AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003268.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003268.01.T01 MTR_1g057460 94.251 574 32 1 1 573 1 574 0.0 1109
MsG0180003268.01.T01 MTR_1g057460 94.235 503 29 0 71 573 1 503 0.0 972
MsG0180003268.01.T01 MTR_0236s0050 93.241 503 34 0 71 573 1 503 0.0 935
MsG0180003268.01.T01 MTR_2g101640 73.555 571 130 6 23 572 1 571 0.0 845
MsG0180003268.01.T01 MTR_2g101610 69.686 574 149 6 23 571 1 574 0.0 804
MsG0180003268.01.T01 MTR_2g101590 69.808 573 149 6 23 571 1 573 0.0 803
MsG0180003268.01.T01 MTR_2g101560 66.783 575 166 5 23 572 1 575 0.0 754
MsG0180003268.01.T01 MTR_4g011280 66.084 572 171 6 19 572 12 578 0.0 749
MsG0180003268.01.T01 MTR_2g101650 56.964 560 221 5 34 573 14 573 0.0 635
MsG0180003268.01.T01 MTR_8g103233 45.946 555 280 8 28 564 2 554 4.70e-169 493
MsG0180003268.01.T01 MTR_1g009200 49.638 552 257 7 41 573 25 574 5.84e-169 493
MsG0180003268.01.T01 MTR_1g026740 45.018 542 276 6 44 566 18 556 1.72e-167 488
MsG0180003268.01.T01 MTR_1g026750 45.961 557 279 7 32 569 7 560 3.72e-161 472
MsG0180003268.01.T01 MTR_1g026770 44.771 545 278 7 44 569 16 556 5.74e-155 456
MsG0180003268.01.T01 MTR_5g038060 34.380 573 340 10 17 563 12 574 4.21e-116 357
MsG0180003268.01.T01 MTR_4g107510 36.607 560 324 11 32 563 25 581 2.72e-115 355
MsG0180003268.01.T01 MTR_4g107580 34.495 574 332 13 23 563 8 570 2.90e-112 347
MsG0180003268.01.T01 MTR_4g107530 36.116 551 323 10 40 563 30 578 8.12e-111 343
MsG0180003268.01.T01 MTR_5g055000 35.701 549 320 12 41 563 16 557 6.84e-109 338
MsG0180003268.01.T01 MTR_8g469480 34.375 544 328 9 46 563 41 581 1.17e-105 330
MsG0180003268.01.T01 MTR_7g088790 32.281 570 347 14 21 563 12 569 1.63e-103 325
MsG0180003268.01.T01 MTR_3g462710 35.398 565 336 12 23 563 1 560 4.77e-103 322
MsG0180003268.01.T01 MTR_7g088825 31.497 581 360 15 23 573 1 573 3.15e-101 319
MsG0180003268.01.T01 MTR_5g038190 31.127 559 355 10 32 563 10 565 4.13e-98 310
MsG0180003268.01.T01 MTR_4g015080 35.359 543 325 11 41 563 32 568 2.08e-96 305
MsG0180003268.01.T01 MTR_7g067010 35.009 557 331 13 25 557 3 552 6.87e-96 304
MsG0180003268.01.T01 MTR_7g088820 30.922 553 348 11 38 563 20 565 1.13e-94 301
MsG0180003268.01.T01 MTR_8g469470 32.486 551 342 11 41 563 30 578 8.05e-94 299
MsG0180003268.01.T01 MTR_3g112460 32.028 562 337 16 20 560 9 546 9.10e-88 283
MsG0180003268.01.T01 MTR_1g009170 39.286 420 183 10 157 565 5 363 4.79e-86 272
MsG0180003268.01.T01 MTR_4g107610 30.686 554 356 12 42 572 30 578 7.78e-86 279
MsG0180003268.01.T01 MTR_3g462710 36.623 456 263 10 129 563 1 451 1.01e-85 274
MsG0180003268.01.T01 MTR_3g112470 31.786 560 341 15 20 560 9 546 2.85e-84 273
MsG0180003268.01.T01 MTR_5g012270 31.907 561 327 16 41 563 26 569 8.52e-83 270
MsG0180003268.01.T01 MTR_7g088820 30.495 505 316 12 86 563 7 503 1.31e-82 268
MsG0180003268.01.T01 MTR_3g005010 31.157 536 333 10 41 563 28 540 1.48e-81 266
MsG0180003268.01.T01 MTR_4g019580 31.746 567 350 15 22 563 12 566 1.88e-81 267
MsG0180003268.01.T01 MTR_4g033315 32.000 550 340 14 31 563 18 550 7.86e-81 264
MsG0180003268.01.T01 MTR_4g033310 32.000 550 340 14 31 563 18 550 7.86e-81 264
MsG0180003268.01.T01 MTR_3g112450 30.637 581 361 15 13 573 2 560 1.71e-80 264
MsG0180003268.01.T01 MTR_3g069500 29.701 569 374 10 9 563 1 557 1.13e-79 262
MsG0180003268.01.T01 MTR_7g064800 29.908 545 355 11 38 557 21 563 3.04e-79 261
MsG0180003268.01.T01 MTR_4g033325 31.541 558 340 12 23 563 16 548 3.57e-79 259
MsG0180003268.01.T01 MTR_7g065080 30.565 566 362 13 17 563 2 555 4.10e-79 260
MsG0180003268.01.T01 MTR_3g014790 32.849 551 327 13 35 560 9 541 7.55e-79 259
MsG0180003268.01.T01 MTR_2g093160 32.793 555 333 14 30 563 9 544 1.23e-78 258
MsG0180003268.01.T01 MTR_7g064780 28.671 572 374 13 9 557 1 561 4.33e-78 258
MsG0180003268.01.T01 MTR_0294s0020 31.115 556 343 12 23 563 16 546 2.34e-77 255
MsG0180003268.01.T01 MTR_3g069440 31.239 557 352 12 29 563 18 565 2.80e-76 253
MsG0180003268.01.T01 MTR_4g033330 31.641 512 317 12 52 548 40 533 6.88e-76 250
MsG0180003268.01.T01 MTR_7g006540 31.957 557 329 15 45 563 65 609 8.75e-76 253
MsG0180003268.01.T01 MTR_2g093180 33.932 557 325 14 30 563 9 545 3.12e-75 249
MsG0180003268.01.T01 MTR_7g088820 31.081 444 279 10 140 563 19 455 7.47e-75 246
MsG0180003268.01.T01 MTR_7g065080 31.458 480 301 11 100 563 1 468 8.54e-75 246
MsG0180003268.01.T01 MTR_2g093640 33.573 557 326 15 30 563 9 544 4.66e-74 246
MsG0180003268.01.T01 MTR_7g005930 30.755 543 345 12 42 563 34 566 7.79e-74 246
MsG0180003268.01.T01 MTR_5g014150 28.201 578 383 12 10 563 16 585 1.74e-73 246
MsG0180003268.01.T01 MTR_3g069420 30.329 577 365 12 12 563 2 566 3.43e-73 245
MsG0180003268.01.T01 MTR_4g114340 31.826 553 355 11 31 565 10 558 3.68e-73 244
MsG0180003268.01.T01 MTR_2g017750 28.901 564 364 12 45 573 36 597 7.33e-73 244
MsG0180003268.01.T01 MTR_1g116930 29.474 570 366 12 13 563 2 554 2.69e-72 242
MsG0180003268.01.T01 MTR_7g098200 29.982 547 340 13 52 573 38 566 1.78e-71 240
MsG0180003268.01.T01 MTR_5g085850 28.952 563 371 10 24 569 9 559 2.77e-71 239
MsG0180003268.01.T01 MTR_7g098200 29.603 554 343 13 52 573 38 576 2.83e-71 240
MsG0180003268.01.T01 MTR_8g038880 31.752 548 335 10 33 557 10 541 5.03e-71 239
MsG0180003268.01.T01 MTR_4g101380 30.175 570 353 16 26 560 8 567 6.95e-71 239
MsG0180003268.01.T01 MTR_5g012290 30.420 572 340 18 32 563 14 567 9.00e-71 238
MsG0180003268.01.T01 MTR_4g033375 31.238 509 321 11 16 509 2 496 1.17e-69 233
MsG0180003268.01.T01 MTR_7g098230 30.075 532 327 14 57 558 40 556 3.15e-69 234
MsG0180003268.01.T01 MTR_8g087810 31.336 584 358 18 25 568 2 582 1.21e-68 233
MsG0180003268.01.T01 MTR_1g085090 28.750 560 372 13 24 569 3 549 1.78e-68 233
MsG0180003268.01.T01 MTR_8g087780 30.662 574 359 15 25 563 2 571 3.11e-68 231
MsG0180003268.01.T01 MTR_7g111260 29.317 556 369 12 28 569 4 549 4.03e-68 231
MsG0180003268.01.T01 MTR_1g075440 29.913 575 354 17 22 563 5 563 7.51e-68 231
MsG0180003268.01.T01 MTR_4g098800 28.447 573 368 17 22 560 5 569 7.59e-68 231
MsG0180003268.01.T01 MTR_3g072300 29.444 540 339 15 52 563 33 558 9.53e-68 230
MsG0180003268.01.T01 MTR_3g100980 30.823 571 345 16 31 569 2 554 1.55e-67 229
MsG0180003268.01.T01 MTR_4g033325 30.719 459 285 9 120 563 10 450 3.49e-67 225
MsG0180003268.01.T01 MTR_7g098040 29.696 559 345 15 42 568 32 574 4.58e-67 229
MsG0180003268.01.T01 MTR_4g098800 29.511 532 343 15 53 560 111 634 7.68e-67 229
MsG0180003268.01.T01 MTR_7g013270 29.487 546 350 13 42 563 89 623 1.84e-66 228
MsG0180003268.01.T01 MTR_7g098160 29.273 550 343 13 42 560 31 565 8.51e-66 225
MsG0180003268.01.T01 MTR_7g098090 28.596 584 358 15 21 560 2 570 1.43e-65 225
MsG0180003268.01.T01 MTR_1g042310 29.494 573 358 18 23 563 3 561 1.47e-65 224
MsG0180003268.01.T01 MTR_4g033395 30.512 508 312 11 26 511 10 498 1.49e-65 222
MsG0180003268.01.T01 MTR_2g005130 28.912 588 376 14 4 573 9 572 7.05e-65 223
MsG0180003268.01.T01 MTR_1g041875 30.055 549 337 16 26 546 11 540 1.24e-64 222
MsG0180003268.01.T01 MTR_4g033385 29.801 453 282 8 128 563 16 449 1.43e-64 218
MsG0180003268.01.T01 MTR_4g033325 30.296 439 274 8 140 563 3 424 4.93e-64 216
MsG0180003268.01.T01 MTR_1g042310 30.189 530 327 15 63 563 2 517 8.96e-64 219
MsG0180003268.01.T01 MTR_1g042310 30.189 530 327 15 63 563 9 524 1.02e-63 219
MsG0180003268.01.T01 MTR_3g100980 29.716 599 343 18 31 569 2 582 2.38e-63 219
MsG0180003268.01.T01 MTR_7g098220 29.583 551 346 10 42 563 28 565 3.65e-63 218
MsG0180003268.01.T01 MTR_7g098180 29.636 577 359 15 17 560 2 564 1.22e-62 217
MsG0180003268.01.T01 MTR_1g041885 29.249 506 322 14 63 546 2 493 3.42e-62 214
MsG0180003268.01.T01 MTR_7g098220 29.490 529 332 9 63 563 6 521 2.84e-61 212
MsG0180003268.01.T01 MTR_1g041815 28.546 571 365 13 22 563 5 561 2.36e-60 211
MsG0180003268.01.T01 MTR_7g010820 28.764 518 333 12 53 541 36 546 8.03e-60 209
MsG0180003268.01.T01 MTR_1g041835 28.371 571 366 14 22 563 5 561 1.76e-59 208
MsG0180003268.01.T01 MTR_4g123537 28.947 570 362 17 13 563 22 567 3.28e-58 205
MsG0180003268.01.T01 MTR_4g107670 27.648 557 349 15 44 562 25 565 5.63e-58 204
MsG0180003268.01.T01 MTR_5g038380 27.397 584 360 16 22 562 6 568 2.04e-56 199
MsG0180003268.01.T01 MTR_7g098200 29.464 448 284 10 145 573 28 462 9.26e-56 196
MsG0180003268.01.T01 MTR_6g008690 28.008 532 328 14 66 566 30 537 3.82e-53 190
MsG0180003268.01.T01 MTR_8g469310 27.240 558 348 15 44 562 27 565 1.11e-52 189
MsG0180003268.01.T01 MTR_4g033310 29.321 324 204 7 252 563 176 486 2.33e-43 162
MsG0180003268.01.T01 MTR_4g033310 37.430 179 108 4 31 208 18 193 7.26e-18 87.0
MsG0180003268.01.T01 MTR_7g098150 27.945 433 273 11 42 450 31 448 3.08e-42 159
MsG0180003268.01.T01 MTR_7g098210 26.054 522 267 13 65 558 4 434 5.29e-40 151
MsG0180003268.01.T01 MTR_7g052600 23.929 560 379 14 15 563 2 525 9.14e-37 144
MsG0180003268.01.T01 MTR_7g051880 25.581 473 302 13 100 557 82 519 2.86e-34 136
MsG0180003268.01.T01 MTR_4g024930 24.632 544 356 17 45 563 38 552 7.12e-34 136
MsG0180003268.01.T01 MTR_7g051830 23.393 560 382 14 15 563 2 525 3.91e-32 130
MsG0180003268.01.T01 MTR_8g091265 41.284 109 58 4 301 405 3 109 2.11e-17 79.7
MsG0180003268.01.T01 MTR_3g065350 30.380 158 106 3 343 497 1 157 3.45e-15 73.9
MsG0180003268.01.T01 MTR_4g033390 31.959 97 61 2 481 572 30 126 1.22e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003268.01.T01 AT1G52190 49.829 584 256 9 12 570 2 573 0.0 589
MsG0180003268.01.T01 AT3G16180 51.761 568 247 11 32 573 9 575 0.0 585
MsG0180003268.01.T01 AT5G11570 38.321 548 251 12 32 564 2 477 1.11e-111 342
MsG0180003268.01.T01 AT1G69870 34.501 571 336 14 32 573 44 605 1.75e-110 343
MsG0180003268.01.T01 AT1G62200 36.300 573 332 14 9 559 20 581 2.46e-107 334
MsG0180003268.01.T01 AT1G68570 34.642 586 346 11 15 573 2 577 3.98e-106 331
MsG0180003268.01.T01 AT5G62680 34.338 597 357 12 8 571 5 599 1.21e-103 325
MsG0180003268.01.T01 AT2G02040 35.501 569 332 16 21 563 19 578 1.57e-103 324
MsG0180003268.01.T01 AT1G62200 34.833 600 333 14 9 559 20 610 2.07e-102 322
MsG0180003268.01.T01 AT1G62200 34.833 600 333 14 9 559 34 624 2.86e-102 322
MsG0180003268.01.T01 AT1G27080 32.554 556 346 12 40 573 11 559 3.58e-102 320
MsG0180003268.01.T01 AT1G18880 33.088 544 336 8 46 563 22 563 9.44e-99 312
MsG0180003268.01.T01 AT3G47960 32.933 583 357 12 11 563 27 605 5.11e-97 309
MsG0180003268.01.T01 AT3G54140 34.432 546 328 13 41 563 22 560 5.53e-97 307
MsG0180003268.01.T01 AT3G54140 34.432 546 328 13 41 563 22 560 5.53e-97 307
MsG0180003268.01.T01 AT1G68570 34.249 546 329 10 55 573 5 547 2.90e-95 302
MsG0180003268.01.T01 AT1G27080 32.443 524 325 12 72 573 1 517 4.56e-94 298
MsG0180003268.01.T01 AT5G01180 33.524 525 326 8 52 557 34 554 5.37e-92 294
MsG0180003268.01.T01 AT5G01180 33.524 525 326 8 52 557 34 554 5.37e-92 294
MsG0180003268.01.T01 AT5G01180 33.524 525 326 8 52 557 34 554 5.37e-92 294
MsG0180003268.01.T01 AT3G45650 33.273 556 328 12 30 563 6 540 7.80e-88 283
MsG0180003268.01.T01 AT5G28470 31.530 536 343 12 41 556 15 546 2.38e-87 281
MsG0180003268.01.T01 AT2G02020 32.532 541 307 13 41 563 40 540 4.16e-86 278
MsG0180003268.01.T01 AT5G28470 31.343 536 342 13 41 556 15 544 1.72e-84 274
MsG0180003268.01.T01 AT3G45650 31.787 582 328 13 30 563 6 566 5.25e-82 268
MsG0180003268.01.T01 AT3G45660 31.429 560 336 13 24 563 8 539 2.09e-80 263
MsG0180003268.01.T01 AT3G45660 31.429 560 336 13 24 563 8 539 2.09e-80 263
MsG0180003268.01.T01 AT3G45710 31.103 553 345 12 30 563 6 541 3.15e-80 263
MsG0180003268.01.T01 AT3G45680 33.094 556 332 13 24 563 8 539 4.03e-80 262
MsG0180003268.01.T01 AT3G45660 31.429 560 336 13 24 563 29 560 4.71e-80 263
MsG0180003268.01.T01 AT3G45720 31.295 556 339 13 24 563 9 537 4.35e-79 259
MsG0180003268.01.T01 AT3G54450 31.041 538 336 9 41 557 10 533 4.39e-79 259
MsG0180003268.01.T01 AT2G26690 32.123 551 353 12 32 565 11 557 5.96e-78 257
MsG0180003268.01.T01 AT1G72125 31.504 565 351 12 20 563 4 553 1.06e-76 253
MsG0180003268.01.T01 AT1G69860 31.769 554 344 13 31 563 6 546 2.94e-76 252
MsG0180003268.01.T01 AT2G26690 31.870 524 338 10 57 565 5 524 3.88e-75 249
MsG0180003268.01.T01 AT3G45700 30.853 551 337 13 30 563 6 529 1.84e-74 247
MsG0180003268.01.T01 AT2G26690 32.171 516 331 10 65 565 1 512 1.94e-74 246
MsG0180003268.01.T01 AT3G53960 28.746 574 374 14 13 563 9 570 3.77e-74 248
MsG0180003268.01.T01 AT5G13400 30.769 559 351 9 45 573 66 618 9.01e-74 247
MsG0180003268.01.T01 AT2G37900 28.421 570 380 15 9 560 1 560 6.02e-73 244
MsG0180003268.01.T01 AT1G22540 31.434 544 330 11 41 563 28 549 5.17e-72 241
MsG0180003268.01.T01 AT1G72130 30.741 540 325 14 41 563 23 530 1.34e-71 239
MsG0180003268.01.T01 AT1G32450 28.049 574 382 12 20 565 13 583 3.37e-71 240
MsG0180003268.01.T01 AT1G22570 30.505 554 338 12 19 544 4 538 2.04e-70 237
MsG0180003268.01.T01 AT2G37900 29.876 482 313 13 94 560 10 481 3.43e-70 234
MsG0180003268.01.T01 AT1G12110 31.028 564 346 15 32 563 14 566 6.65e-70 236
MsG0180003268.01.T01 AT1G22550 29.745 548 341 10 41 563 28 556 1.11e-69 235
MsG0180003268.01.T01 AT2G02020 30.185 540 300 15 41 563 40 519 1.15e-68 231
MsG0180003268.01.T01 AT1G59740 30.139 574 364 15 10 560 12 571 1.88e-68 232
MsG0180003268.01.T01 AT4G21680 28.650 548 355 13 45 563 30 570 6.26e-68 231
MsG0180003268.01.T01 AT5G46050 29.189 555 350 13 21 546 4 544 6.93e-68 231
MsG0180003268.01.T01 AT1G72140 29.188 579 332 15 20 563 16 551 1.73e-67 229
MsG0180003268.01.T01 AT3G21670 29.423 537 350 11 40 558 25 550 3.92e-67 229
MsG0180003268.01.T01 AT1G22570 30.906 508 306 11 63 544 13 501 6.21e-67 226
MsG0180003268.01.T01 AT1G72120 29.982 567 353 13 20 563 4 549 1.34e-66 226
MsG0180003268.01.T01 AT5G46040 29.317 556 348 13 21 546 4 544 1.31e-65 224
MsG0180003268.01.T01 AT1G33440 29.872 549 348 12 39 563 32 567 1.48e-65 225
MsG0180003268.01.T01 AT1G27040 28.877 561 359 11 27 562 6 551 1.04e-63 219
MsG0180003268.01.T01 AT1G27040 28.877 561 359 11 27 562 10 555 1.28e-63 219
MsG0180003268.01.T01 AT2G40460 28.205 546 352 12 52 573 33 562 1.61e-62 216
MsG0180003268.01.T01 AT5G14940 29.358 545 342 13 41 558 5 533 3.21e-62 214
MsG0180003268.01.T01 AT5G19640 29.466 543 341 16 45 565 61 583 3.71e-62 216
MsG0180003268.01.T01 AT1G27040 29.135 532 338 10 55 562 7 523 4.11e-60 208
MsG0180003268.01.T01 AT3G45690 28.801 559 317 16 21 563 3 496 5.15e-57 200
MsG0180003268.01.T01 AT5G46050 30.404 421 265 9 142 546 24 432 1.43e-56 197
MsG0180003268.01.T01 AT3G01350 27.469 557 354 14 41 561 5 547 1.72e-56 199
MsG0180003268.01.T01 AT5G62730 28.196 571 355 18 22 562 34 579 4.87e-55 196
MsG0180003268.01.T01 AT1G72130 31.336 434 256 11 145 563 6 412 1.02e-54 191
MsG0180003268.01.T01 AT1G72130 31.336 434 256 11 145 563 6 412 1.02e-54 191
MsG0180003268.01.T01 AT5G62730 28.624 545 335 17 47 562 1 520 1.36e-53 191
MsG0180003268.01.T01 AT1G69850 27.381 588 364 18 22 562 2 573 2.14e-51 186
MsG0180003268.01.T01 AT3G25260 25.898 529 345 13 44 562 21 512 7.96e-50 180
MsG0180003268.01.T01 AT3G25280 24.901 506 332 13 70 562 48 518 2.01e-40 154
MsG0180003268.01.T01 AT2G38100 24.266 511 341 19 71 563 2 484 3.96e-22 100
MsG0180003268.01.T01 AT2G38100 23.709 523 329 19 71 563 18 500 4.36e-22 100
MsG0180003268.01.T01 AT2G38100 23.709 523 329 19 71 563 24 506 4.53e-22 100

Find 128 sgRNAs with CRISPR-Local

Find 406 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTGTAATAAAACTCATTT+TGG 0.134879 1:+59576750 None:intergenic
GAACAAAGCTTGTGTTATTA+AGG 0.192435 1:-59577272 MsG0180003268.01.T01:CDS
TCCAAGACCCTATTGTTATT+AGG 0.209799 1:+59577700 None:intergenic
CCAAGACCCTATTGTTATTA+GGG 0.240592 1:+59577701 None:intergenic
GAAGATGCACTCAGATTAAT+TGG 0.243982 1:+59582184 None:intergenic
CTAGTTTGTAGTTGGGCTTA+TGG 0.245009 1:-59576512 MsG0180003268.01.T01:CDS
CTAGATAATAGAGTATATTA+AGG 0.272271 1:+59576531 None:intergenic
TTCTTTGCACTGATCGTAAC+TGG 0.278436 1:+59576941 None:intergenic
ATTTGTGACAAAAGCTAATA+TGG 0.279228 1:+59576303 None:intergenic
CAGAAGATAAGAGGAGTATT+TGG 0.290226 1:+59578799 None:intergenic
AGGTTCTGCTGTCAGTTTCC+TGG 0.294557 1:-59578700 MsG0180003268.01.T01:intron
GTATATATCCAAGATCATTT+TGG 0.295506 1:-59577613 MsG0180003268.01.T01:CDS
TTTGGTTGGAAAATTGGTTT+TGG 0.301389 1:-59577595 MsG0180003268.01.T01:CDS
AAATGCGAACGATGGTGTTT+TGG 0.307442 1:-59576843 MsG0180003268.01.T01:CDS
TCTGCCATCAAGAGCTAATA+TGG 0.310065 1:+59576274 None:intergenic
TGCTGCTTCGCTTTCTAGAT+TGG 0.317886 1:-59576702 MsG0180003268.01.T01:CDS
TGCAAAACTAGCGAACAAAT+TGG 0.320251 1:+59577492 None:intergenic
TTGTGAGAGTTATTCCATTA+TGG 0.321111 1:-59577162 MsG0180003268.01.T01:CDS
ATCACTATGCCTTTCATCAT+TGG 0.325217 1:-59582010 MsG0180003268.01.T01:intron
AAGATAACCCTAATAACAAT+AGG 0.342050 1:-59577708 MsG0180003268.01.T01:CDS
ATATAGGTACGGTAATTATA+TGG 0.342184 1:-59577018 MsG0180003268.01.T01:CDS
CACTCAGATTAATTGGAATA+AGG 0.343805 1:+59582191 None:intergenic
ATCTACTGTGCATAGATTCC+AGG 0.353747 1:+59577207 None:intergenic
TCTATTATCTAGTTTGTAGT+TGG 0.361259 1:-59576520 MsG0180003268.01.T01:CDS
GACAAGGAAGCTCAATATTC+AGG 0.363454 1:-59582082 MsG0180003268.01.T01:CDS
CCTCTTATCTTTGATGCTAA+AGG 0.364995 1:+59576968 None:intergenic
TTTAGTCTCATGTCAATTGC+AGG 0.365344 1:-59577781 MsG0180003268.01.T01:CDS
TGATTGGGATATTCATCATC+TGG 0.366154 1:+59582112 None:intergenic
CTATTATCTAGTTTGTAGTT+GGG 0.371900 1:-59576519 MsG0180003268.01.T01:CDS
GCTTGCACCTCAACTTTGTC+TGG 0.381207 1:-59576804 MsG0180003268.01.T01:CDS
AACCACAGGCATGAACTTGC+TGG 0.394025 1:+59578773 None:intergenic
AGACCACCCTTGCTTCTTTG+TGG 0.396099 1:+59582034 None:intergenic
CGATTCTTAAGTGTTGGATT+AGG 0.396315 1:-59578720 MsG0180003268.01.T01:CDS
GCTGCTTCGCTTTCTAGATT+GGG 0.403169 1:-59576701 MsG0180003268.01.T01:CDS
GTTTCATGTTCCATGGCATT+TGG 0.404377 1:-59577751 MsG0180003268.01.T01:CDS
TTTGTTGCAGATTCTTATCT+GGG 0.404677 1:-59578744 MsG0180003268.01.T01:CDS
ATCAAATACAATATCATGTT+GGG 0.404738 1:+59578855 None:intergenic
GCAAAGAAAAGAATGGGAAT+TGG 0.406768 1:-59576926 MsG0180003268.01.T01:CDS
GGACCTTTCAAGCTTCATCT+TGG 0.414516 1:-59578831 MsG0180003268.01.T01:CDS
CCCTAATAACAATAGGGTCT+TGG 0.418911 1:-59577701 MsG0180003268.01.T01:CDS
CCTTTAGCATCAAAGATAAG+AGG 0.419532 1:-59576968 MsG0180003268.01.T01:CDS
TCAAGATATGGAAGGCTTTG+TGG 0.419950 1:-59576448 MsG0180003268.01.T01:three_prime_UTR
CAACATGATATTGTATTTGA+TGG 0.424400 1:-59578853 MsG0180003268.01.T01:CDS
TCTTTGAGCGTTATCAATAT+AGG 0.428181 1:-59577034 MsG0180003268.01.T01:CDS
GCTTGTGAAATGCAATAGTT+TGG 0.430319 1:+59582232 None:intergenic
TCTGAAGCAGTCAATTTCAT+AGG 0.436089 1:-59576773 MsG0180003268.01.T01:CDS
GCACCTCAACTTTGTCTGGC+TGG 0.437194 1:-59576800 MsG0180003268.01.T01:CDS
CTGGGTCGATTCTTAAGTGT+TGG 0.439811 1:-59578726 MsG0180003268.01.T01:CDS
ATGATCCCACTAGACCATAA+TGG 0.450318 1:+59577148 None:intergenic
AATGAGGTTGACTCAAGATA+TGG 0.450892 1:-59576460 MsG0180003268.01.T01:three_prime_UTR
TCTAGATTGGGAATGGCTGC+AGG 0.452950 1:-59576689 MsG0180003268.01.T01:CDS
GTAGCCATATTAGCTCTTGA+TGG 0.452969 1:-59576278 MsG0180003268.01.T01:three_prime_UTR
ATCACCAACATCATGGGAAA+TGG 0.460646 1:-59577821 MsG0180003268.01.T01:CDS
GGAGGTGATATGTCTGTTCA+AGG 0.462389 1:+59577078 None:intergenic
ATCAGTGCAAAGAAAAGAAT+GGG 0.469148 1:-59576932 MsG0180003268.01.T01:CDS
ATCTACCTTAGTTTATCGGT+TGG 0.470140 1:+59577370 None:intergenic
AGATAACCCTAATAACAATA+GGG 0.471415 1:-59577707 MsG0180003268.01.T01:CDS
CGCTGGAACTTCAAAGTTGG+AGG 0.472600 1:+59577060 None:intergenic
TTCAGGTGATGCTGATGAAA+TGG 0.473624 1:-59582065 MsG0180003268.01.T01:CDS
GATCAGTGCAAAGAAAAGAA+TGG 0.478546 1:-59576933 MsG0180003268.01.T01:CDS
TTCGCTTTCTAGATTGGGAA+TGG 0.481892 1:-59576696 MsG0180003268.01.T01:CDS
TGCTGGCTGCAGAAGATAAG+AGG 0.483878 1:+59578790 None:intergenic
TGTTGGTGATTGATCGCCTT+CGG 0.485414 1:+59577834 None:intergenic
TTAGTTAACTCTTCAACTGC+TGG 0.486367 1:+59576488 None:intergenic
TCTGGATCTTCTTGTTGCAA+TGG 0.487003 1:+59582130 None:intergenic
ACTTCAAGAGGAGGAAATGA+TGG 0.487305 1:-59576623 MsG0180003268.01.T01:CDS
TAGATAATAGAGTATATTAA+GGG 0.487308 1:+59576532 None:intergenic
GCGATCAATCACCAACATCA+TGG 0.496498 1:-59577828 MsG0180003268.01.T01:CDS
CTCATGTCAATTGCAGGTGC+TGG 0.499541 1:-59577775 MsG0180003268.01.T01:CDS
TGCTGGTGTTTCATGTTCCA+TGG 0.501696 1:-59577758 MsG0180003268.01.T01:CDS
TATCTTTATATATTATAACT+TGG 0.502695 1:+59576223 None:intergenic
AAGTACTCTTGGCTTATAGC+TGG 0.504830 1:-59576563 MsG0180003268.01.T01:CDS
CTTGGCAATACTGCAAGCTT+AGG 0.510734 1:-59578885 MsG0180003268.01.T01:CDS
ATGATGACCCTTAGCATTGG+AGG 0.512129 1:-59577127 MsG0180003268.01.T01:CDS
TCCCGCTGGAACTTCAAAGT+TGG 0.516812 1:+59577057 None:intergenic
AGCAGTTGAAGAGTTAACTA+AGG 0.520464 1:-59576486 MsG0180003268.01.T01:CDS
CATCAAATACAATATCATGT+TGG 0.523970 1:+59578854 None:intergenic
GCAACACTAGACATAGTACT+TGG 0.530889 1:+59576722 None:intergenic
AACATGATATTGTATTTGAT+GGG 0.530924 1:-59578852 MsG0180003268.01.T01:CDS
TCTCCAAGATGAAGCTTGAA+AGG 0.532522 1:+59578828 None:intergenic
GGGAATGGCTGCAGGAAGCT+TGG 0.534721 1:-59576681 MsG0180003268.01.T01:CDS
GTTATTCCATTATGGTCTAG+TGG 0.537272 1:-59577154 MsG0180003268.01.T01:CDS
CGATCAATCACCAACATCAT+GGG 0.540764 1:-59577827 MsG0180003268.01.T01:CDS
AAAATGAGCCTCCAATGCTA+AGG 0.543292 1:+59577119 None:intergenic
ATGGTTCAAGAATAAACCCC+TGG 0.543754 1:-59577225 MsG0180003268.01.T01:CDS
GTGATTGTTTGCAGCAAATG+AGG 0.544320 1:-59578910 MsG0180003268.01.T01:intron
AGACATAGTCATAGTAGCAA+TGG 0.544780 1:+59582162 None:intergenic
CTTTAGCATCAAAGATAAGA+GGG 0.548696 1:-59576967 MsG0180003268.01.T01:CDS
TGCAATTGACATGAGACTAA+AGG 0.550395 1:+59577783 None:intergenic
TCGTTCCAACCGATAAACTA+AGG 0.553432 1:-59577375 MsG0180003268.01.T01:intron
TTTGCAGCAAATGAGGCACT+TGG 0.561736 1:-59578903 MsG0180003268.01.T01:intron
ATCATGATGACCCTTAGCAT+TGG 0.562857 1:-59577130 MsG0180003268.01.T01:CDS
TTCTCAACCACAAAGAAGCA+AGG 0.563827 1:-59582041 MsG0180003268.01.T01:CDS
TTATTCCATTATGGTCTAGT+GGG 0.564458 1:-59577153 MsG0180003268.01.T01:CDS
GGTGATTGATCGCCTTCGGT+TGG 0.565754 1:+59577838 None:intergenic
TCTACTGTGCATAGATTCCA+GGG 0.566589 1:+59577208 None:intergenic
GAGTTAACTAAGGATTAATG+AGG 0.568152 1:-59576476 MsG0180003268.01.T01:exon
TTGTTGTGATGGTAAAATTG+AGG 0.569745 1:+59577412 None:intergenic
GAACAAGATATAGCATGTGA+TGG 0.572383 1:-59577244 MsG0180003268.01.T01:CDS
AGCAAGTTCATGCCTGTGGT+TGG 0.578750 1:-59578771 MsG0180003268.01.T01:CDS
GAGCGTTATCAATATAGGTA+CGG 0.578923 1:-59577029 MsG0180003268.01.T01:CDS
TCCAACTTTGAAGTTCCAGC+GGG 0.578991 1:-59577058 MsG0180003268.01.T01:CDS
GATTTGAGTCCTTGTTGTGA+TGG 0.583256 1:+59577401 None:intergenic
GATTTCTGATGATATTAACA+AGG 0.586027 1:-59576597 MsG0180003268.01.T01:CDS
TTGGTCTGCACCAAATGCCA+TGG 0.588107 1:+59577741 None:intergenic
ATTGCCATTTCCCATGATGT+TGG 0.593954 1:+59577817 None:intergenic
TACAGGGAATGGCATTGTTG+TGG 0.598433 1:-59577879 MsG0180003268.01.T01:intron
GTAGAAAACACTACTTCAAG+AGG 0.601842 1:-59576635 MsG0180003268.01.T01:CDS
GATAACATACCAATGATGAA+AGG 0.603026 1:+59582001 None:intergenic
ATAACGCTCAAAGATCCCGC+TGG 0.608804 1:+59577043 None:intergenic
GCAACAAAAGCACCAACCAC+AGG 0.611443 1:+59578759 None:intergenic
CTCCAACTTTGAAGTTCCAG+CGG 0.612248 1:-59577059 MsG0180003268.01.T01:CDS
AAATGAGCCTCCAATGCTAA+GGG 0.618035 1:+59577120 None:intergenic
CTTCAAGAGGAGGAAATGAT+GGG 0.622650 1:-59576622 MsG0180003268.01.T01:CDS
AGCCAGCAAGTTCATGCCTG+TGG 0.625089 1:-59578775 MsG0180003268.01.T01:CDS
GAAAACACTACTTCAAGAGG+AGG 0.636406 1:-59576632 MsG0180003268.01.T01:CDS
TCTCAACCACAAAGAAGCAA+GGG 0.640730 1:-59582040 MsG0180003268.01.T01:CDS
CAACCACAAAGAAGCAAGGG+TGG 0.643561 1:-59582037 MsG0180003268.01.T01:CDS
AGGAGAAGAAATGCGAACGA+TGG 0.652012 1:-59576851 MsG0180003268.01.T01:CDS
ATTTCTGATGATATTAACAA+GGG 0.659432 1:-59576596 MsG0180003268.01.T01:CDS
GCAATGATCAAACCAACCGA+AGG 0.670934 1:-59577850 MsG0180003268.01.T01:CDS
CAAGAGGAGGAAATGATGGG+TGG 0.673473 1:-59576619 MsG0180003268.01.T01:CDS
TAATGGAATAACTCTCACAA+TGG 0.677324 1:+59577165 None:intergenic
CTACTGTGCATAGATTCCAG+GGG 0.694955 1:+59577209 None:intergenic
AGGTTGACTCAAGATATGGA+AGG 0.696704 1:-59576456 MsG0180003268.01.T01:three_prime_UTR
ATACCAGCCAGACAAAGTTG+AGG 0.700204 1:+59576797 None:intergenic
AGCAAGAAAGAATAACAGTG+TGG 0.706784 1:+59577546 None:intergenic
ATGCTAAAGGAATAAGAACG+CGG 0.757544 1:+59576981 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATTTATAGAGAATTA+AGG + Chr1:59578157-59578176 None:intergenic 10.0%
!! TATCTTTATATATTATAACT+TGG + Chr1:59582192-59582211 None:intergenic 10.0%
!!! AAGTTTTAGTTTATATTTTT+GGG - Chr1:59580298-59580317 MsG0180003268.01.T01:intron 10.0%
!!! AATTTTGTTGTATAATAATA+AGG - Chr1:59579469-59579488 MsG0180003268.01.T01:intron 10.0%
!!! TTATATCTTTTTATTAAAAG+TGG - Chr1:59577258-59577277 MsG0180003268.01.T01:CDS 10.0%
!! AAAACTAAAGTAAAAAGATA+AGG - Chr1:59579124-59579143 MsG0180003268.01.T01:intron 15.0%
!! TAGATAATAGAGTATATTAA+GGG + Chr1:59581883-59581902 None:intergenic 15.0%
!! TGAGTTATATTGTTAAATTA+CGG - Chr1:59576711-59576730 MsG0180003268.01.T01:CDS 15.0%
!! TTCATAAATAAATAGTGTAT+TGG + Chr1:59579944-59579963 None:intergenic 15.0%
!!! AAAAACATAGAATATTTTGT+CGG + Chr1:59576479-59576498 None:intergenic 15.0%
!!! AACACTTGATTTTTAATAAA+GGG + Chr1:59577724-59577743 None:intergenic 15.0%
!!! AATTAACTATTGAAATTTTC+CGG - Chr1:59576606-59576625 MsG0180003268.01.T01:CDS 15.0%
!!! ATAAATTTTGGTGAAATATT+CGG - Chr1:59581091-59581110 MsG0180003268.01.T01:intron 15.0%
!!! CTTTAACTTATCATATTATT+GGG + Chr1:59578226-59578245 None:intergenic 15.0%
!!! GAAGTTTTAGTTTATATTTT+TGG - Chr1:59580297-59580316 MsG0180003268.01.T01:intron 15.0%
!!! TCTATATAATTTTTGAATCA+TGG - Chr1:59579739-59579758 MsG0180003268.01.T01:intron 15.0%
!!! TCTTTAACTTATCATATTAT+TGG + Chr1:59578227-59578246 None:intergenic 15.0%
!!! TGATTTTCTCAAATTATTAA+TGG + Chr1:59580020-59580039 None:intergenic 15.0%
!!! TTATCTTTTTACTTTAGTTT+TGG + Chr1:59579125-59579144 None:intergenic 15.0%
!!! TTTGCATATTCTATAAATTT+TGG - Chr1:59581079-59581098 MsG0180003268.01.T01:intron 15.0%
!! AAAAATCTACCTTAGTTTAT+CGG + Chr1:59581049-59581068 None:intergenic 20.0%
!! AAAAATTATATAGACATACC+AGG + Chr1:59579733-59579752 None:intergenic 20.0%
!! AAAGTAAAATATTCATGATG+AGG + Chr1:59579353-59579372 None:intergenic 20.0%
!! AACATGATATTGTATTTGAT+GGG - Chr1:59579560-59579579 MsG0180003268.01.T01:intron 20.0%
!! ATACTGCAAAAATTCTTAAT+AGG - Chr1:59582054-59582073 MsG0180003268.01.T01:CDS 20.0%
!! ATAGAAATTGTCAAATATAC+TGG + Chr1:59577405-59577424 None:intergenic 20.0%
!! ATCAAATACAATATCATGTT+GGG + Chr1:59579560-59579579 None:intergenic 20.0%
!! ATTTCTGATGATATTAACAA+GGG - Chr1:59581816-59581835 MsG0180003268.01.T01:intron 20.0%
!! CTAGATAATAGAGTATATTA+AGG + Chr1:59581884-59581903 None:intergenic 20.0%
!! TAAAACTATTATTGTGATGA+AGG - Chr1:59577076-59577095 MsG0180003268.01.T01:CDS 20.0%
!! TATAATTCTAAATCACAAAG+AGG + Chr1:59576894-59576913 None:intergenic 20.0%
!! TTATATTGTTAAATTACGGA+TGG - Chr1:59576715-59576734 MsG0180003268.01.T01:CDS 20.0%
!! TTATCCAATGAAAAAACTTA+TGG + Chr1:59580223-59580242 None:intergenic 20.0%
!! TTTAGTGTAATTATATGTGT+CGG - Chr1:59580045-59580064 MsG0180003268.01.T01:intron 20.0%
!!! AATAGTTTTAGAAACATTCA+CGG + Chr1:59577066-59577085 None:intergenic 20.0%
!!! AGTTCTTTTGATAAAGAATT+TGG + Chr1:59578185-59578204 None:intergenic 20.0%
!!! ATGTAAACTTTTTTTCTTGA+AGG + Chr1:59576869-59576888 None:intergenic 20.0%
!!! CAATCTACTTTTTTATTTGA+AGG + Chr1:59580264-59580283 None:intergenic 20.0%
!!! GAACACTTGATTTTTAATAA+AGG + Chr1:59577725-59577744 None:intergenic 20.0%
!!! GGTTATCTTTTATATTTACT+TGG + Chr1:59580693-59580712 None:intergenic 20.0%
!!! GTTTTATCAAAAACCATATT+TGG - Chr1:59578341-59578360 MsG0180003268.01.T01:intron 20.0%
!!! GTTTTTTTTCTTTTTTTGAG+AGG - Chr1:59576493-59576512 MsG0180003268.01.T01:CDS 20.0%
!!! TTTTACCAATCATGATATTA+AGG - Chr1:59577849-59577868 MsG0180003268.01.T01:CDS 20.0%
!!! TTTTGAATCTTTACATAAAG+AGG + Chr1:59580895-59580914 None:intergenic 20.0%
!!! TTTTGGTAATTTGTTGTAAT+TGG + Chr1:59576787-59576806 None:intergenic 20.0%
! AAATATAATTTAGGTCCTAC+AGG + Chr1:59577020-59577039 None:intergenic 25.0%
! AAGATAACCCTAATAACAAT+AGG - Chr1:59580704-59580723 MsG0180003268.01.T01:intron 25.0%
! AAGTAAAAAGATAAGGACTT+AGG - Chr1:59579131-59579150 MsG0180003268.01.T01:intron 25.0%
! AATATTAATTTAGGTCCTAC+AGG + Chr1:59577211-59577230 None:intergenic 25.0%
! AATCATCAATCTCATTAGAT+TGG + Chr1:59577903-59577922 None:intergenic 25.0%
! AGATAACCCTAATAACAATA+GGG - Chr1:59580705-59580724 MsG0180003268.01.T01:intron 25.0%
! AGTAAAAAGATAAGGACTTA+GGG - Chr1:59579132-59579151 MsG0180003268.01.T01:intron 25.0%
! ATATAGGTACGGTAATTATA+TGG - Chr1:59581394-59581413 MsG0180003268.01.T01:intron 25.0%
! ATTTGTGACAAAAGCTAATA+TGG + Chr1:59582112-59582131 None:intergenic 25.0%
! CAACATGATATTGTATTTGA+TGG - Chr1:59579559-59579578 MsG0180003268.01.T01:intron 25.0%
! CAACTAAAAATTAGCATGTT+AGG - Chr1:59577509-59577528 MsG0180003268.01.T01:CDS 25.0%
! CACTATTTATTTATGAAGCA+CGG - Chr1:59579947-59579966 MsG0180003268.01.T01:intron 25.0%
! CAGAAAAAGAAAATTCAGAT+GGG - Chr1:59582163-59582182 MsG0180003268.01.T01:exon 25.0%
! CATCAAATACAATATCATGT+TGG + Chr1:59579561-59579580 None:intergenic 25.0%
! CTTAGTTTACCTTGTAAATA+GGG - Chr1:59580157-59580176 MsG0180003268.01.T01:intron 25.0%
! GAATATTAAGCAAGAGAAAA+AGG - Chr1:59577994-59578013 MsG0180003268.01.T01:intron 25.0%
! GATTTCTGATGATATTAACA+AGG - Chr1:59581815-59581834 MsG0180003268.01.T01:intron 25.0%
! TACATGAATGTAACAAACAA+GGG + Chr1:59579279-59579298 None:intergenic 25.0%
! TATCATTGTTTAATTCTCCA+AGG + Chr1:59579328-59579347 None:intergenic 25.0%
! TATTGTTATGGGAAAATCTA+CGG - Chr1:59579174-59579193 MsG0180003268.01.T01:intron 25.0%
! TCAGAAAAAGAAAATTCAGA+TGG - Chr1:59582162-59582181 MsG0180003268.01.T01:exon 25.0%
! TCTTAGTTTACCTTGTAAAT+AGG - Chr1:59580156-59580175 MsG0180003268.01.T01:intron 25.0%
! TGATAAAGATATATACCAAC+CGG + Chr1:59576628-59576647 None:intergenic 25.0%
! TTACATGAATGTAACAAACA+AGG + Chr1:59579280-59579299 None:intergenic 25.0%
!! AATCTAATGAGATTGATGAT+TGG - Chr1:59577902-59577921 MsG0180003268.01.T01:intron 25.0%
!! CAACTTTTCTCATTAAATTG+CGG + Chr1:59580488-59580507 None:intergenic 25.0%
!! CTATTATCTAGTTTGTAGTT+GGG - Chr1:59581893-59581912 MsG0180003268.01.T01:intron 25.0%
!! CTCCAAGGTAAAAAAATTTT+AGG + Chr1:59579313-59579332 None:intergenic 25.0%
!! CTGTGTAATAAAACTCATTT+TGG + Chr1:59581665-59581684 None:intergenic 25.0%
!! GTATATATCCAAGATCATTT+TGG - Chr1:59580799-59580818 MsG0180003268.01.T01:intron 25.0%
!! GTTTTTATCTTTTCTCTACT+CGG - Chr1:59581512-59581531 MsG0180003268.01.T01:intron 25.0%
!! TATACGTGTTCTTTTATATC+TGG - Chr1:59576581-59576600 MsG0180003268.01.T01:CDS 25.0%
!! TCTATTATCTAGTTTGTAGT+TGG - Chr1:59581892-59581911 MsG0180003268.01.T01:intron 25.0%
!! TGGTTTTTGATAAAACACTA+TGG + Chr1:59578337-59578356 None:intergenic 25.0%
!!! AATTGAGGTGAATTTTTAAG+CGG + Chr1:59580988-59581007 None:intergenic 25.0%
!!! CACCTAAAATTTTTTTACCT+TGG - Chr1:59579308-59579327 MsG0180003268.01.T01:intron 25.0%
!!! CTAACATGCTAATTTTTAGT+TGG + Chr1:59577511-59577530 None:intergenic 25.0%
!!! CTAACCATAAGTTTTTTCAT+TGG - Chr1:59580216-59580235 MsG0180003268.01.T01:intron 25.0%
!!! CTTGGTTTTAAATTACAGTT+GGG - Chr1:59579816-59579835 MsG0180003268.01.T01:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG + Chr1:59578523-59578542 None:intergenic 25.0%
!!! TGCTAATTTTTAGTTGGAAT+AGG + Chr1:59577505-59577524 None:intergenic 25.0%
!!! TTGGTTTTAAATTACAGTTG+GGG - Chr1:59579817-59579836 MsG0180003268.01.T01:intron 25.0%
AAAATACAAAACCAACCTGT+AGG - Chr1:59577193-59577212 MsG0180003268.01.T01:CDS 30.0%
AACCATTCGAAAAGATTTAG+AGG + Chr1:59578381-59578400 None:intergenic 30.0%
AAGGTAAACTAAGATTGCTT+TGG + Chr1:59580150-59580169 None:intergenic 30.0%
ACAAACCATATAAAGTGACA+CGG - Chr1:59579915-59579934 MsG0180003268.01.T01:intron 30.0%
ACATGAATGTAACAAACAAG+GGG + Chr1:59579278-59579297 None:intergenic 30.0%
AGACTAGACAAGATAGAATT+AGG + Chr1:59578586-59578605 None:intergenic 30.0%
ATAAGTATCACACAATTTCG+AGG + Chr1:59580343-59580362 None:intergenic 30.0%
ATATCTAAACCGTGTAACTT+GGG - Chr1:59578862-59578881 MsG0180003268.01.T01:CDS 30.0%
ATCAGTGCAAAGAAAAGAAT+GGG - Chr1:59581480-59581499 MsG0180003268.01.T01:intron 30.0%
ATTCCCTGTAACAACAAAAA+AGG + Chr1:59580523-59580542 None:intergenic 30.0%
CACTCAGATTAATTGGAATA+AGG + Chr1:59576224-59576243 None:intergenic 30.0%
CGCAATTTAATGAGAAAAGT+TGG - Chr1:59580486-59580505 MsG0180003268.01.T01:intron 30.0%
CTTTAGCATCAAAGATAAGA+GGG - Chr1:59581445-59581464 MsG0180003268.01.T01:intron 30.0%
GAGTTAACTAAGGATTAATG+AGG - Chr1:59581936-59581955 MsG0180003268.01.T01:intron 30.0%
GATAACATACCAATGATGAA+AGG + Chr1:59576414-59576433 None:intergenic 30.0%
TAAACTAAGATTGCTTTGGT+GGG + Chr1:59580146-59580165 None:intergenic 30.0%
TAATGGAATAACTCTCACAA+TGG + Chr1:59581250-59581269 None:intergenic 30.0%
TACCAATCATGATATTAAGG+TGG - Chr1:59577852-59577871 MsG0180003268.01.T01:CDS 30.0%
TCAATCAATACTTTGAACCT+TGG - Chr1:59579798-59579817 MsG0180003268.01.T01:intron 30.0%
TCTTTGAGCGTTATCAATAT+AGG - Chr1:59581378-59581397 MsG0180003268.01.T01:intron 30.0%
TGAATATCCCAATCAAAAAG+TGG - Chr1:59576308-59576327 MsG0180003268.01.T01:three_prime_UTR 30.0%
TGTAAGAAGAGTAGATCAAA+TGG + Chr1:59578456-59578475 None:intergenic 30.0%
TTACACGGTTTAGATATCTT+GGG + Chr1:59578859-59578878 None:intergenic 30.0%
TTATTCCATTATGGTCTAGT+GGG - Chr1:59581259-59581278 MsG0180003268.01.T01:intron 30.0%
TTGATCTACTCTTCTTACAA+CGG - Chr1:59578457-59578476 MsG0180003268.01.T01:intron 30.0%
TTGTGAGAGTTATTCCATTA+TGG - Chr1:59581250-59581269 MsG0180003268.01.T01:intron 30.0%
TTGTTGTGATGGTAAAATTG+AGG + Chr1:59581003-59581022 None:intergenic 30.0%
TTTGTTGCAGATTCTTATCT+GGG - Chr1:59579668-59579687 MsG0180003268.01.T01:intron 30.0%
! AACTATTGAAATTTTCCGGT+TGG - Chr1:59576610-59576629 MsG0180003268.01.T01:CDS 30.0%
! AACTTTTCTCTATTGCCAAA+TGG + Chr1:59577789-59577808 None:intergenic 30.0%
! ACTGGCTTAGATTCAATAAT+AGG + Chr1:59577387-59577406 None:intergenic 30.0%
! CCAACTGTAATTTAAAACCA+AGG + Chr1:59579818-59579837 None:intergenic 30.0%
! GAACAAAGCTTGTGTTATTA+AGG - Chr1:59581140-59581159 MsG0180003268.01.T01:intron 30.0%
! GGAACTAACTTTTATATCTC+AGG - Chr1:59581112-59581131 MsG0180003268.01.T01:intron 30.0%
! GTAGATTTTCCCATAACAAT+AGG + Chr1:59579175-59579194 None:intergenic 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG - Chr1:59578398-59578417 MsG0180003268.01.T01:intron 30.0%
! TCAATTTTACCATCACAACA+AGG - Chr1:59581002-59581021 MsG0180003268.01.T01:intron 30.0%
! TCTACAAAAAGCATACATCT+CGG - Chr1:59579067-59579086 MsG0180003268.01.T01:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG - Chr1:59578527-59578546 MsG0180003268.01.T01:intron 30.0%
! TGGAAGTTTTCTGTTGTTAT+AGG + Chr1:59580962-59580981 None:intergenic 30.0%
! TTAAGTATGTAGACACGTTT+TGG + Chr1:59576804-59576823 None:intergenic 30.0%
! TTGAGTCTTTTGTTGAAACA+TGG + Chr1:59576830-59576849 None:intergenic 30.0%
! TTTTAAACTATTAAACGCCG+CGG + Chr1:59579890-59579909 None:intergenic 30.0%
! TTTTCCAACCAAAATGATCT+TGG + Chr1:59580810-59580829 None:intergenic 30.0%
! TTTTCGAATGGTTTCTCTAA+TGG - Chr1:59578388-59578407 MsG0180003268.01.T01:intron 30.0%
! TTTTGTTGCAGATTCTTATC+TGG - Chr1:59579667-59579686 MsG0180003268.01.T01:intron 30.0%
!! ATATCCAAGATCATTTTGGT+TGG - Chr1:59580803-59580822 MsG0180003268.01.T01:intron 30.0%
!! TCTTGGAAATGTTTTTCAAC+TGG - Chr1:59580728-59580747 MsG0180003268.01.T01:intron 30.0%
!! TTTGGTTGGAAAATTGGTTT+TGG - Chr1:59580817-59580836 MsG0180003268.01.T01:intron 30.0%
!!! ACTTTTTTTCTTGAAGGAAG+AGG + Chr1:59576863-59576882 None:intergenic 30.0%
!!! CAGGTTGGTTTTGTATTTTA+AGG + Chr1:59577192-59577211 None:intergenic 30.0%
!!! CATCCTTTTTTGTTGTTACA+GGG - Chr1:59580517-59580536 MsG0180003268.01.T01:intron 30.0%
!!! CCTTGGTTTTAAATTACAGT+TGG - Chr1:59579815-59579834 MsG0180003268.01.T01:intron 30.0%
!!! GATCATTTTGGTTGGAAAAT+TGG - Chr1:59580811-59580830 MsG0180003268.01.T01:intron 30.0%
!!! GTTGGTTTTGTATTTTAAGG+AGG + Chr1:59577189-59577208 None:intergenic 30.0%
!!! TCATCCTTTTTTGTTGTTAC+AGG - Chr1:59580516-59580535 MsG0180003268.01.T01:intron 30.0%
!!! TTTAGTTTTGGATGTACTGA+CGG + Chr1:59579113-59579132 None:intergenic 30.0%
!!! TTTTTTGTTGTTACAGGGAA+TGG - Chr1:59580522-59580541 MsG0180003268.01.T01:intron 30.0%
AACTTCAGCAAAATGAGAAG+TGG + Chr1:59578926-59578945 None:intergenic 35.0%
AACTTTCCTTTCAGCTTAAG+TGG - Chr1:59578725-59578744 MsG0180003268.01.T01:CDS 35.0%
AAGAAGAGTAGATCAAATGG+AGG + Chr1:59578453-59578472 None:intergenic 35.0%
ACTTCAGCAAAATGAGAAGT+GGG + Chr1:59578925-59578944 None:intergenic 35.0%
AGACATAGTCATAGTAGCAA+TGG + Chr1:59576253-59576272 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG + Chr1:59578369-59578388 None:intergenic 35.0%
AGCAAGAAAGAATAACAGTG+TGG + Chr1:59580869-59580888 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGT+TGG + Chr1:59578534-59578553 None:intergenic 35.0%
AGCAGCAATTATGACATGAA+TGG + Chr1:59577450-59577469 None:intergenic 35.0%
AGCAGTTGAAGAGTTAACTA+AGG - Chr1:59581926-59581945 MsG0180003268.01.T01:intron 35.0%
AGCTGAAAGGAAAGTTCTAT+CGG + Chr1:59578721-59578740 None:intergenic 35.0%
AGTTAGGTTAAAAGAGGTAG+AGG + Chr1:59578428-59578447 None:intergenic 35.0%
ATAATTTAGGTCCTACAGGT+TGG + Chr1:59577016-59577035 None:intergenic 35.0%
ATATCATACCCCAAGTTACA+CGG + Chr1:59578874-59578893 None:intergenic 35.0%
ATCACTATGCCTTTCATCAT+TGG - Chr1:59576402-59576421 MsG0180003268.01.T01:three_prime_UTR 35.0%
ATCTACCTTAGTTTATCGGT+TGG + Chr1:59581045-59581064 None:intergenic 35.0%
ATGCTAAAGGAATAAGAACG+CGG + Chr1:59581434-59581453 None:intergenic 35.0%
CAAACCATATAAAGTGACAC+GGG - Chr1:59579916-59579935 MsG0180003268.01.T01:intron 35.0%
CAATATTTCAACCACAACTG+TGG - Chr1:59580455-59580474 MsG0180003268.01.T01:intron 35.0%
CCTCTTATCTTTGATGCTAA+AGG + Chr1:59581447-59581466 None:intergenic 35.0%
CCTTTAGCATCAAAGATAAG+AGG - Chr1:59581444-59581463 MsG0180003268.01.T01:intron 35.0%
GAACAAGATATAGCATGTGA+TGG - Chr1:59581168-59581187 MsG0180003268.01.T01:intron 35.0%
GAAGATGCACTCAGATTAAT+TGG + Chr1:59576231-59576250 None:intergenic 35.0%
GAGCGTTATCAATATAGGTA+CGG - Chr1:59581383-59581402 MsG0180003268.01.T01:intron 35.0%
GATATCTAAACCGTGTAACT+TGG - Chr1:59578861-59578880 MsG0180003268.01.T01:CDS 35.0%
GATCAGTGCAAAGAAAAGAA+TGG - Chr1:59581479-59581498 MsG0180003268.01.T01:intron 35.0%
GCAAAGAAAAGAATGGGAAT+TGG - Chr1:59581486-59581505 MsG0180003268.01.T01:intron 35.0%
GTAAACTAAGATTGCTTTGG+TGG + Chr1:59580147-59580166 None:intergenic 35.0%
GTAGAAAACACTACTTCAAG+AGG - Chr1:59581777-59581796 MsG0180003268.01.T01:intron 35.0%
GTCCACCTTAATATCATGAT+TGG + Chr1:59577857-59577876 None:intergenic 35.0%
GTTACACGGTTTAGATATCT+TGG + Chr1:59578860-59578879 None:intergenic 35.0%
GTTATTCCATTATGGTCTAG+TGG - Chr1:59581258-59581277 MsG0180003268.01.T01:intron 35.0%
TACATCATCGTATTCAAGCT+GGG + Chr1:59578799-59578818 None:intergenic 35.0%
TACTTATCCTGATGCAGTTA+CGG - Chr1:59580356-59580375 MsG0180003268.01.T01:intron 35.0%
TATCTAAACCGTGTAACTTG+GGG - Chr1:59578863-59578882 MsG0180003268.01.T01:CDS 35.0%
TGATTGGGATATTCATCATC+TGG + Chr1:59576303-59576322 None:intergenic 35.0%
TGCAAAACTAGCGAACAAAT+TGG + Chr1:59580923-59580942 None:intergenic 35.0%
TGCAATTGACATGAGACTAA+AGG + Chr1:59580632-59580651 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG + Chr1:59578514-59578533 None:intergenic 35.0%
TTAATTTAGGTCCTACAGGT+TGG + Chr1:59577207-59577226 None:intergenic 35.0%
TTAGTTAACTCTTCAACTGC+TGG + Chr1:59581927-59581946 None:intergenic 35.0%
TTGAAATGGAGAAGAATCTC+AGG + Chr1:59578773-59578792 None:intergenic 35.0%
TTTAGTCTCATGTCAATTGC+AGG - Chr1:59580631-59580650 MsG0180003268.01.T01:intron 35.0%
! AAAGTACCACTTAAGCTGAA+AGG + Chr1:59578734-59578753 None:intergenic 35.0%
! AATGAGGTTGACTCAAGATA+TGG - Chr1:59581952-59581971 MsG0180003268.01.T01:intron 35.0%
! AGAAGCATGTTTCCATTTAG+CGG - Chr1:59578041-59578060 MsG0180003268.01.T01:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG + Chr1:59578357-59578376 None:intergenic 35.0%
! CATAGAATATTTTGTCGGTC+TGG + Chr1:59576474-59576493 None:intergenic 35.0%
! CCAAGACCCTATTGTTATTA+GGG + Chr1:59580714-59580733 None:intergenic 35.0%
! GACCTCTAAATCTTTTCGAA+TGG - Chr1:59578376-59578395 MsG0180003268.01.T01:intron 35.0%
! TCCAAGACCCTATTGTTATT+AGG + Chr1:59580715-59580734 None:intergenic 35.0%
! TCTGAAGCAGTCAATTTCAT+AGG - Chr1:59581639-59581658 MsG0180003268.01.T01:intron 35.0%
!! ATCCTGGATAGCTCTAATAT+AGG - Chr1:59579243-59579262 MsG0180003268.01.T01:intron 35.0%
!! CAGAAGATAAGAGGAGTATT+TGG + Chr1:59579616-59579635 None:intergenic 35.0%
!! CGATTCTTAAGTGTTGGATT+AGG - Chr1:59579692-59579711 MsG0180003268.01.T01:intron 35.0%
!! GGTGAATTTTTAAGCGGTAA+TGG + Chr1:59580982-59581001 None:intergenic 35.0%
!! GTCATTTTGACAAGTACTCT+TGG - Chr1:59581838-59581857 MsG0180003268.01.T01:intron 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG - Chr1:59578832-59578851 MsG0180003268.01.T01:CDS 35.0%
!!! CAGCGATTTTTGAGACTATA+AGG - Chr1:59581541-59581560 MsG0180003268.01.T01:intron 35.0%
!!! GTGGACATTACTGTTTTTGA+AGG - Chr1:59577871-59577890 MsG0180003268.01.T01:CDS 35.0%
!!! TCCTTGTCCACTTTTTGATT+GGG + Chr1:59576318-59576337 None:intergenic 35.0%
!!! TTCCTTGTCCACTTTTTGAT+TGG + Chr1:59576319-59576338 None:intergenic 35.0%
AAAAAGATGTGAGCACGTGA+AGG - Chr1:59578073-59578092 MsG0180003268.01.T01:intron 40.0%
AAAATGAGCCTCCAATGCTA+AGG + Chr1:59581296-59581315 None:intergenic 40.0%
AAATGAGCCTCCAATGCTAA+GGG + Chr1:59581295-59581314 None:intergenic 40.0%
AAGTACTCTTGGCTTATAGC+TGG - Chr1:59581849-59581868 MsG0180003268.01.T01:intron 40.0%
AATGTAACAAACAAGGGGTG+AGG + Chr1:59579273-59579292 None:intergenic 40.0%
ACCGAGAAACTAGCATGTTA+GGG + Chr1:59577359-59577378 None:intergenic 40.0%
ACGTGTGGTAAACTTTGATG+TGG - Chr1:59577106-59577125 MsG0180003268.01.T01:CDS 40.0%
ACTTCAAGAGGAGGAAATGA+TGG - Chr1:59581789-59581808 MsG0180003268.01.T01:intron 40.0%
AGATCAAATGGAGGAGAGTT+AGG + Chr1:59578444-59578463 None:intergenic 40.0%
AGCTATCCAGGATATGTATG+AGG + Chr1:59579236-59579255 None:intergenic 40.0%
ATAACAATAGGACTGCACCA+AGG + Chr1:59579163-59579182 None:intergenic 40.0%
ATCACCAACATCATGGGAAA+TGG - Chr1:59580591-59580610 MsG0180003268.01.T01:intron 40.0%
ATCATGATGACCCTTAGCAT+TGG - Chr1:59581282-59581301 MsG0180003268.01.T01:intron 40.0%
ATCTACTGTGCATAGATTCC+AGG + Chr1:59581208-59581227 None:intergenic 40.0%
ATGATCCCACTAGACCATAA+TGG + Chr1:59581267-59581286 None:intergenic 40.0%
ATGGTTCAAGAATAAACCCC+TGG - Chr1:59581187-59581206 MsG0180003268.01.T01:intron 40.0%
CACTTGACTTTCGATCCATT+TGG - Chr1:59577771-59577790 MsG0180003268.01.T01:CDS 40.0%
CCCTAATAACAATAGGGTCT+TGG - Chr1:59580711-59580730 MsG0180003268.01.T01:intron 40.0%
CGATCAATCACCAACATCAT+GGG - Chr1:59580585-59580604 MsG0180003268.01.T01:intron 40.0%
CTATCCAGGATATGTATGAG+GGG + Chr1:59579234-59579253 None:intergenic 40.0%
CTTCAAGAGGAGGAAATGAT+GGG - Chr1:59581790-59581809 MsG0180003268.01.T01:intron 40.0%
GAAAACACTACTTCAAGAGG+AGG - Chr1:59581780-59581799 MsG0180003268.01.T01:intron 40.0%
GAAGCATGTTTCCATTTAGC+GGG - Chr1:59578042-59578061 MsG0180003268.01.T01:intron 40.0%
GACAAGGAAGCTCAATATTC+AGG - Chr1:59576330-59576349 MsG0180003268.01.T01:three_prime_UTR 40.0%
GAGGAGAGTTAGGTTAAAAG+AGG + Chr1:59578434-59578453 None:intergenic 40.0%
GCAACACTAGACATAGTACT+TGG + Chr1:59581693-59581712 None:intergenic 40.0%
GCTATCCAGGATATGTATGA+GGG + Chr1:59579235-59579254 None:intergenic 40.0%
GGGTAAATAGCTATGAAGCA+CGG + Chr1:59580126-59580145 None:intergenic 40.0%
GGGTCCATAGTACAAAATGA+CGG + Chr1:59578839-59578858 None:intergenic 40.0%
GTACATCATCGTATTCAAGC+TGG + Chr1:59578800-59578819 None:intergenic 40.0%
GTCCAGCAAAGAAGATCTAA+GGG + Chr1:59577600-59577619 None:intergenic 40.0%
GTGATTGTTTGCAGCAAATG+AGG - Chr1:59579502-59579521 MsG0180003268.01.T01:intron 40.0%
GTTTCATGTTCCATGGCATT+TGG - Chr1:59580661-59580680 MsG0180003268.01.T01:intron 40.0%
TAACAATAGGACTGCACCAA+GGG + Chr1:59579162-59579181 None:intergenic 40.0%
TACCGAGAAACTAGCATGTT+AGG + Chr1:59577360-59577379 None:intergenic 40.0%
TAGAAGCAAGACGGAGTATA+TGG + Chr1:59578954-59578973 None:intergenic 40.0%
TATCCAGGATATGTATGAGG+GGG + Chr1:59579233-59579252 None:intergenic 40.0%
TATGGAAACAACCAACCTGT+AGG - Chr1:59577162-59577181 MsG0180003268.01.T01:CDS 40.0%
TCAAGATATGGAAGGCTTTG+TGG - Chr1:59581964-59581983 MsG0180003268.01.T01:intron 40.0%
TCCCAATCAAAAAGTGGACA+AGG - Chr1:59576314-59576333 MsG0180003268.01.T01:three_prime_UTR 40.0%
TCGTTCCAACCGATAAACTA+AGG - Chr1:59581037-59581056 MsG0180003268.01.T01:intron 40.0%
TCTACTGTGCATAGATTCCA+GGG + Chr1:59581207-59581226 None:intergenic 40.0%
TCTCAACCACAAAGAAGCAA+GGG - Chr1:59576372-59576391 MsG0180003268.01.T01:three_prime_UTR 40.0%
TCTCCAAGATGAAGCTTGAA+AGG + Chr1:59579587-59579606 None:intergenic 40.0%
TCTGCCATCAAGAGCTAATA+TGG + Chr1:59582141-59582160 None:intergenic 40.0%
TCTGGATCTTCTTGTTGCAA+TGG + Chr1:59576285-59576304 None:intergenic 40.0%
TCTTCAAATTAGGCATGTCC+CGG + Chr1:59580099-59580118 None:intergenic 40.0%
TCTTCTTACAACGGCATCTA+CGG - Chr1:59578466-59578485 MsG0180003268.01.T01:intron 40.0%
TGCCTATATTAGAGCTATCC+AGG + Chr1:59579248-59579267 None:intergenic 40.0%
TGGTGCAGTCCTATTGTTAT+GGG - Chr1:59579163-59579182 MsG0180003268.01.T01:intron 40.0%
TGTCCAGCAAAGAAGATCTA+AGG + Chr1:59577601-59577620 None:intergenic 40.0%
TTCAGGTGATGCTGATGAAA+TGG - Chr1:59576347-59576366 MsG0180003268.01.T01:three_prime_UTR 40.0%
TTCGCTTTCTAGATTGGGAA+TGG - Chr1:59581716-59581735 MsG0180003268.01.T01:intron 40.0%
TTCTCAACCACAAAGAAGCA+AGG - Chr1:59576371-59576390 MsG0180003268.01.T01:three_prime_UTR 40.0%
TTGGTGCAGTCCTATTGTTA+TGG - Chr1:59579162-59579181 MsG0180003268.01.T01:intron 40.0%
! AAATGCGAACGATGGTGTTT+TGG - Chr1:59581569-59581588 MsG0180003268.01.T01:intron 40.0%
! ACCCTAACATGCTAGTTTCT+CGG - Chr1:59577355-59577374 MsG0180003268.01.T01:intron 40.0%
! AGGTTGACTCAAGATATGGA+AGG - Chr1:59581956-59581975 MsG0180003268.01.T01:intron 40.0%
! ATTGCCATTTCCCATGATGT+TGG + Chr1:59580598-59580617 None:intergenic 40.0%
! CACGTGCTCACATCTTTTTA+AGG + Chr1:59578072-59578091 None:intergenic 40.0%
! CTAGTTTGTAGTTGGGCTTA+TGG - Chr1:59581900-59581919 MsG0180003268.01.T01:intron 40.0%
! GAATATTTTGTCGGTCTGGT+TGG + Chr1:59576470-59576489 None:intergenic 40.0%
! GATAAAAACATGAGTGCTGC+TGG + Chr1:59580847-59580866 None:intergenic 40.0%
! GATTTGAGTCCTTGTTGTGA+TGG + Chr1:59581014-59581033 None:intergenic 40.0%
! GTACGTGTGGTGTTTTATCA+TGG - Chr1:59576743-59576762 MsG0180003268.01.T01:CDS 40.0%
! GTAGATGATGTAGTCTTGCT+TGG + Chr1:59579052-59579071 None:intergenic 40.0%
! GTAGCCATATTAGCTCTTGA+TGG - Chr1:59582134-59582153 MsG0180003268.01.T01:CDS 40.0%
! GTGTGGTGTTTTATCATGGA+TGG - Chr1:59576747-59576766 MsG0180003268.01.T01:CDS 40.0%
! TTCTTTGCACTGATCGTAAC+TGG + Chr1:59581474-59581493 None:intergenic 40.0%
! TTTAAGGTTCTCCCGCTAAA+TGG + Chr1:59578056-59578075 None:intergenic 40.0%
!! GTATTTTAAGGAGGTCCTAC+AGG + Chr1:59577180-59577199 None:intergenic 40.0%
!! TTTTGGAAATGTCGGCATTG+TGG - Chr1:59581586-59581605 MsG0180003268.01.T01:intron 40.0%
!!! CGATGGTGTTTTGGAAATGT+CGG - Chr1:59581578-59581597 MsG0180003268.01.T01:intron 40.0%
AATGAGAAGTGGGTCTACCT+TGG + Chr1:59578915-59578934 None:intergenic 45.0%
ACACCATTAGAGAGAGAGTG+GGG + Chr1:59578559-59578578 None:intergenic 45.0%
AGGAGAAGAAATGCGAACGA+TGG - Chr1:59581561-59581580 MsG0180003268.01.T01:intron 45.0%
AGTCGAGGGAGGAGTTAAAT+GGG + Chr1:59579027-59579046 None:intergenic 45.0%
ATACCAGCCAGACAAAGTTG+AGG + Chr1:59581618-59581637 None:intergenic 45.0%
ATCATCGTATTCAAGCTGGG+TGG + Chr1:59578796-59578815 None:intergenic 45.0%
ATCTCCAACTTTCACCTCCA+AGG - Chr1:59578895-59578914 MsG0180003268.01.T01:CDS 45.0%
CACCCTTAGATCTTCTTTGC+TGG - Chr1:59577595-59577614 MsG0180003268.01.T01:CDS 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG + Chr1:59578639-59578658 None:intergenic 45.0%
CGCTTACTTTACTCTCGTGT+TGG - Chr1:59578642-59578661 MsG0180003268.01.T01:intron 45.0%
CGTTGCGATTGTGGTCATTA+CGG - Chr1:59579841-59579860 MsG0180003268.01.T01:intron 45.0%
CTACTGTGCATAGATTCCAG+GGG + Chr1:59581206-59581225 None:intergenic 45.0%
CTTCTTACAACGGCATCTAC+GGG - Chr1:59578467-59578486 MsG0180003268.01.T01:intron 45.0%
CTTGGCAATACTGCAAGCTT+AGG - Chr1:59579527-59579546 MsG0180003268.01.T01:intron 45.0%
GACACCATTAGAGAGAGAGT+GGG + Chr1:59578560-59578579 None:intergenic 45.0%
GAGAAACTAGCATGTTAGGG+TGG + Chr1:59577356-59577375 None:intergenic 45.0%
GATGAAGGAGAAATCACGTG+TGG - Chr1:59577091-59577110 MsG0180003268.01.T01:CDS 45.0%
GCAATGATCAAACCAACCGA+AGG - Chr1:59580562-59580581 MsG0180003268.01.T01:intron 45.0%
GCACGGACACTCTTCAAATT+AGG + Chr1:59580109-59580128 None:intergenic 45.0%
GCGATCAATCACCAACATCA+TGG - Chr1:59580584-59580603 MsG0180003268.01.T01:intron 45.0%
GCTGCTTCGCTTTCTAGATT+GGG - Chr1:59581711-59581730 MsG0180003268.01.T01:intron 45.0%
GGACCTTTCAAGCTTCATCT+TGG - Chr1:59579581-59579600 MsG0180003268.01.T01:intron 45.0%
GGAGGTGATATGTCTGTTCA+AGG + Chr1:59581337-59581356 None:intergenic 45.0%
GTTGTAGGGTACGGAGTTAT+GGG + Chr1:59578678-59578697 None:intergenic 45.0%
TAAAGTTCACACCGCAGTTG+CGG - Chr1:59580401-59580420 MsG0180003268.01.T01:intron 45.0%
TAAATGGGAGGCTAGAGACT+TGG + Chr1:59579012-59579031 None:intergenic 45.0%
TACAGGGAATGGCATTGTTG+TGG - Chr1:59580533-59580552 MsG0180003268.01.T01:intron 45.0%
TCTACCTTGGAGGTGAAAGT+TGG + Chr1:59578902-59578921 None:intergenic 45.0%
TCTTCTTTGCTGGACAACAC+AGG - Chr1:59577605-59577624 MsG0180003268.01.T01:CDS 45.0%
TGACACCATTAGAGAGAGAG+TGG + Chr1:59578561-59578580 None:intergenic 45.0%
TGCTGGTGTTTCATGTTCCA+TGG - Chr1:59580654-59580673 MsG0180003268.01.T01:intron 45.0%
TGTTGTAGGGTACGGAGTTA+TGG + Chr1:59578679-59578698 None:intergenic 45.0%
TTAGGGTGGTTACGATTGAG+AGG + Chr1:59577342-59577361 None:intergenic 45.0%
TTCAAGCTGGGTGGTTGAAA+TGG + Chr1:59578787-59578806 None:intergenic 45.0%
TTTAAGGAGGTCCTACAGGT+TGG + Chr1:59577176-59577195 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - Chr1:59578288-59578307 MsG0180003268.01.T01:intron 45.0%
! ATGATGACCCTTAGCATTGG+AGG - Chr1:59581285-59581304 MsG0180003268.01.T01:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - Chr1:59578287-59578306 MsG0180003268.01.T01:intron 45.0%
! CTGGGTCGATTCTTAAGTGT+TGG - Chr1:59579686-59579705 MsG0180003268.01.T01:intron 45.0%
! TGCTGCTTCGCTTTCTAGAT+TGG - Chr1:59581710-59581729 MsG0180003268.01.T01:intron 45.0%
! TTTGCAGCAAATGAGGCACT+TGG - Chr1:59579509-59579528 MsG0180003268.01.T01:intron 45.0%
!! ATGTGTCGGTGTCGTGTTAT+CGG - Chr1:59580059-59580078 MsG0180003268.01.T01:intron 45.0%
!! CCTACAGGTTGGTTGATTCT+GGG + Chr1:59577005-59577024 None:intergenic 45.0%
!! CTCCAACTTTGAAGTTCCAG+CGG - Chr1:59581353-59581372 MsG0180003268.01.T01:intron 45.0%
!! TACATCTCGGTGCTAACTCT+TGG - Chr1:59579080-59579099 MsG0180003268.01.T01:intron 45.0%
!! TCCAACTTTGAAGTTCCAGC+GGG - Chr1:59581354-59581373 MsG0180003268.01.T01:intron 45.0%
!! TCCTACAGGTTGGTTGATTC+TGG + Chr1:59577006-59577025 None:intergenic 45.0%
!! TGTTGGTGATTGATCGCCTT+CGG + Chr1:59580581-59580600 None:intergenic 45.0%
!! TAAATATAGATATAAAAATA+TGG - Chr1:59577144-59577163 MsG0180003268.01.T01:CDS 5.0%
!! TAATAAACAAAATATAATTT+AGG + Chr1:59577029-59577048 None:intergenic 5.0%
!! TTTACTAAAAATATTAATTT+AGG + Chr1:59577220-59577239 None:intergenic 5.0%
AACCACAGGCATGAACTTGC+TGG + Chr1:59579642-59579661 None:intergenic 50.0%
AAGCCCCCTCATACATATCC+TGG - Chr1:59579227-59579246 MsG0180003268.01.T01:intron 50.0%
AAGGACTTAGGGTTGACCCT+TGG - Chr1:59579143-59579162 MsG0180003268.01.T01:intron 50.0%
AATTAGGCATGTCCCGGTGA+CGG + Chr1:59580093-59580112 None:intergenic 50.0%
ACAAGTGTGATGCCTTCGTG+TGG - Chr1:59577673-59577692 MsG0180003268.01.T01:CDS 50.0%
ACCGGCAATGTTGTAGGGTA+CGG + Chr1:59578687-59578706 None:intergenic 50.0%
ACGGATGGATAGTGTACGTG+TGG - Chr1:59576730-59576749 MsG0180003268.01.T01:CDS 50.0%
ACTAGTGTAAGGACGCAGGA+TGG + Chr1:59579205-59579224 None:intergenic 50.0%
ACTCCGTCTTGCTTCTACTC+AGG - Chr1:59578957-59578976 MsG0180003268.01.T01:intron 50.0%
AGACCACCCTTGCTTCTTTG+TGG + Chr1:59576381-59576400 None:intergenic 50.0%
AGCAAGTTCATGCCTGTGGT+TGG - Chr1:59579641-59579660 MsG0180003268.01.T01:intron 50.0%
AGCGAAGCAAATCCACACGA+AGG + Chr1:59577688-59577707 None:intergenic 50.0%
AGGATGTTGCGTTGGATGAG+TGG + Chr1:59578611-59578630 None:intergenic 50.0%
AGGTTCTGCTGTCAGTTTCC+TGG - Chr1:59579712-59579731 MsG0180003268.01.T01:intron 50.0%
AGTCAGACCGGCAATGTTGT+AGG + Chr1:59578693-59578712 None:intergenic 50.0%
ATAACGCTCAAAGATCCCGC+TGG + Chr1:59581372-59581391 None:intergenic 50.0%
ATCATGGATGGCGTTAGTCG+TGG - Chr1:59576759-59576778 MsG0180003268.01.T01:CDS 50.0%
ATCCTGATGCAGTTACGGTG+TGG - Chr1:59580361-59580380 MsG0180003268.01.T01:intron 50.0%
CAACCACAAAGAAGCAAGGG+TGG - Chr1:59576375-59576394 MsG0180003268.01.T01:three_prime_UTR 50.0%
CACCATTAGAGAGAGAGTGG+GGG + Chr1:59578558-59578577 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + Chr1:59578289-59578308 None:intergenic 50.0%
CCCAGAATCAACCAACCTGT+AGG - Chr1:59577002-59577021 MsG0180003268.01.T01:CDS 50.0%
CGCTGGAACTTCAAAGTTGG+AGG + Chr1:59581355-59581374 None:intergenic 50.0%
CTAGTGTAAGGACGCAGGAT+GGG + Chr1:59579204-59579223 None:intergenic 50.0%
CTATCGGACAACAGTCAGAC+CGG + Chr1:59578705-59578724 None:intergenic 50.0%
CTCATGTCAATTGCAGGTGC+TGG - Chr1:59580637-59580656 MsG0180003268.01.T01:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - Chr1:59578292-59578311 MsG0180003268.01.T01:intron 50.0%
GAGTCGAGGGAGGAGTTAAA+TGG + Chr1:59579028-59579047 None:intergenic 50.0%
GCTTGCACCTCAACTTTGTC+TGG - Chr1:59581608-59581627 MsG0180003268.01.T01:intron 50.0%
GTCAGACCGGCAATGTTGTA+GGG + Chr1:59578692-59578711 None:intergenic 50.0%
TACCCCCACTCTCTCTCTAA+TGG - Chr1:59578553-59578572 MsG0180003268.01.T01:intron 50.0%
TAGTGTAAGGACGCAGGATG+GGG + Chr1:59579203-59579222 None:intergenic 50.0%
TCATGGATGGCGTTAGTCGT+GGG - Chr1:59576760-59576779 MsG0180003268.01.T01:CDS 50.0%
TCCCGCTGGAACTTCAAAGT+TGG + Chr1:59581358-59581377 None:intergenic 50.0%
TCCGTACCCTACAACATTGC+CGG - Chr1:59578683-59578702 MsG0180003268.01.T01:intron 50.0%
TCTAGATTGGGAATGGCTGC+AGG - Chr1:59581723-59581742 MsG0180003268.01.T01:intron 50.0%
TCTTTGCTGGACAACACAGG+TGG - Chr1:59577608-59577627 MsG0180003268.01.T01:CDS 50.0%
TTCGACTAGTGTAAGGACGC+AGG + Chr1:59579209-59579228 None:intergenic 50.0%
TTGGTCTGCACCAAATGCCA+TGG + Chr1:59580674-59580693 None:intergenic 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG + Chr1:59578631-59578650 None:intergenic 50.0%
! AGGCAAGCCTTAGAAGCGTA+TGG + Chr1:59578989-59579008 None:intergenic 50.0%
! AGTCTTGCTTGGTGAGTCGA+GGG + Chr1:59579041-59579060 None:intergenic 50.0%
! CAAGAGGAGGAAATGATGGG+TGG - Chr1:59581793-59581812 MsG0180003268.01.T01:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - Chr1:59578286-59578305 MsG0180003268.01.T01:intron 50.0%
! TAGTCTTGCTTGGTGAGTCG+AGG + Chr1:59579042-59579061 None:intergenic 50.0%
! TGCTGGCTGCAGAAGATAAG+AGG + Chr1:59579625-59579644 None:intergenic 50.0%
!! GCAACAAAAGCACCAACCAC+AGG + Chr1:59579656-59579675 None:intergenic 50.0%
!! GGCACCCGTGTCACTTTATA+TGG + Chr1:59579923-59579942 None:intergenic 50.0%
ACTAAGTGGGGTCGGCTACA+TGG - Chr1:59578300-59578319 MsG0180003268.01.T01:intron 55.0%
AGCCACACCGTAACTGCATC+AGG + Chr1:59580366-59580385 None:intergenic 55.0%
AGCCAGCAAGTTCATGCCTG+TGG - Chr1:59579637-59579656 MsG0180003268.01.T01:intron 55.0%
AGGGGGCTTCGACTAGTGTA+AGG + Chr1:59579216-59579235 None:intergenic 55.0%
AGTTGGGGTCGTTGCGATTG+TGG - Chr1:59579832-59579851 MsG0180003268.01.T01:intron 55.0%
ATGGCATCACACCGCAACTG+CGG + Chr1:59580415-59580434 None:intergenic 55.0%
ATGGGAGGCTAGAGACTTGG+AGG + Chr1:59579009-59579028 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + Chr1:59578301-59578320 None:intergenic 55.0%
CCGCCTGAGTAGAAGCAAGA+CGG + Chr1:59578963-59578982 None:intergenic 55.0%
CCGTCTTGCTTCTACTCAGG+CGG - Chr1:59578960-59578979 MsG0180003268.01.T01:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + Chr1:59578294-59578313 None:intergenic 55.0%
CGAGGGAGGAGTTAAATGGG+AGG + Chr1:59579024-59579043 None:intergenic 55.0%
CGGAGATGAGGATGTTGCGT+TGG + Chr1:59578619-59578638 None:intergenic 55.0%
GAGAAGTGGGTCTACCTTGG+AGG + Chr1:59578912-59578931 None:intergenic 55.0%
GCACCTCAACTTTGTCTGGC+TGG - Chr1:59581612-59581631 MsG0180003268.01.T01:intron 55.0%
GCGGAAGCCATACGCTTCTA+AGG - Chr1:59578979-59578998 MsG0180003268.01.T01:intron 55.0%
GGTGATTGATCGCCTTCGGT+TGG + Chr1:59580577-59580596 None:intergenic 55.0%
GTAGGGTACGGAGTTATGGG+CGG + Chr1:59578675-59578694 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG + Chr1:59578300-59578319 None:intergenic 55.0%
! TGATGCGCTAGCCTCTACGA+TGG + Chr1:59580434-59580453 None:intergenic 55.0%
ATCGGACACGTGTCCGTCAC+CGG - Chr1:59580077-59580096 MsG0180003268.01.T01:intron 60.0%
CGACTGCATTGCAACTGCCG+CGG - Chr1:59579870-59579889 MsG0180003268.01.T01:intron 60.0%
GCGGTCTGCATCCACAGTTG+TGG + Chr1:59580469-59580488 None:intergenic 60.0%
GCGGTGTGATGCCATCGTAG+AGG - Chr1:59580420-59580439 MsG0180003268.01.T01:intron 60.0%
GGGAATGGCTGCAGGAAGCT+TGG - Chr1:59581731-59581750 MsG0180003268.01.T01:intron 60.0%
! CTTGCTTGGTGAGTCGAGGG+AGG + Chr1:59579038-59579057 None:intergenic 60.0%
TCGGACACGTGTCCGTCACC+GGG - Chr1:59580078-59580097 MsG0180003268.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 59576182 59582252 59576182 ID=MsG0180003268.01;Name=MsG0180003268.01
Chr1 mRNA 59576182 59582252 59576182 ID=MsG0180003268.01.T01;Parent=MsG0180003268.01;Name=MsG0180003268.01.T01;_AED=0.33;_eAED=0.33;_QI=79|1|1|1|1|1|4|299|573
Chr1 exon 59576182 59577300 59576182 ID=MsG0180003268.01.T01:exon:49188;Parent=MsG0180003268.01.T01
Chr1 exon 59577376 59577896 59577376 ID=MsG0180003268.01.T01:exon:49187;Parent=MsG0180003268.01.T01
Chr1 exon 59578701 59578918 59578701 ID=MsG0180003268.01.T01:exon:49186;Parent=MsG0180003268.01.T01
Chr1 exon 59582011 59582252 59582011 ID=MsG0180003268.01.T01:exon:49185;Parent=MsG0180003268.01.T01
Chr1 five_prime_UTR 59582174 59582252 59582174 ID=MsG0180003268.01.T01:five_prime_utr;Parent=MsG0180003268.01.T01
Chr1 CDS 59582011 59582173 59582011 ID=MsG0180003268.01.T01:cds;Parent=MsG0180003268.01.T01
Chr1 CDS 59578701 59578918 59578701 ID=MsG0180003268.01.T01:cds;Parent=MsG0180003268.01.T01
Chr1 CDS 59577376 59577896 59577376 ID=MsG0180003268.01.T01:cds;Parent=MsG0180003268.01.T01
Chr1 CDS 59576481 59577300 59576481 ID=MsG0180003268.01.T01:cds;Parent=MsG0180003268.01.T01
Chr1 three_prime_UTR 59576182 59576480 59576182 ID=MsG0180003268.01.T01:three_prime_utr;Parent=MsG0180003268.01.T01
Gene Sequence

>MsG0180003268.01.T01

ATGACTATGTCTATATATGTTCCATTGCAACAAGAAGATCCAGATGATGAATATCCCAATCAAAAAGTGGACAAGGAAGCTCAATATTCAGGTGATGCTGATGAAATGGTTTCTCAACCACAAAGAAGCAAGGGTGGTCTTATCACTATGCCTTTCATCATTGCAAATGAGGCACTTGGCAATACTGCAAGCTTAGGAATTTTGCCCAACATGATATTGTATTTGATGGGACCTTTCAAGCTTCATCTTGGAGAAGCTAACCAAATACTCCTCTTATCTTCTGCAGCCAGCAAGTTCATGCCTGTGGTTGGTGCTTTTGTTGCAGATTCTTATCTGGGTCGATTCTTAAGTGTTGGATTAGGTTCTGCTGTCAGTTTCCTGGGAATGGCATTGTTGTGGTTAACAGCAATGATCAAACCAACCGAAGGCGATCAATCACCAACATCATGGGAAATGGCAATGTTAATATCTGCCTTTAGTCTCATGTCAATTGCAGGTGCTGGTGTTTCATGTTCCATGGCATTTGGTGCAGACCAAGTAAATATAAAAGATAACCCTAATAACAATAGGGTCTTGGAAATGTTTTTCAACTGGTATTATGCTTTTGCAAGTATCTCTGCGATAATAGCTCTCACTGTAATAGTATATATCCAAGATCATTTTGGTTGGAAAATTGGTTTTGGAGTTCCAGCAGCACTCATGTTTTTATCCACACTGTTATTCTTTCTTGCTTCTCCTCTTTATGTAAAGATTCAAAAAAGAACCAATTTGTTCGCTAGTTTTGCACAAGTAATAGTTGCTTCCTATAACAACAGAAAACTTCCATTACCGCTTAAAAATTCACCTCAATTTTACCATCACAACAAGGACTCAAATCTTGTCGTTCCAACCGATAAACTAAGGTTTCTGAACAAAGCTTGTGTTATTAAGGAATTTGAACAAGATATAGCATGTGATGGTTCAAGAATAAACCCCTGGAATCTATGCACAGTAGATCAAGTAGAAGAATTAAAAGCCATTGTGAGAGTTATTCCATTATGGTCTAGTGGGATCATGATGACCCTTAGCATTGGAGGCTCATTTTCATTGCTTCAAGCTAAAACCTTGAACAGACATATCACCTCCAACTTTGAAGTTCCAGCGGGATCTTTGAGCGTTATCAATATAGGTACGGTAATTATATGGATAGTTTTCTATGACCGCGTTCTTATTCCTTTAGCATCAAAGATAAGAGGGAAACCAGTTACGATCAGTGCAAAGAAAAGAATGGGAATTGGTTTGTTTTTATCTTTTCTCTACTCGGTAAATGCAGCGATTTTTGAGACTATAAGGAGAAGAAATGCGAACGATGGTGTTTTGGAAATGTCGGCATTGTGGCTTGCACCTCAACTTTGTCTGGCTGGTATATCTGAAGCAGTCAATTTCATAGGCCAAAATGAGTTTTATTACACAGAGTTTCCAAGTACTATGTCTAGTGTTGCTGCTTCGCTTTCTAGATTGGGAATGGCTGCAGGAAGCTTGGTGTCTTCTTTGTTGTTCAGCATTGTAGAAAACACTACTTCAAGAGGAGGAAATGATGGGTGGATTTCTGATGATATTAACAAGGGTCATTTTGACAAGTACTCTTGGCTTATAGCTGGAGTTAGTGCCCTTAATATACTCTATTATCTAGTTTGTAGTTGGGCTTATGGACCAGCAGTTGAAGAGTTAACTAAGGATTAA

Protein sequence

>MsG0180003268.01.T01

MTMSIYVPLQQEDPDDEYPNQKVDKEAQYSGDADEMVSQPQRSKGGLITMPFIIANEALGNTASLGILPNMILYLMGPFKLHLGEANQILLLSSAASKFMPVVGAFVADSYLGRFLSVGLGSAVSFLGMALLWLTAMIKPTEGDQSPTSWEMAMLISAFSLMSIAGAGVSCSMAFGADQVNIKDNPNNNRVLEMFFNWYYAFASISAIIALTVIVYIQDHFGWKIGFGVPAALMFLSTLLFFLASPLYVKIQKRTNLFASFAQVIVASYNNRKLPLPLKNSPQFYHHNKDSNLVVPTDKLRFLNKACVIKEFEQDIACDGSRINPWNLCTVDQVEELKAIVRVIPLWSSGIMMTLSIGGSFSLLQAKTLNRHITSNFEVPAGSLSVINIGTVIIWIVFYDRVLIPLASKIRGKPVTISAKKRMGIGLFLSFLYSVNAAIFETIRRRNANDGVLEMSALWLAPQLCLAGISEAVNFIGQNEFYYTEFPSTMSSVAASLSRLGMAAGSLVSSLLFSIVENTTSRGGNDGWISDDINKGHFDKYSWLIAGVSALNILYYLVCSWAYGPAVEELTKD*