Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0154730 | XP_013468658.1 | 98.551 | 759 | 11 | 0 | 1 | 759 | 1 | 759 | 0.0 | 1541 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0154730 | sp|Q0WPQ2|ETR2_ARATH | 59.847 | 782 | 278 | 13 | 1 | 758 | 1 | 770 | 0.0 | 884 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0154730 | A0A072VX71 | 98.551 | 759 | 11 | 0 | 1 | 759 | 1 | 759 | 0.0 | 1541 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0154730 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012020 | Msa0154730 | -0.803125 | 4.046091e-49 | -8.615850e-47 |
| Msa0021400 | Msa0154730 | 0.862136 | 6.273639e-64 | -8.615850e-47 |
| Msa0024950 | Msa0154730 | 0.807476 | 4.962537e-50 | -8.615850e-47 |
| Msa0029700 | Msa0154730 | 0.990254 | 9.019699e-182 | -8.615850e-47 |
| Msa0064960 | Msa0154730 | 0.888793 | 4.306634e-73 | -8.615850e-47 |
| Msa0072440 | Msa0154730 | 0.846883 | 1.641872e-59 | -8.615850e-47 |
| Msa0080020 | Msa0154730 | 0.992859 | 6.821880e-196 | -8.615850e-47 |
| Msa0110240 | Msa0154730 | 0.905880 | 2.688216e-80 | -8.615850e-47 |
| Msa0120860 | Msa0154730 | 0.860422 | 2.088764e-63 | -8.615850e-47 |
| Msa0124960 | Msa0154730 | 0.996778 | 4.218342e-232 | -8.615850e-47 |
| Msa0132080 | Msa0154730 | -0.801384 | 9.237799e-49 | -8.615850e-47 |
| Msa0150330 | Msa0154730 | 0.802735 | 4.872060e-49 | -8.615850e-47 |
| Msa0154730 | Msa0156530 | 0.878223 | 3.340549e-69 | -8.615850e-47 |
| Msa0154730 | Msa0186200 | 0.807178 | 5.738016e-50 | -8.615850e-47 |
| Msa0154730 | Msa0189150 | -0.800639 | 1.311280e-48 | -8.615850e-47 |
| Msa0154730 | Msa0191260 | 0.821969 | 3.043357e-53 | -8.615850e-47 |
| Msa0154730 | Msa0197170 | 0.817494 | 3.202891e-52 | -8.615850e-47 |
| Msa0154730 | Msa0220160 | 0.812369 | 4.390162e-51 | -8.615850e-47 |
| Msa0154730 | Msa0220170 | 0.811126 | 8.181678e-51 | -8.615850e-47 |
| Msa0154730 | Msa0225070 | -0.810037 | 1.406345e-50 | -8.615850e-47 |
| Msa0154730 | Msa0227790 | 0.808188 | 3.501006e-50 | -8.615850e-47 |
| Msa0154730 | Msa0238140 | 0.840971 | 6.302791e-58 | -8.615850e-47 |
| Msa0154730 | Msa0238950 | 0.825783 | 3.883928e-54 | -8.615850e-47 |
| Msa0154730 | Msa0266140 | -0.804649 | 1.951610e-49 | -8.615850e-47 |
| Msa0154730 | Msa0270730 | -0.808133 | 3.597107e-50 | -8.615850e-47 |
| Msa0154730 | Msa0304060 | -0.812928 | 3.312353e-51 | -8.615850e-47 |
| Msa0154730 | Msa0308750 | 0.837488 | 5.045925e-57 | -8.615850e-47 |
| Msa0154730 | Msa0311130 | -0.802220 | 6.222464e-49 | -8.615850e-47 |
| Msa0154730 | Msa0311900 | 0.816138 | 6.454020e-52 | -8.615850e-47 |
| Msa0154730 | Msa0316140 | 0.814200 | 1.739067e-51 | -8.615850e-47 |
| Msa0154730 | Msa0316740 | 0.838387 | 2.964797e-57 | -8.615850e-47 |
| Msa0154730 | Msa0364030 | -0.800012 | 1.759433e-48 | -8.615850e-47 |
| Msa0154730 | Msa0372100 | 0.809357 | 1.969171e-50 | -8.615850e-47 |
| Msa0154730 | Msa0373550 | 0.809381 | 1.946031e-50 | -8.615850e-47 |
| Msa0154730 | Msa0377350 | 0.805474 | 1.311654e-49 | -8.615850e-47 |
| Msa0154730 | Msa0383460 | 0.838383 | 2.971226e-57 | -8.615850e-47 |
| Msa0154730 | Msa0383930 | 0.833698 | 4.593921e-56 | -8.615850e-47 |
| Msa0154730 | Msa0384590 | 0.834453 | 2.970551e-56 | -8.615850e-47 |
| Msa0154730 | Msa0396330 | -0.801836 | 7.461803e-49 | -8.615850e-47 |
| Msa0154730 | Msa0403740 | -0.800754 | 1.242273e-48 | -8.615850e-47 |
| Msa0154730 | Msa0427260 | -0.831875 | 1.302620e-55 | -8.615850e-47 |
| Msa0154730 | Msa0428720 | -0.802384 | 5.756546e-49 | -8.615850e-47 |
| Msa0154730 | Msa0434140 | 0.852377 | 4.806234e-61 | -8.615850e-47 |
| Msa0154730 | Msa0434370 | 0.862238 | 5.837717e-64 | -8.615850e-47 |
| Msa0154730 | Msa0434660 | 0.819559 | 1.089930e-52 | -8.615850e-47 |
| Msa0154730 | Msa0465420 | 0.801478 | 8.837080e-49 | -8.615850e-47 |
| Msa0154730 | Msa0477390 | 0.824667 | 7.129782e-54 | -8.615850e-47 |
| Msa0154730 | Msa0477660 | 0.819972 | 8.770613e-53 | -8.615850e-47 |
| Msa0154730 | Msa0478130 | 0.838609 | 2.597175e-57 | -8.615850e-47 |
| Msa0154730 | Msa0478190 | 0.861506 | 9.778242e-64 | -8.615850e-47 |
| Msa0154730 | Msa0511380 | 0.847805 | 9.163861e-60 | -8.615850e-47 |
| Msa0154730 | Msa0514540 | 0.823148 | 1.618610e-53 | -8.615850e-47 |
| Msa0154730 | Msa0521720 | 0.822296 | 2.556119e-53 | -8.615850e-47 |
| Msa0154730 | Msa0522280 | 0.801207 | 1.003978e-48 | -8.615850e-47 |
| Msa0154730 | Msa0522540 | 0.827916 | 1.200845e-54 | -8.615850e-47 |
| Msa0154730 | Msa0538050 | -0.832274 | 1.037752e-55 | -8.615850e-47 |
| Msa0154730 | Msa0548420 | 0.810959 | 8.892598e-51 | -8.615850e-47 |
| Msa0154730 | Msa0563440 | 0.810537 | 1.097078e-50 | -8.615850e-47 |
| Msa0154730 | Msa0569980 | -0.831582 | 1.538686e-55 | -8.615850e-47 |
| Msa0154730 | Msa0570600 | 0.813493 | 2.488891e-51 | -8.615850e-47 |
| Msa0154730 | Msa0572730 | -0.809743 | 1.627473e-50 | -8.615850e-47 |
| Msa0154730 | Msa0575950 | 0.818676 | 1.731163e-52 | -8.615850e-47 |
| Msa0154730 | Msa0580210 | 0.802408 | 5.690762e-49 | -8.615850e-47 |
| Msa0154730 | Msa0585720 | -0.828297 | 9.722705e-55 | -8.615850e-47 |
| Msa0154730 | Msa0612880 | -0.810279 | 1.247286e-50 | -8.615850e-47 |
| Msa0154730 | Msa0615780 | 0.839816 | 1.263589e-57 | -8.615850e-47 |
| Msa0154730 | Msa0625900 | -0.819110 | 1.379046e-52 | -8.615850e-47 |
| Msa0154730 | Msa0655200 | 0.834463 | 2.953738e-56 | -8.615850e-47 |
| Msa0154730 | Msa0663580 | -0.819160 | 1.344003e-52 | -8.615850e-47 |
| Msa0154730 | Msa0663690 | -0.814354 | 1.608313e-51 | -8.615850e-47 |
| Msa0154730 | Msa0688610 | 0.843354 | 1.475637e-58 | -8.615850e-47 |
| Msa0154730 | Msa0695140 | 0.846398 | 2.227366e-59 | -8.615850e-47 |
| Msa0154730 | Msa0700410 | 0.816282 | 5.993515e-52 | -8.615850e-47 |
| Msa0154730 | Msa0705520 | 0.828540 | 8.492847e-55 | -8.615850e-47 |
| Msa0154730 | Msa0706130 | -0.821651 | 3.605387e-53 | -8.615850e-47 |
| Msa0154730 | Msa0707860 | -0.800646 | 1.307408e-48 | -8.615850e-47 |
| Msa0154730 | Msa0721930 | 0.817643 | 2.964464e-52 | -8.615850e-47 |
| Msa0154730 | Msa0734700 | 0.809856 | 1.538892e-50 | -8.615850e-47 |
| Msa0154730 | Msa0738460 | -0.810989 | 8.762197e-51 | -8.615850e-47 |
| Msa0154730 | Msa0762930 | 0.821532 | 3.839812e-53 | -8.615850e-47 |
| Msa0154730 | Msa0802950 | -0.804735 | 1.872903e-49 | -8.615850e-47 |
| Msa0154730 | Msa0805390 | 0.802579 | 5.247263e-49 | -8.615850e-47 |
| Msa0154730 | Msa0813610 | 0.802861 | 4.588446e-49 | -8.615850e-47 |
| Msa0154730 | Msa0828350 | 0.801681 | 8.028800e-49 | -8.615850e-47 |
| Msa0154730 | Msa0829580 | 0.803404 | 3.543622e-49 | -8.615850e-47 |
| Msa0154730 | Msa0831460 | -0.809455 | 1.876316e-50 | -8.615850e-47 |
| Msa0154730 | Msa0861400 | -0.804739 | 1.869256e-49 | -8.615850e-47 |
| Msa0154730 | Msa0913520 | 0.804201 | 2.420421e-49 | -8.615850e-47 |
| Msa0154730 | Msa0921860 | 0.807889 | 4.054658e-50 | -8.615850e-47 |
| Msa0154730 | Msa0947420 | 0.817763 | 2.785720e-52 | -8.615850e-47 |
| Msa0154730 | Msa0958830 | 0.816470 | 5.438277e-52 | -8.615850e-47 |
| Msa0154730 | Msa0967900 | -0.811824 | 5.771981e-51 | -8.615850e-47 |
| Msa0154730 | Msa0987670 | 0.812608 | 3.891025e-51 | -8.615850e-47 |
| Msa0154730 | Msa1026970 | 0.883577 | 3.988421e-71 | -8.615850e-47 |
| Msa0154730 | Msa1050970 | 0.801926 | 7.148556e-49 | -8.615850e-47 |
| Msa0154730 | Msa1067000 | 0.809570 | 1.772532e-50 | -8.615850e-47 |
| Msa0154730 | Msa1071420 | 0.847797 | 9.211228e-60 | -8.615850e-47 |
| Msa0154730 | Msa1074210 | 0.802118 | 6.529292e-49 | -8.615850e-47 |
| Msa0154730 | Msa1078600 | -0.814031 | 1.894805e-51 | -8.615850e-47 |
| Msa0154730 | Msa1078770 | -0.805651 | 1.204405e-49 | -8.615850e-47 |
| Msa0154730 | Msa1079780 | 0.803136 | 4.025180e-49 | -8.615850e-47 |
| Msa0154730 | Msa1111900 | 0.847044 | 1.483206e-59 | -8.615850e-47 |
| Msa0154730 | Msa1133760 | 0.857048 | 2.128218e-62 | -8.615850e-47 |
| Msa0154730 | Msa1146980 | 0.806432 | 8.251661e-50 | -8.615850e-47 |
| Msa0154730 | Msa1154310 | 0.881573 | 2.144933e-70 | -8.615850e-47 |
| Msa0154730 | Msa1169600 | -0.807998 | 3.842762e-50 | -8.615850e-47 |
| Msa0154730 | Msa1191960 | -0.801203 | 1.006094e-48 | -8.615850e-47 |
| Msa0154730 | Msa1197720 | 0.834357 | 3.140673e-56 | -8.615850e-47 |
| Msa0154730 | Msa1197820 | 0.809640 | 1.712113e-50 | -8.615850e-47 |
| Msa0154730 | Msa1202710 | -0.813428 | 2.572785e-51 | -8.615850e-47 |
| Msa0154730 | Msa1204240 | 0.847723 | 9.652579e-60 | -8.615850e-47 |
| Msa0154730 | Msa1204900 | -0.801263 | 9.779653e-49 | -8.615850e-47 |
| Msa0154730 | Msa1208530 | 0.855016 | 8.367550e-62 | -8.615850e-47 |
| Msa0154730 | Msa1213860 | 0.832135 | 1.123747e-55 | -8.615850e-47 |
| Msa0154730 | Msa1214710 | 0.828839 | 7.189965e-55 | -8.615850e-47 |
| Msa0154730 | Msa1214780 | 0.843129 | 1.694437e-58 | -8.615850e-47 |
| Msa0154730 | Msa1228600 | -0.821317 | 4.305528e-53 | -8.615850e-47 |
| Msa0154730 | Msa1251410 | 0.833199 | 6.117710e-56 | -8.615850e-47 |
| Msa0154730 | Msa1251500 | 0.826867 | 2.142747e-54 | -8.615850e-47 |
| Msa0154730 | Msa1262420 | 0.805903 | 1.066348e-49 | -8.615850e-47 |
| Msa0154730 | Msa1282670 | 0.803125 | 4.047041e-49 | -8.615850e-47 |
| Msa0154730 | Msa1292140 | 0.814901 | 1.216707e-51 | -8.615850e-47 |
| Msa0154730 | Msa1300730 | 0.836118 | 1.128530e-56 | -8.615850e-47 |
| Msa0154730 | Msa1301610 | -0.807511 | 4.878510e-50 | -8.615850e-47 |
| Msa0154730 | Msa1321840 | 0.806034 | 1.000813e-49 | -8.615850e-47 |
| Msa0154730 | Msa1348860 | -0.803792 | 2.943851e-49 | -8.615850e-47 |
| Msa0154730 | Msa1359520 | 0.806777 | 6.976212e-50 | -8.615850e-47 |
| Msa0154730 | Msa1369830 | 0.842463 | 2.546116e-58 | -8.615850e-47 |
| Msa0154730 | Msa1371540 | -0.802690 | 4.978172e-49 | -8.615850e-47 |
| Msa0154730 | Msa1375640 | 0.802887 | 4.531523e-49 | -8.615850e-47 |
| Msa0154730 | Msa1375730 | 0.843299 | 1.525838e-58 | -8.615850e-47 |
| Msa0154730 | Msa1377980 | -0.805774 | 1.134771e-49 | -8.615850e-47 |
| Msa0154730 | Msa1395380 | -0.800576 | 1.350629e-48 | -8.615850e-47 |
| Msa0154730 | Msa1401640 | -0.802953 | 4.392503e-49 | -8.615850e-47 |
| Msa0154730 | Msa1403940 | 0.836021 | 1.194204e-56 | -8.615850e-47 |
| Msa0154730 | Msa1408280 | -0.806187 | 9.290240e-50 | -8.615850e-47 |
| Msa0154730 | Msa1412270 | -0.809940 | 1.475918e-50 | -8.615850e-47 |
| Msa0154730 | Msa1429810 | 0.813446 | 2.548891e-51 | -8.615850e-47 |
| Msa0154730 | Msa1434300 | 0.822590 | 2.183556e-53 | -8.615850e-47 |
| Msa0154730 | Msa1434700 | 0.800856 | 1.184088e-48 | -8.615850e-47 |
| Msa0154730 | Msa1454300 | -0.803127 | 4.043665e-49 | -8.615850e-47 |
| Msa0154730 | Msa1456180 | -0.810078 | 1.378511e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0154730 | MtrunA17_Chr1g0186431 | 98.551 | 759 | 11 | 0 | 1 | 759 | 1 | 759 | 0.0 | 1541 |
| Msa0154730 | MtrunA17_Chr1g0168161 | 71.278 | 759 | 211 | 6 | 1 | 754 | 1 | 757 | 0.0 | 1067 |
| Msa0154730 | MtrunA17_Chr7g0274831 | 57.625 | 741 | 301 | 6 | 23 | 757 | 28 | 761 | 0.0 | 885 |
| Msa0154730 | MtrunA17_Chr1g0190021 | 56.876 | 749 | 305 | 9 | 19 | 757 | 18 | 758 | 0.0 | 840 |
| Msa0154730 | MtrunA17_Chr4g0013831 | 41.970 | 741 | 397 | 18 | 29 | 750 | 5 | 731 | 1.77e-177 | 526 |
| Msa0154730 | MtrunA17_Chr7g0269631 | 40.729 | 631 | 349 | 13 | 29 | 645 | 5 | 624 | 1.25e-129 | 399 |
| Msa0154730 | MtrunA17_Chr4g0077091 | 86.667 | 75 | 9 | 1 | 686 | 759 | 1 | 75 | 1.93e-35 | 128 |
| Msa0154730 | MtrunA17_Chr8g0377481 | 31.579 | 133 | 82 | 3 | 631 | 755 | 837 | 968 | 6.70e-15 | 79.0 |
| Msa0154730 | MtrunA17_Chr8g0377481 | 22.959 | 392 | 244 | 10 | 344 | 690 | 371 | 749 | 7.25e-14 | 75.9 |
| Msa0154730 | MtrunA17_Chr5g0405701 | 25.369 | 339 | 209 | 8 | 355 | 665 | 499 | 821 | 9.82e-15 | 78.6 |
| Msa0154730 | MtrunA17_Chr3g0122391 | 30.534 | 131 | 83 | 3 | 631 | 754 | 895 | 1024 | 4.41e-14 | 76.6 |
| Msa0154730 | MtrunA17_Chr3g0122391 | 21.888 | 466 | 307 | 11 | 344 | 758 | 419 | 878 | 6.65e-14 | 75.9 |
| Msa0154730 | MtrunA17_Chr5g0447641 | 21.778 | 450 | 294 | 11 | 344 | 741 | 596 | 1039 | 1.27e-13 | 75.1 |
| Msa0154730 | MtrunA17_Chr8g0371601 | 22.687 | 335 | 224 | 8 | 355 | 665 | 461 | 784 | 1.61e-13 | 74.7 |
| Msa0154730 | MtrunA17_Chr8g0392301 | 22.653 | 490 | 290 | 13 | 344 | 757 | 362 | 838 | 1.90e-12 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0154730 | AT3G23150.1 | 59.847 | 782 | 278 | 13 | 1 | 758 | 1 | 770 | 0.0 | 884 |
| Msa0154730 | AT3G04580.2 | 58.043 | 746 | 294 | 12 | 23 | 754 | 21 | 761 | 0.0 | 830 |
| Msa0154730 | AT3G04580.1 | 58.043 | 746 | 294 | 12 | 23 | 754 | 21 | 761 | 0.0 | 830 |
| Msa0154730 | AT3G23150.2 | 61.937 | 599 | 202 | 10 | 1 | 582 | 1 | 590 | 0.0 | 692 |
| Msa0154730 | AT1G04310.1 | 53.859 | 622 | 255 | 10 | 9 | 612 | 16 | 623 | 0.0 | 595 |
| Msa0154730 | AT1G04310.2 | 53.859 | 622 | 255 | 10 | 9 | 612 | 16 | 623 | 0.0 | 595 |
| Msa0154730 | AT1G66340.1 | 39.685 | 761 | 400 | 18 | 29 | 757 | 4 | 737 | 1.28e-170 | 509 |
| Msa0154730 | AT2G40940.1 | 40.981 | 571 | 321 | 10 | 29 | 589 | 4 | 568 | 4.52e-125 | 387 |
| Msa0154730 | AT5G35750.1 | 24.524 | 473 | 291 | 15 | 332 | 758 | 565 | 1017 | 6.60e-19 | 92.4 |
| Msa0154730 | AT5G35750.1 | 30.263 | 152 | 83 | 3 | 624 | 754 | 1024 | 1173 | 6.73e-13 | 73.2 |
| Msa0154730 | AT1G27320.1 | 21.875 | 480 | 307 | 10 | 325 | 757 | 410 | 868 | 1.45e-16 | 85.1 |
| Msa0154730 | AT1G27320.1 | 26.966 | 178 | 99 | 5 | 603 | 754 | 856 | 1028 | 5.73e-12 | 70.1 |
| Msa0154730 | AT2G01830.5 | 23.978 | 367 | 224 | 8 | 344 | 661 | 440 | 800 | 1.96e-12 | 71.6 |
| Msa0154730 | AT2G01830.5 | 29.851 | 134 | 81 | 3 | 630 | 751 | 929 | 1061 | 3.63e-11 | 67.4 |
| Msa0154730 | AT2G01830.1 | 23.577 | 369 | 223 | 9 | 344 | 661 | 428 | 788 | 2.14e-12 | 71.6 |
| Msa0154730 | AT2G01830.1 | 29.851 | 134 | 81 | 3 | 630 | 751 | 917 | 1049 | 3.44e-11 | 67.4 |
| Msa0154730 | AT2G01830.4 | 23.577 | 369 | 223 | 9 | 344 | 661 | 428 | 788 | 2.14e-12 | 71.6 |
| Msa0154730 | AT2G01830.4 | 29.851 | 134 | 81 | 3 | 630 | 751 | 917 | 1049 | 3.44e-11 | 67.4 |
| Msa0154730 | AT2G01830.6 | 23.577 | 369 | 223 | 9 | 344 | 661 | 428 | 788 | 2.14e-12 | 71.6 |
| Msa0154730 | AT2G01830.6 | 29.851 | 134 | 81 | 3 | 630 | 751 | 917 | 1049 | 3.44e-11 | 67.4 |
| Msa0154730 | AT2G01830.3 | 23.577 | 369 | 223 | 9 | 344 | 661 | 428 | 788 | 2.14e-12 | 71.6 |
| Msa0154730 | AT2G01830.3 | 29.851 | 134 | 81 | 3 | 630 | 751 | 917 | 1049 | 3.44e-11 | 67.4 |
| Msa0154730 | AT2G17820.1 | 30.935 | 139 | 95 | 1 | 355 | 492 | 488 | 626 | 2.50e-12 | 71.2 |
| Msa0154730 | AT2G01830.2 | 23.577 | 369 | 223 | 9 | 344 | 661 | 451 | 811 | 2.96e-12 | 70.9 |
| Msa0154730 | AT2G01830.2 | 29.851 | 134 | 81 | 3 | 630 | 751 | 940 | 1072 | 3.29e-11 | 67.8 |
Find 208 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGCCTATGCACTCGATTT+TGG | 0.157778 | 1_4:-19493581 | Msa0154730:CDS |
| TTTCTGAATGGTTGGACTTA+TGG | 0.204071 | 1_4:-19494432 | Msa0154730:CDS |
| AAAGTAATGAACTTTGTTAA+TGG | 0.234678 | 1_4:-19495445 | Msa0154730:five_prime_UTR |
| TTAATAACTTAAGTTATCTT+TGG | 0.242888 | 1_4:-19494807 | Msa0154730:five_prime_UTR |
| GTGGACTATTGAGAGTATTT+TGG | 0.244417 | 1_4:-19494604 | Msa0154730:CDS |
| CCTTTGGAGATAAGGTCTTT+TGG | 0.244781 | 1_4:-19493418 | Msa0154730:CDS |
| CAAATGCATGTGTGTTTATA+AGG | 0.254306 | 1_4:-19493359 | Msa0154730:CDS |
| TTCCATTCAAGTCATTCTTT+TGG | 0.259941 | 1_4:-19492133 | Msa0154730:CDS |
| TGAAGTCTCATTCTTGTTCT+TGG | 0.266032 | 1_4:-19491830 | Msa0154730:three_prime_UTR |
| TAATAACTTAAGTTATCTTT+GGG | 0.267336 | 1_4:-19494806 | Msa0154730:five_prime_UTR |
| AATTTATATATATCCTTAGA+TGG | 0.290960 | 1_4:-19494765 | Msa0154730:five_prime_UTR |
| TAAGGATATATATAAATTAT+TGG | 0.299226 | 1_4:+19494770 | None:intergenic |
| AAGTAATGAACTTTGTTAAT+GGG | 0.304545 | 1_4:-19495444 | Msa0154730:five_prime_UTR |
| GGAAGTTTAAAAGCGGAAAT+AGG | 0.304993 | 1_4:-19492062 | Msa0154730:CDS |
| GCAGTCAAGGCAACAATTAT+AGG | 0.308408 | 1_4:+19492039 | None:intergenic |
| GTCTTTACCAAACCATGTTA+TGG | 0.315997 | 1_4:-19493308 | Msa0154730:CDS |
| GCGCTTGCTGTTTCCAGTCT+TGG | 0.319928 | 1_4:-19493952 | Msa0154730:CDS |
| CAGACCTCTCAACATTGAAT+TGG | 0.323833 | 1_4:+19492287 | None:intergenic |
| AGCTCAGTGTCCTCAGGTCC+CGG | 0.332201 | 1_4:-19493064 | Msa0154730:CDS |
| AATTAAGGTGGTTGCTGATC+AGG | 0.332673 | 1_4:-19493764 | Msa0154730:CDS |
| TTCTTCTTCGGTTTCAATTA+CGG | 0.333952 | 1_4:-19492365 | Msa0154730:CDS |
| TTATAGAACACAGTTCTCTT+TGG | 0.335971 | 1_4:-19491800 | Msa0154730:three_prime_UTR |
| GACATCTCTACGTGGAAAAT+TGG | 0.336590 | 1_4:+19491764 | None:intergenic |
| CTGATTCTTCAATCCATCTA+AGG | 0.342359 | 1_4:+19494752 | None:intergenic |
| TGTATGCAGATTGGTGTTAA+TGG | 0.343123 | 1_4:-19491988 | Msa0154730:CDS |
| CTCATCATCACAATTACATC+TGG | 0.349464 | 1_4:+19494635 | None:intergenic |
| GTGGAGCTTTCGAAAACATT+AGG | 0.351077 | 1_4:-19494138 | Msa0154730:CDS |
| CATATTGGTCTTGATTCTTC+CGG | 0.355811 | 1_4:-19493827 | Msa0154730:CDS |
| TGCACCCACCTTCTTGTCAT+TGG | 0.359427 | 1_4:+19495491 | None:intergenic |
| GTAAATATTAGATTTGAGAT+AGG | 0.360085 | 1_4:-19493115 | Msa0154730:CDS |
| TCAGGCTTGTTATGCCATAT+TGG | 0.362096 | 1_4:-19493842 | Msa0154730:CDS |
| TGCTTCTCAAAGTGAAGGTC+AGG | 0.367109 | 1_4:-19494308 | Msa0154730:CDS |
| TTTGAATGCCTTACTGTCAT+TGG | 0.369155 | 1_4:-19492168 | Msa0154730:CDS |
| CTCCAAATGCCTGATATAGA+TGG | 0.374320 | 1_4:-19492108 | Msa0154730:CDS |
| CTTATAAACACACATGCATT+TGG | 0.375755 | 1_4:+19493360 | None:intergenic |
| TCAGGAGCTGGAGATAATTA+AGG | 0.381209 | 1_4:-19493779 | Msa0154730:CDS |
| TCTTTACCAAACCATGTTAT+GGG | 0.386190 | 1_4:-19493307 | Msa0154730:CDS |
| ATCCATCTATATCAGGCATT+TGG | 0.388907 | 1_4:+19492106 | None:intergenic |
| GGATGATGGAAGATTTCCTT+TGG | 0.389319 | 1_4:-19493434 | Msa0154730:CDS |
| TTATCTTTGGGGAATGACTA+TGG | 0.398113 | 1_4:-19494794 | Msa0154730:five_prime_UTR |
| ACAACATCTGGATCAGTAAT+CGG | 0.399774 | 1_4:+19494021 | None:intergenic |
| TACTATTCTGTATACTACTT+TGG | 0.402484 | 1_4:-19494160 | Msa0154730:CDS |
| TGAGGAATACCGTGAGTATA+TGG | 0.405398 | 1_4:+19492399 | None:intergenic |
| GCTCGAACGTCCCTTTCAAA+TGG | 0.406052 | 1_4:-19494503 | Msa0154730:CDS |
| GAGATTCTGCGGCACGAAAC+CGG | 0.409851 | 1_4:+19495578 | None:intergenic |
| AAAGCATGACACTTCTTCTT+CGG | 0.410525 | 1_4:-19492377 | Msa0154730:CDS |
| TTCATAAGCTAGAATTTCAT+AGG | 0.411135 | 1_4:+19495625 | None:intergenic |
| GGATTGTAACCATGGGGAAG+GGG | 0.412828 | 1_4:-19493233 | Msa0154730:CDS |
| ACTTCGAATCCATCTATATC+AGG | 0.414647 | 1_4:+19492099 | None:intergenic |
| GATCTTAACAAAGCTTTGTC+AGG | 0.415596 | 1_4:+19495357 | None:intergenic |
| GATCCTAGTATTTCGAGTTT+CGG | 0.416197 | 1_4:-19493209 | Msa0154730:CDS |
| GCTCAGTGTCCTCAGGTCCC+GGG | 0.416308 | 1_4:-19493063 | Msa0154730:CDS |
| TTCCGTGACTTCCGCTTCTA+CGG | 0.417846 | 1_4:-19492193 | Msa0154730:CDS |
| TCAACTTATGAGAGAGAAGT+TGG | 0.419273 | 1_4:-19493701 | Msa0154730:CDS |
| CTTTAAGATTCTCACTGCCT+TGG | 0.419423 | 1_4:-19494373 | Msa0154730:CDS |
| AGTCAAGGGAGGAATGAAAA+AGG | 0.420629 | 1_4:-19493175 | Msa0154730:CDS |
| TTGAAGAATCAGCAGCATAT+TGG | 0.423941 | 1_4:-19494741 | Msa0154730:five_prime_UTR |
| GAAGATTTCCTTTGGAGATA+AGG | 0.424573 | 1_4:-19493426 | Msa0154730:CDS |
| GATTGTAACCATGGGGAAGG+GGG | 0.427873 | 1_4:-19493232 | Msa0154730:CDS |
| TCCGTGACTTCCGCTTCTAC+GGG | 0.428889 | 1_4:-19492192 | Msa0154730:CDS |
| GAATGCTATGATGGCAAGCC+AGG | 0.432214 | 1_4:-19493644 | Msa0154730:CDS |
| CATGTGTGTTTATAAGGGCT+TGG | 0.432309 | 1_4:-19493353 | Msa0154730:CDS |
| TCGAAGTCGCCGCAAGGATT+CGG | 0.432385 | 1_4:-19492083 | Msa0154730:CDS |
| AATAAATATAATCAGAAGAA+TGG | 0.434544 | 1_4:-19491619 | Msa0154730:three_prime_UTR |
| ACCTAGATCTTGGAGCAATC+AGG | 0.441634 | 1_4:-19493797 | Msa0154730:CDS |
| CTGCCGAAACTCGAAATACT+AGG | 0.444425 | 1_4:+19493206 | None:intergenic |
| GCTCCAAGATCTAGGTTCTT+CGG | 0.445823 | 1_4:+19493804 | None:intergenic |
| TTCTTCTGCACTTGCAGTCA+AGG | 0.446455 | 1_4:+19492026 | None:intergenic |
| ACTAGATGAGCTTGGTCTCC+AGG | 0.446804 | 1_4:+19493144 | None:intergenic |
| AGTTGATGCAAGGAAACTTA+TGG | 0.447288 | 1_4:-19492428 | Msa0154730:CDS |
| ATGTGTGTTTATAAGGGCTT+GGG | 0.448667 | 1_4:-19493352 | Msa0154730:CDS |
| TCATCACCCATAACATGGTT+TGG | 0.448703 | 1_4:+19493301 | None:intergenic |
| TCCTGATTGCTCCAAGATCT+AGG | 0.449928 | 1_4:+19493796 | None:intergenic |
| CGGAAGAATCAAGACCAATA+TGG | 0.450177 | 1_4:+19493828 | None:intergenic |
| GGCATTCGAATGGCAGCAAC+CGG | 0.452555 | 1_4:+19493910 | None:intergenic |
| GCAATTCCTTGCATCAAAAC+CGG | 0.454415 | 1_4:+19491952 | None:intergenic |
| CGGCCGAAGAACCTAGATCT+TGG | 0.454895 | 1_4:-19493807 | Msa0154730:CDS |
| CTCGAACGTCCCTTTCAAAT+GGG | 0.457846 | 1_4:-19494502 | Msa0154730:CDS |
| GCGCAATCGAGCTTTGCAAC+TGG | 0.458884 | 1_4:-19493674 | Msa0154730:CDS |
| AACAGTAGTGATTCTGAAGT+TGG | 0.461479 | 1_4:-19493088 | Msa0154730:CDS |
| TAATGGAGTAATCCGAAAAC+CGG | 0.467924 | 1_4:-19491971 | Msa0154730:CDS |
| AACTGTTGACAGGGCCAGAC+TGG | 0.473239 | 1_4:-19494864 | Msa0154730:intron |
| ATAATCAATTTCTACCAGTC+TGG | 0.474547 | 1_4:+19494850 | None:intergenic |
| GCATATGGTTGGGAATCTAC+TGG | 0.475238 | 1_4:-19493254 | Msa0154730:CDS |
| ACGAAATAAAGCAACTCAAG+AGG | 0.478092 | 1_4:+19494531 | None:intergenic |
| AGAAGAAGTGTCATGCTTTG+AGG | 0.480685 | 1_4:+19492381 | None:intergenic |
| GAATGCTTACTCAAGAGATT+CGG | 0.482071 | 1_4:-19494200 | Msa0154730:CDS |
| AAGTCATGAGTGATGGTATG+AGG | 0.483265 | 1_4:-19493603 | Msa0154730:CDS |
| TGGGATCTTGGACGGGAGGT+TGG | 0.484581 | 1_4:-19494261 | Msa0154730:CDS |
| GTTGGCAGCTCAGTGTCCTC+AGG | 0.485068 | 1_4:-19493070 | Msa0154730:CDS |
| TCAGCAGCATATTGGATCAA+TGG | 0.486018 | 1_4:-19494733 | Msa0154730:exon |
| TCTGAAATGAGTTTCTTGCC+TGG | 0.486268 | 1_4:+19493626 | None:intergenic |
| ATCCAAAAGAATGACTTGAA+TGG | 0.489294 | 1_4:+19492131 | None:intergenic |
| AAATGCATGTGTGTTTATAA+GGG | 0.490040 | 1_4:-19493358 | Msa0154730:CDS |
| TGGTCTTATTATGAAGCAAA+AGG | 0.490084 | 1_4:-19494241 | Msa0154730:CDS |
| CATCATTTATCAAGTTTGAA+AGG | 0.492324 | 1_4:+19493476 | None:intergenic |
| TAAATATTAGATTTGAGATA+GGG | 0.495686 | 1_4:-19493114 | Msa0154730:CDS |
| ATATACCAGTGATAGATATG+AGG | 0.497274 | 1_4:-19493032 | Msa0154730:CDS |
| ATCTTGGAGCAATCAGGAGC+TGG | 0.497970 | 1_4:-19493791 | Msa0154730:CDS |
| TCCTTTGCTTCTCAAAGTGA+AGG | 0.498700 | 1_4:-19494313 | Msa0154730:CDS |
| CTCAGTGTCCTCAGGTCCCG+GGG | 0.500200 | 1_4:-19493062 | Msa0154730:CDS |
| GACAGCTCTGCAAAGGATGA+TGG | 0.501785 | 1_4:-19493448 | Msa0154730:CDS |
| TCCCGTAGAAGCGGAAGTCA+CGG | 0.504322 | 1_4:+19492191 | None:intergenic |
| TTTCGAGTTTCGGCAGACGC+TGG | 0.505966 | 1_4:-19493199 | Msa0154730:CDS |
| TGGATTGTAACCATGGGGAA+GGG | 0.508641 | 1_4:-19493234 | Msa0154730:CDS |
| TATTCTGTATACTACTTTGG+TGG | 0.509087 | 1_4:-19494157 | Msa0154730:CDS |
| GAGAGGTCTGCAAGTTCTGT+TGG | 0.509235 | 1_4:-19492274 | Msa0154730:CDS |
| ATTGTAACCATGGGGAAGGG+GGG | 0.512664 | 1_4:-19493231 | Msa0154730:CDS |
| TGATTTGATGCTAAAGAAAG+TGG | 0.513744 | 1_4:-19495415 | Msa0154730:five_prime_UTR |
| TGGTGATTTCTTGATTGCTG+TGG | 0.516847 | 1_4:-19494568 | Msa0154730:CDS |
| AGATTCTGCGGCACGAAACC+GGG | 0.517072 | 1_4:+19495579 | None:intergenic |
| AAGTGCAGAAGAAGATTTGT+GGG | 0.517262 | 1_4:-19492016 | Msa0154730:CDS |
| CTTACTGTCATTGGACCTGT+TGG | 0.517705 | 1_4:-19492159 | Msa0154730:CDS |
| ACCTTCACTTTGAGAAGCAA+AGG | 0.521628 | 1_4:+19494312 | None:intergenic |
| CAACAGGTCCAATGACAGTA+AGG | 0.522523 | 1_4:+19492160 | None:intergenic |
| CTCAAGAGGGATTGAGAAGT+AGG | 0.523719 | 1_4:+19494545 | None:intergenic |
| TGTTTCTAGTGACGCAGGAC+CGG | 0.528437 | 1_4:-19493929 | Msa0154730:CDS |
| GTTGCGTTCTGAAGATTCCC+CGG | 0.528905 | 1_4:+19492314 | None:intergenic |
| AAATTACAAACACGTAACAT+TGG | 0.530189 | 1_4:+19493889 | None:intergenic |
| GGCGAGAAGGAATGCTATGA+TGG | 0.531744 | 1_4:-19493653 | Msa0154730:CDS |
| TCGGCAGACGCTGGAAGTCA+AGG | 0.534100 | 1_4:-19493190 | Msa0154730:CDS |
| AAACTTGATAAATGATGCCA+TGG | 0.538571 | 1_4:-19493470 | Msa0154730:CDS |
| CTCAAAAGAATTCTGATGCA+AGG | 0.538760 | 1_4:-19491922 | Msa0154730:CDS |
| ATCTACTGGATTGTAACCAT+GGG | 0.542949 | 1_4:-19493240 | Msa0154730:CDS |
| TTGCGTTCTGAAGATTCCCC+GGG | 0.544742 | 1_4:+19492315 | None:intergenic |
| GAACAAGGACCCATTTGAAA+GGG | 0.546654 | 1_4:+19494493 | None:intergenic |
| TCTGCCCTCATATCTATCAC+TGG | 0.547398 | 1_4:+19493027 | None:intergenic |
| TGAACAAGGACCCATTTGAA+AGG | 0.548158 | 1_4:+19494492 | None:intergenic |
| GCAATAGCCATCTCTGAACC+CGG | 0.551030 | 1_4:-19492333 | Msa0154730:CDS |
| GGCAGTGAGAATCTTAAAGA+TGG | 0.551039 | 1_4:+19494377 | None:intergenic |
| CTCTCTCAAAACTAAAACAA+CGG | 0.552348 | 1_4:-19495846 | Msa0154730:five_prime_UTR |
| ACTTGAATGGAAGATCCAAC+AGG | 0.554016 | 1_4:+19492144 | None:intergenic |
| CAAGTGCAGAAGAAGATTTG+TGG | 0.554779 | 1_4:-19492017 | Msa0154730:CDS |
| TAACAAGCCTGAGTTAGCTC+AGG | 0.557598 | 1_4:+19493853 | None:intergenic |
| ACATCACCACTAGATGAGCT+TGG | 0.559230 | 1_4:+19493136 | None:intergenic |
| CGAAATAAAGCAACTCAAGA+GGG | 0.560282 | 1_4:+19494532 | None:intergenic |
| TTCAGAGATGGCTATTGCAA+TGG | 0.562065 | 1_4:+19492338 | None:intergenic |
| TGTTAATTGCAGTTGATGCA+AGG | 0.562733 | 1_4:-19492438 | Msa0154730:intron |
| TATTTGCAAGAGGATAGTCC+AGG | 0.567491 | 1_4:-19492993 | Msa0154730:intron |
| AATCTACTGGATTGTAACCA+TGG | 0.568873 | 1_4:-19493241 | Msa0154730:CDS |
| TGGGAAAGATGTATGCAGAT+TGG | 0.570128 | 1_4:-19491997 | Msa0154730:CDS |
| ATCCTTTGCAGAGCTGTCCA+TGG | 0.572923 | 1_4:+19493453 | None:intergenic |
| GTGATGATGAGAACAGTTTG+TGG | 0.575845 | 1_4:-19494623 | Msa0154730:CDS |
| CTGGATTGTAACCATGGGGA+AGG | 0.575928 | 1_4:-19493235 | Msa0154730:CDS |
| AAAGACATGGGATCTTGGAC+GGG | 0.576526 | 1_4:-19494268 | Msa0154730:CDS |
| TACGTGGAAAATTGGTAGCA+AGG | 0.578298 | 1_4:+19491772 | None:intergenic |
| AAAAGACATGGGATCTTGGA+CGG | 0.578361 | 1_4:-19494269 | Msa0154730:CDS |
| AGAGAAAATGAAAGTGTTGG+TGG | 0.580969 | 1_4:+19495703 | None:intergenic |
| GAATGAACAGAAGCTTATTG+TGG | 0.580973 | 1_4:-19493524 | Msa0154730:CDS |
| CAATAGCCATCTCTGAACCC+GGG | 0.581848 | 1_4:-19492332 | Msa0154730:CDS |
| TCCTCTCATCACCCATAACA+TGG | 0.582290 | 1_4:+19493296 | None:intergenic |
| GTCACTAGAAACACCAAGAC+TGG | 0.584089 | 1_4:+19493939 | None:intergenic |
| CAAGATCTAGGTTCTTCGGC+CGG | 0.584183 | 1_4:+19493808 | None:intergenic |
| CAGAATAGTATGTCTATCGA+GGG | 0.585211 | 1_4:+19494173 | None:intergenic |
| GAGATGGCTATTGCAATGGA+AGG | 0.587280 | 1_4:+19492342 | None:intergenic |
| ATTATTGTTAAGATAGAACA+AGG | 0.588864 | 1_4:+19495677 | None:intergenic |
| CGGCAGACGCTGGAAGTCAA+GGG | 0.589768 | 1_4:-19493189 | Msa0154730:CDS |
| TGAGCTTTAGTATTTGCAAG+AGG | 0.590203 | 1_4:-19493003 | Msa0154730:CDS |
| AGGAACACCTGAGCTAACTC+AGG | 0.590712 | 1_4:-19493860 | Msa0154730:CDS |
| TGCAGCATGCGATAGAGCCA+CGG | 0.591811 | 1_4:+19493738 | None:intergenic |
| GCTTTGTTAAGATCTGATCA+AGG | 0.592040 | 1_4:-19495348 | Msa0154730:five_prime_UTR |
| CCAAAAGACCTTATCTCCAA+AGG | 0.594431 | 1_4:+19493418 | None:intergenic |
| ACCATGTTATGGGTGATGAG+AGG | 0.595070 | 1_4:-19493297 | Msa0154730:CDS |
| ATGTTATGGGTGATGAGAGG+AGG | 0.595173 | 1_4:-19493294 | Msa0154730:CDS |
| TTTCAATAAAGGGTCGCACC+CGG | 0.595477 | 1_4:-19495597 | Msa0154730:five_prime_UTR |
| GAGCTTTGCAACTGGCGAGA+AGG | 0.595611 | 1_4:-19493666 | Msa0154730:CDS |
| AGATTCCCCGGGTTCAGAGA+TGG | 0.597080 | 1_4:+19492326 | None:intergenic |
| GCTTCTCAAAGTGAAGGTCA+GGG | 0.597196 | 1_4:-19494307 | Msa0154730:CDS |
| ATGGATTCGAAGTCGCCGCA+AGG | 0.597554 | 1_4:-19492089 | Msa0154730:CDS |
| TCACTCATGAATTGAACGCA+AGG | 0.600049 | 1_4:-19494062 | Msa0154730:CDS |
| GCATTCAAATCCCGTAGAAG+CGG | 0.602716 | 1_4:+19492182 | None:intergenic |
| TATTCCAATTCAATGTTGAG+AGG | 0.606759 | 1_4:-19492291 | Msa0154730:CDS |
| TGTTATGGGTGATGAGAGGA+GGG | 0.608371 | 1_4:-19493293 | Msa0154730:CDS |
| ACTGGTATATGTCCTACCCC+CGG | 0.609146 | 1_4:+19493045 | None:intergenic |
| TCATCATCACAATTACATCT+GGG | 0.609736 | 1_4:+19494636 | None:intergenic |
| AATAACTTAAGTTATCTTTG+GGG | 0.610377 | 1_4:-19494805 | Msa0154730:five_prime_UTR |
| AAACACACATGCATTTGGCA+AGG | 0.611821 | 1_4:+19493365 | None:intergenic |
| GACATGGGATCTTGGACGGG+AGG | 0.611959 | 1_4:-19494265 | Msa0154730:CDS |
| TTTCAGAAAGTCATGAGTGA+TGG | 0.612216 | 1_4:-19493610 | Msa0154730:CDS |
| AGATACACACAAGAGGATAG+AGG | 0.612399 | 1_4:+19494680 | None:intergenic |
| TTTAAACTTCCGAATCCTTG+CGG | 0.614777 | 1_4:+19492074 | None:intergenic |
| ACAGAATAGTATGTCTATCG+AGG | 0.617871 | 1_4:+19494172 | None:intergenic |
| TATACCAGTGATAGATATGA+GGG | 0.618668 | 1_4:-19493031 | Msa0154730:CDS |
| CTTGGTGTTTCTAGTGACGC+AGG | 0.622071 | 1_4:-19493934 | Msa0154730:CDS |
| AATCCCAAAATCGAGTGCAT+AGG | 0.622628 | 1_4:+19493577 | None:intergenic |
| ACGTAACATTGGCATTCGAA+TGG | 0.630068 | 1_4:+19493900 | None:intergenic |
| GATGCAAGGAAACTTATGGT+TGG | 0.630539 | 1_4:-19492424 | Msa0154730:CDS |
| TGAAGAGAAAATGAAAGTGT+TGG | 0.632895 | 1_4:+19495700 | None:intergenic |
| CGCAGTTGCACAAGACACCA+AGG | 0.633662 | 1_4:+19494356 | None:intergenic |
| TGCCATGGACAGCTCTGCAA+AGG | 0.638516 | 1_4:-19493455 | Msa0154730:CDS |
| TCTTATTATGAAGCAAAAGG+AGG | 0.642117 | 1_4:-19494238 | Msa0154730:CDS |
| GGTTGCTGATCAGGTTGCCG+TGG | 0.646373 | 1_4:-19493755 | Msa0154730:CDS |
| TAAAAGCAATGAACTGAACA+AGG | 0.647813 | 1_4:+19494478 | None:intergenic |
| TTGTTGCAGATACACACAAG+AGG | 0.652660 | 1_4:+19494673 | None:intergenic |
| GTTTGCAAAATTGTGCTGTG+TGG | 0.653112 | 1_4:-19494116 | Msa0154730:CDS |
| TTACTGTGGAAGAGATTCTG+CGG | 0.664854 | 1_4:+19495567 | None:intergenic |
| TGGAGACCAAGCTCATCTAG+TGG | 0.665111 | 1_4:-19493142 | Msa0154730:CDS |
| AGGATTCGGAAGTTTAAAAG+CGG | 0.670736 | 1_4:-19492069 | Msa0154730:CDS |
| GGAGCTGGAGATAATTAAGG+TGG | 0.673703 | 1_4:-19493776 | Msa0154730:CDS |
| ACCATAAGCTGAAAAGTGTG+AGG | 0.673832 | 1_4:+19494408 | None:intergenic |
| AATAGCCATCTCTGAACCCG+GGG | 0.674767 | 1_4:-19492331 | Msa0154730:CDS |
| TTGTTAAGATCTGATCAAGG+TGG | 0.678949 | 1_4:-19495345 | Msa0154730:five_prime_UTR |
| TCATGAGTGATGGTATGAGG+AGG | 0.683443 | 1_4:-19493600 | Msa0154730:CDS |
| TGGTTGGTACCATATACTCA+CGG | 0.687045 | 1_4:-19492408 | Msa0154730:CDS |
| CAGACGCTGGAAGTCAAGGG+AGG | 0.709276 | 1_4:-19493186 | Msa0154730:CDS |
| TCTACTGGATTGTAACCATG+GGG | 0.741326 | 1_4:-19493239 | Msa0154730:CDS |
| TCAGTGTCCTCAGGTCCCGG+GGG | 0.744374 | 1_4:-19493061 | Msa0154730:CDS |
| TTATGTATGACATCTCTACG+TGG | 0.754667 | 1_4:+19491756 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTAATTTTTTAATT+TGG | - | chr1_4:19491853-19491872 | Msa0154730:three_prime_UTR | 0.0% |
| !!! | GTTTTTTTAATATTATTTCT+TGG | - | chr1_4:19492206-19492225 | Msa0154730:CDS | 10.0% |
| !!! | ATGATTTTTTTTTTATTCTA+TGG | - | chr1_4:19492268-19492287 | Msa0154730:CDS | 10.0% |
| !!! | AATTAATTTGTGAAAAAATA+TGG | - | chr1_4:19492428-19492447 | Msa0154730:CDS | 10.0% |
| !!! | ATATTATTTTTTGTTTGATT+TGG | - | chr1_4:19492472-19492491 | Msa0154730:intron | 10.0% |
| !! | TAAGGATATATATAAATTAT+TGG | + | chr1_4:19492621-19492640 | None:intergenic | 10.0% |
| !!! | AAAAAAAACAATTTTTACTG+TGG | + | chr1_4:19491838-19491857 | None:intergenic | 15.0% |
| !!! | ATTGTATAATTTTTTTTAGG+TGG | - | chr1_4:19492142-19492161 | Msa0154730:CDS | 15.0% |
| !!! | TTGTATAATTTTTTTTAGGT+GGG | - | chr1_4:19492143-19492162 | Msa0154730:CDS | 15.0% |
| !!! | TTAATATTATTTCTTGGATT+TGG | - | chr1_4:19492212-19492231 | Msa0154730:CDS | 15.0% |
| !! | GTTAACTTAAATTATAAGAT+TGG | - | chr1_4:19492392-19492411 | Msa0154730:CDS | 15.0% |
| !!! | AATATGGTTAATTTTTGTTT+AGG | - | chr1_4:19492444-19492463 | Msa0154730:intron | 15.0% |
| !! | TTAATAACTTAAGTTATCTT+TGG | - | chr1_4:19492581-19492600 | Msa0154730:intron | 15.0% |
| !! | TAATAACTTAAGTTATCTTT+GGG | - | chr1_4:19492582-19492601 | Msa0154730:intron | 15.0% |
| !! | AATTTATATATATCCTTAGA+TGG | - | chr1_4:19492623-19492642 | Msa0154730:intron | 15.0% |
| !!! | TAAATATTAGATTTGAGATA+GGG | - | chr1_4:19494274-19494293 | Msa0154730:CDS | 15.0% |
| !! | AATAAATATAATCAGAAGAA+TGG | - | chr1_4:19495769-19495788 | Msa0154730:five_prime_UTR | 15.0% |
| !!! | TGTTTTGTGTTTTTTTGATA+TGG | + | chr1_4:19491630-19491649 | None:intergenic | 20.0% |
| !! | ATTATTGTTAAGATAGAACA+AGG | + | chr1_4:19491714-19491733 | None:intergenic | 20.0% |
| !!! | TATGAAGCTATTTTCAATAA+AGG | - | chr1_4:19491780-19491799 | Msa0154730:three_prime_UTR | 20.0% |
| !!! | ATGAAGCTATTTTCAATAAA+GGG | - | chr1_4:19491781-19491800 | Msa0154730:three_prime_UTR | 20.0% |
| !! | AAAGTAATGAACTTTGTTAA+TGG | - | chr1_4:19491943-19491962 | Msa0154730:CDS | 20.0% |
| !! | AAGTAATGAACTTTGTTAAT+GGG | - | chr1_4:19491944-19491963 | Msa0154730:CDS | 20.0% |
| !!! | TGTATAATTTTTTTTAGGTG+GGG | - | chr1_4:19492144-19492163 | Msa0154730:CDS | 20.0% |
| !! | GTATTAAACTTAGAAATTGT+TGG | - | chr1_4:19492177-19492196 | Msa0154730:CDS | 20.0% |
| !! | AATAACTTAAGTTATCTTTG+GGG | - | chr1_4:19492583-19492602 | Msa0154730:intron | 20.0% |
| !!! | TTACGTGTTTGTAATTTTAA+AGG | - | chr1_4:19493505-19493524 | Msa0154730:CDS | 20.0% |
| !!! | GTAAATATTAGATTTGAGAT+AGG | - | chr1_4:19494273-19494292 | Msa0154730:CDS | 20.0% |
| !!! | AGTTACATTGTTTGTTATAT+GGG | - | chr1_4:19494420-19494439 | Msa0154730:CDS | 20.0% |
| !!! | TGTAGTTTTTAATTTTGCTT+AGG | - | chr1_4:19494830-19494849 | Msa0154730:five_prime_UTR | 20.0% |
| !! | AAAAATTAACTCAGAATACA+AGG | + | chr1_4:19494892-19494911 | None:intergenic | 20.0% |
| !! | GAAATTAAGTAATCAAATCA+AGG | + | chr1_4:19494921-19494940 | None:intergenic | 20.0% |
| ! | TTCATAAGCTAGAATTTCAT+AGG | + | chr1_4:19491766-19491785 | None:intergenic | 25.0% |
| !!! | CTTGTTGCTTTATTTTTTTC+AGG | - | chr1_4:19492071-19492090 | Msa0154730:CDS | 25.0% |
| !!! | TTCAGGTACTATTTCTTTTT+TGG | - | chr1_4:19492088-19492107 | Msa0154730:CDS | 25.0% |
| !!! | GTATAATTTTTTTTAGGTGG+GGG | - | chr1_4:19492145-19492164 | Msa0154730:CDS | 25.0% |
| !!! | ATTGCTTTTATAGTACTATG+TGG | - | chr1_4:19492923-19492942 | Msa0154730:intron | 25.0% |
| ! | TACTATTCTGTATACTACTT+TGG | - | chr1_4:19493228-19493247 | Msa0154730:CDS | 25.0% |
| ! | TCCAGATGTTGTAAAAATTA+AGG | - | chr1_4:19493378-19493397 | Msa0154730:CDS | 25.0% |
| ! | CCAGATGTTGTAAAAATTAA+GGG | - | chr1_4:19493379-19493398 | Msa0154730:CDS | 25.0% |
| ! | AAATTACAAACACGTAACAT+TGG | + | chr1_4:19493502-19493521 | None:intergenic | 25.0% |
| ! | CATCATTTATCAAGTTTGAA+AGG | + | chr1_4:19493915-19493934 | None:intergenic | 25.0% |
| ! | AAATGCATGTGTGTTTATAA+GGG | - | chr1_4:19494030-19494049 | Msa0154730:CDS | 25.0% |
| !!! | GAGTTACATTGTTTGTTATA+TGG | - | chr1_4:19494419-19494438 | Msa0154730:CDS | 25.0% |
| ! | GCAAGGAAATATTTGAAAAA+TGG | - | chr1_4:19495483-19495502 | Msa0154730:five_prime_UTR | 25.0% |
| ! | GGAAATATTTGAAAAATGGA+TGG | - | chr1_4:19495487-19495506 | Msa0154730:five_prime_UTR | 25.0% |
| CTCTCTCAAAACTAAAACAA+CGG | - | chr1_4:19491542-19491561 | Msa0154730:three_prime_UTR | 30.0% | |
| ! | TCTTCTTTTCTTCATATACG+TGG | - | chr1_4:19491576-19491595 | Msa0154730:three_prime_UTR | 30.0% |
| !!! | GTGTTTTTTTGATATGGCAA+AGG | + | chr1_4:19491624-19491643 | None:intergenic | 30.0% |
| !!! | GTTTTGAGAATGTTAAGGTT+TGG | + | chr1_4:19491666-19491685 | None:intergenic | 30.0% |
| ! | TGAAGAGAAAATGAAAGTGT+TGG | + | chr1_4:19491691-19491710 | None:intergenic | 30.0% |
| TGATTTGATGCTAAAGAAAG+TGG | - | chr1_4:19491973-19491992 | Msa0154730:CDS | 30.0% | |
| ACTTAGAAATTGTTGGACTT+TGG | - | chr1_4:19492184-19492203 | Msa0154730:CDS | 30.0% | |
| CATCAGGTTTAGTATTATCT+TGG | - | chr1_4:19492239-19492258 | Msa0154730:CDS | 30.0% | |
| TTCTATGGTATATGTGTTGA+TGG | - | chr1_4:19492283-19492302 | Msa0154730:CDS | 30.0% | |
| !!! | TTTGTTTTTGAACTGTTGAC+AGG | - | chr1_4:19492514-19492533 | Msa0154730:intron | 30.0% |
| !!! | TTGTTTTTGAACTGTTGACA+GGG | - | chr1_4:19492515-19492534 | Msa0154730:intron | 30.0% |
| ATAATCAATTTCTACCAGTC+TGG | + | chr1_4:19492541-19492560 | None:intergenic | 30.0% | |
| TCATCATCACAATTACATCT+GGG | + | chr1_4:19492755-19492774 | None:intergenic | 30.0% | |
| TAAAAGCAATGAACTGAACA+AGG | + | chr1_4:19492913-19492932 | None:intergenic | 30.0% | |
| !! | TGGTCTTATTATGAAGCAAA+AGG | - | chr1_4:19493147-19493166 | Msa0154730:CDS | 30.0% |
| TCTTATTATGAAGCAAAAGG+AGG | - | chr1_4:19493150-19493169 | Msa0154730:CDS | 30.0% | |
| TATTCTGTATACTACTTTGG+TGG | - | chr1_4:19493231-19493250 | Msa0154730:CDS | 30.0% | |
| ! | ATCACTGTCTTTTCTTCATT+TGG | + | chr1_4:19493301-19493320 | None:intergenic | 30.0% |
| ! | CCCTTAATTTTTACAACATC+TGG | + | chr1_4:19493382-19493401 | None:intergenic | 30.0% |
| GTAAAAATTAAGGGAAGCAA+TGG | - | chr1_4:19493388-19493407 | Msa0154730:CDS | 30.0% | |
| !! | CGTGTTTGTAATTTTAAAGG+AGG | - | chr1_4:19493508-19493527 | Msa0154730:CDS | 30.0% |
| AAACTTGATAAATGATGCCA+TGG | - | chr1_4:19493918-19493937 | Msa0154730:CDS | 30.0% | |
| CTTATAAACACACATGCATT+TGG | + | chr1_4:19494031-19494050 | None:intergenic | 30.0% | |
| CAAATGCATGTGTGTTTATA+AGG | - | chr1_4:19494029-19494048 | Msa0154730:CDS | 30.0% | |
| TCTTTACCAAACCATGTTAT+GGG | - | chr1_4:19494081-19494100 | Msa0154730:CDS | 30.0% | |
| !!! | TTTTCAGGTGATTTTGCATA+TGG | - | chr1_4:19494119-19494138 | Msa0154730:CDS | 30.0% |
| ATATACCAGTGATAGATATG+AGG | - | chr1_4:19494356-19494375 | Msa0154730:CDS | 30.0% | |
| TATACCAGTGATAGATATGA+GGG | - | chr1_4:19494357-19494376 | Msa0154730:CDS | 30.0% | |
| !! | TTGTTTGTTATATGGGTTCA+TGG | - | chr1_4:19494427-19494446 | Msa0154730:CDS | 30.0% |
| ATGTCACACAAACAATGAAA+AGG | + | chr1_4:19494548-19494567 | None:intergenic | 30.0% | |
| GTGACATAAATAGCTGAATT+TGG | - | chr1_4:19494561-19494580 | Msa0154730:CDS | 30.0% | |
| AACATATTCCACAGTATTCA+AGG | + | chr1_4:19494629-19494648 | None:intergenic | 30.0% | |
| TAATGCGTGTTCGATATATT+TGG | - | chr1_4:19494786-19494805 | Msa0154730:five_prime_UTR | 30.0% | |
| TTCTTCTTCGGTTTCAATTA+CGG | - | chr1_4:19495023-19495042 | Msa0154730:intron | 30.0% | |
| TATTCCAATTCAATGTTGAG+AGG | - | chr1_4:19495097-19495116 | Msa0154730:intron | 30.0% | |
| ! | TTCCATTCAAGTCATTCTTT+TGG | - | chr1_4:19495255-19495274 | Msa0154730:intron | 30.0% |
| ATCCAAAAGAATGACTTGAA+TGG | + | chr1_4:19495260-19495279 | None:intergenic | 30.0% | |
| TTATAGAACACAGTTCTCTT+TGG | - | chr1_4:19495588-19495607 | Msa0154730:five_prime_UTR | 30.0% | |
| !!! | TGGTGGTTTTGAGAATGTTA+AGG | + | chr1_4:19491671-19491690 | None:intergenic | 35.0% |
| !! | AGAGAAAATGAAAGTGTTGG+TGG | + | chr1_4:19491688-19491707 | None:intergenic | 35.0% |
| ! | TCTCTTTTCCAATGACAAGA+AGG | - | chr1_4:19491889-19491908 | Msa0154730:three_prime_UTR | 35.0% |
| ! | TTTTCCAATGACAAGAAGGT+GGG | - | chr1_4:19491893-19491912 | Msa0154730:exon | 35.0% |
| ! | GATCTTAACAAAGCTTTGTC+AGG | + | chr1_4:19492034-19492053 | None:intergenic | 35.0% |
| ! | GCTTTGTTAAGATCTGATCA+AGG | - | chr1_4:19492040-19492059 | Msa0154730:CDS | 35.0% |
| TTGTTAAGATCTGATCAAGG+TGG | - | chr1_4:19492043-19492062 | Msa0154730:CDS | 35.0% | |
| !!! | TTTTTTTAGGTGGGGGATTA+AGG | - | chr1_4:19492152-19492171 | Msa0154730:CDS | 35.0% |
| !!! | TTTTTTAGGTGGGGGATTAA+GGG | - | chr1_4:19492153-19492172 | Msa0154730:CDS | 35.0% |
| ! | TATGGTATATGTGTTGATGG+TGG | - | chr1_4:19492286-19492305 | Msa0154730:CDS | 35.0% |
| GTTATATCCTCTGTATCAGT+TGG | - | chr1_4:19492308-19492327 | Msa0154730:CDS | 35.0% | |
| TTTATTCCAGTCTATACCCT+AGG | - | chr1_4:19492349-19492368 | Msa0154730:CDS | 35.0% | |
| TTTCAGTCAACATAGACCTA+GGG | + | chr1_4:19492368-19492387 | None:intergenic | 35.0% | |
| ! | TTATCTTTGGGGAATGACTA+TGG | - | chr1_4:19492594-19492613 | Msa0154730:intron | 35.0% |
| CTGATTCTTCAATCCATCTA+AGG | + | chr1_4:19492639-19492658 | None:intergenic | 35.0% | |
| TTGAAGAATCAGCAGCATAT+TGG | - | chr1_4:19492647-19492666 | Msa0154730:intron | 35.0% | |
| CTCATCATCACAATTACATC+TGG | + | chr1_4:19492756-19492775 | None:intergenic | 35.0% | |
| !!! | GTGGACTATTGAGAGTATTT+TGG | - | chr1_4:19492784-19492803 | Msa0154730:intron | 35.0% |
| !!! | ATTTTGGAGTGTCAAAGAGT+TGG | - | chr1_4:19492800-19492819 | Msa0154730:intron | 35.0% |
| CGAAATAAAGCAACTCAAGA+GGG | + | chr1_4:19492859-19492878 | None:intergenic | 35.0% | |
| ACGAAATAAAGCAACTCAAG+AGG | + | chr1_4:19492860-19492879 | None:intergenic | 35.0% | |
| ! | GGATTGACACATTTTCTGAA+TGG | - | chr1_4:19492944-19492963 | Msa0154730:intron | 35.0% |
| ! | TGACACATTTTCTGAATGGT+TGG | - | chr1_4:19492948-19492967 | Msa0154730:intron | 35.0% |
| TTTCTGAATGGTTGGACTTA+TGG | - | chr1_4:19492956-19492975 | Msa0154730:intron | 35.0% | |
| TCATGCTCAAGAAAAAGACA+TGG | - | chr1_4:19493107-19493126 | Msa0154730:CDS | 35.0% | |
| CATGCTCAAGAAAAAGACAT+GGG | - | chr1_4:19493108-19493127 | Msa0154730:CDS | 35.0% | |
| AAGAAAAAGACATGGGATCT+TGG | - | chr1_4:19493115-19493134 | Msa0154730:CDS | 35.0% | |
| GAATGCTTACTCAAGAGATT+CGG | - | chr1_4:19493188-19493207 | Msa0154730:CDS | 35.0% | |
| CAGAATAGTATGTCTATCGA+GGG | + | chr1_4:19493218-19493237 | None:intergenic | 35.0% | |
| ACAGAATAGTATGTCTATCG+AGG | + | chr1_4:19493219-19493238 | None:intergenic | 35.0% | |
| ACAACATCTGGATCAGTAAT+CGG | + | chr1_4:19493370-19493389 | None:intergenic | 35.0% | |
| !! | CATATTGGTCTTGATTCTTC+CGG | - | chr1_4:19493561-19493580 | Msa0154730:CDS | 35.0% |
| TCAACTTATGAGAGAGAAGT+TGG | - | chr1_4:19493687-19493706 | Msa0154730:CDS | 35.0% | |
| TTTCAGAAAGTCATGAGTGA+TGG | - | chr1_4:19493778-19493797 | Msa0154730:CDS | 35.0% | |
| GAATGAACAGAAGCTTATTG+TGG | - | chr1_4:19493864-19493883 | Msa0154730:CDS | 35.0% | |
| ! | GAAGATTTCCTTTGGAGATA+AGG | - | chr1_4:19493962-19493981 | Msa0154730:CDS | 35.0% |
| !! | CTTTGGAGATAAGGTCTTTT+GGG | - | chr1_4:19493971-19493990 | Msa0154730:CDS | 35.0% |
| ATGTGTGTTTATAAGGGCTT+GGG | - | chr1_4:19494036-19494055 | Msa0154730:CDS | 35.0% | |
| GTCTTTACCAAACCATGTTA+TGG | - | chr1_4:19494080-19494099 | Msa0154730:CDS | 35.0% | |
| ! | AGGTGATTTTGCATATGGTT+GGG | - | chr1_4:19494124-19494143 | Msa0154730:CDS | 35.0% |
| AATCTACTGGATTGTAACCA+TGG | - | chr1_4:19494147-19494166 | Msa0154730:CDS | 35.0% | |
| ATCTACTGGATTGTAACCAT+GGG | - | chr1_4:19494148-19494167 | Msa0154730:CDS | 35.0% | |
| !! | GATCCTAGTATTTCGAGTTT+CGG | - | chr1_4:19494179-19494198 | Msa0154730:CDS | 35.0% |
| !! | AACAGTAGTGATTCTGAAGT+TGG | - | chr1_4:19494300-19494319 | Msa0154730:CDS | 35.0% |
| ! | TGAGCTTTAGTATTTGCAAG+AGG | - | chr1_4:19494385-19494404 | Msa0154730:CDS | 35.0% |
| AACAAACAATGTAACTCACC+TGG | + | chr1_4:19494416-19494435 | None:intergenic | 35.0% | |
| ACATCTTGCGAAACTGAATT+TGG | - | chr1_4:19494505-19494524 | Msa0154730:CDS | 35.0% | |
| ! | TGTGTTTTCCTTGAATACTG+TGG | - | chr1_4:19494618-19494637 | Msa0154730:CDS | 35.0% |
| AGGATTCTAACTAACATCAC+AGG | + | chr1_4:19494697-19494716 | None:intergenic | 35.0% | |
| ! | TGCTCTTATGATGGGAAAAT+AGG | + | chr1_4:19494717-19494736 | None:intergenic | 35.0% |
| ! | TCCAGATTTGCTCTTATGAT+GGG | + | chr1_4:19494725-19494744 | None:intergenic | 35.0% |
| ! | TTCCAGATTTGCTCTTATGA+TGG | + | chr1_4:19494726-19494745 | None:intergenic | 35.0% |
| ! | CATAAGAGCAAATCTGGAAT+CGG | - | chr1_4:19494727-19494746 | Msa0154730:exon | 35.0% |
| ! | ATCTGGAATCGGAATGTTAT+TGG | - | chr1_4:19494738-19494757 | Msa0154730:five_prime_UTR | 35.0% |
| !! | GTTATTGGTGTTGTATCTCT+AGG | - | chr1_4:19494753-19494772 | Msa0154730:five_prime_UTR | 35.0% |
| ! | TGTTAATTGCAGTTGATGCA+AGG | - | chr1_4:19494950-19494969 | Msa0154730:intron | 35.0% |
| ! | AGTTGATGCAAGGAAACTTA+TGG | - | chr1_4:19494960-19494979 | Msa0154730:intron | 35.0% |
| AAAGCATGACACTTCTTCTT+CGG | - | chr1_4:19495011-19495030 | Msa0154730:intron | 35.0% | |
| CAAAAACTGCTTCAGAAACT+AGG | - | chr1_4:19495169-19495188 | Msa0154730:intron | 35.0% | |
| TTTGAATGCCTTACTGTCAT+TGG | - | chr1_4:19495220-19495239 | Msa0154730:intron | 35.0% | |
| ATCCATCTATATCAGGCATT+TGG | + | chr1_4:19495285-19495304 | None:intergenic | 35.0% | |
| ACTTCGAATCCATCTATATC+AGG | + | chr1_4:19495292-19495311 | None:intergenic | 35.0% | |
| TTTAAACTTCCGAATCCTTG+CGG | + | chr1_4:19495317-19495336 | None:intergenic | 35.0% | |
| AGGATTCGGAAGTTTAAAAG+CGG | - | chr1_4:19495319-19495338 | Msa0154730:five_prime_UTR | 35.0% | |
| GGAAGTTTAAAAGCGGAAAT+AGG | - | chr1_4:19495326-19495345 | Msa0154730:five_prime_UTR | 35.0% | |
| AAGTGCAGAAGAAGATTTGT+GGG | - | chr1_4:19495372-19495391 | Msa0154730:five_prime_UTR | 35.0% | |
| !! | TGTATGCAGATTGGTGTTAA+TGG | - | chr1_4:19495400-19495419 | Msa0154730:five_prime_UTR | 35.0% |
| TAATGGAGTAATCCGAAAAC+CGG | - | chr1_4:19495417-19495436 | Msa0154730:five_prime_UTR | 35.0% | |
| CTCAAAAGAATTCTGATGCA+AGG | - | chr1_4:19495466-19495485 | Msa0154730:five_prime_UTR | 35.0% | |
| TGAAGTCTCATTCTTGTTCT+TGG | - | chr1_4:19495558-19495577 | Msa0154730:five_prime_UTR | 35.0% | |
| TTATGTATGACATCTCTACG+TGG | + | chr1_4:19495635-19495654 | None:intergenic | 35.0% | |
| TTACTGTGGAAGAGATTCTG+CGG | + | chr1_4:19491824-19491843 | None:intergenic | 40.0% | |
| ! | CTTTTCCAATGACAAGAAGG+TGG | - | chr1_4:19491892-19491911 | Msa0154730:three_prime_UTR | 40.0% |
| !! | TCTTGGATTTGGCTTTCATC+AGG | - | chr1_4:19492223-19492242 | Msa0154730:CDS | 40.0% |
| GTTTCAGTCAACATAGACCT+AGG | + | chr1_4:19492369-19492388 | None:intergenic | 40.0% | |
| ! | GGTCTATGTTGACTGAAACT+AGG | - | chr1_4:19492370-19492389 | Msa0154730:CDS | 40.0% |
| TCAGCAGCATATTGGATCAA+TGG | - | chr1_4:19492655-19492674 | Msa0154730:intron | 40.0% | |
| AGATACACACAAGAGGATAG+AGG | + | chr1_4:19492711-19492730 | None:intergenic | 40.0% | |
| TTGTTGCAGATACACACAAG+AGG | + | chr1_4:19492718-19492737 | None:intergenic | 40.0% | |
| ! | GTGATGATGAGAACAGTTTG+TGG | - | chr1_4:19492765-19492784 | Msa0154730:intron | 40.0% |
| TGGTGATTTCTTGATTGCTG+TGG | - | chr1_4:19492820-19492839 | Msa0154730:intron | 40.0% | |
| GAACAAGGACCCATTTGAAA+GGG | + | chr1_4:19492898-19492917 | None:intergenic | 40.0% | |
| TGAACAAGGACCCATTTGAA+AGG | + | chr1_4:19492899-19492918 | None:intergenic | 40.0% | |
| ! | TCCTCACACTTTTCAGCTTA+TGG | - | chr1_4:19492979-19492998 | Msa0154730:intron | 40.0% |
| ! | ACCATAAGCTGAAAAGTGTG+AGG | + | chr1_4:19492983-19493002 | None:intergenic | 40.0% |
| ! | TCACACTTTTCAGCTTATGG+TGG | - | chr1_4:19492982-19493001 | Msa0154730:intron | 40.0% |
| GGCAGTGAGAATCTTAAAGA+TGG | + | chr1_4:19493014-19493033 | None:intergenic | 40.0% | |
| !! | CTTTAAGATTCTCACTGCCT+TGG | - | chr1_4:19493015-19493034 | Msa0154730:CDS | 40.0% |
| TCCTTTGCTTCTCAAAGTGA+AGG | - | chr1_4:19493075-19493094 | Msa0154730:CDS | 40.0% | |
| ! | ACCTTCACTTTGAGAAGCAA+AGG | + | chr1_4:19493079-19493098 | None:intergenic | 40.0% |
| AAAAGACATGGGATCTTGGA+CGG | - | chr1_4:19493119-19493138 | Msa0154730:CDS | 40.0% | |
| GTGGAGCTTTCGAAAACATT+AGG | - | chr1_4:19493250-19493269 | Msa0154730:CDS | 40.0% | |
| GTTTGCAAAATTGTGCTGTG+TGG | - | chr1_4:19493272-19493291 | Msa0154730:CDS | 40.0% | |
| TCACTCATGAATTGAACGCA+AGG | - | chr1_4:19493326-19493345 | Msa0154730:CDS | 40.0% | |
| ACGTAACATTGGCATTCGAA+TGG | + | chr1_4:19493491-19493510 | None:intergenic | 40.0% | |
| !! | TCAGGCTTGTTATGCCATAT+TGG | - | chr1_4:19493546-19493565 | Msa0154730:CDS | 40.0% |
| CGGAAGAATCAAGACCAATA+TGG | + | chr1_4:19493563-19493582 | None:intergenic | 40.0% | |
| TCAGGAGCTGGAGATAATTA+AGG | - | chr1_4:19493609-19493628 | Msa0154730:CDS | 40.0% | |
| AATTAAGGTGGTTGCTGATC+AGG | - | chr1_4:19493624-19493643 | Msa0154730:CDS | 40.0% | |
| ! | TCTGAAATGAGTTTCTTGCC+TGG | + | chr1_4:19493765-19493784 | None:intergenic | 40.0% |
| AAGTCATGAGTGATGGTATG+AGG | - | chr1_4:19493785-19493804 | Msa0154730:CDS | 40.0% | |
| AATCCCAAAATCGAGTGCAT+AGG | + | chr1_4:19493814-19493833 | None:intergenic | 40.0% | |
| !! | GGATGATGGAAGATTTCCTT+TGG | - | chr1_4:19493954-19493973 | Msa0154730:CDS | 40.0% |
| CCAAAAGACCTTATCTCCAA+AGG | + | chr1_4:19493973-19493992 | None:intergenic | 40.0% | |
| !! | CCTTTGGAGATAAGGTCTTT+TGG | - | chr1_4:19493970-19493989 | Msa0154730:CDS | 40.0% |
| AAACACACATGCATTTGGCA+AGG | + | chr1_4:19494026-19494045 | None:intergenic | 40.0% | |
| CATGTGTGTTTATAAGGGCT+TGG | - | chr1_4:19494035-19494054 | Msa0154730:CDS | 40.0% | |
| ! | TTATAAGGGCTTGGGTTTTG+TGG | - | chr1_4:19494044-19494063 | Msa0154730:CDS | 40.0% |
| TCATCACCCATAACATGGTT+TGG | + | chr1_4:19494090-19494109 | None:intergenic | 40.0% | |
| ! | CAGGTGATTTTGCATATGGT+TGG | - | chr1_4:19494123-19494142 | Msa0154730:CDS | 40.0% |
| TCTACTGGATTGTAACCATG+GGG | - | chr1_4:19494149-19494168 | Msa0154730:CDS | 40.0% | |
| AGTCAAGGGAGGAATGAAAA+AGG | - | chr1_4:19494213-19494232 | Msa0154730:CDS | 40.0% | |
| AAGGGAGGAATGAAAAAGGA+TGG | - | chr1_4:19494217-19494236 | Msa0154730:CDS | 40.0% | |
| AGGGAGGAATGAAAAAGGAT+GGG | - | chr1_4:19494218-19494237 | Msa0154730:CDS | 40.0% | |
| TATTTGCAAGAGGATAGTCC+AGG | - | chr1_4:19494395-19494414 | Msa0154730:CDS | 40.0% | |
| TCCCATCATAAGAGCAAATC+TGG | - | chr1_4:19494721-19494740 | Msa0154730:exon | 40.0% | |
| TAACAGTACAACGCATAGCT+TGG | + | chr1_4:19494858-19494877 | None:intergenic | 40.0% | |
| GATGCAAGGAAACTTATGGT+TGG | - | chr1_4:19494964-19494983 | Msa0154730:intron | 40.0% | |
| ! | TGGTTGGTACCATATACTCA+CGG | - | chr1_4:19494980-19494999 | Msa0154730:intron | 40.0% |
| TGAGGAATACCGTGAGTATA+TGG | + | chr1_4:19494992-19495011 | None:intergenic | 40.0% | |
| !! | AGAAGAAGTGTCATGCTTTG+AGG | + | chr1_4:19495010-19495029 | None:intergenic | 40.0% |
| TTCAGAGATGGCTATTGCAA+TGG | + | chr1_4:19495053-19495072 | None:intergenic | 40.0% | |
| CAGACCTCTCAACATTGAAT+TGG | + | chr1_4:19495104-19495123 | None:intergenic | 40.0% | |
| ACTTGAATGGAAGATCCAAC+AGG | + | chr1_4:19495247-19495266 | None:intergenic | 40.0% | |
| CTCCAAATGCCTGATATAGA+TGG | - | chr1_4:19495280-19495299 | Msa0154730:intron | 40.0% | |
| GCAGTCAAGGCAACAATTAT+AGG | + | chr1_4:19495352-19495371 | None:intergenic | 40.0% | |
| CAAGTGCAGAAGAAGATTTG+TGG | - | chr1_4:19495371-19495390 | Msa0154730:five_prime_UTR | 40.0% | |
| TGGGAAAGATGTATGCAGAT+TGG | - | chr1_4:19495391-19495410 | Msa0154730:five_prime_UTR | 40.0% | |
| !! | CTTGCATCAAAACCGGTTTT+CGG | + | chr1_4:19495432-19495451 | None:intergenic | 40.0% |
| GCAATTCCTTGCATCAAAAC+CGG | + | chr1_4:19495439-19495458 | None:intergenic | 40.0% | |
| ! | TACGTGGAAAATTGGTAGCA+AGG | + | chr1_4:19495619-19495638 | None:intergenic | 40.0% |
| GACATCTCTACGTGGAAAAT+TGG | + | chr1_4:19495627-19495646 | None:intergenic | 40.0% | |
| TTTCAATAAAGGGTCGCACC+CGG | - | chr1_4:19491791-19491810 | Msa0154730:three_prime_UTR | 45.0% | |
| GACAGTACCAACTGATACAG+AGG | + | chr1_4:19492318-19492337 | None:intergenic | 45.0% | |
| CATAGACCTAGGGTATAGAC+TGG | + | chr1_4:19492358-19492377 | None:intergenic | 45.0% | |
| CTCAAGAGGGATTGAGAAGT+AGG | + | chr1_4:19492846-19492865 | None:intergenic | 45.0% | |
| CTCGAACGTCCCTTTCAAAT+GGG | - | chr1_4:19492886-19492905 | Msa0154730:intron | 45.0% | |
| TGCTTCTCAAAGTGAAGGTC+AGG | - | chr1_4:19493080-19493099 | Msa0154730:CDS | 45.0% | |
| GCTTCTCAAAGTGAAGGTCA+GGG | - | chr1_4:19493081-19493100 | Msa0154730:CDS | 45.0% | |
| AAAGACATGGGATCTTGGAC+GGG | - | chr1_4:19493120-19493139 | Msa0154730:CDS | 45.0% | |
| GTCACTAGAAACACCAAGAC+TGG | + | chr1_4:19493452-19493471 | None:intergenic | 45.0% | |
| TAACAAGCCTGAGTTAGCTC+AGG | + | chr1_4:19493538-19493557 | None:intergenic | 45.0% | |
| GCTCCAAGATCTAGGTTCTT+CGG | + | chr1_4:19493587-19493606 | None:intergenic | 45.0% | |
| ACCTAGATCTTGGAGCAATC+AGG | - | chr1_4:19493591-19493610 | Msa0154730:CDS | 45.0% | |
| TCCTGATTGCTCCAAGATCT+AGG | + | chr1_4:19493595-19493614 | None:intergenic | 45.0% | |
| GGAGCTGGAGATAATTAAGG+TGG | - | chr1_4:19493612-19493631 | Msa0154730:CDS | 45.0% | |
| TCATGAGTGATGGTATGAGG+AGG | - | chr1_4:19493788-19493807 | Msa0154730:CDS | 45.0% | |
| ! | AGGCCTATGCACTCGATTTT+GGG | - | chr1_4:19493808-19493827 | Msa0154730:CDS | 45.0% |
| ! | GCACGCTGCTTCTTTTATCA+TGG | + | chr1_4:19494004-19494023 | None:intergenic | 45.0% |
| ACCATGTTATGGGTGATGAG+AGG | - | chr1_4:19494091-19494110 | Msa0154730:CDS | 45.0% | |
| TCCTCTCATCACCCATAACA+TGG | + | chr1_4:19494095-19494114 | None:intergenic | 45.0% | |
| ATGTTATGGGTGATGAGAGG+AGG | - | chr1_4:19494094-19494113 | Msa0154730:CDS | 45.0% | |
| TGTTATGGGTGATGAGAGGA+GGG | - | chr1_4:19494095-19494114 | Msa0154730:CDS | 45.0% | |
| ! | TGATGAGAGGAGGGTTTTTC+AGG | - | chr1_4:19494104-19494123 | Msa0154730:CDS | 45.0% |
| GCATATGGTTGGGAATCTAC+TGG | - | chr1_4:19494134-19494153 | Msa0154730:CDS | 45.0% | |
| TGGATTGTAACCATGGGGAA+GGG | - | chr1_4:19494154-19494173 | Msa0154730:CDS | 45.0% | |
| CTGCCGAAACTCGAAATACT+AGG | + | chr1_4:19494185-19494204 | None:intergenic | 45.0% | |
| ATGAAAAAGGATGGGCAACC+TGG | - | chr1_4:19494226-19494245 | Msa0154730:CDS | 45.0% | |
| ACATCACCACTAGATGAGCT+TGG | + | chr1_4:19494255-19494274 | None:intergenic | 45.0% | |
| TCTGCCCTCATATCTATCAC+TGG | + | chr1_4:19494364-19494383 | None:intergenic | 45.0% | |
| GAGATGGCTATTGCAATGGA+AGG | + | chr1_4:19495049-19495068 | None:intergenic | 45.0% | |
| GCATTCAAATCCCGTAGAAG+CGG | + | chr1_4:19495209-19495228 | None:intergenic | 45.0% | |
| CAACAGGTCCAATGACAGTA+AGG | + | chr1_4:19495231-19495250 | None:intergenic | 45.0% | |
| CTTACTGTCATTGGACCTGT+TGG | - | chr1_4:19495229-19495248 | Msa0154730:intron | 45.0% | |
| TTCTTCTGCACTTGCAGTCA+AGG | + | chr1_4:19495365-19495384 | None:intergenic | 45.0% | |
| !! | CGAAAACCGGTTTTGATGCA+AGG | - | chr1_4:19495430-19495449 | Msa0154730:five_prime_UTR | 45.0% |
| !!! | TTTATTGTATAATTTTTTTT+AGG | - | chr1_4:19492139-19492158 | Msa0154730:CDS | 5.0% |
| TGCACCCACCTTCTTGTCAT+TGG | + | chr1_4:19491900-19491919 | None:intergenic | 50.0% | |
| GCTCGAACGTCCCTTTCAAA+TGG | - | chr1_4:19492885-19492904 | Msa0154730:intron | 50.0% | |
| !! | CTTGGTGTTTCTAGTGACGC+AGG | - | chr1_4:19493454-19493473 | Msa0154730:CDS | 50.0% |
| !! | TGTTTCTAGTGACGCAGGAC+CGG | - | chr1_4:19493459-19493478 | Msa0154730:CDS | 50.0% |
| AGGAACACCTGAGCTAACTC+AGG | - | chr1_4:19493528-19493547 | Msa0154730:CDS | 50.0% | |
| CAAGATCTAGGTTCTTCGGC+CGG | + | chr1_4:19493583-19493602 | None:intergenic | 50.0% | |
| ATCTTGGAGCAATCAGGAGC+TGG | - | chr1_4:19493597-19493616 | Msa0154730:CDS | 50.0% | |
| GGCGAGAAGGAATGCTATGA+TGG | - | chr1_4:19493735-19493754 | Msa0154730:CDS | 50.0% | |
| GAATGCTATGATGGCAAGCC+AGG | - | chr1_4:19493744-19493763 | Msa0154730:CDS | 50.0% | |
| ! | GAGGCCTATGCACTCGATTT+TGG | - | chr1_4:19493807-19493826 | Msa0154730:CDS | 50.0% |
| ATCCTTTGCAGAGCTGTCCA+TGG | + | chr1_4:19493938-19493957 | None:intergenic | 50.0% | |
| GACAGCTCTGCAAAGGATGA+TGG | - | chr1_4:19493940-19493959 | Msa0154730:CDS | 50.0% | |
| CTGGATTGTAACCATGGGGA+AGG | - | chr1_4:19494153-19494172 | Msa0154730:CDS | 50.0% | |
| GGATTGTAACCATGGGGAAG+GGG | - | chr1_4:19494155-19494174 | Msa0154730:CDS | 50.0% | |
| GATTGTAACCATGGGGAAGG+GGG | - | chr1_4:19494156-19494175 | Msa0154730:CDS | 50.0% | |
| ATTGTAACCATGGGGAAGGG+GGG | - | chr1_4:19494157-19494176 | Msa0154730:CDS | 50.0% | |
| ACTAGATGAGCTTGGTCTCC+AGG | + | chr1_4:19494247-19494266 | None:intergenic | 50.0% | |
| TGGAGACCAAGCTCATCTAG+TGG | - | chr1_4:19494246-19494265 | Msa0154730:CDS | 50.0% | |
| ACTGGTATATGTCCTACCCC+CGG | + | chr1_4:19494346-19494365 | None:intergenic | 50.0% | |
| GCAATAGCCATCTCTGAACC+CGG | - | chr1_4:19495055-19495074 | Msa0154730:intron | 50.0% | |
| CAATAGCCATCTCTGAACCC+GGG | - | chr1_4:19495056-19495075 | Msa0154730:intron | 50.0% | |
| AATAGCCATCTCTGAACCCG+GGG | - | chr1_4:19495057-19495076 | Msa0154730:intron | 50.0% | |
| !! | TTGCGTTCTGAAGATTCCCC+GGG | + | chr1_4:19495076-19495095 | None:intergenic | 50.0% |
| !! | GTTGCGTTCTGAAGATTCCC+CGG | + | chr1_4:19495077-19495096 | None:intergenic | 50.0% |
| GAGAGGTCTGCAAGTTCTGT+TGG | - | chr1_4:19495114-19495133 | Msa0154730:intron | 50.0% | |
| TTCCGTGACTTCCGCTTCTA+CGG | - | chr1_4:19495195-19495214 | Msa0154730:intron | 50.0% | |
| AGATTCTGCGGCACGAAACC+GGG | + | chr1_4:19491812-19491831 | None:intergenic | 55.0% | |
| GAGATTCTGCGGCACGAAAC+CGG | + | chr1_4:19491813-19491832 | None:intergenic | 55.0% | |
| AACTGTTGACAGGGCCAGAC+TGG | - | chr1_4:19492524-19492543 | Msa0154730:intron | 55.0% | |
| CGCAGTTGCACAAGACACCA+AGG | + | chr1_4:19493035-19493054 | None:intergenic | 55.0% | |
| !! | GCGCTTGCTGTTTCCAGTCT+TGG | - | chr1_4:19493436-19493455 | Msa0154730:CDS | 55.0% |
| GGCATTCGAATGGCAGCAAC+CGG | + | chr1_4:19493481-19493500 | None:intergenic | 55.0% | |
| CGGCCGAAGAACCTAGATCT+TGG | - | chr1_4:19493581-19493600 | Msa0154730:CDS | 55.0% | |
| TGCAGCATGCGATAGAGCCA+CGG | + | chr1_4:19493653-19493672 | None:intergenic | 55.0% | |
| GCGCAATCGAGCTTTGCAAC+TGG | - | chr1_4:19493714-19493733 | Msa0154730:CDS | 55.0% | |
| GAGCTTTGCAACTGGCGAGA+AGG | - | chr1_4:19493722-19493741 | Msa0154730:CDS | 55.0% | |
| TGCCATGGACAGCTCTGCAA+AGG | - | chr1_4:19493933-19493952 | Msa0154730:CDS | 55.0% | |
| !! | GGGCTTGGGTTTTGTGGTTG+AGG | - | chr1_4:19494050-19494069 | Msa0154730:CDS | 55.0% |
| !! | TTTCGAGTTTCGGCAGACGC+TGG | - | chr1_4:19494189-19494208 | Msa0154730:CDS | 55.0% |
| CTGGTATATGTCCTACCCCC+GGG | + | chr1_4:19494345-19494364 | None:intergenic | 55.0% | |
| AGATTCCCCGGGTTCAGAGA+TGG | + | chr1_4:19495065-19495084 | None:intergenic | 55.0% | |
| TCCGTGACTTCCGCTTCTAC+GGG | - | chr1_4:19495196-19495215 | Msa0154730:intron | 55.0% | |
| TCCCGTAGAAGCGGAAGTCA+CGG | + | chr1_4:19495200-19495219 | None:intergenic | 55.0% | |
| ATGGATTCGAAGTCGCCGCA+AGG | - | chr1_4:19495299-19495318 | Msa0154730:intron | 55.0% | |
| TCGAAGTCGCCGCAAGGATT+CGG | - | chr1_4:19495305-19495324 | Msa0154730:intron | 55.0% | |
| GACATGGGATCTTGGACGGG+AGG | - | chr1_4:19493123-19493142 | Msa0154730:CDS | 60.0% | |
| TGGGATCTTGGACGGGAGGT+TGG | - | chr1_4:19493127-19493146 | Msa0154730:CDS | 60.0% | |
| ! | GGTTGCTGATCAGGTTGCCG+TGG | - | chr1_4:19493633-19493652 | Msa0154730:CDS | 60.0% |
| TCGGCAGACGCTGGAAGTCA+AGG | - | chr1_4:19494198-19494217 | Msa0154730:CDS | 60.0% | |
| CGGCAGACGCTGGAAGTCAA+GGG | - | chr1_4:19494199-19494218 | Msa0154730:CDS | 60.0% | |
| CAGACGCTGGAAGTCAAGGG+AGG | - | chr1_4:19494202-19494221 | Msa0154730:CDS | 60.0% | |
| GTTGGCAGCTCAGTGTCCTC+AGG | - | chr1_4:19494318-19494337 | Msa0154730:CDS | 60.0% | |
| AGCTCAGTGTCCTCAGGTCC+CGG | - | chr1_4:19494324-19494343 | Msa0154730:CDS | 60.0% | |
| CTAGGATCCCCCCTTCCCCA+TGG | + | chr1_4:19494167-19494186 | None:intergenic | 65.0% | |
| GCTCAGTGTCCTCAGGTCCC+GGG | - | chr1_4:19494325-19494344 | Msa0154730:CDS | 65.0% | |
| CTCAGTGTCCTCAGGTCCCG+GGG | - | chr1_4:19494326-19494345 | Msa0154730:CDS | 65.0% | |
| TCAGTGTCCTCAGGTCCCGG+GGG | - | chr1_4:19494327-19494346 | Msa0154730:CDS | 65.0% | |
| TGTCCTCAGGTCCCGGGGGT+AGG | - | chr1_4:19494331-19494350 | Msa0154730:CDS | 70.0% | |
| TGTCCTACCCCCGGGACCTG+AGG | + | chr1_4:19494337-19494356 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 19491527 | 19495883 | 19491527 | ID=Msa0154730;Name=Msa0154730 |
| chr1_4 | mRNA | 19491527 | 19495883 | 19491527 | ID=Msa0154730-mRNA-1;Parent=Msa0154730;Name=Msa0154730-mRNA-1;_AED=0.07;_eAED=0.07;_QI=704|1|1|1|0.5|0.33|3|385|759 |
| chr1_4 | exon | 19491527 | 19492448 | 19491527 | ID=Msa0154730-mRNA-1:exon:7189;Parent=Msa0154730-mRNA-1 |
| chr1_4 | exon | 19492994 | 19494874 | 19492994 | ID=Msa0154730-mRNA-1:exon:7188;Parent=Msa0154730-mRNA-1 |
| chr1_4 | exon | 19495318 | 19495883 | 19495318 | ID=Msa0154730-mRNA-1:exon:7187;Parent=Msa0154730-mRNA-1 |
| chr1_4 | five_prime_UTR | 19495318 | 19495883 | 19495318 | ID=Msa0154730-mRNA-1:five_prime_utr;Parent=Msa0154730-mRNA-1 |
| chr1_4 | five_prime_UTR | 19494737 | 19494874 | 19494737 | ID=Msa0154730-mRNA-1:five_prime_utr;Parent=Msa0154730-mRNA-1 |
| chr1_4 | CDS | 19492994 | 19494736 | 19492994 | ID=Msa0154730-mRNA-1:cds;Parent=Msa0154730-mRNA-1 |
| chr1_4 | CDS | 19491912 | 19492448 | 19491912 | ID=Msa0154730-mRNA-1:cds;Parent=Msa0154730-mRNA-1 |
| chr1_4 | three_prime_UTR | 19491527 | 19491911 | 19491527 | ID=Msa0154730-mRNA-1:three_prime_utr;Parent=Msa0154730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
