AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0012020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0012020 MtrunA17_Chr1g0161031 91.781 365 15 2 1 354 1 361 0.0 654
Msa0012020 MtrunA17_Chr6g0478581 28.675 415 183 15 1 326 1 391 2.70e-23 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0012020 AT3G17860.1 33.149 362 176 16 1 326 1 332 6.84e-27 109
Msa0012020 AT3G17860.2 31.832 333 173 14 27 326 8 319 7.34e-23 98.2
Msa0012020 AT3G17860.3 32.188 320 166 13 37 326 1 299 8.29e-23 97.8
Msa0012020 AT3G17860.4 32.188 320 166 13 37 326 1 299 8.29e-23 97.8
Msa0012020 AT1G48500.1 28.824 340 177 10 1 326 1 289 9.38e-19 85.9
Msa0012020 AT1G70700.1 33.203 256 113 11 102 345 58 267 8.65e-17 79.7
Msa0012020 AT1G70700.3 32.589 224 95 10 102 313 58 237 9.23e-13 68.2

Find 109 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGTTAGGAGGATATATT+TGG 0.169181 1_1:-18106993 Msa0012020:three_prime_UTR
TTGAAAAGTAAACTCTTATT+AGG 0.200819 1_1:-18106896 Msa0012020:three_prime_UTR
AAGTAGCAGTGATGAGTTTA+TGG 0.220743 1_1:-18108537 Msa0012020:CDS
TCGTCTTCAGAAACTTTAAA+AGG 0.263599 1_1:+18110006 None:intergenic
CGAATGTTTCAGCAGTAAAA+TGG 0.266336 1_1:-18110068 Msa0012020:CDS
GATTTCTTGTTGAGGTTATA+TGG 0.291399 1_1:+18107462 None:intergenic
TGATATTCTAAAGATATTTC+AGG 0.304355 1_1:+18106871 None:intergenic
ATGTCTACAGGTGGACTTAT+AGG 0.310065 1_1:+18108632 None:intergenic
GAGCTAGATGCCTGAACTTC+AGG 0.316257 1_1:+18108683 None:intergenic
CCGATCGTTGGTACTGTTGC+TGG 0.321376 1_1:-18109319 Msa0012020:CDS
AGAAAGTGAATTTGCTTGAT+TGG 0.344513 1_1:+18109459 None:intergenic
CCCCACAACAAATTATTTAA+GGG 0.355484 1_1:+18107191 None:intergenic
CGTTGGTACTGTTGCTGGTT+TGG 0.366943 1_1:-18109314 Msa0012020:CDS
GAATCCAACCACTTAATATA+AGG 0.369010 1_1:+18107161 None:intergenic
TTATCTGTTTCTTCACATAC+TGG 0.372825 1_1:-18108581 Msa0012020:CDS
TCGAGCCAATGATGCTTTGC+GGG 0.375285 1_1:+18108256 None:intergenic
GCTTATCTGCAGCTTCAAAC+AGG 0.376253 1_1:-18108712 Msa0012020:CDS
GAATTTGCTTGATTGGAAAC+TGG 0.385359 1_1:+18109466 None:intergenic
AATGTATATATATCTGATCT+TGG 0.386452 1_1:+18107045 None:intergenic
TAAAGTTTCTGAAGACGATA+AGG 0.398360 1_1:-18110001 Msa0012020:CDS
GACCCTTCATTGTTAATCTC+AGG 0.410284 1_1:+18110790 None:intergenic
AAGGCTAAAATGATATCTTC+TGG 0.412380 1_1:-18109982 Msa0012020:CDS
AGAAAATAGGGATGTGGTTG+AGG 0.415244 1_1:-18106959 Msa0012020:three_prime_UTR
CAGGGCTCAACCTGAAGTTC+AGG 0.416821 1_1:-18108693 Msa0012020:CDS
CATATGTATGTTTGATACAT+AGG 0.419348 1_1:-18107223 Msa0012020:three_prime_UTR
ATGTTAGCACCTATTGAATT+CGG 0.423665 1_1:+18107423 None:intergenic
GTGGTTGCATTGACTACTTT+GGG 0.425771 1_1:+18108458 None:intergenic
GGGTCTTACCTTATATTAAG+TGG 0.426315 1_1:-18107169 Msa0012020:three_prime_UTR
GATATCTTCTGGTTTCATAC+AGG 0.429332 1_1:-18109971 Msa0012020:intron
GCAGGCCCGCAAAGCATCAT+TGG 0.432249 1_1:-18108261 Msa0012020:CDS
TCCCTTAAATAATTTGTTGT+GGG 0.442794 1_1:-18107192 Msa0012020:three_prime_UTR
GCACAAATGCCGAATTCAAT+AGG 0.448545 1_1:-18107432 Msa0012020:CDS
GGTGGTTGCATTGACTACTT+TGG 0.451731 1_1:+18108457 None:intergenic
AAATTCACATTGTGTTGTAC+AGG 0.451805 1_1:+18109520 None:intergenic
GAGTAACTCCTTCTTATAGA+AGG 0.456364 1_1:-18107347 Msa0012020:three_prime_UTR
CAAGCAGATGTTGTAGGAGT+AGG 0.457532 1_1:+18108494 None:intergenic
GGCACAAGCCATCATGTTGT+TGG 0.459085 1_1:-18108744 Msa0012020:CDS
AAACTTACCTCATTGCTTGG+TGG 0.467237 1_1:-18106926 Msa0012020:three_prime_UTR
AAAAGTAGGATATCTCTGTT+AGG 0.469099 1_1:-18107006 Msa0012020:three_prime_UTR
AGGACTTGAAATACCAGAGC+AGG 0.472355 1_1:+18108604 None:intergenic
CTGCTACTTGAGCCACTCCC+TGG 0.474711 1_1:+18108551 None:intergenic
AGCAGAGACTTTGTTCAAGA+AGG 0.476877 1_1:+18110044 None:intergenic
TGTTATCCTTGGTTTGCTAC+CGG 0.482361 1_1:+18107372 None:intergenic
ACTTTGCAAGCAGATGTTGT+AGG 0.484196 1_1:+18108488 None:intergenic
CCTTAAATAATTTGTTGTGG+GGG 0.484319 1_1:-18107190 Msa0012020:three_prime_UTR
TTCCCTTAAATAATTTGTTG+TGG 0.487035 1_1:-18107193 Msa0012020:three_prime_UTR
CTTACCTTATATTAAGTGGT+TGG 0.487092 1_1:-18107165 Msa0012020:three_prime_UTR
TCACATACTGGTCCACAGCC+AGG 0.488582 1_1:-18108569 Msa0012020:CDS
CTTAAATAATTTGTTGTGGG+GGG 0.493779 1_1:-18107189 Msa0012020:three_prime_UTR
CTTGAGCCACTCCCTGGCTG+TGG 0.494035 1_1:+18108557 None:intergenic
GTATGTGAAGAAACAGATAA+AGG 0.494684 1_1:+18108584 None:intergenic
ATCATGTTGTTGGCTGGAAG+TGG 0.494803 1_1:-18108734 Msa0012020:CDS
ATCGAGCCAATGATGCTTTG+CGG 0.499003 1_1:+18108255 None:intergenic
CAAGCCATCATGTTGTTGGC+TGG 0.503763 1_1:-18108740 Msa0012020:CDS
TTGAAACTTACCTCATTGCT+TGG 0.503780 1_1:-18106929 Msa0012020:three_prime_UTR
AATGCGAAGCAATCACTACT+TGG 0.504587 1_1:-18109376 Msa0012020:CDS
GAGTTACTCACTGTTATCCT+TGG 0.504866 1_1:+18107361 None:intergenic
CCCTTAAATAATTTGTTGTG+GGG 0.508409 1_1:-18107191 Msa0012020:three_prime_UTR
TGTCAGATTTAGTTACATAA+CGG 0.513985 1_1:+18107098 None:intergenic
TAGAAGGAGACTACATAAGA+TGG 0.514753 1_1:-18107331 Msa0012020:three_prime_UTR
GCAACCACCATGGTTCCATC+AGG 0.516533 1_1:-18108443 Msa0012020:intron
ATTTCAAGAAAATAGGGATG+TGG 0.517585 1_1:-18106965 Msa0012020:three_prime_UTR
CATCCTCAGATTTCTTGTTG+AGG 0.517588 1_1:+18107454 None:intergenic
TGTAGTCTCCTTCTATAAGA+AGG 0.520559 1_1:+18107339 None:intergenic
ACTGAATGAGGTGCTGTAAC+CGG 0.521363 1_1:+18109346 None:intergenic
AACATGGTAAGTTGAGGAGC+AGG 0.523147 1_1:+18109174 None:intergenic
TCACCTGAGATTAACAATGA+AGG 0.525032 1_1:-18110793 Msa0012020:CDS
GAAAATAGGGATGTGGTTGA+GGG 0.528130 1_1:-18106958 Msa0012020:three_prime_UTR
AAATTCGCATCAGGTGATGA+TGG 0.528192 1_1:-18108659 Msa0012020:CDS
GAGCAGGGTGGTATGTCTAC+AGG 0.528533 1_1:+18108620 None:intergenic
GCAGAGACTTTGTTCAAGAA+GGG 0.533315 1_1:+18110045 None:intergenic
CATTCAGTTCTTCCGATCGT+TGG 0.534965 1_1:-18109331 Msa0012020:CDS
TCTAGCTCGAAATTCGCATC+AGG 0.536374 1_1:-18108668 Msa0012020:CDS
ATCACTACTTGGTGGATCAC+CGG 0.541418 1_1:-18109365 Msa0012020:CDS
CTAATGCTATACTATACTGT+TGG 0.542337 1_1:+18107127 None:intergenic
CACTAGTACTGCTAATATGC+CGG 0.542872 1_1:-18107391 Msa0012020:CDS
GTAGACATACCACCCTGCTC+TGG 0.550254 1_1:-18108617 Msa0012020:CDS
AAGCAGATGTTGTAGGAGTA+GGG 0.553445 1_1:+18108495 None:intergenic
CACAGTACCGCCATAAAACA+TGG 0.558159 1_1:+18109158 None:intergenic
GCGAAGCAATCACTACTTGG+TGG 0.562781 1_1:-18109373 Msa0012020:CDS
TGTATGTTTGATACATAGGT+AGG 0.563499 1_1:-18107219 Msa0012020:three_prime_UTR
AATGATGCTTTGCGGGCCTG+CGG 0.566874 1_1:+18108263 None:intergenic
CACCTGAGATTAACAATGAA+GGG 0.567172 1_1:-18110792 Msa0012020:CDS
AGTTGAGGAGCAGGTGCAGA+TGG 0.568414 1_1:+18109183 None:intergenic
ACTGGTCCACAGCCAGGGAG+TGG 0.579269 1_1:-18108563 Msa0012020:CDS
ATTAGCAGTACTAGTGGTCG+CGG 0.581937 1_1:+18107398 None:intergenic
CACATACTGGTCCACAGCCA+GGG 0.588678 1_1:-18108568 Msa0012020:CDS
CTTATCTGCAGCTTCAAACA+GGG 0.597255 1_1:-18108711 Msa0012020:CDS
TCAAGCAAATTCACTTTCTG+CGG 0.601727 1_1:-18109455 Msa0012020:CDS
ACTTCCAGCCAACAACATGA+TGG 0.615633 1_1:+18108736 None:intergenic
CGGCATATTAGCAGTACTAG+TGG 0.617445 1_1:+18107392 None:intergenic
AGTAGGATATCTCTGTTAGG+AGG 0.627796 1_1:-18107003 Msa0012020:three_prime_UTR
TAGAACTCTTTCAAACACGA+TGG 0.630111 1_1:-18109577 Msa0012020:CDS
TCTTTCAAACACGATGGACA+AGG 0.634289 1_1:-18109571 Msa0012020:CDS
GGACTTGAAATACCAGAGCA+GGG 0.635730 1_1:+18108605 None:intergenic
CCAGCAACAGTACCAACGAT+CGG 0.636094 1_1:+18109319 None:intergenic
CCATAAAACATGGTAAGTTG+AGG 0.638856 1_1:+18109168 None:intergenic
ATGGCTGCTAAAACATCTAG+AGG 0.639805 1_1:-18108518 Msa0012020:CDS
ACGATCGGAAGAACTGAATG+AGG 0.643920 1_1:+18109334 None:intergenic
CAGGGTGGTATGTCTACAGG+TGG 0.644694 1_1:+18108623 None:intergenic
TTGCTGGTTTGGTTGAACCA+TGG 0.654058 1_1:-18109303 Msa0012020:intron
TAACCTCAACAAGAAATCTG+AGG 0.657118 1_1:-18107457 Msa0012020:CDS
ACTAAAACCACCAAGCAATG+AGG 0.661025 1_1:+18106919 None:intergenic
TTACATACCTGATGGAACCA+TGG 0.681302 1_1:+18108436 None:intergenic
AATATGCCGGTAGCAAACCA+AGG 0.684244 1_1:-18107378 Msa0012020:CDS
AGTAGTCAATGCAACCACCA+TGG 0.687562 1_1:-18108453 Msa0012020:CDS
TTCAAACACGATGGACAAGG+TGG 0.707235 1_1:-18109568 Msa0012020:CDS
CTTGAAATACCAGAGCAGGG+TGG 0.775660 1_1:+18108608 None:intergenic
CATACCTGATGGAACCATGG+TGG 0.816498 1_1:+18108439 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGCTTTTTTTTTTTTTTTT+TGG - chr1_1:18106946-18106965 Msa0012020:three_prime_UTR 10.0%
!! ATACTTATATAGATGTAAAA+AGG - chr1_1:18107135-18107154 Msa0012020:three_prime_UTR 15.0%
!!! TTAATTATACAAGTCTTTTT+AGG - chr1_1:18107937-18107956 Msa0012020:intron 15.0%
!!! ATTCATATGAAATTGATTTT+CGG - chr1_1:18107965-18107984 Msa0012020:intron 15.0%
!!! CCTATATTTATTATAACTTT+TGG + chr1_1:18109333-18109352 None:intergenic 15.0%
!! CCAAAAGTTATAATAAATAT+AGG - chr1_1:18109330-18109349 Msa0012020:CDS 15.0%
!! AATTATAAGATGTATATTCA+TGG - chr1_1:18110020-18110039 Msa0012020:CDS 15.0%
!!! TGTATAAAATTATTTTGGAA+GGG + chr1_1:18110132-18110151 None:intergenic 15.0%
!!! ATGTATAAAATTATTTTGGA+AGG + chr1_1:18110133-18110152 None:intergenic 15.0%
!!! CTAGATGTATAAAATTATTT+TGG + chr1_1:18110137-18110156 None:intergenic 15.0%
!!! TATTTAGTTTTTACAAAAGT+AGG - chr1_1:18110672-18110691 Msa0012020:intron 15.0%
!!! GATTTTATTTCAAGAAAATA+GGG - chr1_1:18110721-18110740 Msa0012020:intron 15.0%
!!! AATTCTTTGAGCTTTAATTT+TGG - chr1_1:18106969-18106988 Msa0012020:three_prime_UTR 20.0%
!! TGCACCAAATTAATTATTAA+AGG - chr1_1:18107218-18107237 Msa0012020:three_prime_UTR 20.0%
!! GCACCAAATTAATTATTAAA+GGG - chr1_1:18107219-18107238 Msa0012020:three_prime_UTR 20.0%
!! ACACCCTTTAATAATTAATT+TGG + chr1_1:18107225-18107244 None:intergenic 20.0%
!! AATGTTAATAATTAGTTGTC+AGG + chr1_1:18107495-18107514 None:intergenic 20.0%
!! TGTTAAAAAATTGTGAAGTT+AGG - chr1_1:18107778-18107797 Msa0012020:intron 20.0%
!! TAAAACAAATTCACATTTAG+AGG - chr1_1:18107848-18107867 Msa0012020:intron 20.0%
!! AAAACAAATTCACATTTAGA+GGG - chr1_1:18107849-18107868 Msa0012020:intron 20.0%
!! AAACATCCTAAAATTATGTT+CGG + chr1_1:18107993-18108012 None:intergenic 20.0%
!!! AAGTTACAAGATGATTTTTT+AGG + chr1_1:18108273-18108292 None:intergenic 20.0%
!!! AAAAATCATCTTGTAACTTT+TGG - chr1_1:18108274-18108293 Msa0012020:intron 20.0%
!! CCTAAAAAATCTTTATAAGT+GGG - chr1_1:18109638-18109657 Msa0012020:intron 20.0%
!! TGAAAAAGTCTTTATAAAGT+GGG - chr1_1:18109946-18109965 Msa0012020:intron 20.0%
!!! ATACATCTTATAATTTGTGT+TGG + chr1_1:18110015-18110034 None:intergenic 20.0%
!!! GTATAAAATTATTTTGGAAG+GGG + chr1_1:18110131-18110150 None:intergenic 20.0%
!!! CAATATTTTAAGTTACATGT+TGG + chr1_1:18110399-18110418 None:intergenic 20.0%
!! AATGTATATATATCTGATCT+TGG + chr1_1:18110650-18110669 None:intergenic 20.0%
!!! GGATTTTATTTCAAGAAAAT+AGG - chr1_1:18110720-18110739 Msa0012020:intron 20.0%
!! TTGAAAAGTAAACTCTTATT+AGG - chr1_1:18110796-18110815 Msa0012020:CDS 20.0%
!!! TGATATTCTAAAGATATTTC+AGG + chr1_1:18110824-18110843 None:intergenic 20.0%
!!! TTTGAGCTTTAATTTTGGTA+TGG - chr1_1:18106974-18106993 Msa0012020:three_prime_UTR 25.0%
!!! TTTAATTTTGGTATGGTTTG+TGG - chr1_1:18106981-18107000 Msa0012020:three_prime_UTR 25.0%
!!! TGATTTTTCTGAAGTTGTTT+TGG - chr1_1:18107047-18107066 Msa0012020:three_prime_UTR 25.0%
!! AATTATTAAAGGGTGTAGTA+TGG - chr1_1:18107229-18107248 Msa0012020:three_prime_UTR 25.0%
!!! TAAATTTGGTTTTAATCCTC+CGG - chr1_1:18107254-18107273 Msa0012020:three_prime_UTR 25.0%
! TTATGTTAATGATTCCTTTG+TGG - chr1_1:18107585-18107604 Msa0012020:intron 25.0%
! AAAAACAGAAATTGAGAGAA+AGG + chr1_1:18107758-18107777 None:intergenic 25.0%
! TAAATGGTAAGAACAAACAA+TGG + chr1_1:18108097-18108116 None:intergenic 25.0%
! AAATCAATCCAAGTAGAATA+GGG + chr1_1:18108613-18108632 None:intergenic 25.0%
! TAAATCAATCCAAGTAGAAT+AGG + chr1_1:18108614-18108633 None:intergenic 25.0%
! TTGTCATAAACTAACTCATT+AGG - chr1_1:18108735-18108754 Msa0012020:CDS 25.0%
!! TTAAGTTGTTTATCCAAACA+AGG - chr1_1:18108832-18108851 Msa0012020:intron 25.0%
!!! AAAGATGATAACTTGTTGTA+TGG + chr1_1:18109528-18109547 None:intergenic 25.0%
! GCCTAAAAAATCTTTATAAG+TGG - chr1_1:18109637-18109656 Msa0012020:intron 25.0%
!!! CCCACTTATAAAGATTTTTT+AGG + chr1_1:18109641-18109660 None:intergenic 25.0%
! CTGAAAAAGTCTTTATAAAG+TGG - chr1_1:18109945-18109964 Msa0012020:intron 25.0%
!!! CATCATACCAATTATTTTAG+AGG + chr1_1:18110081-18110100 None:intergenic 25.0%
! AAATAATTGGTATGATGTGT+TGG - chr1_1:18110084-18110103 Msa0012020:intron 25.0%
! CATATGTATGTTTGATACAT+AGG - chr1_1:18110469-18110488 Msa0012020:intron 25.0%
!!! TTCCCTTAAATAATTTGTTG+TGG - chr1_1:18110499-18110518 Msa0012020:intron 25.0%
!!! TCCCTTAAATAATTTGTTGT+GGG - chr1_1:18110500-18110519 Msa0012020:intron 25.0%
! TGTCAGATTTAGTTACATAA+CGG + chr1_1:18110597-18110616 None:intergenic 25.0%
AATGAAGGGTCAAAAAATTC+AGG - chr1_1:18106914-18106933 Msa0012020:three_prime_UTR 30.0%
ATATAAGTATCTGTGTTGTG+AGG + chr1_1:18107125-18107144 None:intergenic 30.0%
TATTACTACACCCTTCAATA+TGG + chr1_1:18107197-18107216 None:intergenic 30.0%
GGTGTAGTATGGTTTAAATT+TGG - chr1_1:18107240-18107259 Msa0012020:three_prime_UTR 30.0%
! TTTTAATCCTCCGGTTTATA+AGG - chr1_1:18107263-18107282 Msa0012020:three_prime_UTR 30.0%
TTGGTAAATTACAGTTTGGT+CGG - chr1_1:18107295-18107314 Msa0012020:three_prime_UTR 30.0%
ATTAAGAACTTGAGTTCGTT+GGG - chr1_1:18107384-18107403 Msa0012020:CDS 30.0%
TCGTCTTCAGAAACTTTAAA+AGG + chr1_1:18107689-18107708 None:intergenic 30.0%
! TAAAGTTTCTGAAGACGATA+AGG - chr1_1:18107691-18107710 Msa0012020:intron 30.0%
AAGGCTAAAATGATATCTTC+TGG - chr1_1:18107710-18107729 Msa0012020:intron 30.0%
!! GTGTTTGAAAGAGTTCTAAA+TGG + chr1_1:18108113-18108132 None:intergenic 30.0%
AAATTCACATTGTGTTGTAC+AGG + chr1_1:18108175-18108194 None:intergenic 30.0%
! AGAAAGTGAATTTGCTTGAT+TGG + chr1_1:18108236-18108255 None:intergenic 30.0%
!!! ACAAGATGATTTTTTAGGAG+CGG + chr1_1:18108268-18108287 None:intergenic 30.0%
ATATATTCCCCTATTCTACT+TGG - chr1_1:18108602-18108621 Msa0012020:CDS 30.0%
AATCAATCCAAGTAGAATAG+GGG + chr1_1:18108612-18108631 None:intergenic 30.0%
AATAACCTGAAAACAGCTTA+TGG + chr1_1:18108717-18108736 None:intergenic 30.0%
GTATGACTTCCTTTATACTT+GGG + chr1_1:18108858-18108877 None:intergenic 30.0%
TGTATGACTTCCTTTATACT+TGG + chr1_1:18108859-18108878 None:intergenic 30.0%
!! TTTTGACTGAAGTTAAGCAT+AGG - chr1_1:18108907-18108926 Msa0012020:intron 30.0%
AGGTTTGATCAATTGTATTC+AGG - chr1_1:18108927-18108946 Msa0012020:intron 30.0%
GTATGTGAAGAAACAGATAA+AGG + chr1_1:18109111-18109130 None:intergenic 30.0%
! TTATCTGTTTCTTCACATAC+TGG - chr1_1:18109111-18109130 Msa0012020:intron 30.0%
TTATACTGTTACATACCTGA+TGG + chr1_1:18109267-18109286 None:intergenic 30.0%
GAATAACTCCATACTACAAA+AGG + chr1_1:18109362-18109381 None:intergenic 30.0%
GAAAGGTTAGATCTAATACA+CGG - chr1_1:18109477-18109496 Msa0012020:CDS 30.0%
AAAGGTTAGATCTAATACAC+GGG - chr1_1:18109478-18109497 Msa0012020:CDS 30.0%
!! GATAACTTGTTGTATGGAAA+AGG + chr1_1:18109522-18109541 None:intergenic 30.0%
GACCATCTTATAATTTGAAG+TGG + chr1_1:18109709-18109728 None:intergenic 30.0%
! ACCTATAGAGACTTTTGAAT+GGG + chr1_1:18109738-18109757 None:intergenic 30.0%
ATTCAAAAGTCTCTATAGGT+GGG - chr1_1:18109738-18109757 Msa0012020:intron 30.0%
GGTCAACACAAATTATAAGA+TGG - chr1_1:18109804-18109823 Msa0012020:intron 30.0%
GTCTATATGACATCTGATTT+GGG + chr1_1:18109926-18109945 None:intergenic 30.0%
AGTCTATATGACATCTGATT+TGG + chr1_1:18109927-18109946 None:intergenic 30.0%
!! TCGTTTGCCTCTAAAATAAT+TGG - chr1_1:18110071-18110090 Msa0012020:CDS 30.0%
! TTATGTGTTTCTGTCAATAC+AGG - chr1_1:18110192-18110211 Msa0012020:intron 30.0%
! TATGTGTTTCTGTCAATACA+GGG - chr1_1:18110193-18110212 Msa0012020:intron 30.0%
GATTTCTTGTTGAGGTTATA+TGG + chr1_1:18110233-18110252 None:intergenic 30.0%
ATGTTAGCACCTATTGAATT+CGG + chr1_1:18110272-18110291 None:intergenic 30.0%
!! CTCAGCATAAGTTTTAATCA+CGG + chr1_1:18110446-18110465 None:intergenic 30.0%
TGTATGTTTGATACATAGGT+AGG - chr1_1:18110473-18110492 Msa0012020:intron 30.0%
CCCCACAACAAATTATTTAA+GGG + chr1_1:18110504-18110523 None:intergenic 30.0%
!! CCCTTAAATAATTTGTTGTG+GGG - chr1_1:18110501-18110520 Msa0012020:intron 30.0%
!! CCTTAAATAATTTGTTGTGG+GGG - chr1_1:18110502-18110521 Msa0012020:intron 30.0%
!! CTTAAATAATTTGTTGTGGG+GGG - chr1_1:18110503-18110522 Msa0012020:intron 30.0%
CTTACCTTATATTAAGTGGT+TGG - chr1_1:18110527-18110546 Msa0012020:intron 30.0%
GAATCCAACCACTTAATATA+AGG + chr1_1:18110534-18110553 None:intergenic 30.0%
CTAATGCTATACTATACTGT+TGG + chr1_1:18110568-18110587 None:intergenic 30.0%
AAAAGTAGGATATCTCTGTT+AGG - chr1_1:18110686-18110705 Msa0012020:intron 30.0%
ATTTCAAGAAAATAGGGATG+TGG - chr1_1:18110727-18110746 Msa0012020:intron 30.0%
TCACCTGAGATTAACAATGA+AGG - chr1_1:18106899-18106918 Msa0012020:three_prime_UTR 35.0%
CACCTGAGATTAACAATGAA+GGG - chr1_1:18106900-18106919 Msa0012020:three_prime_UTR 35.0%
TGTTTCCTTGTCCATATTGA+AGG - chr1_1:18107183-18107202 Msa0012020:three_prime_UTR 35.0%
GTTTCCTTGTCCATATTGAA+GGG - chr1_1:18107184-18107203 Msa0012020:three_prime_UTR 35.0%
AGCCTTGGTAAATTACAGTT+TGG - chr1_1:18107291-18107310 Msa0012020:three_prime_UTR 35.0%
GACCAAACTGTAATTTACCA+AGG + chr1_1:18107296-18107315 None:intergenic 35.0%
TAAATTACAGTTTGGTCGGA+AGG - chr1_1:18107299-18107318 Msa0012020:three_prime_UTR 35.0%
TTTGGTCGGAAGGTAAATAA+AGG - chr1_1:18107309-18107328 Msa0012020:three_prime_UTR 35.0%
CTCAAGTTCTTAATGAGCTT+CGG + chr1_1:18107378-18107397 None:intergenic 35.0%
CATTAAGAACTTGAGTTCGT+TGG - chr1_1:18107383-18107402 Msa0012020:CDS 35.0%
TTAAGAACTTGAGTTCGTTG+GGG - chr1_1:18107385-18107404 Msa0012020:CDS 35.0%
CGAATGTTTCAGCAGTAAAA+TGG - chr1_1:18107624-18107643 Msa0012020:intron 35.0%
!! GATATCTTCTGGTTTCATAC+AGG - chr1_1:18107721-18107740 Msa0012020:intron 35.0%
AGGACAACATTCTGTTTATC+AGG - chr1_1:18107798-18107817 Msa0012020:intron 35.0%
! TTTTCAGTGCAATCTGCTTA+CGG - chr1_1:18107908-18107927 Msa0012020:intron 35.0%
! TCGGATCCGAACATAATTTT+AGG - chr1_1:18107984-18108003 Msa0012020:intron 35.0%
AACAAACAATGGAAGGAAGT+GGG + chr1_1:18108086-18108105 None:intergenic 35.0%
TGGTAAGAACAAACAATGGA+AGG + chr1_1:18108093-18108112 None:intergenic 35.0%
TAGAACTCTTTCAAACACGA+TGG - chr1_1:18108115-18108134 Msa0012020:intron 35.0%
! GAATTTGCTTGATTGGAAAC+TGG + chr1_1:18108229-18108248 None:intergenic 35.0%
TCAAGCAAATTCACTTTCTG+CGG - chr1_1:18108237-18108256 Msa0012020:CDS 35.0%
GCATTGAACTGAAATTACCA+TGG + chr1_1:18108409-18108428 None:intergenic 35.0%
CAATGCTAGAGATGTTTCTT+AGG - chr1_1:18108423-18108442 Msa0012020:intron 35.0%
! GAGATGTTTCTTAGGAGTTT+TGG - chr1_1:18108431-18108450 Msa0012020:intron 35.0%
CCATAAAACATGGTAAGTTG+AGG + chr1_1:18108527-18108546 None:intergenic 35.0%
! CCTCAACTTACCATGTTTTA+TGG - chr1_1:18108524-18108543 Msa0012020:CDS 35.0%
! CAACTTACCATGTTTTATGG+CGG - chr1_1:18108527-18108546 Msa0012020:CDS 35.0%
TGAGAGAAAAATACCTTCTC+AGG + chr1_1:18108581-18108600 None:intergenic 35.0%
!! AATGAGAGTATCAGACTGTT+TGG - chr1_1:18108662-18108681 Msa0012020:CDS 35.0%
AAGTAGCAGTGATGAGTTTA+TGG - chr1_1:18109155-18109174 Msa0012020:intron 35.0%
CTAGTTCAACCTTACAAAAC+CGG + chr1_1:18109685-18109704 None:intergenic 35.0%
GGCCACTTCAAATTATAAGA+TGG - chr1_1:18109704-18109723 Msa0012020:intron 35.0%
! CACCTATAGAGACTTTTGAA+TGG + chr1_1:18109739-18109758 None:intergenic 35.0%
CATTCAAAAGTCTCTATAGG+TGG - chr1_1:18109737-18109756 Msa0012020:intron 35.0%
AGTGCCTATCCAAAATTTGT+TGG - chr1_1:18109835-18109854 Msa0012020:intron 35.0%
! GTGCCTATCCAAAATTTGTT+GGG - chr1_1:18109836-18109855 Msa0012020:intron 35.0%
CTAGAGTGTGATCCAATAAA+GGG + chr1_1:18109865-18109884 None:intergenic 35.0%
! TCTAGAGTGTGATCCAATAA+AGG + chr1_1:18109866-18109885 None:intergenic 35.0%
AATTGGTATGATGTGTTGGA+AGG - chr1_1:18110088-18110107 Msa0012020:intron 35.0%
TAACCTCAACAAGAAATCTG+AGG - chr1_1:18110235-18110254 Msa0012020:intron 35.0%
GAGTAACTCCTTCTTATAGA+AGG - chr1_1:18110345-18110364 Msa0012020:intron 35.0%
TGTAGTCTCCTTCTATAAGA+AGG + chr1_1:18110356-18110375 None:intergenic 35.0%
TAGAAGGAGACTACATAAGA+TGG - chr1_1:18110361-18110380 Msa0012020:intron 35.0%
CCCCCACAACAAATTATTTA+AGG + chr1_1:18110505-18110524 None:intergenic 35.0%
GGGTCTTACCTTATATTAAG+TGG - chr1_1:18110523-18110542 Msa0012020:intron 35.0%
CTCTGTTAGGAGGATATATT+TGG - chr1_1:18110699-18110718 Msa0012020:intron 35.0%
TTGAAACTTACCTCATTGCT+TGG - chr1_1:18110763-18110782 Msa0012020:intron 35.0%
GACCCTTCATTGTTAATCTC+AGG + chr1_1:18106905-18106924 None:intergenic 40.0%
TACACCCTTCAATATGGACA+AGG + chr1_1:18107191-18107210 None:intergenic 40.0%
ATCCTCCGGTTTATAAGGAA+AGG - chr1_1:18107268-18107287 Msa0012020:three_prime_UTR 40.0%
AGGCTCCTTTCCTTATAAAC+CGG + chr1_1:18107276-18107295 None:intergenic 40.0%
GTTTATAAGGAAAGGAGCCT+TGG - chr1_1:18107276-18107295 Msa0012020:three_prime_UTR 40.0%
CGGAAGGTAAATAAAGGACT+CGG - chr1_1:18107315-18107334 Msa0012020:three_prime_UTR 40.0%
GGAAGGTAAATAAAGGACTC+GGG - chr1_1:18107316-18107335 Msa0012020:three_prime_UTR 40.0%
TAAGAACTTGAGTTCGTTGG+GGG - chr1_1:18107386-18107405 Msa0012020:CDS 40.0%
!! ATTGGTTTGGCTAAGGGTTA+AGG - chr1_1:18107422-18107441 Msa0012020:CDS 40.0%
GTTAAGGAGTAAGAGGACTT+GGG - chr1_1:18107438-18107457 Msa0012020:CDS 40.0%
ATTCCTTTGTGGCTATGTGT+AGG - chr1_1:18107596-18107615 Msa0012020:intron 40.0%
AAACCTACACATAGCCACAA+AGG + chr1_1:18107602-18107621 None:intergenic 40.0%
GCAGAGACTTTGTTCAAGAA+GGG + chr1_1:18107650-18107669 None:intergenic 40.0%
AGCAGAGACTTTGTTCAAGA+AGG + chr1_1:18107651-18107670 None:intergenic 40.0%
ATTCACATTTAGAGGGTCGT+TGG - chr1_1:18107856-18107875 Msa0012020:intron 40.0%
GAACAAACAATGGAAGGAAG+TGG + chr1_1:18108087-18108106 None:intergenic 40.0%
TCTTTCAAACACGATGGACA+AGG - chr1_1:18108121-18108140 Msa0012020:intron 40.0%
AATGCGAAGCAATCACTACT+TGG - chr1_1:18108316-18108335 Msa0012020:intron 40.0%
CAATGATATCACTCCTGAGA+AGG - chr1_1:18108565-18108584 Msa0012020:CDS 40.0%
TTTGGAGAGCTTATCGAATC+AGG - chr1_1:18108680-18108699 Msa0012020:CDS 40.0%
!! CATGTCCATAAGCTGTTTTC+AGG - chr1_1:18108709-18108728 Msa0012020:CDS 40.0%
!! CTTTATACTTGGGCCTTGTT+TGG + chr1_1:18108848-18108867 None:intergenic 40.0%
CAAACAAGGCCCAAGTATAA+AGG - chr1_1:18108846-18108865 Msa0012020:intron 40.0%
CTTATCTGCAGCTTCAAACA+GGG - chr1_1:18108981-18109000 Msa0012020:intron 40.0%
AAATTCGCATCAGGTGATGA+TGG - chr1_1:18109033-18109052 Msa0012020:intron 40.0%
! ATGTCTACAGGTGGACTTAT+AGG + chr1_1:18109063-18109082 None:intergenic 40.0%
ATGGCTGCTAAAACATCTAG+AGG - chr1_1:18109174-18109193 Msa0012020:CDS 40.0%
AAGCAGATGTTGTAGGAGTA+GGG + chr1_1:18109200-18109219 None:intergenic 40.0%
ACTTTGCAAGCAGATGTTGT+AGG + chr1_1:18109207-18109226 None:intergenic 40.0%
!! GTGGTTGCATTGACTACTTT+GGG + chr1_1:18109237-18109256 None:intergenic 40.0%
TTACATACCTGATGGAACCA+TGG + chr1_1:18109259-18109278 None:intergenic 40.0%
! GGATGCATCCTTTTGTAGTA+TGG - chr1_1:18109351-18109370 Msa0012020:CDS 40.0%
! ATTTTATGCAGCTATACCGC+AGG - chr1_1:18109413-18109432 Msa0012020:CDS 40.0%
!!! AGCATCATTGGCTCGATTTT+TGG - chr1_1:18109443-18109462 Msa0012020:CDS 40.0%
ATATCACTCACCTTACAAGC+CGG - chr1_1:18109663-18109682 Msa0012020:intron 40.0%
!! CGGTTTTGTAAGGTTGAACT+AGG - chr1_1:18109683-18109702 Msa0012020:intron 40.0%
GCCCATTCAAAAGTCTCTAT+AGG - chr1_1:18109734-18109753 Msa0012020:intron 40.0%
GCATACATCACCTTACAAGT+CGG - chr1_1:18109763-18109782 Msa0012020:intron 40.0%
! TCGCCCAACAAATTTTGGAT+AGG + chr1_1:18109842-18109861 None:intergenic 40.0%
CACTCTAGATGTCAAGTTCA+TGG - chr1_1:18109877-18109896 Msa0012020:intron 40.0%
!! ACCTAACAAGCCAGTTTTGT+GGG - chr1_1:18109977-18109996 Msa0012020:CDS 40.0%
!! AGTTTTGTGGGGTTGAGTTT+GGG - chr1_1:18109989-18110008 Msa0012020:CDS 40.0%
TATGATGTGTTGGAAGGAAG+AGG - chr1_1:18110094-18110113 Msa0012020:intron 40.0%
CATCCTCAGATTTCTTGTTG+AGG + chr1_1:18110241-18110260 None:intergenic 40.0%
GCACAAATGCCGAATTCAAT+AGG - chr1_1:18110260-18110279 Msa0012020:intron 40.0%
CACTAGTACTGCTAATATGC+CGG - chr1_1:18110301-18110320 Msa0012020:intron 40.0%
!! TGTTATCCTTGGTTTGCTAC+CGG + chr1_1:18110323-18110342 None:intergenic 40.0%
GAGTTACTCACTGTTATCCT+TGG + chr1_1:18110334-18110353 None:intergenic 40.0%
AGTAGGATATCTCTGTTAGG+AGG - chr1_1:18110689-18110708 Msa0012020:intron 40.0%
AGAAAATAGGGATGTGGTTG+AGG - chr1_1:18110733-18110752 Msa0012020:intron 40.0%
GAAAATAGGGATGTGGTTGA+GGG - chr1_1:18110734-18110753 Msa0012020:intron 40.0%
AAACTTACCTCATTGCTTGG+TGG - chr1_1:18110766-18110785 Msa0012020:intron 40.0%
ACTAAAACCACCAAGCAATG+AGG + chr1_1:18110776-18110795 None:intergenic 40.0%
CTCCTTTCCTTATAAACCGG+AGG + chr1_1:18107273-18107292 None:intergenic 45.0%
AAGGACTCGGGTTCGAAATT+AGG - chr1_1:18107328-18107347 Msa0012020:three_prime_UTR 45.0%
CGGTTAAGCTCGAATTGATC+AGG + chr1_1:18107358-18107377 None:intergenic 45.0%
AAGAACTTGAGTTCGTTGGG+GGG - chr1_1:18107387-18107406 Msa0012020:CDS 45.0%
! GTTGAGTAGCTCGATTGGTT+TGG - chr1_1:18107409-18107428 Msa0012020:CDS 45.0%
!! TAGCTCGATTGGTTTGGCTA+AGG - chr1_1:18107415-18107434 Msa0012020:CDS 45.0%
!! AGCTCGATTGGTTTGGCTAA+GGG - chr1_1:18107416-18107435 Msa0012020:CDS 45.0%
GCTAAGGGTTAAGGAGTAAG+AGG - chr1_1:18107431-18107450 Msa0012020:CDS 45.0%
GGTTAAGGAGTAAGAGGACT+TGG - chr1_1:18107437-18107456 Msa0012020:CDS 45.0%
! AGCATTTTTCTCGTTCACCG+TGG + chr1_1:18107470-18107489 None:intergenic 45.0%
TTCAAACACGATGGACAAGG+TGG - chr1_1:18108124-18108143 Msa0012020:intron 45.0%
! ATCACTACTTGGTGGATCAC+CGG - chr1_1:18108327-18108346 Msa0012020:intron 45.0%
!! ACTGAATGAGGTGCTGTAAC+CGG + chr1_1:18108349-18108368 None:intergenic 45.0%
ACGATCGGAAGAACTGAATG+AGG + chr1_1:18108361-18108380 None:intergenic 45.0%
CATTCAGTTCTTCCGATCGT+TGG - chr1_1:18108361-18108380 Msa0012020:intron 45.0%
!! TTGCTGGTTTGGTTGAACCA+TGG - chr1_1:18108389-18108408 Msa0012020:intron 45.0%
! AACATGGTAAGTTGAGGAGC+AGG + chr1_1:18108521-18108540 None:intergenic 45.0%
CACAGTACCGCCATAAAACA+TGG + chr1_1:18108537-18108556 None:intergenic 45.0%
ACTTCCAGCCAACAACATGA+TGG + chr1_1:18108959-18108978 None:intergenic 45.0%
! ATCATGTTGTTGGCTGGAAG+TGG - chr1_1:18108958-18108977 Msa0012020:intron 45.0%
GCTTATCTGCAGCTTCAAAC+AGG - chr1_1:18108980-18108999 Msa0012020:intron 45.0%
! TCTAGCTCGAAATTCGCATC+AGG - chr1_1:18109024-18109043 Msa0012020:intron 45.0%
GGACTTGAAATACCAGAGCA+GGG + chr1_1:18109090-18109109 None:intergenic 45.0%
AGGACTTGAAATACCAGAGC+AGG + chr1_1:18109091-18109110 None:intergenic 45.0%
CAAGCAGATGTTGTAGGAGT+AGG + chr1_1:18109201-18109220 None:intergenic 45.0%
!! GGTGGTTGCATTGACTACTT+TGG + chr1_1:18109238-18109257 None:intergenic 45.0%
AGTAGTCAATGCAACCACCA+TGG - chr1_1:18109239-18109258 Msa0012020:intron 45.0%
ATCGAGCCAATGATGCTTTG+CGG + chr1_1:18109440-18109459 None:intergenic 45.0%
!! TCGATTTTTGGAGAAGCGCA+AGG - chr1_1:18109455-18109474 Msa0012020:CDS 45.0%
!! TTTTGGAGAAGCGCAAGGAA+AGG - chr1_1:18109460-18109479 Msa0012020:CDS 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr1_1:18109676-18109695 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr1_1:18109673-18109692 Msa0012020:intron 45.0%
CAAAAGTCTCTATAGGTGGG+AGG - chr1_1:18109741-18109760 Msa0012020:intron 45.0%
! ACCTTACAAGTCGGCTTTGT+AGG - chr1_1:18109772-18109791 Msa0012020:intron 45.0%
! CCTTACAAGTCGGCTTTGTA+GGG - chr1_1:18109773-18109792 Msa0012020:intron 45.0%
! AAGGGTCGCCCAACAAATTT+TGG + chr1_1:18109847-18109866 None:intergenic 45.0%
TTTGTTGGGCGACCCTTTAT+TGG - chr1_1:18109850-18109869 Msa0012020:intron 45.0%
TCAAGTTCATGGTGTGACGA+GGG - chr1_1:18109888-18109907 Msa0012020:intron 45.0%
! CACCTAACAAGCCAGTTTTG+TGG - chr1_1:18109976-18109995 Msa0012020:CDS 45.0%
!! CCTAACAAGCCAGTTTTGTG+GGG - chr1_1:18109978-18109997 Msa0012020:CDS 45.0%
CAAACTCAACCCCACAAAAC+TGG + chr1_1:18109990-18110009 None:intergenic 45.0%
!! CAGTTTTGTGGGGTTGAGTT+TGG - chr1_1:18109988-18110007 Msa0012020:CDS 45.0%
ATTAGCAGTACTAGTGGTCG+CGG + chr1_1:18110297-18110316 None:intergenic 45.0%
CGGCATATTAGCAGTACTAG+TGG + chr1_1:18110303-18110322 None:intergenic 45.0%
AATATGCCGGTAGCAAACCA+AGG - chr1_1:18110314-18110333 Msa0012020:intron 45.0%
GCGAAGCAATCACTACTTGG+TGG - chr1_1:18108319-18108338 Msa0012020:intron 50.0%
CCAGCAACAGTACCAACGAT+CGG + chr1_1:18108376-18108395 None:intergenic 50.0%
! CGTTGGTACTGTTGCTGGTT+TGG - chr1_1:18108378-18108397 Msa0012020:intron 50.0%
GGCACAAGCCATCATGTTGT+TGG - chr1_1:18108948-18108967 Msa0012020:intron 50.0%
CAAGCCATCATGTTGTTGGC+TGG - chr1_1:18108952-18108971 Msa0012020:intron 50.0%
GAGCTAGATGCCTGAACTTC+AGG + chr1_1:18109012-18109031 None:intergenic 50.0%
CTTGAAATACCAGAGCAGGG+TGG + chr1_1:18109087-18109106 None:intergenic 50.0%
CATACCTGATGGAACCATGG+TGG + chr1_1:18109256-18109275 None:intergenic 50.0%
TCGAGCCAATGATGCTTTGC+GGG + chr1_1:18109439-18109458 None:intergenic 50.0%
!! CCCTACAAAGCCGACTTGTA+AGG + chr1_1:18109776-18109795 None:intergenic 50.0%
! CGGCTTTGTAGGGTTGAGTT+AGG - chr1_1:18109783-18109802 Msa0012020:intron 50.0%
GTCAAGTTCATGGTGTGACG+AGG - chr1_1:18109887-18109906 Msa0012020:intron 50.0%
!! CCCCACAAAACTGGCTTGTT+AGG + chr1_1:18109981-18110000 None:intergenic 50.0%
GAGGACTTGGGCTCAAACCA+CGG - chr1_1:18107450-18107469 Msa0012020:CDS 55.0%
CCGATCGTTGGTACTGTTGC+TGG - chr1_1:18108373-18108392 Msa0012020:intron 55.0%
AGTTGAGGAGCAGGTGCAGA+TGG + chr1_1:18108512-18108531 None:intergenic 55.0%
CAGGGCTCAACCTGAAGTTC+AGG - chr1_1:18108999-18109018 Msa0012020:intron 55.0%
CAGGGTGGTATGTCTACAGG+TGG + chr1_1:18109072-18109091 None:intergenic 55.0%
GAGCAGGGTGGTATGTCTAC+AGG + chr1_1:18109075-18109094 None:intergenic 55.0%
GTAGACATACCACCCTGCTC+TGG - chr1_1:18109075-18109094 Msa0012020:intron 55.0%
TCACATACTGGTCCACAGCC+AGG - chr1_1:18109123-18109142 Msa0012020:intron 55.0%
CACATACTGGTCCACAGCCA+GGG - chr1_1:18109124-18109143 Msa0012020:intron 55.0%
GCAACCACCATGGTTCCATC+AGG - chr1_1:18109249-18109268 Msa0012020:intron 55.0%
AATGATGCTTTGCGGGCCTG+CGG + chr1_1:18109432-18109451 None:intergenic 55.0%
GGGGGGTTGAGTAGCTCGAT+TGG - chr1_1:18107404-18107423 Msa0012020:CDS 60.0%
GGACTCGAGCGTGAGCAGAT+AGG - chr1_1:18107877-18107896 Msa0012020:intron 60.0%
! CTGCTACTTGAGCCACTCCC+TGG + chr1_1:18109144-18109163 None:intergenic 60.0%
! GCAGGCCCGCAAAGCATCAT+TGG - chr1_1:18109431-18109450 Msa0012020:CDS 60.0%
ACTGGTCCACAGCCAGGGAG+TGG - chr1_1:18109129-18109148 Msa0012020:intron 65.0%
CTTGAGCCACTCCCTGGCTG+TGG + chr1_1:18109138-18109157 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 18106860 18110854 18106860 ID=Msa0012020;Name=Msa0012020
chr1_1 mRNA 18106860 18110854 18106860 ID=Msa0012020-mRNA-1;Parent=Msa0012020;Name=Msa0012020-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.57|0.62|0.87|0.71|0.75|8|514|354
chr1_1 exon 18106860 18107500 18106860 ID=Msa0012020-mRNA-1:exon:6631;Parent=Msa0012020-mRNA-1
chr1_1 exon 18108233 18108290 18108233 ID=Msa0012020-mRNA-1:exon:6630;Parent=Msa0012020-mRNA-1
chr1_1 exon 18108444 18108765 18108444 ID=Msa0012020-mRNA-1:exon:6629;Parent=Msa0012020-mRNA-1
chr1_1 exon 18109161 18109212 18109161 ID=Msa0012020-mRNA-1:exon:6628;Parent=Msa0012020-mRNA-1
chr1_1 exon 18109304 18109596 18109304 ID=Msa0012020-mRNA-1:exon:6627;Parent=Msa0012020-mRNA-1
chr1_1 exon 18109972 18110096 18109972 ID=Msa0012020-mRNA-1:exon:6626;Parent=Msa0012020-mRNA-1
chr1_1 exon 18110646 18110653 18110646 ID=Msa0012020-mRNA-1:exon:6625;Parent=Msa0012020-mRNA-1
chr1_1 exon 18110775 18110854 18110775 ID=Msa0012020-mRNA-1:exon:6624;Parent=Msa0012020-mRNA-1
chr1_1 CDS 18110775 18110854 18110775 ID=Msa0012020-mRNA-1:cds;Parent=Msa0012020-mRNA-1
chr1_1 CDS 18110646 18110653 18110646 ID=Msa0012020-mRNA-1:cds;Parent=Msa0012020-mRNA-1
chr1_1 CDS 18109972 18110096 18109972 ID=Msa0012020-mRNA-1:cds;Parent=Msa0012020-mRNA-1
chr1_1 CDS 18109304 18109596 18109304 ID=Msa0012020-mRNA-1:cds;Parent=Msa0012020-mRNA-1
chr1_1 CDS 18109161 18109212 18109161 ID=Msa0012020-mRNA-1:cds;Parent=Msa0012020-mRNA-1
chr1_1 CDS 18108444 18108765 18108444 ID=Msa0012020-mRNA-1:cds;Parent=Msa0012020-mRNA-1
chr1_1 CDS 18108233 18108290 18108233 ID=Msa0012020-mRNA-1:cds;Parent=Msa0012020-mRNA-1
chr1_1 CDS 18107374 18107500 18107374 ID=Msa0012020-mRNA-1:cds;Parent=Msa0012020-mRNA-1
chr1_1 three_prime_UTR 18106860 18107373 18106860 ID=Msa0012020-mRNA-1:three_prime_utr;Parent=Msa0012020-mRNA-1
Gene Sequence

>Msa0012020

ATGGAAAGAGATTTCTTGAGTCTTTGCTCAAAAGAATCATCACCTGAGATTAACAATGAAGGGTCAAAAAATTCAGGCATTTGTTTTGGTTTTACGAATGTTTCAGCAGTAAAATGGCCCTTCTTGAACAAAGTCTCTGCTCATTCATATTTGACGCCTTTTAAAGTTTCTGAAGACGATAAGGCTAAAATGATATCTTCTGGTTTCATACAGAACTCTTTCAAACACGATGGACAAGGTGGTATTCATTTTTCTGTGAATCAGTATCCTGTACAACACAATGTGAATTTTATGAATCGTCATCATGATGTGAAGATGTTTCCAGTTTCCAATCAAGCAAATTCACTTTCTGCGGTACATCCGCTCCTAAAAAATCATCTTGTAACTTTTGGTCAGAATATGAACGTTGCTAATGCGAAGCAATCACTACTTGGTGGATCACCGGTTACAGCACCTCATTCAGTTCTTCCGATCGTTGGTACTGTTGCTGGTTTGGTTGAACCATGTGAGATACCATCTGCACCTGCTCCTCAACTTACCATGTTTTATGGCGGTACTGCACAAGCCATCATGTTGTTGGCTGGAAGTGGCTTATCTGCAGCTTCAAACAGGGCTCAACCTGAAGTTCAGGCATCTAGCTCGAAATTCGCATCAGGTGATGATGGTTTGCCTATAAGTCCACCTGTAGACATACCACCCTGCTCTGGTATTTCAAGTCCTTTATCTGTTTCTTCACATACTGGTCCACAGCCAGGGAGTGGCTCAAGTAGCAGTGATGAGTTTATGGCTGCTAAAACATCTAGAGGCCCTACTCCTACAACATCTGCTTGCAAAGTTGTGACTCCCAAAGTAGTCAATGCAACCACCATGGTTCCATCAGCTATACCGCAGGCCCGCAAAGCATCATTGGCTCGATTTTTGGAGAAGCGCAAGGAAAGGGTGATGAGTACAGCACCATATAACCTCAACAAGAAATCTGAGGATGCACAAATGCCGAATTCAATAGGTGCTAACATCTCCGCGACCACTAGTACTGCTAATATGCCGGTAGCAAACCAAGGATAA
Protein sequence

>Msa0012020

MERDFLSLCSKESSPEINNEGSKNSGICFGFTNVSAVKWPFLNKVSAHSYLTPFKVSEDDKAKMISSGFIQNSFKHDGQGGIHFSVNQYPVQHNVNFMNRHHDVKMFPVSNQANSLSAVHPLLKNHLVTFGQNMNVANAKQSLLGGSPVTAPHSVLPIVGTVAGLVEPCEIPSAPAPQLTMFYGGTAQAIMLLAGSGLSAASNRAQPEVQASSSKFASGDDGLPISPPVDIPPCSGISSPLSVSSHTGPQPGSGSSSSDEFMAAKTSRGPTPTTSACKVVTPKVVNATTMVPSAIPQARKASLARFLEKRKERVMSTAPYNLNKKSEDAQMPNSIGANISATTSTANMPVANQG*