T01:intron 30.0%
CTGGAACAAGGAATTATAAA+AGG - Chr3:79658731-79658750 MsG0380016151.01.T01:intron 30.0%
CTTAAGACTTCTTCTTTGTT+AGG + Chr3:79659572-79659591 None:intergenic 30.0%
GGTAGAATATTTAAGTAACC+TGG - Chr3:79657972-79657991 MsG0380016151.01.T01:intron 30.0%
GTAAAATCCGTTCAACTATT+GGG - Chr3:79657333-79657352 MsG0380016151.01.T01:intron 30.0%
TCACAATAATTTGAAGAGTG+TGG + Chr3:79657491-79657510 None:intergenic 30.0%
TCATATGCTGGCAAATAAAT+TGG - Chr3:79657304-79657323 MsG0380016151.01.T01:CDS 30.0%
TCTTGTAAGGCTATGATTAT+TGG - Chr3:79656446-79656465 MsG0380016151.01.T01:three_prime_UTR 30.0%
TGAAACTAAATACAAGGCTA+GGG - Chr3:79659835-79659854 MsG0380016151.01.T01:intron 30.0%
TGAGAGTGAAACTAAATACA+AGG - Chr3:79659829-79659848 MsG0380016151.01.T01:intron 30.0%
TGTAACATACCATTGACATT+AGG + Chr3:79660176-79660195 None:intergenic 30.0%
TGTAACTTACACACTTTGAT+CGG + Chr3:79658896-79658915 None:intergenic 30.0%
TTAACTCAACATCACATAAC+CGG + Chr3:79658084-79658103 None:intergenic 30.0%
TTATAGGTAATTGGATCTGT+GGG - Chr3:79658412-79658431 MsG0380016151.01.T01:intron 30.0%
TTCAACTATTGGGATATCAA+CGG - Chr3:79657343-79657362 MsG0380016151.01.T01:intron 30.0%
TTCATACAATTCCTGAGAAA+AGG + Chr3:79656855-79656874 None:intergenic 30.0%
TTGAATTCTGTATGCTTAAG+TGG + Chr3:79658443-79658462 None:intergenic 30.0%
TTGAATTTGCAGAATGGATA+TGG - Chr3:79657766-79657785 MsG0380016151.01.T01:intron 30.0%
TTGATATCCCAATAGTTGAA+CGG + Chr3:79657343-79657362 None:intergenic 30.0%
TTTATAGGTAATTGGATCTG+TGG - Chr3:79658411-79658430 MsG0380016151.01.T01:intron 30.0%
TTTCTAGATCAAACACCTAT+CGG - Chr3:79656516-79656535 MsG0380016151.01.T01:exon 30.0%
!! AAAGGGAATTTTGAAAGTCA+GGG - Chr3:79658505-79658524 MsG0380016151.01.T01:intron 30.0%
!! AAAGTTGTAGATTCTGAAAC+TGG - Chr3:79658461-79658480 MsG0380016151.01.T01:intron 30.0%
!! ATTGGTTTGAATTTGCAGAA+TGG - Chr3:79657760-79657779 MsG0380016151.01.T01:intron 30.0%
!! TGACAACAATTTGTTGTATG+AGG + Chr3:79659401-79659420 None:intergenic 30.0%
!!! CGATTTTTTCATATACACAC+TGG + Chr3:79658613-79658632 None:intergenic 30.0%
!!! CTTGACGGCTTTAAAAATTT+TGG - Chr3:79659441-79659460 MsG0380016151.01.T01:intron 30.0%
!!! TCATGTTGACAAGTTTTTTG+AGG - Chr3:79657650-79657669 MsG0380016151.01.T01:CDS 30.0%
AAACTAAATACAAGGCTAGG+GGG - Chr3:79659837-79659856 MsG0380016151.01.T01:intron 35.0%
AACATTGCATAGAGATAGGA+AGG + Chr3:79657239-79657258 None:intergenic 35.0%
AAGTAAGACAAGATCTTACC+AGG + Chr3:79659683-79659702 None:intergenic 35.0%
AATACTTGAAGACTGGAACA+AGG - Chr3:79658719-79658738 MsG0380016151.01.T01:intron 35.0%
ACAAATTGTTGTCATTGGTC+AGG - Chr3:79659407-79659426 MsG0380016151.01.T01:intron 35.0%
ACATACCATTGACATTAGGT+TGG + Chr3:79660172-79660191 None:intergenic 35.0%
AGAAGGTGAAAATGTTGAAC+CGG - Chr3:79659344-79659363 MsG0380016151.01.T01:intron 35.0%
AGAATCCTTCAGCTACAAAT+CGG - Chr3:79658933-79658952 MsG0380016151.01.T01:intron 35.0%
AGATCTTGTCTTACTTCTGT+TGG - Chr3:79659687-79659706 MsG0380016151.01.T01:intron 35.0%
ATAGAGACTTGGGTATTATG+GGG - Chr3:79657913-79657932 MsG0380016151.01.T01:intron 35.0%
ATAGAGTTATGGCTCAATAC+AGG - Chr3:79660118-79660137 MsG0380016151.01.T01:CDS 35.0%
ATCCAACATTGCATAGAGAT+AGG + Chr3:79657243-79657262 None:intergenic 35.0%
ATCTCTATGCAATGTTGGAT+TGG - Chr3:79657243-79657262 MsG0380016151.01.T01:intron 35.0%
ATGCTTAATCTAACCGTGAA+GGG + Chr3:79659980-79659999 None:intergenic 35.0%
CAAAAGTTGCTTGTTCATCA+AGG + Chr3:79658796-79658815 None:intergenic 35.0%
CAATAGTTCAGATGTTAGTC+AGG - Chr3:79659621-79659640 MsG0380016151.01.T01:intron 35.0%
CACTACTGTAAGAAACTTGA+AGG - Chr3:79656650-79656669 MsG0380016151.01.T01:intron 35.0%
CAGGTGAGTTTAAATCTTGA+CGG - Chr3:79659426-79659445 MsG0380016151.01.T01:intron 35.0%
CTGACTAACATCTGAACTAT+TGG + Chr3:79659623-79659642 None:intergenic 35.0%
CTGATGCAAAAGATTCTGAT+GGG + Chr3:79656332-79656351 None:intergenic 35.0%
GAAACTAAATACAAGGCTAG+GGG - Chr3:79659836-79659855 MsG0380016151.01.T01:intron 35.0%
GATAGAGACTTGGGTATTAT+GGG - Chr3:79657912-79657931 MsG0380016151.01.T01:intron 35.0%
GGAACAGAAACCATTAAATG+TGG + Chr3:79656803-79656822 None:intergenic 35.0%
GTAAAATTACCTAATGCCAG+TGG - Chr3:79660241-79660260 MsG0380016151.01.T01:intron 35.0%
GTAAACCAACCTAATGTCAA+TGG - Chr3:79660164-79660183 MsG0380016151.01.T01:intron 35.0%
GTGAAACTAAATACAAGGCT+AGG - Chr3:79659834-79659853 MsG0380016151.01.T01:intron 35.0%
TACAAATCGGGTCATTGATA+GGG - Chr3:79658946-79658965 MsG0380016151.01.T01:intron 35.0%
TAGAGTTATGGCTCAATACA+GGG - Chr3:79660119-79660138 MsG0380016151.01.T01:CDS 35.0%
TATAGGTAATTGGATCTGTG+GGG - Chr3:79658413-79658432 MsG0380016151.01.T01:intron 35.0%
TATCCCATACTACACCATTT+GGG + Chr3:79657949-79657968 None:intergenic 35.0%
TATGCCATAAAGAACACTCA+TGG - Chr3:79656717-79656736 MsG0380016151.01.T01:CDS 35.0%
TCAGTTAAAGTTTGCGTGAA+TGG - Chr3:79659768-79659787 MsG0380016151.01.T01:intron 35.0%
TCATGTGTTTCAACATGAGA+AGG - Chr3:79659327-79659346 MsG0380016151.01.T01:intron 35.0%
TGATAGAGACTTGGGTATTA+TGG - Chr3:79657911-79657930 MsG0380016151.01.T01:intron 35.0%
TTAAAAGCAAGCTATCGAAG+AGG + Chr3:79658003-79658022 None:intergenic 35.0%
TTAGAAGATAGCCGAAAAGA+AGG + Chr3:79657712-79657731 None:intergenic 35.0%
TTATTTGCCAGCATATGAAC+TGG + Chr3:79657302-79657321 None:intergenic 35.0%
TTCAAAATTCCCTTTGAACC+AGG + Chr3:79658500-79658519 None:intergenic 35.0%
TTCCTATCTCTATGCAATGT+TGG - Chr3:79657238-79657257 MsG0380016151.01.T01:intron 35.0%
TTGCTTGTTCATCAAGGAAA+AGG + Chr3:79658790-79658809 None:intergenic 35.0%
! CTGGCATTAGGTAATTTTAC+TGG + Chr3:79660241-79660260 None:intergenic 35.0%
! GAGTATTTCATTTTCTCACG+TGG - Chr3:79656612-79656631 MsG0380016151.01.T01:intron 35.0%
! GCTAAATGATGGTTCTACTT+AGG - Chr3:79658173-79658192 MsG0380016151.01.T01:CDS 35.0%
! TCAAACAGGAACCTTCTTTT+CGG - Chr3:79657698-79657717 MsG0380016151.01.T01:CDS 35.0%
!! AAGGGAATTTTGAAAGTCAG+GGG - Chr3:79658506-79658525 MsG0380016151.01.T01:intron 35.0%
!! CAAAGGGAATTTTGAAAGTC+AGG - Chr3:79658504-79658523 MsG0380016151.01.T01:intron 35.0%
!! TGTTGGTGATTGTGTTTACA+AGG - Chr3:79659704-79659723 MsG0380016151.01.T01:intron 35.0%
!!! CTTCGATAGCTTGCTTTTAA+GGG - Chr3:79658003-79658022 MsG0380016151.01.T01:intron 35.0%
!!! TCTTCGATAGCTTGCTTTTA+AGG - Chr3:79658002-79658021 MsG0380016151.01.T01:intron 35.0%
!!! TGTGTATGTTGCTTTTCATG+TGG - Chr3:79659109-79659128 MsG0380016151.01.T01:intron 35.0%
AAAATTCCCTTTGAACCAGG+TGG + Chr3:79658497-79658516 None:intergenic 40.0%
AACTAAATACAAGGCTAGGG+GGG - Chr3:79659838-79659857 MsG0380016151.01.T01:intron 40.0%
AAGTCCCAAATGGTGTAGTA+TGG - Chr3:79657942-79657961 MsG0380016151.01.T01:intron 40.0%
AATCTATCTCCAGCTTCAGT+AGG + Chr3:79656550-79656569 None:intergenic 40.0%
ACATTCATAAGGGTCAGCTT+AGG - Chr3:79657000-79657019 MsG0380016151.01.T01:intron 40.0%
ACCCACAATGAAAGTTCGAA+GGG - Chr3:79660095-79660114 MsG0380016151.01.T01:CDS 40.0%
ACCTTCATGTGATAGAGACT+TGG - Chr3:79657902-79657921 MsG0380016151.01.T01:intron 40.0%
AGCTCAAACACAGGATCAAA+TGG - Chr3:79660205-79660224 MsG0380016151.01.T01:intron 40.0%
AGTACCCCTTCATCAATTGT+GGG + Chr3:79658532-79658551 None:intergenic 40.0%
AGTCCCAAATGGTGTAGTAT+GGG - Chr3:79657943-79657962 MsG0380016151.01.T01:intron 40.0%
AGTTCGAAGGGATAGAGTTA+TGG - Chr3:79660107-79660126 MsG0380016151.01.T01:CDS 40.0%
ATAGGTAATTGGATCTGTGG+GGG - Chr3:79658414-79658433 MsG0380016151.01.T01:intron 40.0%
ATATAGGATAAACGGCGTCT+AGG - Chr3:79659533-79659552 MsG0380016151.01.T01:intron 40.0%
ATCCCTTCGAACTTTCATTG+TGG + Chr3:79660100-79660119 None:intergenic 40.0%
ATGGTGTAGTATGGGATACT+CGG - Chr3:79657951-79657970 MsG0380016151.01.T01:intron 40.0%
CAGGGTTTCCATTTCAGATT+GGG - Chr3:79659933-79659952 MsG0380016151.01.T01:intron 40.0%
CATAGAAAGCCTGTTGTCAT+TGG - Chr3:79659279-79659298 MsG0380016151.01.T01:intron 40.0%
CCTGATGCAAAAGATTCTGA+TGG + Chr3:79656333-79656352 None:intergenic 40.0%
CCTTCATGTGATAGAGACTT+GGG - Chr3:79657903-79657922 MsG0380016151.01.T01:intron 40.0%
CTACAAATCGGGTCATTGAT+AGG - Chr3:79658945-79658964 MsG0380016151.01.T01:intron 40.0%
GAAGCCATGAGTGTTCTTTA+TGG + Chr3:79656724-79656743 None:intergenic 40.0%
GAAGGTGAAAATGTTGAACC+GGG - Chr3:79659345-79659364 MsG0380016151.01.T01:intron 40.0%
GAATCCTTCAGCTACAAATC+GGG - Chr3:79658934-79658953 MsG0380016151.01.T01:intron 40.0%
GAGAAAGAACCAATGACAAC+AGG + Chr3:79659291-79659310 None:intergenic 40.0%
GATGCTTAATCTAACCGTGA+AGG + Chr3:79659981-79660000 None:intergenic 40.0%
GCAATTAAGGGTCCGAAAAA+TGG + Chr3:79659241-79659260 None:intergenic 40.0%
GGAAGGTGATTTCTGATTCT+TGG + Chr3:79657222-79657241 None:intergenic 40.0%
GGAGTGTAAGCGAATTTATG+AGG - Chr3:79657029-79657048 MsG0380016151.01.T01:intron 40.0%
GGATCATTTACGAGAAGGAT+TGG + Chr3:79659959-79659978 None:intergenic 40.0%
GGTACTACTGGAAATCCTAA+AGG - Chr3:79656295-79656314 MsG0380016151.01.T01:three_prime_UTR 40.0%
GGTGATTGTGTTTACAAGGA+GGG - Chr3:79659708-79659727 MsG0380016151.01.T01:intron 40.0%
GTAAGCGAATTTATGAGGTC+TGG - Chr3:79657034-79657053 MsG0380016151.01.T01:intron 40.0%
GTATCCCATACTACACCATT+TGG + Chr3:79657950-79657969 None:intergenic 40.0%
GTGATTGTGTTTACAAGGAG+GGG - Chr3:79659709-79659728 MsG0380016151.01.T01:intron 40.0%
TAAGACAGAGATCGGGAAAA+AGG + Chr3:79658285-79658304 None:intergenic 40.0%
TAGTACCCCTTCATCAATTG+TGG + Chr3:79658533-79658552 None:intergenic 40.0%
TCAGGGTTTCCATTTCAGAT+TGG - Chr3:79659932-79659951 MsG0380016151.01.T01:intron 40.0%
TCCCTTCGAACTTTCATTGT+GGG + Chr3:79660099-79660118 None:intergenic 40.0%
TCTCGTAAATGATCCCTTCA+CGG - Chr3:79659964-79659983 MsG0380016151.01.T01:intron 40.0%
TGAAGGGATCATTTACGAGA+AGG + Chr3:79659964-79659983 None:intergenic 40.0%
TGAATACTGGTGACATAGGT+TGG - Chr3:79658978-79658997 MsG0380016151.01.T01:intron 40.0%
TGAGAAATATCCAATCCTCG+AGG + Chr3:79658035-79658054 None:intergenic 40.0%
TGGTGATTGTGTTTACAAGG+AGG - Chr3:79659707-79659726 MsG0380016151.01.T01:intron 40.0%
TGTCGCTCTCACATTCATAA+GGG - Chr3:79656990-79657009 MsG0380016151.01.T01:intron 40.0%
TTCTAAGTATGTTGCCTCCT+TGG - Chr3:79656569-79656588 MsG0380016151.01.T01:CDS 40.0%
TTGGCTATGGGCAAGAATTA+TGG - Chr3:79657262-79657281 MsG0380016151.01.T01:CDS 40.0%
TTGTATGAGGTTACTCCTCA+TGG + Chr3:79659388-79659407 None:intergenic 40.0%
TTGTCGCTCTCACATTCATA+AGG - Chr3:79656989-79657008 MsG0380016151.01.T01:intron 40.0%
! CAAAAACTTTTGCACTCTGC+AGG - Chr3:79657596-79657615 MsG0380016151.01.T01:CDS 40.0%
! CCATCAGAATCTTTTGCATC+AGG - Chr3:79656330-79656349 MsG0380016151.01.T01:three_prime_UTR 40.0%
! TACAGGTAACTCCTTTTCTC+AGG - Chr3:79656841-79656860 MsG0380016151.01.T01:intron 40.0%
! TCTACCTGATGAAAGCACAA+TGG + Chr3:79659080-79659099 None:intergenic 40.0%
! TGAACAAGCAACTTTTGCGA+TGG - Chr3:79658799-79658818 MsG0380016151.01.T01:intron 40.0%
! TGATGGTTCTACTTAGGTGT+TGG - Chr3:79658179-79658198 MsG0380016151.01.T01:CDS 40.0%
!! AAACCTCTAAGACAGAGATC+GGG + Chr3:79658292-79658311 None:intergenic 40.0%
!! ATGCAATGTTGGATTGGCTA+TGG - Chr3:79657249-79657268 MsG0380016151.01.T01:intron 40.0%
!! ATTGATGAAGGGGTACTACA+AGG - Chr3:79658535-79658554 MsG0380016151.01.T01:intron 40.0%
!! CAAACCTCTAAGACAGAGAT+CGG + Chr3:79658293-79658312 None:intergenic 40.0%
!! TGCAATGTTGGATTGGCTAT+GGG - Chr3:79657250-79657269 MsG0380016151.01.T01:intron 40.0%
!! TGGGTTAGCATAACACCTTT+AGG + Chr3:79656313-79656332 None:intergenic 40.0%
!!! GATAGCTTGCTTTTAAGGGA+GGG - Chr3:79658007-79658026 MsG0380016151.01.T01:intron 40.0%
!!! TGTTTTTGGTTCCTCTGTAG+TGG - Chr3:79656926-79656945 MsG0380016151.01.T01:intron 40.0%
AAGGGTCAGCTTAGGATACA+TGG - Chr3:79657008-79657027 MsG0380016151.01.T01:intron 45.0%
AATCGGGTCATTGATAGGGA+TGG - Chr3:79658950-79658969 MsG0380016151.01.T01:intron 45.0%
ACTTCACGGTTATTGCTGCT+CGG - Chr3:79657799-79657818 MsG0380016151.01.T01:intron 45.0%
AGCTCTTCATATGCATGCCA+AGG + Chr3:79656589-79656608 None:intergenic 45.0%
AGTTCTTCCACCTGGTTCAA+AGG - Chr3:79658487-79658506 MsG0380016151.01.T01:intron 45.0%
ATCACTTCCCATTATCGTGC+AGG - Chr3:79659906-79659925 MsG0380016151.01.T01:intron 45.0%
ATTGCTGGCCACCATTCAAT+TGG - Chr3:79659001-79659020 MsG0380016151.01.T01:intron 45.0%
CACCCACAATGAAAGTTCGA+AGG - Chr3:79660094-79660113 MsG0380016151.01.T01:CDS 45.0%
CATGAGTAAATAAGACCCCG+TGG + Chr3:79658873-79658892 None:intergenic 45.0%
CATTATCGTGCAGGACATCA+GGG - Chr3:79659915-79659934 MsG0380016151.01.T01:intron 45.0%
CCCAAGTCTCTATCACATGA+AGG + Chr3:79657906-79657925 None:intergenic 45.0%
CGGACCCTTAATTGCAACTA+TGG - Chr3:79659246-79659265 MsG0380016151.01.T01:intron 45.0%
CTCACATCACATTCATCCAC+GGG - Chr3:79658854-79658873 MsG0380016151.01.T01:CDS 45.0%
CTGATGTCCTGCACGATAAT+GGG + Chr3:79659916-79659935 None:intergenic 45.0%
GACACCATTGTGCTTTCATC+AGG - Chr3:79659073-79659092 MsG0380016151.01.T01:intron 45.0%
GCATACAGTACCATGCATGA+AGG + Chr3:79656702-79656721 None:intergenic 45.0%
GCTACTCTTGTGTACACAAG+TGG - Chr3:79656274-79656293 MsG0380016151.01.T01:three_prime_UTR 45.0%
GCTATCGAAGAGGAATAACC+AGG + Chr3:79657993-79658012 None:intergenic 45.0%
GCTCACATCACATTCATCCA+CGG - Chr3:79658853-79658872 MsG0380016151.01.T01:CDS 45.0%
GTGTACACAAGTGGTACTAC+TGG - Chr3:79656283-79656302 MsG0380016151.01.T01:three_prime_UTR 45.0%
GTTCTTCCACCTGGTTCAAA+GGG - Chr3:79658488-79658507 MsG0380016151.01.T01:intron 45.0%
GTTGAGAGGCAAAACGTCTT+GGG - Chr3:79657456-79657475 MsG0380016151.01.T01:intron 45.0%
TCACATCACATTCATCCACG+GGG - Chr3:79658855-79658874 MsG0380016151.01.T01:CDS 45.0%
TCTTCATATGCATGCCAAGG+AGG + Chr3:79656586-79656605 None:intergenic 45.0%
TGCTTCATGATCCACTACAG+AGG + Chr3:79656940-79656959 None:intergenic 45.0%
TGGCTGAATACTGGTGACAT+AGG - Chr3:79658974-79658993 MsG0380016151.01.T01:intron 45.0%
TGTTGAGAGGCAAAACGTCT+TGG - Chr3:79657455-79657474 MsG0380016151.01.T01:intron 45.0%
TTGCTGGCCACCATTCAATT+GGG - Chr3:79659002-79659021 MsG0380016151.01.T01:intron 45.0%
TTTCCCGATCTCTGTCTTAG+AGG - Chr3:79658286-79658305 MsG0380016151.01.T01:intron 45.0%
! ATGACCCGATTTGTAGCTGA+AGG + Chr3:79658941-79658960 None:intergenic 45.0%
! GATTGACTGACTCTGTTGAG+AGG - Chr3:79657442-79657461 MsG0380016151.01.T01:intron 45.0%
! GGTGGTGTGATTGTTGTTGA+AGG - Chr3:79659040-79659059 MsG0380016151.01.T01:intron 45.0%
!! AGGATTGGCCCAATCTGAAA+TGG + Chr3:79659944-79659963 None:intergenic 45.0%
!! GGTTCTACTTAGGTGTTGGT+TGG - Chr3:79658183-79658202 MsG0380016151.01.T01:CDS 45.0%
!!! CGATAGCTTGCTTTTAAGGG+AGG - Chr3:79658006-79658025 MsG0380016151.01.T01:intron 45.0%
ACTGGTGAAGTTCTTCCACC+TGG - Chr3:79658479-79658498 MsG0380016151.01.T01:intron 50.0%
AGCTTGAAGAAGCTGCCATG+AGG - Chr3:79659370-79659389 MsG0380016151.01.T01:intron 50.0%
AGGGGCCCACAATTGATGAA+GGG - Chr3:79658524-79658543 MsG0380016151.01.T01:intron 50.0%
ATTGGGCGGAGTCGTAATTC+TGG - Chr3:79659019-79659038 MsG0380016151.01.T01:intron 50.0%
CAGTAGGTACAACGTCCGAT+AGG + Chr3:79656534-79656553 None:intergenic 50.0%
CCATTATCGTGCAGGACATC+AGG - Chr3:79659914-79659933 MsG0380016151.01.T01:intron 50.0%
CCTGATGTCCTGCACGATAA+TGG + Chr3:79659917-79659936 None:intergenic 50.0%
GACGTTGTACCTACTGAAGC+TGG - Chr3:79656538-79656557 MsG0380016151.01.T01:CDS 50.0%
TACGACTCCGCCCAATTGAA+TGG + Chr3:79659015-79659034 None:intergenic 50.0%
! GGGGGTGTATGAATGGGAAA+CGG - Chr3:79659856-79659875 MsG0380016151.01.T01:CDS 50.0%
! GGTGACATAGGTTGGATTGC+TGG - Chr3:79658986-79659005 MsG0380016151.01.T01:intron 50.0%
! GTCTATGTGCCACTGGCATT+AGG + Chr3:79660253-79660272 None:intergenic 50.0%
!! TTTTAAGGGAGGGTTCCTCG+AGG - Chr3:79658017-79658036 MsG0380016151.01.T01:intron 50.0%
ACTCTGCAGGCTGCAGTAAG+TGG - Chr3:79657609-79657628 MsG0380016151.01.T01:CDS 55.0%
CAGGGGCCCACAATTGATGA+AGG - Chr3:79658523-79658542 MsG0380016151.01.T01:intron 55.0%
CTGGCCACCATTCAATTGGG+CGG - Chr3:79659005-79659024 MsG0380016151.01.T01:intron 55.0%
GACTCCGCCCAATTGAATGG+TGG + Chr3:79659012-79659031 None:intergenic 55.0%
GCAGCTTCTTCAAGCTCTCC+CGG + Chr3:79659366-79659385 None:intergenic 55.0%
GGGGCCCACAATTGATGAAG+GGG - Chr3:79658525-79658544 MsG0380016151.01.T01:intron 55.0%
GGGTCATTGATAGGGATGGC+TGG - Chr3:79658954-79658973 MsG0380016151.01.T01:intron 55.0%
GGTACGAGTCTATGTGCCAC+TGG + Chr3:79660260-79660279 None:intergenic 55.0%
GTTATTGCTGCTCGGCGACT+TGG - Chr3:79657807-79657826 MsG0380016151.01.T01:intron 55.0%
! AGGCTAGGGGGGTGTATGAA+TGG - Chr3:79659849-79659868 MsG0380016151.01.T01:CDS 55.0%
! AGGGATGGCTGGCTGAATAC+TGG - Chr3:79658965-79658984 MsG0380016151.01.T01:intron 55.0%
! GGCTAGGGGGGTGTATGAAT+GGG - Chr3:79659850-79659869 MsG0380016151.01.T01:CDS 55.0%
! GGGGTGCTCAAAGTCCCAAA+TGG - Chr3:79657932-79657951 MsG0380016151.01.T01:intron 55.0%
AGGGAGGGTTCCTCGAGGAT+TGG - Chr3:79658022-79658041 MsG0380016151.01.T01:intron 60.0%
CAGGCTGCAGTAAGTGGTGG+TGG - Chr3:79657615-79657634 MsG0380016151.01.T01:CDS 60.0%
CTGCAGGCTGCAGTAAGTGG+TGG - Chr3:79657612-79657631 MsG0380016151.01.T01:CDS 60.0%
GGGCGGAGTCGTAATTCTGG+TGG - Chr3:79659022-79659041 MsG0380016151.01.T01:intron 60.0%
!! GGGGGCATCACTTTCTGCTC+AGG - Chr3:79657568-79657587 MsG0380016151.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 79656244 79660445 79656244 ID=MsG0380016151.01;Name=MsG0380016151.01
Chr3 mRNA 79656244 79660445 79656244 ID=MsG0380016151.01.T01;Parent=MsG0380016151.01;Name=MsG0380016151.01.T01;_AED=0.45;_eAED=0.45;_QI=0|0.25|0.33|1|1|1|9|278|281
Chr3 exon 79656244 79656614 79656244 ID=MsG0380016151.01.T01:exon:11358;Parent=MsG0380016151.01.T01
Chr3 exon 79656704 79656739 79656704 ID=MsG0380016151.01.T01:exon:11357;Parent=MsG0380016151.01.T01
Chr3 exon 79657261 79657343 79657261 ID=MsG0380016151.01.T01:exon:11356;Parent=MsG0380016151.01.T01
Chr3 exon 79657595 79657754 79657595 ID=MsG0380016151.01.T01:exon:11355;Parent=MsG0380016151.01.T01
Chr3 exon 79658133 79658240 79658133 ID=MsG0380016151.01.T01:exon:11354;Parent=MsG0380016151.01.T01
Chr3 exon 79658853 79658932 79658853 ID=MsG0380016151.01.T01:exon:11353;Parent=MsG0380016151.01.T01
Chr3 exon 79659844 79659910 79659844 ID=MsG0380016151.01.T01:exon:11352;Parent=MsG0380016151.01.T01
Chr3 exon 79660056 79660166 79660056 ID=MsG0380016151.01.T01:exon:11351;Parent=MsG0380016151.01.T01
Chr3 exon 79660338 79660445 79660338 ID=MsG0380016151.01.T01:exon:11350;Parent=MsG0380016151.01.T01
Chr3 CDS 79660338 79660445 79660338 ID=MsG0380016151.01.T01:cds;Parent=MsG0380016151.01.T01
Chr3 CDS 79660056 79660166 79660056 ID=MsG0380016151.01.T01:cds;Parent=MsG0380016151.01.T01
Chr3 CDS 79659844 79659910 79659844 ID=MsG0380016151.01.T01:cds;Parent=MsG0380016151.01.T01
Chr3 CDS 79658853 79658932 79658853 ID=MsG0380016151.01.T01:cds;Parent=MsG0380016151.01.T01
Chr3 CDS 79658133 79658240 79658133 ID=MsG0380016151.01.T01:cds;Parent=MsG0380016151.01.T01
Chr3 CDS 79657595 79657754 79657595 ID=MsG0380016151.01.T01:cds;Parent=MsG0380016151.01.T01
Chr3 CDS 79657261 79657343 79657261 ID=MsG0380016151.01.T01:cds;Parent=MsG0380016151.01.T01
Chr3 CDS 79656704 79656739 79656704 ID=MsG0380016151.01.T01:cds;Parent=MsG0380016151.01.T01
Chr3 CDS 79656522 79656614 79656522 ID=MsG0380016151.01.T01:cds;Parent=MsG0380016151.01.T01
Chr3 three_prime_UTR 79656244 79656521 79656244 ID=MsG0380016151.01.T01:three_prime_utr;Parent=MsG0380016151.01.T01
Gene Sequence

>MsG0380016151.01.T01

ATGTTTGAAACAATAAAATTGGATGACATTGCTACTCTTGTGTACACAAGTGGTACTACTGGAAATCCTAAAGGTGTTATGCTAACCCATCAGAATCTTTTGCATCAGATCAAACACCTATCGGACGTTGTACCTACTGAAGCTGGAGATAGATTTCTAAGTATGTTGCCTCCTTGGCATGCATATGAAGAGCTTGCGAGTATTTCATTTTCTCACGTGGATGATTTGGGACGTTATAAGCCACATTTAATGGTTTCTGTTCCTTTAGTTTTGAAACTTTGTACAGGCTATTGGTTTGAATTTGCAGAATGGATATGGTTTAACAGAAACTTCACGGTTATTGCTGCTCGGCGACTTGGTTGTGACCATACAGAATTCAAAGTTGTAGATTCTGAAACTGGTGAAGTTCTTCCACCTGGTTCAAAGGGAATTTTGAAAGTCAGGGGCCCACAATTGATGAAGGGGTACTACAAGAATCCTTCAGCTACAAATCGGGTCATTGATAGGGATGGCTGGCTGAATACTGGTGACATAGGTTGGATTGCTGGCCACCATTCAATTGGGCGGAGTCGTAATTCTGGTGGTGTGATTGTTGTTGAAGGTCGTGCTAAAGACACCATTGTGCTTTCATCAGAAGGTGAAAATGTTGAACCGGGAGAGCTTGAAGAAGCTGCCATGAGGAGTAACCTCATACAACAAATTGTTGTCATTGGTCAGATTGGGCCAATCCTTCTCGTAAATGATCCCTTCACGATTGATAATGGGCTAATGACACCCACAATGAAAGTTCGAAGGGATAGAGTTATGGCTCAATACAGGGACCAGATAGAGAATCTATACAAGTAA

Protein sequence

>MsG0380016151.01.T01

MFETIKLDDIATLVYTSGTTGNPKGVMLTHQNLLHQIKHLSDVVPTEAGDRFLSMLPPWHAYEELASISFSHVDDLGRYKPHLMVSVPLVLKLCTGYWFEFAEWIWFNRNFTVIAARRLGCDHTEFKVVDSETGEVLPPGSKGILKVRGPQLMKGYYKNPSATNRVIDRDGWLNTGDIGWIAGHHSIGRSRNSGGVIVVEGRAKDTIVLSSEGENVEPGELEEAAMRSNLIQQIVVIGQIGPILLVNDPFTIDNGLMTPTMKVRRDRVMAQYRDQIENLYK*