AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040360.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040360.01.T01 MTR_7g088990 92.604 338 4 1 1 317 1 338 0.0 633
MsG0780040360.01.T01 MTR_1g092910 33.520 358 149 13 21 298 48 396 1.40e-36 138
MsG0780040360.01.T01 MTR_1g092910 33.631 336 154 13 23 298 34 360 3.81e-34 130
MsG0780040360.01.T01 MTR_1g092900 47.273 165 59 6 21 158 68 231 1.93e-31 125
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040360.01.T01 AT3G56680 46.933 326 140 7 21 321 24 341 1.98e-85 264
MsG0780040360.01.T01 AT2G40960 45.217 345 153 11 1 318 1 336 2.42e-73 233
MsG0780040360.01.T01 AT2G40960 45.217 345 153 11 1 318 1 336 2.42e-73 233
MsG0780040360.01.T01 AT3G10770 46.483 327 124 12 11 306 1 307 8.36e-64 207
MsG0780040360.01.T01 AT3G10770 46.177 327 133 11 11 306 1 315 5.11e-63 205
MsG0780040360.01.T01 AT5G05100 43.658 339 125 14 17 313 7 321 1.12e-59 196

Find 113 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGAACTATTAGATGATATT+AGG 0.156868 7:+76417602 MsG0780040360.01.T01:exon
TCTAACAACGATGTTGCTTC+TGG 0.187278 7:+76413331 MsG0780040360.01.T01:CDS
ACCACGGGATACTTGCTTTC+AGG 0.210785 7:-76414969 None:intergenic
CAAACAATGGTTCAAGATAT+TGG 0.232345 7:+76414909 MsG0780040360.01.T01:CDS
GCAAATGAAGGTTGAGCTTT+TGG 0.265227 7:-76416060 None:intergenic
TAACAGAATGCTAATAGATT+TGG 0.292867 7:+76416467 MsG0780040360.01.T01:intron
GTTCAAGATATTGGCTTAGA+TGG 0.302395 7:+76414918 MsG0780040360.01.T01:CDS
TTCAATCCTGGGGTACAAAA+AGG 0.312586 7:-76416174 None:intergenic
GCAAGAGCACGTATCTTTAA+TGG 0.321155 7:+76415161 MsG0780040360.01.T01:CDS
TATTGTAGTATGTATGTCTT+TGG 0.330437 7:+76417729 MsG0780040360.01.T01:three_prime_UTR
AATGAGGGAAAGGAATAATA+AGG 0.335513 7:-76413180 None:intergenic
TAATATGAGATCTCCCTAAA+AGG 0.342657 7:-76417665 None:intergenic
TTCCTTTCCCTCATTCTTAG+AGG 0.344963 7:+76413188 MsG0780040360.01.T01:five_prime_UTR
CCAGGATTGAATCCGGCATC+TGG 0.345187 7:+76416186 MsG0780040360.01.T01:CDS
GGTAAACAGCATGTCTAAAT+TGG 0.352313 7:-76416266 None:intergenic
CAAACATGTCATTGTATTTG+AGG 0.356722 7:-76416356 None:intergenic
TGATATTAGGGAGGAAGGTT+TGG 0.370708 7:+76417615 MsG0780040360.01.T01:three_prime_UTR
GCTCAAGCTTCACTTGGATA+TGG 0.375325 7:+76416126 MsG0780040360.01.T01:CDS
AGATGGACAGAGTAAAATTC+TGG 0.392158 7:+76414935 MsG0780040360.01.T01:CDS
CACCGTGTTGCTCAACACTA+TGG 0.395156 7:+76414882 MsG0780040360.01.T01:CDS
TAGGGAGGAAGGTTTGGACT+TGG 0.403019 7:+76417621 MsG0780040360.01.T01:three_prime_UTR
CTAACAACGATGTTGCTTCT+GGG 0.405297 7:+76413332 MsG0780040360.01.T01:CDS
ATATGATGATAATGTTTCTA+TGG 0.407557 7:+76417849 MsG0780040360.01.T01:three_prime_UTR
ATCAGCCTCTGCTGTTAACC+TGG 0.414771 7:+76416023 MsG0780040360.01.T01:CDS
TGTTGCTTCTGGGTTTGTTA+AGG 0.414998 7:+76413342 MsG0780040360.01.T01:CDS
AGAACTATTAGATGATATTA+GGG 0.418166 7:+76417603 MsG0780040360.01.T01:exon
CCCTTCTTCTTATCTCCGAC+TGG 0.419347 7:+76414854 MsG0780040360.01.T01:CDS
AAGCTCAATGGTTGACCAAA+TGG 0.420205 7:-76417569 None:intergenic
CCATAGCTACGATCATAATC+TGG 0.422944 7:-76415374 None:intergenic
CCAGATGCCGGATTCAATCC+TGG 0.425232 7:-76416186 None:intergenic
TGGGTTTGTTAAGGAGTCAA+TGG 0.434010 7:+76413351 MsG0780040360.01.T01:CDS
GAATGAGCATACATCATTGT+AGG 0.437582 7:-76416237 None:intergenic
CCTCATAAAACTAGTTTGAA+TGG 0.441449 7:+76415068 MsG0780040360.01.T01:CDS
TCATTGTCCAACTGTTTAGC+AGG 0.448582 7:-76415008 None:intergenic
GGACTCATCATCGGGGTTGA+AGG 0.450195 7:-76416153 None:intergenic
ATTGTTGGTTCAGGTATGCT+AGG 0.451450 7:+76415995 MsG0780040360.01.T01:intron
AAAGAATTCTTCCCATCTGT+TGG 0.459105 7:-76415224 None:intergenic
TTGTAGGACTTGGCCATTGT+AGG 0.459952 7:-76416221 None:intergenic
GAGTTGCCATTATCAGAGAT+AGG 0.468549 7:+76415333 MsG0780040360.01.T01:CDS
TTGTACCCCAGGATTGAATC+CGG 0.472293 7:+76416179 MsG0780040360.01.T01:CDS
AAGAATTCTTCCCATCTGTT+GGG 0.474533 7:-76415223 None:intergenic
TTCCTTCCCTCTAAGAATGA+GGG 0.486448 7:-76413195 None:intergenic
TTTCCTTCCCTCTAAGAATG+AGG 0.486744 7:-76413196 None:intergenic
AAAATTTGAATAGTGCAAGT+TGG 0.489035 7:-76416508 None:intergenic
AGAGGAAGGAGGAGTATGAT+CGG 0.490303 7:+76415138 MsG0780040360.01.T01:CDS
TTAGATGATATTAGGGAGGA+AGG 0.492410 7:+76417610 MsG0780040360.01.T01:exon
TTCCCTCATTCTTAGAGGGA+AGG 0.500262 7:+76413193 MsG0780040360.01.T01:five_prime_UTR
TATAAAATAGTTAACTCTAG+TGG 0.500606 7:+76417805 MsG0780040360.01.T01:three_prime_UTR
TAAAATAAATGTGGTTTACC+TGG 0.501778 7:-76416287 None:intergenic
TCTCTTCCACACTTCTCAGA+GGG 0.503169 7:-76415118 None:intergenic
AAGAACCATGGATTCATCGT+TGG 0.505075 7:+76413306 MsG0780040360.01.T01:exon
CAGATGCCGGATTCAATCCT+GGG 0.507037 7:-76416185 None:intergenic
CCACAAGCTCAAGCTTCACT+TGG 0.508990 7:+76416120 MsG0780040360.01.T01:CDS
CCAGATTATGATCGTAGCTA+TGG 0.509780 7:+76415374 MsG0780040360.01.T01:CDS
ATTTAGACATGCTGTTTACC+AGG 0.511011 7:+76416269 MsG0780040360.01.T01:CDS
CTTCCCATCTGTTGGGACCA+TGG 0.514650 7:-76415216 None:intergenic
GCATACATCATTGTAGGACT+TGG 0.514708 7:-76416231 None:intergenic
TCATCCATGGTCCCAACAGA+TGG 0.519489 7:+76415212 MsG0780040360.01.T01:CDS
CAGGATTGAATCCGGCATCT+GGG 0.521389 7:+76416187 MsG0780040360.01.T01:CDS
CCAAGTGAAGCTTGAGCTTG+TGG 0.521619 7:-76416120 None:intergenic
GAGAAGTGTGGAAGAGAGGA+AGG 0.522947 7:+76415124 MsG0780040360.01.T01:CDS
CTCTCTTCCACACTTCTCAG+AGG 0.523726 7:-76415119 None:intergenic
TATATATCTGTCTAATGTTG+TGG 0.524478 7:+76417891 MsG0780040360.01.T01:three_prime_UTR
ATCTGTTGGGACCATGGATG+AGG 0.524522 7:-76415210 None:intergenic
GAGGAAGGAGGAGTATGATC+GGG 0.524661 7:+76415139 MsG0780040360.01.T01:CDS
CTCTGAGAAGTGTGGAAGAG+AGG 0.524774 7:+76415120 MsG0780040360.01.T01:CDS
GTTTCATACGGAGCAAATGA+AGG 0.532517 7:-76416072 None:intergenic
TCCTTTCCCTCATTCTTAGA+GGG 0.535819 7:+76413189 MsG0780040360.01.T01:five_prime_UTR
GCCAGTCGGAGATAAGAAGA+AGG 0.539797 7:-76414855 None:intergenic
AAATCTTTCTGAATCAGCCA+TGG 0.544821 7:-76415282 None:intergenic
TTCAGTTGATACCTCATCCA+TGG 0.550395 7:+76415199 MsG0780040360.01.T01:CDS
TCCCTCTAAGAATGAGGGAA+AGG 0.550797 7:-76413190 None:intergenic
AAAATTGAGTAAAATAAATG+TGG 0.550916 7:-76416296 None:intergenic
AATCTTTCTGAATCAGCCAT+GGG 0.552116 7:-76415281 None:intergenic
TGATGATAATGTTTCTATGG+TGG 0.554282 7:+76417852 MsG0780040360.01.T01:three_prime_UTR
ACAGAAACAAGGGTCTATAG+AGG 0.554991 7:-76417706 None:intergenic
CATTATCAGAGATAGGGAAA+AGG 0.556313 7:+76415340 MsG0780040360.01.T01:CDS
AAGTGTGGAAGAGAGGAAGG+AGG 0.557123 7:+76415127 MsG0780040360.01.T01:CDS
TGAAATACCTGCTAAACAGT+TGG 0.557642 7:+76415001 MsG0780040360.01.T01:CDS
TGTGAATAGTCAAAGCTCAA+TGG 0.557966 7:-76417581 None:intergenic
TAAGCACCATCCCCAGATGC+CGG 0.560221 7:-76416198 None:intergenic
AGTTGCCATTATCAGAGATA+GGG 0.562784 7:+76415334 MsG0780040360.01.T01:CDS
GAATGCTAATAGATTTGGAT+AGG 0.570718 7:+76416472 MsG0780040360.01.T01:intron
TTGAATCCGGCATCTGGGGA+TGG 0.572223 7:+76416192 MsG0780040360.01.T01:CDS
TGATTAAAAGTAGTTTCATA+CGG 0.575270 7:-76416084 None:intergenic
AGAAACCAACGATGAATCCA+TGG 0.575372 7:-76413311 None:intergenic
AGGATTGAATCCGGCATCTG+GGG 0.586030 7:+76416188 MsG0780040360.01.T01:CDS
CATCCATGGTCCCAACAGAT+GGG 0.589398 7:+76415213 MsG0780040360.01.T01:CDS
GAGGGAAAGGAATAATAAGG+AGG 0.594577 7:-76413177 None:intergenic
ATTTCAGATAAGCGAACCAC+GGG 0.595439 7:-76414984 None:intergenic
TTGGCAAATTAAAAGGCACC+AGG 0.598139 7:-76416041 None:intergenic
TACTACAATAACAGAAACAA+GGG 0.601890 7:-76417716 None:intergenic
AGGGAAAGGAATAATAAGGA+GGG 0.609509 7:-76413176 None:intergenic
CTCATCATCGGGGTTGAAGG+CGG 0.611755 7:-76416150 None:intergenic
GGGATGGTGCTTACCTACAA+TGG 0.618223 7:+76416208 MsG0780040360.01.T01:CDS
ATATCTGTCTAATGTTGTGG+AGG 0.621215 7:+76417894 MsG0780040360.01.T01:three_prime_UTR
ATTATGATCGTAGCTATGGA+AGG 0.624886 7:+76415378 MsG0780040360.01.T01:CDS
AGGAAACCCTCTGAGAAGTG+TGG 0.625906 7:+76415112 MsG0780040360.01.T01:CDS
CCAGTCGGAGATAAGAAGAA+GGG 0.625989 7:-76414854 None:intergenic
AGGCACCAGGTTAACAGCAG+AGG 0.634836 7:-76416028 None:intergenic
CAACACGGTGTGCAGCCAGT+CGG 0.636650 7:-76414869 None:intergenic
ATACTACAATAACAGAAACA+AGG 0.641122 7:-76417717 None:intergenic
ACACTATGGTATGCAAACAA+TGG 0.654903 7:+76414896 MsG0780040360.01.T01:CDS
ACCTGAAAGCAAGTATCCCG+TGG 0.660921 7:+76414968 MsG0780040360.01.T01:CDS
ATCTTTCTGAATCAGCCATG+GGG 0.669707 7:-76415280 None:intergenic
ACTATTAGATGATATTAGGG+AGG 0.671221 7:+76417606 MsG0780040360.01.T01:exon
TATTTCAGATAAGCGAACCA+CGG 0.680806 7:-76414985 None:intergenic
TGAAACTAGCAAAATCCCCA+TGG 0.683008 7:+76415265 MsG0780040360.01.T01:CDS
TACCATAGTGTTGAGCAACA+CGG 0.687847 7:-76414884 None:intergenic
GAAACTAACTGGTTAGACGA+TGG 0.703806 7:-76413411 None:intergenic
TCTCTGATAATGGCAACTCG+AGG 0.704401 7:-76415329 None:intergenic
TAACTGGTTAGACGATGGCG+AGG 0.708532 7:-76413406 None:intergenic
AGATGCCGGATTCAATCCTG+GGG 0.714738 7:-76416184 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTGAGTAAAATAAATG+TGG - Chr7:76416299-76416318 None:intergenic 15.0%
!! AACATGAAATTTGAATAAAT+TGG - Chr7:76413767-76413786 None:intergenic 15.0%
!! AATTTATTCAAATTTCATGT+TGG + Chr7:76413766-76413785 MsG0780040360.01.T01:intron 15.0%
!! ATCTAATAACTTACATTATT+AGG + Chr7:76416385-76416404 MsG0780040360.01.T01:intron 15.0%
!! TCATAATAAAAAATTACCAA+CGG - Chr7:76417236-76417255 None:intergenic 15.0%
!! TTTGTGTAAAAATTAAACTT+AGG + Chr7:76414360-76414379 MsG0780040360.01.T01:intron 15.0%
!!! AATTTTTTATTATGATCTGA+TGG + Chr7:76417241-76417260 MsG0780040360.01.T01:intron 15.0%
!!! ATCAAATTGAATTTTATTGT+TGG + Chr7:76415980-76415999 MsG0780040360.01.T01:intron 15.0%
!!! ATTATTTTGCAAAAACAATA+TGG - Chr7:76417323-76417342 None:intergenic 15.0%
!!! GTTTAATTTTTACACAAAAA+TGG - Chr7:76414358-76414377 None:intergenic 15.0%
!!! TATTTTTGTTGAATTTTCAT+GGG + Chr7:76413464-76413483 MsG0780040360.01.T01:intron 15.0%
!!! TTATTTTTGTTGAATTTTCA+TGG + Chr7:76413463-76413482 MsG0780040360.01.T01:intron 15.0%
!! AAAAAATTGTCATACAATCT+AGG + Chr7:76415045-76415064 MsG0780040360.01.T01:CDS 20.0%
!! AAAAATTAAAGGTCAACAAT+AGG - Chr7:76417164-76417183 None:intergenic 20.0%
!! AATAACTATGTTTGCAATTA+CGG - Chr7:76415439-76415458 None:intergenic 20.0%
!! AATATCAGACAACTTAATAA+GGG - Chr7:76417470-76417489 None:intergenic 20.0%
!! AGAACTATTAGATGATATTA+GGG + Chr7:76417603-76417622 MsG0780040360.01.T01:exon 20.0%
!! ATATTATCTTCAACAAACTT+AGG - Chr7:76413813-76413832 None:intergenic 20.0%
!! ATCACTAAAAAAATCCAAAA+AGG - Chr7:76413530-76413549 None:intergenic 20.0%
!! GGAAATTAAAACAATCAAAA+TGG - Chr7:76416424-76416443 None:intergenic 20.0%
!! TAAAAAAAAAAGAAGAACCA+TGG + Chr7:76413294-76413313 MsG0780040360.01.T01:exon 20.0%
!! TAATATCAGACAACTTAATA+AGG - Chr7:76417471-76417490 None:intergenic 20.0%
!! TATAAAATAGTTAACTCTAG+TGG + Chr7:76417805-76417824 MsG0780040360.01.T01:three_prime_UTR 20.0%
!! TATTATCTTCAACAAACTTA+GGG - Chr7:76413812-76413831 None:intergenic 20.0%
!! TGATTAAAAGTAGTTTCATA+CGG - Chr7:76416087-76416106 None:intergenic 20.0%
!!! AAGTTTACAAACTATGTTTT+AGG + Chr7:76413943-76413962 MsG0780040360.01.T01:intron 20.0%
!!! AGTTATTTTGCTATTTTGTT+GGG + Chr7:76415452-76415471 MsG0780040360.01.T01:intron 20.0%
!!! AGTTTACAAACTATGTTTTA+GGG + Chr7:76413944-76413963 MsG0780040360.01.T01:intron 20.0%
!!! ATATGATGATAATGTTTCTA+TGG + Chr7:76417849-76417868 MsG0780040360.01.T01:three_prime_UTR 20.0%
!!! ATGGTTCTTCTTTTTTTTTT+AGG - Chr7:76413295-76413314 None:intergenic 20.0%
!!! ATTTTTTTATCCTTTGATAG+AGG - Chr7:76413836-76413855 None:intergenic 20.0%
!!! CTTTAATTTTATAGTTTTCC+AGG + Chr7:76416542-76416561 MsG0780040360.01.T01:CDS 20.0%
!!! GTTAATTTGATGTTAAAGTT+GGG + Chr7:76413680-76413699 MsG0780040360.01.T01:intron 20.0%
!!! TAGTTATTTTGCTATTTTGT+TGG + Chr7:76415451-76415470 MsG0780040360.01.T01:intron 20.0%
!!! TGGTTCTTCTTTTTTTTTTA+GGG - Chr7:76413294-76413313 None:intergenic 20.0%
!!! TGTTAATTTGATGTTAAAGT+TGG + Chr7:76413679-76413698 MsG0780040360.01.T01:intron 20.0%
! AAAATTTGAATAGTGCAAGT+TGG - Chr7:76416511-76416530 None:intergenic 25.0%
! AACAATATGGATAGATATGA+AGG - Chr7:76417310-76417329 None:intergenic 25.0%
! AAGATAATATCCTCTATCAA+AGG + Chr7:76413823-76413842 MsG0780040360.01.T01:intron 25.0%
! ACAATATGGATAGATATGAA+GGG - Chr7:76417309-76417328 None:intergenic 25.0%
! ATAAGCTGAAAACAACTTAT+AGG - Chr7:76415787-76415806 None:intergenic 25.0%
! ATACTACAATAACAGAAACA+AGG - Chr7:76417720-76417739 None:intergenic 25.0%
! ATATCAGACAACTTAATAAG+GGG - Chr7:76417469-76417488 None:intergenic 25.0%
! ATGCTATAAACACTTAGTTA+AGG + Chr7:76415915-76415934 MsG0780040360.01.T01:intron 25.0%
! ATGTTGTTAATATCTGATAG+CGG + Chr7:76416666-76416685 MsG0780040360.01.T01:intron 25.0%
! ATTTGAACTTAAATTGGCAA+AGG + Chr7:76417056-76417075 MsG0780040360.01.T01:intron 25.0%
! CAGAACTATTAGATGATATT+AGG + Chr7:76417602-76417621 MsG0780040360.01.T01:exon 25.0%
! TAAAATAAATGTGGTTTACC+TGG - Chr7:76416290-76416309 None:intergenic 25.0%
! TAACAGAATGCTAATAGATT+TGG + Chr7:76416467-76416486 MsG0780040360.01.T01:intron 25.0%
! TACTACAATAACAGAAACAA+GGG - Chr7:76417719-76417738 None:intergenic 25.0%
! TATATATCTGTCTAATGTTG+TGG + Chr7:76417891-76417910 MsG0780040360.01.T01:three_prime_UTR 25.0%
! TATTGTAGTATGTATGTCTT+TGG + Chr7:76417729-76417748 MsG0780040360.01.T01:three_prime_UTR 25.0%
! TCAAATAAGTCAACCTAAAT+AGG - Chr7:76415697-76415716 None:intergenic 25.0%
! TGTAGTTTATGCATTTGTAT+TGG + Chr7:76415656-76415675 MsG0780040360.01.T01:intron 25.0%
! TTAGTATATTAGCATGAATC+AGG + Chr7:76414712-76414731 MsG0780040360.01.T01:intron 25.0%
!! AATTGCATAGATTTTGTGTA+AGG + Chr7:76413559-76413578 MsG0780040360.01.T01:intron 25.0%
!! ATAGATTTTGTGTAAGGTTT+TGG + Chr7:76413565-76413584 MsG0780040360.01.T01:intron 25.0%
!! CGATTCATATTTGATAACAT+TGG + Chr7:76414112-76414131 MsG0780040360.01.T01:intron 25.0%
!! GCAAAAAATAACAGTTTGTT+CGG - Chr7:76414093-76414112 None:intergenic 25.0%
!! TAAACTTTAAGAGCCTATTT+AGG + Chr7:76415681-76415700 MsG0780040360.01.T01:intron 25.0%
!! TGCACTATTCAAATTTTGTT+GGG + Chr7:76416514-76416533 MsG0780040360.01.T01:CDS 25.0%
!! TTAAGGTATTTATCCTAACA+GGG + Chr7:76415932-76415951 MsG0780040360.01.T01:intron 25.0%
!! TTGAGGATTAAAGTTTTTAC+AGG + Chr7:76417378-76417397 MsG0780040360.01.T01:intron 25.0%
!! TTGCACTATTCAAATTTTGT+TGG + Chr7:76416513-76416532 MsG0780040360.01.T01:CDS 25.0%
!!! ATTTTGAAGAAGAAACTAAC+TGG - Chr7:76413425-76413444 None:intergenic 25.0%
!!! ATTTTTTTTACATAAGACCG+TGG + Chr7:76414407-76414426 MsG0780040360.01.T01:intron 25.0%
!!! GAAACTACTTTTAATCAGTT+GGG + Chr7:76416090-76416109 MsG0780040360.01.T01:CDS 25.0%
!!! GATTGTTTTAATTTCCTTGT+GGG + Chr7:76416428-76416447 MsG0780040360.01.T01:intron 25.0%
!!! GGTTCTTCTTTTTTTTTTAG+GGG - Chr7:76413293-76413312 None:intergenic 25.0%
!!! TATGACAATTTTTTTCAGCT+CGG - Chr7:76415039-76415058 None:intergenic 25.0%
!!! TGAAACTACTTTTAATCAGT+TGG + Chr7:76416089-76416108 MsG0780040360.01.T01:CDS 25.0%
!!! TGAAGGAAATTATTTTGTTG+AGG + Chr7:76417361-76417380 MsG0780040360.01.T01:intron 25.0%
!!! TGATTGTTTTAATTTCCTTG+TGG + Chr7:76416427-76416446 MsG0780040360.01.T01:intron 25.0%
!!! TTGAATTTTATTGTTGGTTC+AGG + Chr7:76415986-76416005 MsG0780040360.01.T01:intron 25.0%
!!! TTTTTTTGTTTCACCCAAAA+GGG - Chr7:76413270-76413289 None:intergenic 25.0%
AAATTAAACTTAGGCATGTG+AGG + Chr7:76414369-76414388 MsG0780040360.01.T01:intron 30.0%
AATGAGGGAAAGGAATAATA+AGG - Chr7:76413183-76413202 None:intergenic 30.0%
AATTAAAGGTCAACAATAGG+TGG - Chr7:76417161-76417180 None:intergenic 30.0%
AATTATACATCAACTACTCC+AGG - Chr7:76414519-76414538 None:intergenic 30.0%
ACACTTTATAGTACAAAGAG+TGG + Chr7:76414020-76414039 MsG0780040360.01.T01:intron 30.0%
ACTATTAGATGATATTAGGG+AGG + Chr7:76417606-76417625 MsG0780040360.01.T01:exon 30.0%
AGCGTATGCATTTAAAGAAT+CGG + Chr7:76417267-76417286 MsG0780040360.01.T01:intron 30.0%
AGGGTGATTTGAACTTAAAT+TGG + Chr7:76417050-76417069 MsG0780040360.01.T01:intron 30.0%
ATAAGCCAGCTATTATATCT+AGG - Chr7:76415958-76415977 None:intergenic 30.0%
ATTATACATCAACTACTCCA+GGG - Chr7:76414518-76414537 None:intergenic 30.0%
ATTGAAGCTAGGTGTTAATT+GGG + Chr7:76413730-76413749 MsG0780040360.01.T01:intron 30.0%
CAAACAATGGTTCAAGATAT+TGG + Chr7:76414909-76414928 MsG0780040360.01.T01:CDS 30.0%
CAAACAATTTCTTGTCAGAT+AGG + Chr7:76417406-76417425 MsG0780040360.01.T01:intron 30.0%
CAAACATGTCATTGTATTTG+AGG - Chr7:76416359-76416378 None:intergenic 30.0%
CAGCATTGTTCATAAATTTC+TGG - Chr7:76414807-76414826 None:intergenic 30.0%
CATGAATTTGAATGTCTATG+CGG + Chr7:76413868-76413887 MsG0780040360.01.T01:intron 30.0%
CTATCTGACAAGAAATTGTT+TGG - Chr7:76417408-76417427 None:intergenic 30.0%
GAAATGAAATCATTGAAGCT+AGG + Chr7:76413719-76413738 MsG0780040360.01.T01:intron 30.0%
GAAGTAAATCGTCAAATTGA+AGG + Chr7:76417344-76417363 MsG0780040360.01.T01:intron 30.0%
GAATGCTAATAGATTTGGAT+AGG + Chr7:76416472-76416491 MsG0780040360.01.T01:intron 30.0%
GGAAACATAAATCTTCATCA+GGG - Chr7:76417447-76417466 None:intergenic 30.0%
TAATATGAGATCTCCCTAAA+AGG - Chr7:76417668-76417687 None:intergenic 30.0%
TATCAGACAACTTAATAAGG+GGG - Chr7:76417468-76417487 None:intergenic 30.0%
TTAGAAACAAATCCGAGAAA+GGG + Chr7:76416852-76416871 MsG0780040360.01.T01:intron 30.0%
! ACGAATTTTCCTGAAATCAT+GGG + Chr7:76416570-76416589 MsG0780040360.01.T01:intron 30.0%
! ACTATTCAAATTTTGTTGGG+AGG + Chr7:76416517-76416536 MsG0780040360.01.T01:CDS 30.0%
! ACTTACATTATTAGGTGTTG+TGG + Chr7:76416393-76416412 MsG0780040360.01.T01:intron 30.0%
! ATAACATTGGTTGTTTACCA+TGG + Chr7:76414125-76414144 MsG0780040360.01.T01:intron 30.0%
! CCTCATAAAACTAGTTTGAA+TGG + Chr7:76415068-76415087 MsG0780040360.01.T01:CDS 30.0%
! CTACTCTGCATTTCTTTTAA+AGG - Chr7:76416990-76417009 None:intergenic 30.0%
! CTTACATTATTAGGTGTTGT+GGG + Chr7:76416394-76416413 MsG0780040360.01.T01:intron 30.0%
! GAAGAATTCTTTTATGAGCA+AGG + Chr7:76415235-76415254 MsG0780040360.01.T01:CDS 30.0%
! GTTAAGGTATTTATCCTAAC+AGG + Chr7:76415931-76415950 MsG0780040360.01.T01:intron 30.0%
! TACGAATTTTCCTGAAATCA+TGG + Chr7:76416569-76416588 MsG0780040360.01.T01:intron 30.0%
! TGAGCTTTTGGCAAATTAAA+AGG - Chr7:76416051-76416070 None:intergenic 30.0%
! TGATGATAATGTTTCTATGG+TGG + Chr7:76417852-76417871 MsG0780040360.01.T01:three_prime_UTR 30.0%
!! GTTTTGATGGTTACAGTATA+TGG + Chr7:76417758-76417777 MsG0780040360.01.T01:three_prime_UTR 30.0%
!!! AGAAAGATTTTTTGGTGTCA+GGG + Chr7:76415295-76415314 MsG0780040360.01.T01:CDS 30.0%
!!! AGTTATGTTGTTAGCCTTTT+AGG + Chr7:76417651-76417670 MsG0780040360.01.T01:three_prime_UTR 30.0%
!!! CCATTCAAACTAGTTTTATG+AGG - Chr7:76415071-76415090 None:intergenic 30.0%
!!! CTTTTTTGTTTTCCCCTTTT+GGG + Chr7:76413254-76413273 MsG0780040360.01.T01:five_prime_UTR 30.0%
!!! GCTGATTCAGAAAGATTTTT+TGG + Chr7:76415287-76415306 MsG0780040360.01.T01:CDS 30.0%
!!! GTTATGTTGTTAGCCTTTTA+GGG + Chr7:76417652-76417671 MsG0780040360.01.T01:three_prime_UTR 30.0%
!!! GTTTTTTTGTTTCACCCAAA+AGG - Chr7:76413271-76413290 None:intergenic 30.0%
!!! TCCTTTTTTTGTGGAATCAT+TGG - Chr7:76415096-76415115 None:intergenic 30.0%
!!! TCTTTGGTTTTCAGTTTTGA+TGG + Chr7:76417745-76417764 MsG0780040360.01.T01:three_prime_UTR 30.0%
!!! TCTTTTTTGTTTTCCCCTTT+TGG + Chr7:76413253-76413272 MsG0780040360.01.T01:five_prime_UTR 30.0%
!!! TTAGTTTTTTCGTGAATGAG+TGG + Chr7:76417021-76417040 MsG0780040360.01.T01:intron 30.0%
!!! TTGTAATCTATTTTTACCCC+TGG + Chr7:76414498-76414517 MsG0780040360.01.T01:intron 30.0%
!!! TTTTGTGTAAGGTTTTGGTT+TGG + Chr7:76413570-76413589 MsG0780040360.01.T01:intron 30.0%
!!! TTTTTTGTTTCACCCAAAAG+GGG - Chr7:76413269-76413288 None:intergenic 30.0%
AAAGAATTCTTCCCATCTGT+TGG - Chr7:76415227-76415246 None:intergenic 35.0%
AAATCTTTCTGAATCAGCCA+TGG - Chr7:76415285-76415304 None:intergenic 35.0%
AACACTTATGAGACTGTTTG+AGG + Chr7:76415734-76415753 MsG0780040360.01.T01:intron 35.0%
AACATAAATCTTCATCAGGG+AGG - Chr7:76417444-76417463 None:intergenic 35.0%
AACCAAAATACAGCCAGAAA+AGG - Chr7:76414673-76414692 None:intergenic 35.0%
AAGAATTCTTCCCATCTGTT+GGG - Chr7:76415226-76415245 None:intergenic 35.0%
AATCTTTCTGAATCAGCCAT+GGG - Chr7:76415284-76415303 None:intergenic 35.0%
ACACTATGGTATGCAAACAA+TGG + Chr7:76414896-76414915 MsG0780040360.01.T01:CDS 35.0%
ACACTTATGAGACTGTTTGA+GGG + Chr7:76415735-76415754 MsG0780040360.01.T01:intron 35.0%
ACATGTAGTCCTTAATAGCT+AGG + Chr7:76417079-76417098 MsG0780040360.01.T01:intron 35.0%
ACCAAAATACAGCCAGAAAA+GGG - Chr7:76414672-76414691 None:intergenic 35.0%
AGACTTAAGCTACTATCTGA+TGG + Chr7:76414268-76414287 MsG0780040360.01.T01:intron 35.0%
AGATGGACAGAGTAAAATTC+TGG + Chr7:76414935-76414954 MsG0780040360.01.T01:CDS 35.0%
AGGACAACAAAGACCAAAAA+CGG - Chr7:76416970-76416989 None:intergenic 35.0%
AGGGAAAGGAATAATAAGGA+GGG - Chr7:76413179-76413198 None:intergenic 35.0%
AGTGCATCAATGATAAACCA+TGG - Chr7:76414145-76414164 None:intergenic 35.0%
AGTTGCCATTATCAGAGATA+GGG + Chr7:76415334-76415353 MsG0780040360.01.T01:CDS 35.0%
ATAAAGTGTATCGCCAACAA+TGG - Chr7:76414009-76414028 None:intergenic 35.0%
ATATCTGTCTAATGTTGTGG+AGG + Chr7:76417894-76417913 MsG0780040360.01.T01:three_prime_UTR 35.0%
ATTATGATCGTAGCTATGGA+AGG + Chr7:76415378-76415397 MsG0780040360.01.T01:CDS 35.0%
CAAGTTCCACTATAGCTATT+CGG - Chr7:76413977-76413996 None:intergenic 35.0%
CAGGAAAATTCGTATAAACC+TGG - Chr7:76416563-76416582 None:intergenic 35.0%
CATGTAGTCCTTAATAGCTA+GGG + Chr7:76417080-76417099 MsG0780040360.01.T01:intron 35.0%
CATTATCAGAGATAGGGAAA+AGG + Chr7:76415340-76415359 MsG0780040360.01.T01:CDS 35.0%
CATTGAAGCTAGGTGTTAAT+TGG + Chr7:76413729-76413748 MsG0780040360.01.T01:intron 35.0%
CGCATAGACATTCAAATTCA+TGG - Chr7:76413870-76413889 None:intergenic 35.0%
CTTAGAAACAAATCCGAGAA+AGG + Chr7:76416851-76416870 MsG0780040360.01.T01:intron 35.0%
GAATGAGCATACATCATTGT+AGG - Chr7:76416240-76416259 None:intergenic 35.0%
GACATTCAAATTCATGGTCA+TGG - Chr7:76413864-76413883 None:intergenic 35.0%
GACTTAAGCTACTATCTGAT+GGG + Chr7:76414269-76414288 MsG0780040360.01.T01:intron 35.0%
GCCAATGATTCCACAAAAAA+AGG + Chr7:76415092-76415111 MsG0780040360.01.T01:CDS 35.0%
GGCATCTAACATGTATTGTT+AGG + Chr7:76416641-76416660 MsG0780040360.01.T01:intron 35.0%
GGGAAACATAAATCTTCATC+AGG - Chr7:76417448-76417467 None:intergenic 35.0%
GGTAAACAGCATGTCTAAAT+TGG - Chr7:76416269-76416288 None:intergenic 35.0%
GTACAAAAAGGACTCATCAT+CGG - Chr7:76416165-76416184 None:intergenic 35.0%
TAATGACCAATAGTGTCATG+CGG - Chr7:76417108-76417127 None:intergenic 35.0%
TACAAAAAGGACTCATCATC+GGG - Chr7:76416164-76416183 None:intergenic 35.0%
TACAAAGAGTGGTCAAATAG+CGG + Chr7:76414031-76414050 MsG0780040360.01.T01:intron 35.0%
TAGTCTGAGCTTATGAGTTA+TGG - Chr7:76414557-76414576 None:intergenic 35.0%
TATTATATCTAGGCCCTGTT+AGG - Chr7:76415948-76415967 None:intergenic 35.0%
TATTTCAGATAAGCGAACCA+CGG - Chr7:76414988-76415007 None:intergenic 35.0%
TCTGTGTTTGTGAGAGATAA+AGG + Chr7:76415523-76415542 MsG0780040360.01.T01:intron 35.0%
TGAAATACCTGCTAAACAGT+TGG + Chr7:76415001-76415020 MsG0780040360.01.T01:CDS 35.0%
TGTGAATAGTCAAAGCTCAA+TGG - Chr7:76417584-76417603 None:intergenic 35.0%
TGTGAGAGATAAAGGATGTT+GGG + Chr7:76415531-76415550 MsG0780040360.01.T01:intron 35.0%
TGTTGATGCAAAACATTGTC+TGG + Chr7:76414240-76414259 MsG0780040360.01.T01:intron 35.0%
TTAGATGATATTAGGGAGGA+AGG + Chr7:76417610-76417629 MsG0780040360.01.T01:exon 35.0%
TTATACATCAACTACTCCAG+GGG - Chr7:76414517-76414536 None:intergenic 35.0%
TTGAAGCTAGGTGTTAATTG+GGG + Chr7:76413731-76413750 MsG0780040360.01.T01:intron 35.0%
TTGTGAGAGATAAAGGATGT+TGG + Chr7:76415530-76415549 MsG0780040360.01.T01:intron 35.0%
! ATTTAGACATGCTGTTTACC+AGG + Chr7:76416269-76416288 MsG0780040360.01.T01:CDS 35.0%
! CTTTTCCCTATCTCTGATAA+TGG - Chr7:76415342-76415361 None:intergenic 35.0%
! GATTAGCTCGTAATGATGAA+GGG + Chr7:76413903-76413922 MsG0780040360.01.T01:intron 35.0%
! GTCTATGCGGTTGAATTTTA+AGG + Chr7:76413881-76413900 MsG0780040360.01.T01:intron 35.0%
! GTTTGGATTAGAATCTGTGT+AGG + Chr7:76413587-76413606 MsG0780040360.01.T01:intron 35.0%
! TCATGGGTTTGCTTCAAAAT+TGG + Chr7:76413480-76413499 MsG0780040360.01.T01:intron 35.0%
! TGATGATGATTGACATGTTC+AGG - Chr7:76416887-76416906 None:intergenic 35.0%
! TTGGTACTTTAGCTCGATTT+AGG + Chr7:76413499-76413518 MsG0780040360.01.T01:intron 35.0%
! TTTTTCGCTGGCATGTTAAA+TGG + Chr7:76415574-76415593 MsG0780040360.01.T01:intron 35.0%
!! CGATTTAGGTTTGACCTTTT+TGG + Chr7:76413513-76413532 MsG0780040360.01.T01:intron 35.0%
!! GTTCAAGATATTGGCTTAGA+TGG + Chr7:76414918-76414937 MsG0780040360.01.T01:CDS 35.0%
!! TGTATCTTTAGTTCTGCGTA+TGG + Chr7:76414771-76414790 MsG0780040360.01.T01:intron 35.0%
!! TTTTTAAGCCATGAAACGCA+GGG - Chr7:76414188-76414207 None:intergenic 35.0%
!!! ATGACATGTCTTTTTTTCGC+TGG + Chr7:76415562-76415581 MsG0780040360.01.T01:intron 35.0%
!!! CAGAAAGATTTTTTGGTGTC+AGG + Chr7:76415294-76415313 MsG0780040360.01.T01:CDS 35.0%
!!! CATTTTAACTTCCCCTTTTC+TGG + Chr7:76414657-76414676 MsG0780040360.01.T01:intron 35.0%
!!! CTAGTTTTAATCTCAACCGT+TGG + Chr7:76417217-76417236 MsG0780040360.01.T01:intron 35.0%
AAAGTGACACCCATGATTTC+AGG - Chr7:76416582-76416601 None:intergenic 40.0%
AACAAAGACCAAAAACGGCA+CGG - Chr7:76416965-76416984 None:intergenic 40.0%
AAGAACCATGGATTCATCGT+TGG + Chr7:76413306-76413325 MsG0780040360.01.T01:exon 40.0%
AAGCTCAATGGTTGACCAAA+TGG - Chr7:76417572-76417591 None:intergenic 40.0%
AATAGGTGGTCACACTAAAG+AGG - Chr7:76417147-76417166 None:intergenic 40.0%
ACAAAAAGGACTCATCATCG+GGG - Chr7:76416163-76416182 None:intergenic 40.0%
ACAGAAACAAGGGTCTATAG+AGG - Chr7:76417709-76417728 None:intergenic 40.0%
AGAAACCAACGATGAATCCA+TGG - Chr7:76413314-76413333 None:intergenic 40.0%
ATCTTTCTGAATCAGCCATG+GGG - Chr7:76415283-76415302 None:intergenic 40.0%
ATTTCAGATAAGCGAACCAC+GGG - Chr7:76414987-76415006 None:intergenic 40.0%
ATTTCCTTGTGGGAATGACT+TGG + Chr7:76416438-76416457 MsG0780040360.01.T01:intron 40.0%
CAAAAATGGACACTTGACAC+TGG - Chr7:76414344-76414363 None:intergenic 40.0%
CCAAAATACAGCCAGAAAAG+GGG - Chr7:76414671-76414690 None:intergenic 40.0%
CCAGATTATGATCGTAGCTA+TGG + Chr7:76415374-76415393 MsG0780040360.01.T01:CDS 40.0%
CCATAGCTACGATCATAATC+TGG - Chr7:76415377-76415396 None:intergenic 40.0%
CTTGAACAAATCGCCATTGT+TGG + Chr7:76413993-76414012 MsG0780040360.01.T01:intron 40.0%
GAAACTAACTGGTTAGACGA+TGG - Chr7:76413414-76413433 None:intergenic 40.0%
GAAGAGCCTCAACCAAAAAA+GGG - Chr7:76413381-76413400 None:intergenic 40.0%
GAGGGAAAGGAATAATAAGG+AGG - Chr7:76413180-76413199 None:intergenic 40.0%
GAGTTGCCATTATCAGAGAT+AGG + Chr7:76415333-76415352 MsG0780040360.01.T01:CDS 40.0%
GCATACATCATTGTAGGACT+TGG - Chr7:76416234-76416253 None:intergenic 40.0%
GCTATAACACTCTAGCATAG+TGG + Chr7:76414064-76414083 MsG0780040360.01.T01:intron 40.0%
GTTTCATACGGAGCAAATGA+AGG - Chr7:76416075-76416094 None:intergenic 40.0%
TAAACTATCCTGAGAGCTGA+TGG - Chr7:76415812-76415831 None:intergenic 40.0%
TCATTGTCCAACTGTTTAGC+AGG - Chr7:76415011-76415030 None:intergenic 40.0%
TCCTTTCCCTCATTCTTAGA+GGG + Chr7:76413189-76413208 MsG0780040360.01.T01:five_prime_UTR 40.0%
TCTTCAACAAACTTAGGGCT+AGG - Chr7:76413807-76413826 None:intergenic 40.0%
TGAAACTAGCAAAATCCCCA+TGG + Chr7:76415265-76415284 MsG0780040360.01.T01:CDS 40.0%
TGAAGAGCCTCAACCAAAAA+AGG - Chr7:76413382-76413401 None:intergenic 40.0%
TGAAGCTAGGTGTTAATTGG+GGG + Chr7:76413732-76413751 MsG0780040360.01.T01:intron 40.0%
TGATATTAGGGAGGAAGGTT+TGG + Chr7:76417615-76417634 MsG0780040360.01.T01:three_prime_UTR 40.0%
TGGCATGTTAAATGGAACTC+TGG + Chr7:76415582-76415601 MsG0780040360.01.T01:intron 40.0%
TGTGAGGCTCATACTCATAT+TGG + Chr7:76414298-76414317 MsG0780040360.01.T01:intron 40.0%
TTCAATCCTGGGGTACAAAA+AGG - Chr7:76416177-76416196 None:intergenic 40.0%
TTCCTTTCCCTCATTCTTAG+AGG + Chr7:76413188-76413207 MsG0780040360.01.T01:five_prime_UTR 40.0%
TTGTTGCCGAATAGCTATAG+TGG + Chr7:76413968-76413987 MsG0780040360.01.T01:intron 40.0%
! ACACGATGATTGACGTGTTT+TGG - Chr7:76416825-76416844 None:intergenic 40.0%
! AGGTTTTCTCTACCCTTTCT+CGG - Chr7:76416867-76416886 None:intergenic 40.0%
! CTAACAACGATGTTGCTTCT+GGG + Chr7:76413332-76413351 MsG0780040360.01.T01:CDS 40.0%
! GCAAATGAAGGTTGAGCTTT+TGG - Chr7:76416063-76416082 None:intergenic 40.0%
! GCAAGAGCACGTATCTTTAA+TGG + Chr7:76415161-76415180 MsG0780040360.01.T01:CDS 40.0%
! TACCATAGTGTTGAGCAACA+CGG - Chr7:76414887-76414906 None:intergenic 40.0%
! TCTAACAACGATGTTGCTTC+TGG + Chr7:76413331-76413350 MsG0780040360.01.T01:CDS 40.0%
! TTCAGTTGATACCTCATCCA+TGG + Chr7:76415199-76415218 MsG0780040360.01.T01:CDS 40.0%
! TTCCTTCCCTCTAAGAATGA+GGG - Chr7:76413198-76413217 None:intergenic 40.0%
! TTTCCTTCCCTCTAAGAATG+AGG - Chr7:76413199-76413218 None:intergenic 40.0%
! TTTTAAGCCATGAAACGCAG+GGG - Chr7:76414187-76414206 None:intergenic 40.0%
! TTTTTCGTGAATGAGTGGAG+AGG + Chr7:76417026-76417045 MsG0780040360.01.T01:intron 40.0%
!! ATTGTTGGTTCAGGTATGCT+AGG + Chr7:76415995-76416014 MsG0780040360.01.T01:intron 40.0%
!! CTTTTTAAGCCATGAAACGC+AGG - Chr7:76414189-76414208 None:intergenic 40.0%
!! GGATTAGCTCGTAATGATGA+AGG + Chr7:76413902-76413921 MsG0780040360.01.T01:intron 40.0%
!! GTTGGGATTGTTTGTTTCTG+TGG + Chr7:76413697-76413716 MsG0780040360.01.T01:intron 40.0%
!! TGGGTTTGTTAAGGAGTCAA+TGG + Chr7:76413351-76413370 MsG0780040360.01.T01:CDS 40.0%
!! TGTTGCTTCTGGGTTTGTTA+AGG + Chr7:76413342-76413361 MsG0780040360.01.T01:CDS 40.0%
!! TTGGCAAATTAAAAGGCACC+AGG - Chr7:76416044-76416063 None:intergenic 40.0%
!!! CAGAGGGTTTCCTTTTTTTG+TGG - Chr7:76415105-76415124 None:intergenic 40.0%
!!! GTCAATGGTTGACCCTTTTT+TGG + Chr7:76413366-76413385 MsG0780040360.01.T01:CDS 40.0%
AAGCTACTATCTGATGGGAC+TGG + Chr7:76414274-76414293 MsG0780040360.01.T01:intron 45.0%
ACTGTGACATGTTTGGTTGG+CGG + Chr7:76416757-76416776 MsG0780040360.01.T01:intron 45.0%
AGCAGCTCAATCACAATCTC+AGG - Chr7:76414463-76414482 None:intergenic 45.0%
AGTGGTCAAATAGCGGCTAT+AGG + Chr7:76414038-76414057 MsG0780040360.01.T01:intron 45.0%
CAGGGCCTAGATATAATAGC+TGG + Chr7:76415950-76415969 MsG0780040360.01.T01:intron 45.0%
CCAGTCGGAGATAAGAAGAA+GGG - Chr7:76414857-76414876 None:intergenic 45.0%
GACTACCCTCACTAAAACTG+CGG + Chr7:76416620-76416639 MsG0780040360.01.T01:intron 45.0%
GCTCAAGCTTCACTTGGATA+TGG + Chr7:76416126-76416145 MsG0780040360.01.T01:CDS 45.0%
GCTTATTTCCATCAGCTCTC+AGG + Chr7:76415801-76415820 MsG0780040360.01.T01:intron 45.0%
TCCACTGTGACATGTTTGGT+TGG + Chr7:76416754-76416773 MsG0780040360.01.T01:intron 45.0%
TCGTACAATTTCCAGCTCCA+CGG - Chr7:76414427-76414446 None:intergenic 45.0%
TCTCTTCCACACTTCTCAGA+GGG - Chr7:76415121-76415140 None:intergenic 45.0%
TGTGTCCACTGTGACATGTT+TGG + Chr7:76416750-76416769 MsG0780040360.01.T01:intron 45.0%
TTCCCTCATTCTTAGAGGGA+AGG + Chr7:76413193-76413212 MsG0780040360.01.T01:five_prime_UTR 45.0%
TTGTACCCCAGGATTGAATC+CGG + Chr7:76416179-76416198 MsG0780040360.01.T01:CDS 45.0%
TTGTAGGACTTGGCCATTGT+AGG - Chr7:76416224-76416243 None:intergenic 45.0%
TTTAAGCCATGAAACGCAGG+GGG - Chr7:76414186-76414205 None:intergenic 45.0%
TTTACATAAGACCGTGGAGC+TGG + Chr7:76414413-76414432 MsG0780040360.01.T01:intron 45.0%
! AGAGGAAGGAGGAGTATGAT+CGG + Chr7:76415138-76415157 MsG0780040360.01.T01:CDS 45.0%
! ATGAGTCCTTTTTGTACCCC+AGG + Chr7:76416168-76416187 MsG0780040360.01.T01:CDS 45.0%
! TCCCTCTAAGAATGAGGGAA+AGG - Chr7:76413193-76413212 None:intergenic 45.0%
!! AGATGCCGCAGTTTTAGTGA+GGG - Chr7:76416628-76416647 None:intergenic 45.0%
!! AGTTTTAGTGAGGGTAGTCG+GGG - Chr7:76416619-76416638 None:intergenic 45.0%
!! CAGTTTTAGTGAGGGTAGTC+GGG - Chr7:76416620-76416639 None:intergenic 45.0%
!! GCAGTTTTAGTGAGGGTAGT+CGG - Chr7:76416621-76416640 None:intergenic 45.0%
!! TAGATGCCGCAGTTTTAGTG+AGG - Chr7:76416629-76416648 None:intergenic 45.0%
!! TCTCTGATAATGGCAACTCG+AGG - Chr7:76415332-76415351 None:intergenic 45.0%
!!! CCCCTTTTCTGGCTGTATTT+TGG + Chr7:76414668-76414687 MsG0780040360.01.T01:intron 45.0%
!!! GCTGCTTTTCAGTCTCCATT+TGG + Chr7:76417554-76417573 MsG0780040360.01.T01:intron 45.0%
!!! GGTTGACCCTTTTTTGGTTG+AGG + Chr7:76413372-76413391 MsG0780040360.01.T01:CDS 45.0%
!!! ATCTTTTATTAAAAAATTAA+AGG - Chr7:76417175-76417194 None:intergenic 5.0%
AAGTGTGGAAGAGAGGAAGG+AGG + Chr7:76415127-76415146 MsG0780040360.01.T01:CDS 50.0%
AATCCAACTGCCATCCTCCA+CGG - Chr7:76414589-76414608 None:intergenic 50.0%
ACCACGGGATACTTGCTTTC+AGG - Chr7:76414972-76414991 None:intergenic 50.0%
ACCTGAAAGCAAGTATCCCG+TGG + Chr7:76414968-76414987 MsG0780040360.01.T01:CDS 50.0%
AGAGCCAAGTCATTCCCACA+AGG - Chr7:76416445-76416464 None:intergenic 50.0%
AGATGCCGGATTCAATCCTG+GGG - Chr7:76416187-76416206 None:intergenic 50.0%
AGCTCCACACCTATTGAACG+TGG - Chr7:76416784-76416803 None:intergenic 50.0%
AGGATTGAATCCGGCATCTG+GGG + Chr7:76416188-76416207 MsG0780040360.01.T01:CDS 50.0%
ATCAGCCTCTGCTGTTAACC+TGG + Chr7:76416023-76416042 MsG0780040360.01.T01:CDS 50.0%
ATCTGTTGGGACCATGGATG+AGG - Chr7:76415213-76415232 None:intergenic 50.0%
CAGATGCCGGATTCAATCCT+GGG - Chr7:76416188-76416207 None:intergenic 50.0%
CAGGATTGAATCCGGCATCT+GGG + Chr7:76416187-76416206 MsG0780040360.01.T01:CDS 50.0%
CATCCATGGTCCCAACAGAT+GGG + Chr7:76415213-76415232 MsG0780040360.01.T01:CDS 50.0%
CCAAGTGAAGCTTGAGCTTG+TGG - Chr7:76416123-76416142 None:intergenic 50.0%
CCACAAGCTCAAGCTTCACT+TGG + Chr7:76416120-76416139 MsG0780040360.01.T01:CDS 50.0%
CCCTTCTTCTTATCTCCGAC+TGG + Chr7:76414854-76414873 MsG0780040360.01.T01:CDS 50.0%
CGTGAATGAGTGGAGAGGTA+GGG + Chr7:76417031-76417050 MsG0780040360.01.T01:intron 50.0%
CTCTCTTCCACACTTCTCAG+AGG - Chr7:76415122-76415141 None:intergenic 50.0%
CTGTGACATGTTTGGTTGGC+GGG + Chr7:76416758-76416777 MsG0780040360.01.T01:intron 50.0%
GACTCTGTCTTTGGCAACAG+TGG - Chr7:76416941-76416960 None:intergenic 50.0%
GCCAACCAAACATGTCACAG+TGG - Chr7:76416758-76416777 None:intergenic 50.0%
GCCAGTCGGAGATAAGAAGA+AGG - Chr7:76414858-76414877 None:intergenic 50.0%
GGGATGGTGCTTACCTACAA+TGG + Chr7:76416208-76416227 MsG0780040360.01.T01:CDS 50.0%
TAACTGGTTAGACGATGGCG+AGG - Chr7:76413409-76413428 None:intergenic 50.0%
TAGGGAGGAAGGTTTGGACT+TGG + Chr7:76417621-76417640 MsG0780040360.01.T01:three_prime_UTR 50.0%
TCAGACTAGTAGCCATTCCG+TGG + Chr7:76414569-76414588 MsG0780040360.01.T01:intron 50.0%
TCATCCATGGTCCCAACAGA+TGG + Chr7:76415212-76415231 MsG0780040360.01.T01:CDS 50.0%
TCGTGAATGAGTGGAGAGGT+AGG + Chr7:76417030-76417049 MsG0780040360.01.T01:intron 50.0%
TCTGTCTTTGGCAACAGTGG+AGG - Chr7:76416938-76416957 None:intergenic 50.0%
TTCAATAGGTGTGGAGCTCG+TGG + Chr7:76416786-76416805 MsG0780040360.01.T01:intron 50.0%
! AGGAAACCCTCTGAGAAGTG+TGG + Chr7:76415112-76415131 MsG0780040360.01.T01:CDS 50.0%
! CACCGTGTTGCTCAACACTA+TGG + Chr7:76414882-76414901 MsG0780040360.01.T01:CDS 50.0%
! CTCTGAGAAGTGTGGAAGAG+AGG + Chr7:76415120-76415139 MsG0780040360.01.T01:CDS 50.0%
! GAGAAGTGTGGAAGAGAGGA+AGG + Chr7:76415124-76415143 MsG0780040360.01.T01:CDS 50.0%
! GAGGAAGGAGGAGTATGATC+GGG + Chr7:76415139-76415158 MsG0780040360.01.T01:CDS 50.0%
!! AAAGAGGCACTACAGCTGAG+CGG - Chr7:76417131-76417150 None:intergenic 50.0%
!! ATCTGATGGGACTGGTTGTG+AGG + Chr7:76414282-76414301 MsG0780040360.01.T01:intron 50.0%
AACTGCCATCCTCCACGGAA+TGG - Chr7:76414584-76414603 None:intergenic 55.0%
AGGCACCAGGTTAACAGCAG+AGG - Chr7:76416031-76416050 None:intergenic 55.0%
AGTAGCCATTCCGTGGAGGA+TGG + Chr7:76414576-76414595 MsG0780040360.01.T01:intron 55.0%
ATTCCGTGGAGGATGGCAGT+TGG + Chr7:76414583-76414602 MsG0780040360.01.T01:intron 55.0%
CCAGATGCCGGATTCAATCC+TGG - Chr7:76416189-76416208 None:intergenic 55.0%
CCAGGATTGAATCCGGCATC+TGG + Chr7:76416186-76416205 MsG0780040360.01.T01:CDS 55.0%
CTCATCATCGGGGTTGAAGG+CGG - Chr7:76416153-76416172 None:intergenic 55.0%
CTGTCAACCGCCCACTTAGT+TGG + Chr7:76416701-76416720 MsG0780040360.01.T01:intron 55.0%
CTTCCCATCTGTTGGGACCA+TGG - Chr7:76415219-76415238 None:intergenic 55.0%
GACTAGTAGCCATTCCGTGG+AGG + Chr7:76414572-76414591 MsG0780040360.01.T01:intron 55.0%
GCCGCGTTCACCAACTAAGT+GGG - Chr7:76416714-76416733 None:intergenic 55.0%
GCGTTCACCAACTAAGTGGG+CGG - Chr7:76416711-76416730 None:intergenic 55.0%
GGACTCATCATCGGGGTTGA+AGG - Chr7:76416156-76416175 None:intergenic 55.0%
TAAGCACCATCCCCAGATGC+CGG - Chr7:76416201-76416220 None:intergenic 55.0%
TGCCGCGTTCACCAACTAAG+TGG - Chr7:76416715-76416734 None:intergenic 55.0%
TTGAATCCGGCATCTGGGGA+TGG + Chr7:76416192-76416211 MsG0780040360.01.T01:CDS 55.0%
!! CTTAGTTGGTGAACGCGGCA+TGG + Chr7:76416715-76416734 MsG0780040360.01.T01:intron 55.0%
!! GCCCACTTAGTTGGTGAACG+CGG + Chr7:76416710-76416729 MsG0780040360.01.T01:intron 55.0%
AGCCATGAAACGCAGGGGGA+AGG - Chr7:76414182-76414201 None:intergenic 60.0%
CAACACGGTGTGCAGCCAGT+CGG - Chr7:76414872-76414891 None:intergenic 60.0%
CCATGAAACGCAGGGGGAAG+GGG - Chr7:76414180-76414199 None:intergenic 60.0%
CGGGCCACGTTCAATAGGTG+TGG + Chr7:76416777-76416796 MsG0780040360.01.T01:intron 60.0%
GCAGGGGGAAGGGGAAAGTA+GGG - Chr7:76414171-76414190 None:intergenic 60.0%
GCCATGAAACGCAGGGGGAA+GGG - Chr7:76414181-76414200 None:intergenic 60.0%
GTGAGGGTAGTCGGGGAAGT+AGG - Chr7:76416612-76416631 None:intergenic 60.0%
! GTTGGCGGGCCACGTTCAAT+AGG + Chr7:76416772-76416791 MsG0780040360.01.T01:intron 60.0%
!!! CAGAGTCGCCGTGCCGTTTT+TGG + Chr7:76416954-76416973 MsG0780040360.01.T01:intron 60.0%
AACGCGGCATGGCAGAGCAG+CGG + Chr7:76416726-76416745 MsG0780040360.01.T01:intron 65.0%
CCCCTTCCCCCTGCGTTTCA+TGG + Chr7:76414177-76414196 MsG0780040360.01.T01:intron 65.0%
CGCAGGGGGAAGGGGAAAGT+AGG - Chr7:76414172-76414191 None:intergenic 65.0%
CGGCACGGCGACTCTGTCTT+TGG - Chr7:76416950-76416969 None:intergenic 65.0%
GGGGGAAGGGGAAAGTAGGG+AGG - Chr7:76414168-76414187 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 76413108 76417946 76413108 ID=MsG0780040360.01;Name=MsG0780040360.01
Chr7 mRNA 76413108 76417946 76413108 ID=MsG0780040360.01.T01;Parent=MsG0780040360.01;Name=MsG0780040360.01.T01;_AED=0.43;_eAED=0.49;_QI=205|0.25|0.4|1|0.25|0|5|333|390
Chr7 exon 76413108 76413424 76413108 ID=MsG0780040360.01.T01:exon:14573;Parent=MsG0780040360.01.T01
Chr7 exon 76414844 76415399 76414844 ID=MsG0780040360.01.T01:exon:14574;Parent=MsG0780040360.01.T01
Chr7 exon 76416008 76416373 76416008 ID=MsG0780040360.01.T01:exon:14575;Parent=MsG0780040360.01.T01
Chr7 exon 76416473 76416563 76416473 ID=MsG0780040360.01.T01:exon:14576;Parent=MsG0780040360.01.T01
Chr7 exon 76417566 76417946 76417566 ID=MsG0780040360.01.T01:exon:14577;Parent=MsG0780040360.01.T01
Chr7 five_prime_UTR 76413108 76413312 76413108 ID=MsG0780040360.01.T01:five_prime_utr;Parent=MsG0780040360.01.T01
Chr7 CDS 76413313 76413424 76413313 ID=MsG0780040360.01.T01:cds;Parent=MsG0780040360.01.T01
Chr7 CDS 76414844 76415399 76414844 ID=MsG0780040360.01.T01:cds;Parent=MsG0780040360.01.T01
Chr7 CDS 76416008 76416373 76416008 ID=MsG0780040360.01.T01:cds;Parent=MsG0780040360.01.T01
Chr7 CDS 76416473 76416563 76416473 ID=MsG0780040360.01.T01:cds;Parent=MsG0780040360.01.T01
Chr7 CDS 76417566 76417613 76417566 ID=MsG0780040360.01.T01:cds;Parent=MsG0780040360.01.T01
Chr7 three_prime_UTR 76417614 76417946 76417614 ID=MsG0780040360.01.T01:three_prime_utr;Parent=MsG0780040360.01.T01
Gene Sequence

>MsG0780040360.01.T01

ATGGATTCATCGTTGGTTTCTAACAACGATGTTGCTTCTGGGTTTGTTAAGGAGTCAATGGTTGACCCTTTTTTGGTTGAGGCTCTTCAGAATCCTCGCCATCGTCTAACCATTTCAACATTCCCTTCTTCTTATCTCCGACTGGCTGCACACCGTGTTGCTCAACACTATGGTATGCAAACAATGGTTCAAGATATTGGCTTAGATGGACAGAGTAAAATTCTGGTCAGAAAGTTACCTGAAAGCAAGTATCCCGTGGTTCGCTTATCTGAAATACCTGCTAAACAGTTGGACAATGAGAAATCCGAGCTGAAAAAAATTGTCATACAATCTAGGCCTCATAAAACTAGTTTGAATGGAGCCAATGATTCCACAAAAAAAGGAAACCCTCTGAGAAGTGTGGAAGAGAGGAAGGAGGAGTATGATCGGGCAAGAGCACGTATCTTTAATGGCTCTACAAGCTTTGATTCAGTTGATACCTCATCCATGGTCCCAACAGATGGGAAGAATTCTTTTATGAGCAAGGATGAGAGTGAAACTAGCAAAATCCCCATGGCTGATTCAGAAAGATTTTTTGGTGTCAGGGATAATAGTTATCCTCGAGTTGCCATTATCAGAGATAGGGAAAAGGATCGAAGTGATCCAGATTATGATCGTAGCTATGGAAGGTATGCTAGGAGTTTATCAGCCTCTGCTGTTAACCTGGTGCCTTTTAATTTGCCAAAAGCTCAACCTTCATTTGCTCCGTATGAAACTACTTTTAATCAGTTGGGTCAGATGCCACAAGCTCAAGCTTCACTTGGATATGGACCGCCTTCAACCCCGATGATGAGTCCTTTTTGTACCCCAGGATTGAATCCGGCATCTGGGGATGGTGCTTACCTACAATGGCCAAGTCCTACAATGATGTATGCTCATTCATATGACCAATTTAGACATGCTGTTTACCAGGTAAACCACATTTATTTTACTCAATTTTTTACTATGTTGAATTTGATGAGTGATTTCTGTACTAGCCTCAAATACAATGACATAATGCTAATAGATTTGGATAGGCTATTTCAATTCTCCAACTTGCACTATTCAAATTTTGTTGGGAGGTGCTTTAATTTTATAGTTTTCCAGTCTCCATTTGGTCAACCATTGAGCTTTGACTATTCACAGAACTATTAG

Protein sequence

>MsG0780040360.01.T01

MDSSLVSNNDVASGFVKESMVDPFLVEALQNPRHRLTISTFPSSYLRLAAHRVAQHYGMQTMVQDIGLDGQSKILVRKLPESKYPVVRLSEIPAKQLDNEKSELKKIVIQSRPHKTSLNGANDSTKKGNPLRSVEERKEEYDRARARIFNGSTSFDSVDTSSMVPTDGKNSFMSKDESETSKIPMADSERFFGVRDNSYPRVAIIRDREKDRSDPDYDRSYGRYARSLSASAVNLVPFNLPKAQPSFAPYETTFNQLGQMPQAQASLGYGPPSTPMMSPFCTPGLNPASGDGAYLQWPSPTMMYAHSYDQFRHAVYQVNHIYFTQFFTMLNLMSDFCTSLKYNDIMLIDLDRLFQFSNLHYSNFVGRCFNFIVFQSPFGQPLSFDYSQNY*