Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0029700 | XP_013468658.1 | 98.419 | 759 | 12 | 0 | 1 | 759 | 1 | 759 | 0.0 | 1540 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0029700 | sp|Q0WPQ2|ETR2_ARATH | 59.847 | 782 | 278 | 13 | 1 | 758 | 1 | 770 | 0.0 | 885 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0029700 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012020 | Msa0029700 | -0.801010 | 1.101790e-48 | -8.615850e-47 |
| Msa0021400 | Msa0029700 | 0.871901 | 4.799012e-67 | -8.615850e-47 |
| Msa0024950 | Msa0029700 | 0.803591 | 3.239711e-49 | -8.615850e-47 |
| Msa0029700 | Msa0039590 | -0.800152 | 1.648208e-48 | -8.615850e-47 |
| Msa0029700 | Msa0054860 | 0.801640 | 8.186415e-49 | -8.615850e-47 |
| Msa0029700 | Msa0064960 | 0.891937 | 2.516949e-74 | -8.615850e-47 |
| Msa0029700 | Msa0072440 | 0.832004 | 1.210749e-55 | -8.615850e-47 |
| Msa0029700 | Msa0080020 | 0.992888 | 4.458625e-196 | -8.615850e-47 |
| Msa0029700 | Msa0100200 | 0.800856 | 1.184598e-48 | -8.615850e-47 |
| Msa0029700 | Msa0110240 | 0.913031 | 9.849277e-84 | -8.615850e-47 |
| Msa0029700 | Msa0120860 | 0.849184 | 3.805995e-60 | -8.615850e-47 |
| Msa0029700 | Msa0124960 | 0.993166 | 6.838471e-198 | -8.615850e-47 |
| Msa0029700 | Msa0132080 | -0.815809 | 7.640976e-52 | -8.615850e-47 |
| Msa0029700 | Msa0138340 | -0.811626 | 6.373820e-51 | -8.615850e-47 |
| Msa0029700 | Msa0147960 | -0.808921 | 2.441439e-50 | -8.615850e-47 |
| Msa0029700 | Msa0154710 | -0.802846 | 4.621992e-49 | -8.615850e-47 |
| Msa0029700 | Msa0154730 | 0.990254 | 9.019699e-182 | -8.615850e-47 |
| Msa0029700 | Msa0156530 | 0.873079 | 1.940530e-67 | -8.615850e-47 |
| Msa0029700 | Msa0186200 | 0.816713 | 4.799199e-52 | -8.615850e-47 |
| Msa0029700 | Msa0186400 | -0.801245 | 9.860081e-49 | -8.615850e-47 |
| Msa0029700 | Msa0189150 | -0.808258 | 3.383670e-50 | -8.615850e-47 |
| Msa0029700 | Msa0191260 | 0.812636 | 3.836386e-51 | -8.615850e-47 |
| Msa0029700 | Msa0197170 | 0.817233 | 3.666331e-52 | -8.615850e-47 |
| Msa0029700 | Msa0207150 | -0.801135 | 1.038669e-48 | -8.615850e-47 |
| Msa0029700 | Msa0208040 | -0.800368 | 1.489642e-48 | -8.615850e-47 |
| Msa0029700 | Msa0209370 | -0.809252 | 2.074419e-50 | -8.615850e-47 |
| Msa0029700 | Msa0220160 | 0.804357 | 2.246103e-49 | -8.615850e-47 |
| Msa0029700 | Msa0220170 | 0.806048 | 9.940868e-50 | -8.615850e-47 |
| Msa0029700 | Msa0223590 | 0.804717 | 1.889159e-49 | -8.615850e-47 |
| Msa0029700 | Msa0225070 | -0.816707 | 4.812378e-52 | -8.615850e-47 |
| Msa0029700 | Msa0227790 | 0.818416 | 1.983225e-52 | -8.615850e-47 |
| Msa0029700 | Msa0238140 | 0.841667 | 4.135207e-58 | -8.615850e-47 |
| Msa0029700 | Msa0238950 | 0.816300 | 5.936748e-52 | -8.615850e-47 |
| Msa0029700 | Msa0258910 | 0.802013 | 6.860969e-49 | -8.615850e-47 |
| Msa0029700 | Msa0264890 | 0.809508 | 1.827575e-50 | -8.615850e-47 |
| Msa0029700 | Msa0266140 | -0.810171 | 1.316212e-50 | -8.615850e-47 |
| Msa0029700 | Msa0270730 | -0.814262 | 1.685335e-51 | -8.615850e-47 |
| Msa0029700 | Msa0304060 | -0.818804 | 1.618653e-52 | -8.615850e-47 |
| Msa0029700 | Msa0305630 | -0.807914 | 4.004947e-50 | -8.615850e-47 |
| Msa0029700 | Msa0308750 | 0.827254 | 1.731230e-54 | -8.615850e-47 |
| Msa0029700 | Msa0309490 | -0.816686 | 4.866799e-52 | -8.615850e-47 |
| Msa0029700 | Msa0311130 | -0.812046 | 5.163073e-51 | -8.615850e-47 |
| Msa0029700 | Msa0311900 | 0.808080 | 3.692569e-50 | -8.615850e-47 |
| Msa0029700 | Msa0316140 | 0.809657 | 1.697944e-50 | -8.615850e-47 |
| Msa0029700 | Msa0316740 | 0.829510 | 4.945062e-55 | -8.615850e-47 |
| Msa0029700 | Msa0340270 | 0.811339 | 7.356431e-51 | -8.615850e-47 |
| Msa0029700 | Msa0364030 | -0.807017 | 6.206189e-50 | -8.615850e-47 |
| Msa0029700 | Msa0367590 | -0.803578 | 3.260330e-49 | -8.615850e-47 |
| Msa0029700 | Msa0368620 | 0.805666 | 1.195765e-49 | -8.615850e-47 |
| Msa0029700 | Msa0372100 | 0.822563 | 2.215925e-53 | -8.615850e-47 |
| Msa0029700 | Msa0382020 | -0.808426 | 3.115156e-50 | -8.615850e-47 |
| Msa0029700 | Msa0383460 | 0.848246 | 6.924287e-60 | -8.615850e-47 |
| Msa0029700 | Msa0383930 | 0.833287 | 5.816048e-56 | -8.615850e-47 |
| Msa0029700 | Msa0384590 | 0.831894 | 1.288238e-55 | -8.615850e-47 |
| Msa0029700 | Msa0396330 | -0.809258 | 2.068338e-50 | -8.615850e-47 |
| Msa0029700 | Msa0403740 | -0.807793 | 4.249678e-50 | -8.615850e-47 |
| Msa0029700 | Msa0416040 | 0.803900 | 2.795410e-49 | -8.615850e-47 |
| Msa0029700 | Msa0427260 | -0.833526 | 5.070548e-56 | -8.615850e-47 |
| Msa0029700 | Msa0428720 | -0.812022 | 5.224046e-51 | -8.615850e-47 |
| Msa0029700 | Msa0434140 | 0.857822 | 1.255714e-62 | -8.615850e-47 |
| Msa0029700 | Msa0434370 | 0.854164 | 1.477255e-61 | -8.615850e-47 |
| Msa0029700 | Msa0434660 | 0.817302 | 3.538030e-52 | -8.615850e-47 |
| Msa0029700 | Msa0456450 | -0.808431 | 3.108115e-50 | -8.615850e-47 |
| Msa0029700 | Msa0465420 | 0.807855 | 4.122483e-50 | -8.615850e-47 |
| Msa0029700 | Msa0477390 | 0.841112 | 5.790459e-58 | -8.615850e-47 |
| Msa0029700 | Msa0477660 | 0.822379 | 2.445019e-53 | -8.615850e-47 |
| Msa0029700 | Msa0478130 | 0.838500 | 2.771971e-57 | -8.615850e-47 |
| Msa0029700 | Msa0478190 | 0.854344 | 1.310521e-61 | -8.615850e-47 |
| Msa0029700 | Msa0480260 | 0.801110 | 1.051063e-48 | -8.615850e-47 |
| Msa0029700 | Msa0511280 | 0.803673 | 3.115291e-49 | -8.615850e-47 |
| Msa0029700 | Msa0511380 | 0.850780 | 1.360763e-60 | -8.615850e-47 |
| Msa0029700 | Msa0514540 | 0.821807 | 3.317657e-53 | -8.615850e-47 |
| Msa0029700 | Msa0521720 | 0.824783 | 6.693894e-54 | -8.615850e-47 |
| Msa0029700 | Msa0522280 | 0.807381 | 5.197475e-50 | -8.615850e-47 |
| Msa0029700 | Msa0522540 | 0.825016 | 5.897389e-54 | -8.615850e-47 |
| Msa0029700 | Msa0527210 | -0.804352 | 2.250973e-49 | -8.615850e-47 |
| Msa0029700 | Msa0528830 | -0.800950 | 1.132908e-48 | -8.615850e-47 |
| Msa0029700 | Msa0538050 | -0.837239 | 5.844460e-57 | -8.615850e-47 |
| Msa0029700 | Msa0548420 | 0.814065 | 1.862576e-51 | -8.615850e-47 |
| Msa0029700 | Msa0566460 | 0.803689 | 3.092475e-49 | -8.615850e-47 |
| Msa0029700 | Msa0568300 | -0.804241 | 2.373842e-49 | -8.615850e-47 |
| Msa0029700 | Msa0569980 | -0.830800 | 2.395265e-55 | -8.615850e-47 |
| Msa0029700 | Msa0570600 | 0.809900 | 1.505388e-50 | -8.615850e-47 |
| Msa0029700 | Msa0572730 | -0.813226 | 2.848840e-51 | -8.615850e-47 |
| Msa0029700 | Msa0575950 | 0.826986 | 2.007370e-54 | -8.615850e-47 |
| Msa0029700 | Msa0576500 | -0.801855 | 7.393232e-49 | -8.615850e-47 |
| Msa0029700 | Msa0585720 | -0.835825 | 1.339381e-56 | -8.615850e-47 |
| Msa0029700 | Msa0612880 | -0.828222 | 1.013647e-54 | -8.615850e-47 |
| Msa0029700 | Msa0615780 | 0.831715 | 1.426407e-55 | -8.615850e-47 |
| Msa0029700 | Msa0619390 | -0.801049 | 1.081725e-48 | -8.615850e-47 |
| Msa0029700 | Msa0619690 | -0.811614 | 6.410093e-51 | -8.615850e-47 |
| Msa0029700 | Msa0625900 | -0.829789 | 4.227909e-55 | -8.615850e-47 |
| Msa0029700 | Msa0655200 | 0.825675 | 4.119399e-54 | -8.615850e-47 |
| Msa0029700 | Msa0658120 | 0.804735 | 1.872558e-49 | -8.615850e-47 |
| Msa0029700 | Msa0663580 | -0.827175 | 1.808957e-54 | -8.615850e-47 |
| Msa0029700 | Msa0663690 | -0.825197 | 5.343802e-54 | -8.615850e-47 |
| Msa0029700 | Msa0671300 | -0.801442 | 8.988780e-49 | -8.615850e-47 |
| Msa0029700 | Msa0688610 | 0.824967 | 6.057556e-54 | -8.615850e-47 |
| Msa0029700 | Msa0695140 | 0.841502 | 4.569783e-58 | -8.615850e-47 |
| Msa0029700 | Msa0700410 | 0.800750 | 1.244757e-48 | -8.615850e-47 |
| Msa0029700 | Msa0705520 | 0.821129 | 4.756963e-53 | -8.615850e-47 |
| Msa0029700 | Msa0706130 | -0.832864 | 7.411791e-56 | -8.615850e-47 |
| Msa0029700 | Msa0707860 | -0.809919 | 1.491360e-50 | -8.615850e-47 |
| Msa0029700 | Msa0707880 | -0.806550 | 7.789164e-50 | -8.615850e-47 |
| Msa0029700 | Msa0721930 | 0.809706 | 1.657166e-50 | -8.615850e-47 |
| Msa0029700 | Msa0734700 | 0.823899 | 1.080281e-53 | -8.615850e-47 |
| Msa0029700 | Msa0738460 | -0.822072 | 2.879956e-53 | -8.615850e-47 |
| Msa0029700 | Msa0756670 | -0.806293 | 8.825579e-50 | -8.615850e-47 |
| Msa0029700 | Msa0758880 | -0.802410 | 5.684849e-49 | -8.615850e-47 |
| Msa0029700 | Msa0762930 | 0.813969 | 1.955130e-51 | -8.615850e-47 |
| Msa0029700 | Msa0802950 | -0.809421 | 1.907663e-50 | -8.615850e-47 |
| Msa0029700 | Msa0813610 | 0.820828 | 5.580835e-53 | -8.615850e-47 |
| Msa0029700 | Msa0828350 | 0.818550 | 1.848675e-52 | -8.615850e-47 |
| Msa0029700 | Msa0831460 | -0.822441 | 2.365210e-53 | -8.615850e-47 |
| Msa0029700 | Msa0847140 | 0.811497 | 6.796951e-51 | -8.615850e-47 |
| Msa0029700 | Msa0854200 | 0.805308 | 1.421531e-49 | -8.615850e-47 |
| Msa0029700 | Msa0854230 | 0.801414 | 9.106784e-49 | -8.615850e-47 |
| Msa0029700 | Msa0861400 | -0.816787 | 4.617806e-52 | -8.615850e-47 |
| Msa0029700 | Msa0882360 | 0.801700 | 7.956126e-49 | -8.615850e-47 |
| Msa0029700 | Msa0888900 | -0.809554 | 1.786294e-50 | -8.615850e-47 |
| Msa0029700 | Msa0913520 | 0.817495 | 3.201827e-52 | -8.615850e-47 |
| Msa0029700 | Msa0921860 | 0.816871 | 4.422129e-52 | -8.615850e-47 |
| Msa0029700 | Msa0947420 | 0.824398 | 8.248929e-54 | -8.615850e-47 |
| Msa0029700 | Msa0958830 | 0.824772 | 6.736021e-54 | -8.615850e-47 |
| Msa0029700 | Msa0967900 | -0.818002 | 2.459554e-52 | -8.615850e-47 |
| Msa0029700 | Msa0968060 | -0.803075 | 4.145088e-49 | -8.615850e-47 |
| Msa0029700 | Msa0975440 | -0.801759 | 7.738566e-49 | -8.615850e-47 |
| Msa0029700 | Msa0987670 | 0.819715 | 1.004126e-52 | -8.615850e-47 |
| Msa0029700 | Msa1025440 | -0.810979 | 8.805139e-51 | -8.615850e-47 |
| Msa0029700 | Msa1026970 | 0.881509 | 2.262635e-70 | -8.615850e-47 |
| Msa0029700 | Msa1038230 | -0.805435 | 1.336590e-49 | -8.615850e-47 |
| Msa0029700 | Msa1050970 | 0.806008 | 1.013131e-49 | -8.615850e-47 |
| Msa0029700 | Msa1066770 | 0.803885 | 2.815696e-49 | -8.615850e-47 |
| Msa0029700 | Msa1067000 | 0.815438 | 9.244929e-52 | -8.615850e-47 |
| Msa0029700 | Msa1071420 | 0.832703 | 8.127520e-56 | -8.615850e-47 |
| Msa0029700 | Msa1078600 | -0.828165 | 1.046320e-54 | -8.615850e-47 |
| Msa0029700 | Msa1078770 | -0.819115 | 1.375679e-52 | -8.615850e-47 |
| Msa0029700 | Msa1085560 | 0.804240 | 2.374926e-49 | -8.615850e-47 |
| Msa0029700 | Msa1108960 | 0.804744 | 1.864981e-49 | -8.615850e-47 |
| Msa0029700 | Msa1111900 | 0.842033 | 3.310904e-58 | -8.615850e-47 |
| Msa0029700 | Msa1133760 | 0.846835 | 1.692127e-59 | -8.615850e-47 |
| Msa0029700 | Msa1136770 | -0.801437 | 9.008399e-49 | -8.615850e-47 |
| Msa0029700 | Msa1146980 | 0.810284 | 1.244182e-50 | -8.615850e-47 |
| Msa0029700 | Msa1154310 | 0.878174 | 3.476089e-69 | -8.615850e-47 |
| Msa0029700 | Msa1169600 | -0.821429 | 4.056570e-53 | -8.615850e-47 |
| Msa0029700 | Msa1171720 | 0.803920 | 2.768321e-49 | -8.615850e-47 |
| Msa0029700 | Msa1191530 | -0.813179 | 2.917792e-51 | -8.615850e-47 |
| Msa0029700 | Msa1191960 | -0.819044 | 1.427681e-52 | -8.615850e-47 |
| Msa0029700 | Msa1194480 | -0.807020 | 6.198734e-50 | -8.615850e-47 |
| Msa0029700 | Msa1197720 | 0.829353 | 5.399204e-55 | -8.615850e-47 |
| Msa0029700 | Msa1197820 | 0.826719 | 2.324518e-54 | -8.615850e-47 |
| Msa0029700 | Msa1200360 | 0.805722 | 1.163466e-49 | -8.615850e-47 |
| Msa0029700 | Msa1202710 | -0.819521 | 1.111816e-52 | -8.615850e-47 |
| Msa0029700 | Msa1204240 | 0.840048 | 1.099628e-57 | -8.615850e-47 |
| Msa0029700 | Msa1204870 | -0.803186 | 3.931222e-49 | -8.615850e-47 |
| Msa0029700 | Msa1204900 | -0.816651 | 4.955241e-52 | -8.615850e-47 |
| Msa0029700 | Msa1208530 | 0.852437 | 4.619390e-61 | -8.615850e-47 |
| Msa0029700 | Msa1209990 | -0.802212 | 6.244307e-49 | -8.615850e-47 |
| Msa0029700 | Msa1213860 | 0.827961 | 1.171168e-54 | -8.615850e-47 |
| Msa0029700 | Msa1214710 | 0.818320 | 2.084831e-52 | -8.615850e-47 |
| Msa0029700 | Msa1214780 | 0.838142 | 3.427054e-57 | -8.615850e-47 |
| Msa0029700 | Msa1228600 | -0.828447 | 8.945946e-55 | -8.615850e-47 |
| Msa0029700 | Msa1251410 | 0.821563 | 3.778565e-53 | -8.615850e-47 |
| Msa0029700 | Msa1251500 | 0.841007 | 6.168575e-58 | -8.615850e-47 |
| Msa0029700 | Msa1256490 | -0.810581 | 1.073281e-50 | -8.615850e-47 |
| Msa0029700 | Msa1282670 | 0.812044 | 5.168673e-51 | -8.615850e-47 |
| Msa0029700 | Msa1290090 | -0.810190 | 1.303927e-50 | -8.615850e-47 |
| Msa0029700 | Msa1292140 | 0.836082 | 1.152274e-56 | -8.615850e-47 |
| Msa0029700 | Msa1296810 | -0.804973 | 1.670241e-49 | -8.615850e-47 |
| Msa0029700 | Msa1298480 | -0.801086 | 1.062657e-48 | -8.615850e-47 |
| Msa0029700 | Msa1300730 | 0.830260 | 3.245654e-55 | -8.615850e-47 |
| Msa0029700 | Msa1301610 | -0.823870 | 1.097299e-53 | -8.615850e-47 |
| Msa0029700 | Msa1321840 | 0.813689 | 2.253640e-51 | -8.615850e-47 |
| Msa0029700 | Msa1327690 | -0.802828 | 4.660910e-49 | -8.615850e-47 |
| Msa0029700 | Msa1342360 | -0.808258 | 3.383038e-50 | -8.615850e-47 |
| Msa0029700 | Msa1348860 | -0.813872 | 2.054021e-51 | -8.615850e-47 |
| Msa0029700 | Msa1352580 | 0.802897 | 4.510433e-49 | -8.615850e-47 |
| Msa0029700 | Msa1359520 | 0.816499 | 5.358395e-52 | -8.615850e-47 |
| Msa0029700 | Msa1361580 | -0.805409 | 1.353786e-49 | -8.615850e-47 |
| Msa0029700 | Msa1365130 | -0.802387 | 5.746827e-49 | -8.615850e-47 |
| Msa0029700 | Msa1367900 | -0.805683 | 1.185676e-49 | -8.615850e-47 |
| Msa0029700 | Msa1369830 | 0.839739 | 1.323142e-57 | -8.615850e-47 |
| Msa0029700 | Msa1371540 | -0.812459 | 4.194313e-51 | -8.615850e-47 |
| Msa0029700 | Msa1375640 | 0.813580 | 2.381731e-51 | -8.615850e-47 |
| Msa0029700 | Msa1375730 | 0.836689 | 8.078807e-57 | -8.615850e-47 |
| Msa0029700 | Msa1377980 | -0.810997 | 8.725561e-51 | -8.615850e-47 |
| Msa0029700 | Msa1387100 | -0.810117 | 1.352066e-50 | -8.615850e-47 |
| Msa0029700 | Msa1395380 | -0.808978 | 2.374198e-50 | -8.615850e-47 |
| Msa0029700 | Msa1401640 | -0.808522 | 2.971479e-50 | -8.615850e-47 |
| Msa0029700 | Msa1403940 | 0.815894 | 7.316909e-52 | -8.615850e-47 |
| Msa0029700 | Msa1408280 | -0.811338 | 7.358399e-51 | -8.615850e-47 |
| Msa0029700 | Msa1412270 | -0.816209 | 6.222466e-52 | -8.615850e-47 |
| Msa0029700 | Msa1422160 | -0.807845 | 4.143123e-50 | -8.615850e-47 |
| Msa0029700 | Msa1429810 | 0.810153 | 1.327986e-50 | -8.615850e-47 |
| Msa0029700 | Msa1434300 | 0.830049 | 3.655508e-55 | -8.615850e-47 |
| Msa0029700 | Msa1434700 | 0.807622 | 4.620533e-50 | -8.615850e-47 |
| Msa0029700 | Msa1453180 | -0.812691 | 3.732118e-51 | -8.615850e-47 |
| Msa0029700 | Msa1454300 | -0.810833 | 9.467667e-51 | -8.615850e-47 |
| Msa0029700 | Msa1456180 | -0.810364 | 1.196092e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0029700 | MtrunA17_Chr1g0186431 | 98.419 | 759 | 12 | 0 | 1 | 759 | 1 | 759 | 0.0 | 1540 |
| Msa0029700 | MtrunA17_Chr1g0168161 | 71.146 | 759 | 212 | 6 | 1 | 754 | 1 | 757 | 0.0 | 1065 |
| Msa0029700 | MtrunA17_Chr7g0274831 | 57.625 | 741 | 301 | 6 | 23 | 757 | 28 | 761 | 0.0 | 885 |
| Msa0029700 | MtrunA17_Chr1g0190021 | 56.876 | 749 | 305 | 9 | 19 | 757 | 18 | 758 | 0.0 | 840 |
| Msa0029700 | MtrunA17_Chr4g0013831 | 41.835 | 741 | 398 | 18 | 29 | 750 | 5 | 731 | 5.03e-177 | 525 |
| Msa0029700 | MtrunA17_Chr7g0269631 | 40.729 | 631 | 349 | 13 | 29 | 645 | 5 | 624 | 1.78e-129 | 399 |
| Msa0029700 | MtrunA17_Chr4g0077091 | 86.667 | 75 | 9 | 1 | 686 | 759 | 1 | 75 | 2.07e-35 | 128 |
| Msa0029700 | MtrunA17_Chr8g0377481 | 31.579 | 133 | 82 | 3 | 631 | 755 | 837 | 968 | 6.70e-15 | 79.0 |
| Msa0029700 | MtrunA17_Chr8g0377481 | 22.959 | 392 | 244 | 10 | 344 | 690 | 371 | 749 | 7.07e-14 | 75.9 |
| Msa0029700 | MtrunA17_Chr5g0405701 | 25.369 | 339 | 209 | 8 | 355 | 665 | 499 | 821 | 1.16e-14 | 78.6 |
| Msa0029700 | MtrunA17_Chr3g0122391 | 30.534 | 131 | 83 | 3 | 631 | 754 | 895 | 1024 | 4.49e-14 | 76.3 |
| Msa0029700 | MtrunA17_Chr3g0122391 | 21.888 | 466 | 307 | 11 | 344 | 758 | 419 | 878 | 6.77e-14 | 75.9 |
| Msa0029700 | MtrunA17_Chr5g0447641 | 21.778 | 450 | 294 | 11 | 344 | 741 | 596 | 1039 | 1.18e-13 | 75.1 |
| Msa0029700 | MtrunA17_Chr8g0371601 | 22.687 | 335 | 224 | 8 | 355 | 665 | 461 | 784 | 1.65e-13 | 74.7 |
| Msa0029700 | MtrunA17_Chr8g0392301 | 22.653 | 490 | 290 | 13 | 344 | 757 | 362 | 838 | 1.92e-12 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0029700 | AT3G23150.1 | 59.847 | 782 | 278 | 13 | 1 | 758 | 1 | 770 | 0.0 | 885 |
| Msa0029700 | AT3G04580.2 | 58.043 | 746 | 294 | 12 | 23 | 754 | 21 | 761 | 0.0 | 830 |
| Msa0029700 | AT3G04580.1 | 58.043 | 746 | 294 | 12 | 23 | 754 | 21 | 761 | 0.0 | 830 |
| Msa0029700 | AT3G23150.2 | 61.937 | 599 | 202 | 10 | 1 | 582 | 1 | 590 | 0.0 | 692 |
| Msa0029700 | AT1G04310.1 | 53.859 | 622 | 255 | 10 | 9 | 612 | 16 | 623 | 0.0 | 595 |
| Msa0029700 | AT1G04310.2 | 53.859 | 622 | 255 | 10 | 9 | 612 | 16 | 623 | 0.0 | 595 |
| Msa0029700 | AT1G66340.1 | 39.685 | 761 | 400 | 18 | 29 | 757 | 4 | 737 | 1.73e-170 | 508 |
| Msa0029700 | AT2G40940.1 | 40.981 | 571 | 321 | 10 | 29 | 589 | 4 | 568 | 6.79e-125 | 387 |
| Msa0029700 | AT5G35750.1 | 24.842 | 475 | 287 | 16 | 332 | 758 | 565 | 1017 | 6.66e-19 | 92.4 |
| Msa0029700 | AT5G35750.1 | 30.263 | 152 | 83 | 3 | 624 | 754 | 1024 | 1173 | 6.90e-13 | 73.2 |
| Msa0029700 | AT1G27320.1 | 21.875 | 480 | 307 | 10 | 325 | 757 | 410 | 868 | 1.31e-16 | 85.1 |
| Msa0029700 | AT1G27320.1 | 26.966 | 178 | 99 | 5 | 603 | 754 | 856 | 1028 | 5.54e-12 | 70.1 |
| Msa0029700 | AT2G01830.5 | 23.577 | 369 | 223 | 9 | 344 | 661 | 440 | 800 | 2.11e-12 | 71.6 |
| Msa0029700 | AT2G01830.5 | 29.851 | 134 | 81 | 3 | 630 | 751 | 929 | 1061 | 3.70e-11 | 67.4 |
| Msa0029700 | AT2G01830.1 | 23.577 | 369 | 223 | 9 | 344 | 661 | 428 | 788 | 2.22e-12 | 71.2 |
| Msa0029700 | AT2G01830.1 | 29.851 | 134 | 81 | 3 | 630 | 751 | 917 | 1049 | 3.53e-11 | 67.4 |
| Msa0029700 | AT2G01830.4 | 23.577 | 369 | 223 | 9 | 344 | 661 | 428 | 788 | 2.22e-12 | 71.2 |
| Msa0029700 | AT2G01830.4 | 29.851 | 134 | 81 | 3 | 630 | 751 | 917 | 1049 | 3.53e-11 | 67.4 |
| Msa0029700 | AT2G01830.6 | 23.577 | 369 | 223 | 9 | 344 | 661 | 428 | 788 | 2.22e-12 | 71.2 |
| Msa0029700 | AT2G01830.6 | 29.851 | 134 | 81 | 3 | 630 | 751 | 917 | 1049 | 3.53e-11 | 67.4 |
| Msa0029700 | AT2G01830.3 | 23.577 | 369 | 223 | 9 | 344 | 661 | 428 | 788 | 2.22e-12 | 71.2 |
| Msa0029700 | AT2G01830.3 | 29.851 | 134 | 81 | 3 | 630 | 751 | 917 | 1049 | 3.53e-11 | 67.4 |
| Msa0029700 | AT2G17820.1 | 30.935 | 139 | 95 | 1 | 355 | 492 | 488 | 626 | 2.53e-12 | 71.2 |
| Msa0029700 | AT2G01830.2 | 23.577 | 369 | 223 | 9 | 344 | 661 | 451 | 811 | 2.94e-12 | 70.9 |
| Msa0029700 | AT2G01830.2 | 29.851 | 134 | 81 | 3 | 630 | 751 | 940 | 1072 | 3.15e-11 | 67.8 |
Find 207 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGCCTATGCACTCGATTT+TGG | 0.157778 | 1_1:+55072652 | Msa0029700:CDS |
| TTTCTGAATGGTTGGACTTA+TGG | 0.204071 | 1_1:+55071801 | Msa0029700:CDS |
| AAAGTAATGAACTTTGTTAA+TGG | 0.234678 | 1_1:+55070786 | Msa0029700:five_prime_UTR |
| TTAATAACTTAAGTTATCTT+TGG | 0.242888 | 1_1:+55071426 | Msa0029700:five_prime_UTR |
| GTGGACTATTGAGAGTATTT+TGG | 0.244417 | 1_1:+55071629 | Msa0029700:CDS |
| CCTTTGGAGATAAGGTCTTT+TGG | 0.244781 | 1_1:+55072815 | Msa0029700:CDS |
| CAAATGCATGTGTGTTTATA+AGG | 0.254306 | 1_1:+55072874 | Msa0029700:CDS |
| TTCCATTCAAGTCATTCTTT+TGG | 0.259941 | 1_1:+55074100 | Msa0029700:CDS |
| TGAAGTCTCATTCTTGTTCT+TGG | 0.266032 | 1_1:+55074403 | Msa0029700:three_prime_UTR |
| TAATAACTTAAGTTATCTTT+GGG | 0.267336 | 1_1:+55071427 | Msa0029700:five_prime_UTR |
| AATTTATATATATCCTTAGA+TGG | 0.290960 | 1_1:+55071468 | Msa0029700:five_prime_UTR |
| TAAGGATATATATAAATTAT+TGG | 0.299226 | 1_1:-55071463 | None:intergenic |
| AAGTAATGAACTTTGTTAAT+GGG | 0.304545 | 1_1:+55070787 | Msa0029700:five_prime_UTR |
| GGAAGTTTAAAAGCGGAAAT+AGG | 0.304993 | 1_1:+55074171 | Msa0029700:CDS |
| GCAGTCAAGGCAACAATTAT+AGG | 0.308408 | 1_1:-55074194 | None:intergenic |
| GTCTTTACCAAACCATGTTA+TGG | 0.315997 | 1_1:+55072925 | Msa0029700:CDS |
| GCGCTTGCTGTTTCCAGTCT+TGG | 0.319928 | 1_1:+55072281 | Msa0029700:CDS |
| CAGACCTCTCAACATTGAAT+TGG | 0.323833 | 1_1:-55073946 | None:intergenic |
| AGCTCAGTGTCCTCAGGTCC+CGG | 0.332201 | 1_1:+55073169 | Msa0029700:CDS |
| AATTAAGGTGGTTGCTGATC+AGG | 0.332673 | 1_1:+55072469 | Msa0029700:CDS |
| TTCTTCTTCGGTTTCAATTA+CGG | 0.333952 | 1_1:+55073868 | Msa0029700:CDS |
| TTATAGAACACAGTTCTCTT+TGG | 0.335971 | 1_1:+55074433 | Msa0029700:three_prime_UTR |
| GACATCTCTACGTGGAAAAT+TGG | 0.336590 | 1_1:-55074469 | None:intergenic |
| CTGATTCTTCAATCCATCTA+AGG | 0.342359 | 1_1:-55071481 | None:intergenic |
| TGTATGCAGATTGGTGTTAA+TGG | 0.343123 | 1_1:+55074245 | Msa0029700:CDS |
| GTGGAGCTTTCGAAAACATT+AGG | 0.351077 | 1_1:+55072095 | Msa0029700:CDS |
| CATATTGGTCTTGATTCTTC+CGG | 0.355811 | 1_1:+55072406 | Msa0029700:CDS |
| TGCACCCACCTTCTTGTCAT+TGG | 0.359427 | 1_1:-55070740 | None:intergenic |
| GTAAATATTAGATTTGAGAT+AGG | 0.360085 | 1_1:+55073118 | Msa0029700:CDS |
| TCAGGCTTGTTATGCCATAT+TGG | 0.362096 | 1_1:+55072391 | Msa0029700:CDS |
| TGCTTCTCAAAGTGAAGGTC+AGG | 0.367109 | 1_1:+55071925 | Msa0029700:CDS |
| TTTGAATGCCTTACTGTCAT+TGG | 0.369155 | 1_1:+55074065 | Msa0029700:CDS |
| CTCCAAATGCCTGATATAGA+TGG | 0.374320 | 1_1:+55074125 | Msa0029700:CDS |
| CTTATAAACACACATGCATT+TGG | 0.375755 | 1_1:-55072873 | None:intergenic |
| TCAGGAGCTGGAGATAATTA+AGG | 0.381209 | 1_1:+55072454 | Msa0029700:CDS |
| TCTTTACCAAACCATGTTAT+GGG | 0.386190 | 1_1:+55072926 | Msa0029700:CDS |
| ATCCATCTATATCAGGCATT+TGG | 0.388907 | 1_1:-55074127 | None:intergenic |
| GGATGATGGAAGATTTCCTT+TGG | 0.389319 | 1_1:+55072799 | Msa0029700:CDS |
| TTATCTTTGGGGAATGACTA+TGG | 0.398113 | 1_1:+55071439 | Msa0029700:five_prime_UTR |
| ACAACATCTGGATCAGTAAT+CGG | 0.399774 | 1_1:-55072212 | None:intergenic |
| TACTATTCTGTATACTACTT+TGG | 0.402484 | 1_1:+55072073 | Msa0029700:CDS |
| TGAGGAATACCGTGAGTATA+TGG | 0.405398 | 1_1:-55073834 | None:intergenic |
| GCTCGAACGTCCCTTTCAAA+TGG | 0.406052 | 1_1:+55071730 | Msa0029700:CDS |
| GAGATTCTGCGGCACGAAAC+CGG | 0.409851 | 1_1:-55070652 | None:intergenic |
| AAAGCATGACACTTCTTCTT+CGG | 0.410525 | 1_1:+55073856 | Msa0029700:CDS |
| TTCATAAGCTAGAATTTCAT+AGG | 0.411135 | 1_1:-55070605 | None:intergenic |
| GGATTGTAACCATGGGGAAG+GGG | 0.412828 | 1_1:+55073000 | Msa0029700:CDS |
| ACTTCGAATCCATCTATATC+AGG | 0.414647 | 1_1:-55074134 | None:intergenic |
| GATCTTAACAAAGCTTTGTC+AGG | 0.415596 | 1_1:-55070874 | None:intergenic |
| GATCCTAGTATTTCGAGTTT+CGG | 0.416197 | 1_1:+55073024 | Msa0029700:CDS |
| GCTCAGTGTCCTCAGGTCCC+GGG | 0.416308 | 1_1:+55073170 | Msa0029700:CDS |
| TTCCGTGACTTCCGCTTCTA+CGG | 0.417846 | 1_1:+55074040 | Msa0029700:CDS |
| TCAACTTATGAGAGAGAAGT+TGG | 0.419273 | 1_1:+55072532 | Msa0029700:CDS |
| CTTTAAGATTCTCACTGCCT+TGG | 0.419423 | 1_1:+55071860 | Msa0029700:CDS |
| AGTCAAGGGAGGAATGAAAA+AGG | 0.420629 | 1_1:+55073058 | Msa0029700:CDS |
| TTGAAGAATCAGCAGCATAT+TGG | 0.423941 | 1_1:+55071492 | Msa0029700:five_prime_UTR |
| GAAGATTTCCTTTGGAGATA+AGG | 0.424573 | 1_1:+55072807 | Msa0029700:CDS |
| GATTGTAACCATGGGGAAGG+GGG | 0.427873 | 1_1:+55073001 | Msa0029700:CDS |
| TCCGTGACTTCCGCTTCTAC+GGG | 0.428889 | 1_1:+55074041 | Msa0029700:CDS |
| GAATGCTATGATGGCAAGCC+AGG | 0.432214 | 1_1:+55072589 | Msa0029700:CDS |
| CATGTGTGTTTATAAGGGCT+TGG | 0.432309 | 1_1:+55072880 | Msa0029700:CDS |
| TCGAAGTCGCCGCAAGGATT+CGG | 0.432385 | 1_1:+55074150 | Msa0029700:CDS |
| AATAAATATAATCAGAAGAA+TGG | 0.434544 | 1_1:+55074614 | Msa0029700:three_prime_UTR |
| ACCTAGATCTTGGAGCAATC+AGG | 0.441634 | 1_1:+55072436 | Msa0029700:CDS |
| CTGCCGAAACTCGAAATACT+AGG | 0.444425 | 1_1:-55073027 | None:intergenic |
| GCTCCAAGATCTAGGTTCTT+CGG | 0.445823 | 1_1:-55072429 | None:intergenic |
| TTCTTCTGCACTTGCAGTCA+AGG | 0.446455 | 1_1:-55074207 | None:intergenic |
| ACTAGATGAGCTTGGTCTCC+AGG | 0.446804 | 1_1:-55073089 | None:intergenic |
| AGTTGATGCAAGGAAACTTA+TGG | 0.447288 | 1_1:+55073805 | Msa0029700:intron |
| ATGTGTGTTTATAAGGGCTT+GGG | 0.448667 | 1_1:+55072881 | Msa0029700:CDS |
| TCATCACCCATAACATGGTT+TGG | 0.448703 | 1_1:-55072932 | None:intergenic |
| TCCTGATTGCTCCAAGATCT+AGG | 0.449928 | 1_1:-55072437 | None:intergenic |
| CGGAAGAATCAAGACCAATA+TGG | 0.450177 | 1_1:-55072405 | None:intergenic |
| GGCATTCGAATGGCAGCAAC+CGG | 0.452555 | 1_1:-55072323 | None:intergenic |
| GCAATTCCTTGCATCAAAAC+CGG | 0.454415 | 1_1:-55074281 | None:intergenic |
| CGGCCGAAGAACCTAGATCT+TGG | 0.454895 | 1_1:+55072426 | Msa0029700:CDS |
| CTCGAACGTCCCTTTCAAAT+GGG | 0.457846 | 1_1:+55071731 | Msa0029700:CDS |
| GCGCAATCGAGCTTTGCAAC+TGG | 0.458884 | 1_1:+55072559 | Msa0029700:CDS |
| AACAGTAGTGATTCTGAAGT+TGG | 0.461479 | 1_1:+55073145 | Msa0029700:CDS |
| TAATGGAGTAATCCGAAAAC+CGG | 0.467924 | 1_1:+55074262 | Msa0029700:CDS |
| AACTGTTGACAGGGCCAGAC+TGG | 0.473239 | 1_1:+55071369 | Msa0029700:intron |
| ATAATCAATTTCTACCAGTC+TGG | 0.474547 | 1_1:-55071383 | None:intergenic |
| GCATATGGTTGGGAATCTAC+TGG | 0.475238 | 1_1:+55072979 | Msa0029700:CDS |
| ACGAAATAAAGCAACTCAAG+AGG | 0.478092 | 1_1:-55071702 | None:intergenic |
| AGAAGAAGTGTCATGCTTTG+AGG | 0.480685 | 1_1:-55073852 | None:intergenic |
| GAATGCTTACTCAAGAGATT+CGG | 0.482071 | 1_1:+55072033 | Msa0029700:CDS |
| AAGTCATGAGTGATGGTATG+AGG | 0.483265 | 1_1:+55072630 | Msa0029700:CDS |
| TGGGATCTTGGACGGGAGGT+TGG | 0.484581 | 1_1:+55071972 | Msa0029700:CDS |
| GTTGGCAGCTCAGTGTCCTC+AGG | 0.485068 | 1_1:+55073163 | Msa0029700:CDS |
| TCAGCAGCATATTGGATCAA+TGG | 0.486018 | 1_1:+55071500 | Msa0029700:exon |
| TCTGAAATGAGTTTCTTGCC+TGG | 0.486268 | 1_1:-55072607 | None:intergenic |
| ATCCAAAAGAATGACTTGAA+TGG | 0.489294 | 1_1:-55074102 | None:intergenic |
| AAATGCATGTGTGTTTATAA+GGG | 0.490040 | 1_1:+55072875 | Msa0029700:CDS |
| TGGTCTTATTATGAAGCAAA+AGG | 0.490084 | 1_1:+55071992 | Msa0029700:CDS |
| CATCATTTATCAAGTTTGAA+AGG | 0.492324 | 1_1:-55072757 | None:intergenic |
| TAAATATTAGATTTGAGATA+GGG | 0.495686 | 1_1:+55073119 | Msa0029700:CDS |
| ATATACCAGTGATAGATATG+AGG | 0.497274 | 1_1:+55073201 | Msa0029700:CDS |
| ATCTTGGAGCAATCAGGAGC+TGG | 0.497970 | 1_1:+55072442 | Msa0029700:CDS |
| TCCTTTGCTTCTCAAAGTGA+AGG | 0.498700 | 1_1:+55071920 | Msa0029700:CDS |
| CTCAGTGTCCTCAGGTCCCG+GGG | 0.500200 | 1_1:+55073171 | Msa0029700:CDS |
| TCATCATCACAATTACATCT+AGG | 0.500845 | 1_1:-55071597 | None:intergenic |
| GACAGCTCTGCAAAGGATGA+TGG | 0.501785 | 1_1:+55072785 | Msa0029700:CDS |
| TCCCGTAGAAGCGGAAGTCA+CGG | 0.504322 | 1_1:-55074042 | None:intergenic |
| TTTCGAGTTTCGGCAGACGC+TGG | 0.505966 | 1_1:+55073034 | Msa0029700:CDS |
| TGGATTGTAACCATGGGGAA+GGG | 0.508641 | 1_1:+55072999 | Msa0029700:CDS |
| TATTCTGTATACTACTTTGG+TGG | 0.509087 | 1_1:+55072076 | Msa0029700:CDS |
| GAGAGGTCTGCAAGTTCTGT+TGG | 0.509235 | 1_1:+55073959 | Msa0029700:CDS |
| ATTGTAACCATGGGGAAGGG+GGG | 0.512664 | 1_1:+55073002 | Msa0029700:CDS |
| TGATTTGATGCTAAAGAAAG+TGG | 0.513744 | 1_1:+55070816 | Msa0029700:five_prime_UTR |
| TGGTGATTTCTTGATTGCTG+TGG | 0.516847 | 1_1:+55071665 | Msa0029700:CDS |
| AGATTCTGCGGCACGAAACC+GGG | 0.517072 | 1_1:-55070651 | None:intergenic |
| AAGTGCAGAAGAAGATTTGT+GGG | 0.517262 | 1_1:+55074217 | Msa0029700:CDS |
| CTTACTGTCATTGGACCTGT+TGG | 0.517705 | 1_1:+55074074 | Msa0029700:CDS |
| ACCTTCACTTTGAGAAGCAA+AGG | 0.521628 | 1_1:-55071921 | None:intergenic |
| CAACAGGTCCAATGACAGTA+AGG | 0.522523 | 1_1:-55074073 | None:intergenic |
| CTCAAGAGGGATTGAGAAGT+AGG | 0.523719 | 1_1:-55071688 | None:intergenic |
| TGTTTCTAGTGACGCAGGAC+CGG | 0.528437 | 1_1:+55072304 | Msa0029700:CDS |
| GTTGCGTTCTGAAGATTCCC+CGG | 0.528905 | 1_1:-55073919 | None:intergenic |
| AAATTACAAACACGTAACAT+TGG | 0.530189 | 1_1:-55072344 | None:intergenic |
| GGCGAGAAGGAATGCTATGA+TGG | 0.531744 | 1_1:+55072580 | Msa0029700:CDS |
| TCGGCAGACGCTGGAAGTCA+AGG | 0.534100 | 1_1:+55073043 | Msa0029700:CDS |
| AAACTTGATAAATGATGCCA+TGG | 0.538571 | 1_1:+55072763 | Msa0029700:CDS |
| CTCAAAAGAATTCTGATGCA+AGG | 0.538760 | 1_1:+55074311 | Msa0029700:CDS |
| ATCTACTGGATTGTAACCAT+GGG | 0.542949 | 1_1:+55072993 | Msa0029700:CDS |
| TTGCGTTCTGAAGATTCCCC+GGG | 0.544742 | 1_1:-55073918 | None:intergenic |
| GAACAAGGACCCATTTGAAA+GGG | 0.546654 | 1_1:-55071740 | None:intergenic |
| TCTGCCCTCATATCTATCAC+TGG | 0.547398 | 1_1:-55073206 | None:intergenic |
| TGAACAAGGACCCATTTGAA+AGG | 0.548158 | 1_1:-55071741 | None:intergenic |
| GCAATAGCCATCTCTGAACC+CGG | 0.551030 | 1_1:+55073900 | Msa0029700:CDS |
| GGCAGTGAGAATCTTAAAGA+TGG | 0.551039 | 1_1:-55071856 | None:intergenic |
| CTCTCTCAAAACTAAAACAA+CGG | 0.552348 | 1_1:+55070384 | Msa0029700:five_prime_UTR |
| ACTTGAATGGAAGATCCAAC+AGG | 0.554016 | 1_1:-55074089 | None:intergenic |
| CAAGTGCAGAAGAAGATTTG+TGG | 0.554779 | 1_1:+55074216 | Msa0029700:CDS |
| TAACAAGCCTGAGTTAGCTC+AGG | 0.557598 | 1_1:-55072380 | None:intergenic |
| ACATCACCACTAGATGAGCT+TGG | 0.559230 | 1_1:-55073097 | None:intergenic |
| CGAAATAAAGCAACTCAAGA+GGG | 0.560282 | 1_1:-55071701 | None:intergenic |
| TTCAGAGATGGCTATTGCAA+TGG | 0.562065 | 1_1:-55073895 | None:intergenic |
| TGTTAATTGCAGTTGATGCA+AGG | 0.562733 | 1_1:+55073795 | Msa0029700:intron |
| TATTTGCAAGAGGATAGTCC+AGG | 0.567491 | 1_1:+55073240 | Msa0029700:CDS |
| AATCTACTGGATTGTAACCA+TGG | 0.568873 | 1_1:+55072992 | Msa0029700:CDS |
| TGGGAAAGATGTATGCAGAT+TGG | 0.570128 | 1_1:+55074236 | Msa0029700:CDS |
| ATCCTTTGCAGAGCTGTCCA+TGG | 0.572923 | 1_1:-55072780 | None:intergenic |
| GTGATGATGAGAACAGTTTG+TGG | 0.575845 | 1_1:+55071610 | Msa0029700:CDS |
| CTGGATTGTAACCATGGGGA+AGG | 0.575928 | 1_1:+55072998 | Msa0029700:CDS |
| AAAGACATGGGATCTTGGAC+GGG | 0.576526 | 1_1:+55071965 | Msa0029700:CDS |
| TACGTGGAAAATTGGTAGCA+AGG | 0.578298 | 1_1:-55074461 | None:intergenic |
| AAAAGACATGGGATCTTGGA+CGG | 0.578361 | 1_1:+55071964 | Msa0029700:CDS |
| AGAGAAAATGAAAGTGTTGG+TGG | 0.580969 | 1_1:-55070527 | None:intergenic |
| GAATGAACAGAAGCTTATTG+TGG | 0.580973 | 1_1:+55072709 | Msa0029700:CDS |
| CAATAGCCATCTCTGAACCC+GGG | 0.581848 | 1_1:+55073901 | Msa0029700:CDS |
| TCCTCTCATCACCCATAACA+TGG | 0.582290 | 1_1:-55072937 | None:intergenic |
| GTCACTAGAAACACCAAGAC+TGG | 0.584089 | 1_1:-55072294 | None:intergenic |
| CAAGATCTAGGTTCTTCGGC+CGG | 0.584183 | 1_1:-55072425 | None:intergenic |
| CAGAATAGTATGTCTATCGA+GGG | 0.585211 | 1_1:-55072060 | None:intergenic |
| GAGATGGCTATTGCAATGGA+AGG | 0.587280 | 1_1:-55073891 | None:intergenic |
| ATTATTGTTAAGATAGAACA+AGG | 0.588864 | 1_1:-55070553 | None:intergenic |
| CGGCAGACGCTGGAAGTCAA+GGG | 0.589768 | 1_1:+55073044 | Msa0029700:CDS |
| TGAGCTTTAGTATTTGCAAG+AGG | 0.590203 | 1_1:+55073230 | Msa0029700:CDS |
| AGGAACACCTGAGCTAACTC+AGG | 0.590712 | 1_1:+55072373 | Msa0029700:CDS |
| TGCAGCATGCGATAGAGCCA+CGG | 0.591811 | 1_1:-55072495 | None:intergenic |
| GCTTTGTTAAGATCTGATCA+AGG | 0.592040 | 1_1:+55070883 | Msa0029700:five_prime_UTR |
| CCAAAAGACCTTATCTCCAA+AGG | 0.594431 | 1_1:-55072815 | None:intergenic |
| ACCATGTTATGGGTGATGAG+AGG | 0.595070 | 1_1:+55072936 | Msa0029700:CDS |
| ATGTTATGGGTGATGAGAGG+AGG | 0.595173 | 1_1:+55072939 | Msa0029700:CDS |
| TTTCAATAAAGGGTCGCACC+CGG | 0.595477 | 1_1:+55070633 | Msa0029700:five_prime_UTR |
| GAGCTTTGCAACTGGCGAGA+AGG | 0.595611 | 1_1:+55072567 | Msa0029700:CDS |
| AGATTCCCCGGGTTCAGAGA+TGG | 0.597080 | 1_1:-55073907 | None:intergenic |
| GCTTCTCAAAGTGAAGGTCA+GGG | 0.597196 | 1_1:+55071926 | Msa0029700:CDS |
| ATGGATTCGAAGTCGCCGCA+AGG | 0.597554 | 1_1:+55074144 | Msa0029700:CDS |
| TCACTCATGAATTGAACGCA+AGG | 0.600049 | 1_1:+55072171 | Msa0029700:CDS |
| GCATTCAAATCCCGTAGAAG+CGG | 0.602716 | 1_1:-55074051 | None:intergenic |
| TATTCCAATTCAATGTTGAG+AGG | 0.606759 | 1_1:+55073942 | Msa0029700:CDS |
| TGTTATGGGTGATGAGAGGA+GGG | 0.608371 | 1_1:+55072940 | Msa0029700:CDS |
| ACTGGTATATGTCCTACCCC+CGG | 0.609146 | 1_1:-55073188 | None:intergenic |
| AATAACTTAAGTTATCTTTG+GGG | 0.610377 | 1_1:+55071428 | Msa0029700:five_prime_UTR |
| AAACACACATGCATTTGGCA+AGG | 0.611821 | 1_1:-55072868 | None:intergenic |
| GACATGGGATCTTGGACGGG+AGG | 0.611959 | 1_1:+55071968 | Msa0029700:CDS |
| TTTCAGAAAGTCATGAGTGA+TGG | 0.612216 | 1_1:+55072623 | Msa0029700:CDS |
| AGATACACACAAGAGGATAG+AGG | 0.612399 | 1_1:-55071553 | None:intergenic |
| TTTAAACTTCCGAATCCTTG+CGG | 0.614777 | 1_1:-55074159 | None:intergenic |
| ACAGAATAGTATGTCTATCG+AGG | 0.617871 | 1_1:-55072061 | None:intergenic |
| TATACCAGTGATAGATATGA+GGG | 0.618668 | 1_1:+55073202 | Msa0029700:CDS |
| CTTGGTGTTTCTAGTGACGC+AGG | 0.622071 | 1_1:+55072299 | Msa0029700:CDS |
| AATCCCAAAATCGAGTGCAT+AGG | 0.622628 | 1_1:-55072656 | None:intergenic |
| ACGTAACATTGGCATTCGAA+TGG | 0.630068 | 1_1:-55072333 | None:intergenic |
| GATGCAAGGAAACTTATGGT+TGG | 0.630539 | 1_1:+55073809 | Msa0029700:CDS |
| TGAAGAGAAAATGAAAGTGT+TGG | 0.632895 | 1_1:-55070530 | None:intergenic |
| CGCAGTTGCACAAGACACCA+AGG | 0.633662 | 1_1:-55071877 | None:intergenic |
| TGCCATGGACAGCTCTGCAA+AGG | 0.638516 | 1_1:+55072778 | Msa0029700:CDS |
| TCTTATTATGAAGCAAAAGG+AGG | 0.642117 | 1_1:+55071995 | Msa0029700:CDS |
| GGTTGCTGATCAGGTTGCCG+TGG | 0.646373 | 1_1:+55072478 | Msa0029700:CDS |
| TAAAAGCAATGAACTGAACA+AGG | 0.647813 | 1_1:-55071755 | None:intergenic |
| TTGTTGCAGATACACACAAG+AGG | 0.652660 | 1_1:-55071560 | None:intergenic |
| GTTTGCAAAATTGTGCTGTG+TGG | 0.653112 | 1_1:+55072117 | Msa0029700:CDS |
| TTACTGTGGAAGAGATTCTG+CGG | 0.664854 | 1_1:-55070663 | None:intergenic |
| TGGAGACCAAGCTCATCTAG+TGG | 0.665111 | 1_1:+55073091 | Msa0029700:CDS |
| AGGATTCGGAAGTTTAAAAG+CGG | 0.670736 | 1_1:+55074164 | Msa0029700:CDS |
| GGAGCTGGAGATAATTAAGG+TGG | 0.673703 | 1_1:+55072457 | Msa0029700:CDS |
| ACCATAAGCTGAAAAGTGTG+AGG | 0.673832 | 1_1:-55071825 | None:intergenic |
| AATAGCCATCTCTGAACCCG+GGG | 0.674767 | 1_1:+55073902 | Msa0029700:CDS |
| TTGTTAAGATCTGATCAAGG+TGG | 0.678949 | 1_1:+55070886 | Msa0029700:five_prime_UTR |
| TCATGAGTGATGGTATGAGG+AGG | 0.683443 | 1_1:+55072633 | Msa0029700:CDS |
| TGGTTGGTACCATATACTCA+CGG | 0.687045 | 1_1:+55073825 | Msa0029700:CDS |
| CAGACGCTGGAAGTCAAGGG+AGG | 0.709276 | 1_1:+55073047 | Msa0029700:CDS |
| TCTACTGGATTGTAACCATG+GGG | 0.741326 | 1_1:+55072994 | Msa0029700:CDS |
| TCAGTGTCCTCAGGTCCCGG+GGG | 0.744374 | 1_1:+55073172 | Msa0029700:CDS |
| TTATGTATGACATCTCTACG+TGG | 0.754667 | 1_1:-55074477 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTAAAATTTTAATT+TGG | + | chr1_1:55070696-55070715 | Msa0029700:five_prime_UTR | 0.0% |
| !!! | TGATTTTTTTTTTTATTCTA+TGG | + | chr1_1:55071113-55071132 | Msa0029700:intron | 10.0% |
| !!! | AATTAATTTGTGAAAAAATA+TGG | + | chr1_1:55071273-55071292 | Msa0029700:intron | 10.0% |
| !!! | ATATTATTTTTTGTTTGATT+TGG | + | chr1_1:55071317-55071336 | Msa0029700:intron | 10.0% |
| !! | TAAGGATATATATAAATTAT+TGG | - | chr1_1:55071466-55071485 | None:intergenic | 10.0% |
| !!! | AAAAAAAACAATTTTTACTG+TGG | - | chr1_1:55070680-55070699 | None:intergenic | 15.0% |
| !!! | ATTGTATAATTTTTTTTAGG+TGG | + | chr1_1:55070985-55071004 | Msa0029700:intron | 15.0% |
| !!! | TTGTATAATTTTTTTTAGGT+GGG | + | chr1_1:55070986-55071005 | Msa0029700:intron | 15.0% |
| !!! | TTAATATTATTTCTTGGATT+TGG | + | chr1_1:55071056-55071075 | Msa0029700:intron | 15.0% |
| !! | GTTAACTTAAATTATAAGAT+TGG | + | chr1_1:55071237-55071256 | Msa0029700:intron | 15.0% |
| !! | TTAATAACTTAAGTTATCTT+TGG | + | chr1_1:55071426-55071445 | Msa0029700:five_prime_UTR | 15.0% |
| !! | TAATAACTTAAGTTATCTTT+GGG | + | chr1_1:55071427-55071446 | Msa0029700:five_prime_UTR | 15.0% |
| !! | AATTTATATATATCCTTAGA+TGG | + | chr1_1:55071468-55071487 | Msa0029700:five_prime_UTR | 15.0% |
| !!! | TAAATATTAGATTTGAGATA+GGG | + | chr1_1:55073119-55073138 | Msa0029700:CDS | 15.0% |
| !! | AATAAATATAATCAGAAGAA+TGG | + | chr1_1:55074614-55074633 | Msa0029700:three_prime_UTR | 15.0% |
| !!! | TGTTTTGTGTTTTTTTGATA+TGG | - | chr1_1:55070472-55070491 | None:intergenic | 20.0% |
| !! | ATTATTGTTAAGATAGAACA+AGG | - | chr1_1:55070556-55070575 | None:intergenic | 20.0% |
| !!! | TATGAAGCTATTTTCAATAA+AGG | + | chr1_1:55070622-55070641 | Msa0029700:five_prime_UTR | 20.0% |
| !!! | ATGAAGCTATTTTCAATAAA+GGG | + | chr1_1:55070623-55070642 | Msa0029700:five_prime_UTR | 20.0% |
| !! | AAAGTAATGAACTTTGTTAA+TGG | + | chr1_1:55070786-55070805 | Msa0029700:five_prime_UTR | 20.0% |
| !! | AAGTAATGAACTTTGTTAAT+GGG | + | chr1_1:55070787-55070806 | Msa0029700:five_prime_UTR | 20.0% |
| !!! | TGTATAATTTTTTTTAGGTG+GGG | + | chr1_1:55070987-55071006 | Msa0029700:intron | 20.0% |
| !! | GTATTAAACTTAGAAATTGT+TGG | + | chr1_1:55071020-55071039 | Msa0029700:intron | 20.0% |
| !! | AATAACTTAAGTTATCTTTG+GGG | + | chr1_1:55071428-55071447 | Msa0029700:five_prime_UTR | 20.0% |
| !!! | TTACGTGTTTGTAATTTTAA+AGG | + | chr1_1:55072350-55072369 | Msa0029700:CDS | 20.0% |
| !!! | GTAAATATTAGATTTGAGAT+AGG | + | chr1_1:55073118-55073137 | Msa0029700:CDS | 20.0% |
| !!! | AGTTACATTGTTTGTTATAT+GGG | + | chr1_1:55073265-55073284 | Msa0029700:intron | 20.0% |
| !!! | TGTAGTTTTTAATTTTGCTT+AGG | + | chr1_1:55073675-55073694 | Msa0029700:intron | 20.0% |
| !! | AAAAATTAACTCAGAATACA+AGG | - | chr1_1:55073737-55073756 | None:intergenic | 20.0% |
| !! | GAAATTAAGTAATCAAATCA+AGG | - | chr1_1:55073766-55073785 | None:intergenic | 20.0% |
| ! | TTCATAAGCTAGAATTTCAT+AGG | - | chr1_1:55070608-55070627 | None:intergenic | 25.0% |
| !!! | CTTGTTGCTTTATTTTTTTC+AGG | + | chr1_1:55070914-55070933 | Msa0029700:five_prime_UTR | 25.0% |
| !!! | TTCAGGTACTATTTCTTTTT+TGG | + | chr1_1:55070931-55070950 | Msa0029700:intron | 25.0% |
| !!! | GTATAATTTTTTTTAGGTGG+GGG | + | chr1_1:55070988-55071007 | Msa0029700:intron | 25.0% |
| !!! | ATTGCTTTTATAGTACTATG+TGG | + | chr1_1:55071768-55071787 | Msa0029700:CDS | 25.0% |
| ! | TACTATTCTGTATACTACTT+TGG | + | chr1_1:55072073-55072092 | Msa0029700:CDS | 25.0% |
| ! | TCCAGATGTTGTAAAAATTA+AGG | + | chr1_1:55072223-55072242 | Msa0029700:CDS | 25.0% |
| ! | CCAGATGTTGTAAAAATTAA+GGG | + | chr1_1:55072224-55072243 | Msa0029700:CDS | 25.0% |
| ! | AAATTACAAACACGTAACAT+TGG | - | chr1_1:55072347-55072366 | None:intergenic | 25.0% |
| ! | CATCATTTATCAAGTTTGAA+AGG | - | chr1_1:55072760-55072779 | None:intergenic | 25.0% |
| ! | AAATGCATGTGTGTTTATAA+GGG | + | chr1_1:55072875-55072894 | Msa0029700:CDS | 25.0% |
| !!! | GAGTTACATTGTTTGTTATA+TGG | + | chr1_1:55073264-55073283 | Msa0029700:intron | 25.0% |
| ! | GCAAGGAAATATTTGAAAAA+TGG | + | chr1_1:55074328-55074347 | Msa0029700:exon | 25.0% |
| ! | GGAAATATTTGAAAAATGGA+TGG | + | chr1_1:55074332-55074351 | Msa0029700:exon | 25.0% |
| CTCTCTCAAAACTAAAACAA+CGG | + | chr1_1:55070384-55070403 | Msa0029700:five_prime_UTR | 30.0% | |
| ! | TCTTCTTTTCTTCATATACG+TGG | + | chr1_1:55070418-55070437 | Msa0029700:five_prime_UTR | 30.0% |
| !!! | GTGTTTTTTTGATATGGCAA+AGG | - | chr1_1:55070466-55070485 | None:intergenic | 30.0% |
| !!! | GTTTTGAGAATGTTAAGGTT+TGG | - | chr1_1:55070508-55070527 | None:intergenic | 30.0% |
| ! | TGAAGAGAAAATGAAAGTGT+TGG | - | chr1_1:55070533-55070552 | None:intergenic | 30.0% |
| TGATTTGATGCTAAAGAAAG+TGG | + | chr1_1:55070816-55070835 | Msa0029700:five_prime_UTR | 30.0% | |
| ACTTAGAAATTGTTGGACTT+TGG | + | chr1_1:55071027-55071046 | Msa0029700:intron | 30.0% | |
| CATCAGGTTTAGTATTATCT+TGG | + | chr1_1:55071083-55071102 | Msa0029700:intron | 30.0% | |
| TTCTATGGTATATGTGTTGA+TGG | + | chr1_1:55071128-55071147 | Msa0029700:intron | 30.0% | |
| !!! | TTTGTTTTTGAACTGTTGAC+AGG | + | chr1_1:55071359-55071378 | Msa0029700:intron | 30.0% |
| !!! | TTGTTTTTGAACTGTTGACA+GGG | + | chr1_1:55071360-55071379 | Msa0029700:intron | 30.0% |
| ATAATCAATTTCTACCAGTC+TGG | - | chr1_1:55071386-55071405 | None:intergenic | 30.0% | |
| TCATCATCACAATTACATCT+AGG | - | chr1_1:55071600-55071619 | None:intergenic | 30.0% | |
| TAAAAGCAATGAACTGAACA+AGG | - | chr1_1:55071758-55071777 | None:intergenic | 30.0% | |
| !! | TGGTCTTATTATGAAGCAAA+AGG | + | chr1_1:55071992-55072011 | Msa0029700:CDS | 30.0% |
| TCTTATTATGAAGCAAAAGG+AGG | + | chr1_1:55071995-55072014 | Msa0029700:CDS | 30.0% | |
| TATTCTGTATACTACTTTGG+TGG | + | chr1_1:55072076-55072095 | Msa0029700:CDS | 30.0% | |
| ! | ATCACTGTCTTTTCTTCATT+TGG | - | chr1_1:55072146-55072165 | None:intergenic | 30.0% |
| ! | CCCTTAATTTTTACAACATC+TGG | - | chr1_1:55072227-55072246 | None:intergenic | 30.0% |
| GTAAAAATTAAGGGAAGCAA+TGG | + | chr1_1:55072233-55072252 | Msa0029700:CDS | 30.0% | |
| !! | CGTGTTTGTAATTTTAAAGG+AGG | + | chr1_1:55072353-55072372 | Msa0029700:CDS | 30.0% |
| AAACTTGATAAATGATGCCA+TGG | + | chr1_1:55072763-55072782 | Msa0029700:CDS | 30.0% | |
| CTTATAAACACACATGCATT+TGG | - | chr1_1:55072876-55072895 | None:intergenic | 30.0% | |
| CAAATGCATGTGTGTTTATA+AGG | + | chr1_1:55072874-55072893 | Msa0029700:CDS | 30.0% | |
| TCTTTACCAAACCATGTTAT+GGG | + | chr1_1:55072926-55072945 | Msa0029700:CDS | 30.0% | |
| !!! | TTTTCAGGTGATTTTGCATA+TGG | + | chr1_1:55072964-55072983 | Msa0029700:CDS | 30.0% |
| ATATACCAGTGATAGATATG+AGG | + | chr1_1:55073201-55073220 | Msa0029700:CDS | 30.0% | |
| TATACCAGTGATAGATATGA+GGG | + | chr1_1:55073202-55073221 | Msa0029700:CDS | 30.0% | |
| !! | TTGTTTGTTATATGGGTTCA+TGG | + | chr1_1:55073272-55073291 | Msa0029700:intron | 30.0% |
| ATGTCACACAAACAATGAAA+AGG | - | chr1_1:55073393-55073412 | None:intergenic | 30.0% | |
| GTGACATAAATAGCTGAATT+TGG | + | chr1_1:55073406-55073425 | Msa0029700:intron | 30.0% | |
| AACATATTCCACAGTATTCA+AGG | - | chr1_1:55073474-55073493 | None:intergenic | 30.0% | |
| TAATGCGTGTTCGATATATT+TGG | + | chr1_1:55073631-55073650 | Msa0029700:intron | 30.0% | |
| TTCTTCTTCGGTTTCAATTA+CGG | + | chr1_1:55073868-55073887 | Msa0029700:CDS | 30.0% | |
| TATTCCAATTCAATGTTGAG+AGG | + | chr1_1:55073942-55073961 | Msa0029700:CDS | 30.0% | |
| ! | TTCCATTCAAGTCATTCTTT+TGG | + | chr1_1:55074100-55074119 | Msa0029700:CDS | 30.0% |
| ATCCAAAAGAATGACTTGAA+TGG | - | chr1_1:55074105-55074124 | None:intergenic | 30.0% | |
| TTATAGAACACAGTTCTCTT+TGG | + | chr1_1:55074433-55074452 | Msa0029700:three_prime_UTR | 30.0% | |
| !!! | TGGTGGTTTTGAGAATGTTA+AGG | - | chr1_1:55070513-55070532 | None:intergenic | 35.0% |
| !! | AGAGAAAATGAAAGTGTTGG+TGG | - | chr1_1:55070530-55070549 | None:intergenic | 35.0% |
| ! | TCTCTTTTCCAATGACAAGA+AGG | + | chr1_1:55070732-55070751 | Msa0029700:five_prime_UTR | 35.0% |
| ! | TTTTCCAATGACAAGAAGGT+GGG | + | chr1_1:55070736-55070755 | Msa0029700:five_prime_UTR | 35.0% |
| ! | GATCTTAACAAAGCTTTGTC+AGG | - | chr1_1:55070877-55070896 | None:intergenic | 35.0% |
| ! | GCTTTGTTAAGATCTGATCA+AGG | + | chr1_1:55070883-55070902 | Msa0029700:five_prime_UTR | 35.0% |
| TTGTTAAGATCTGATCAAGG+TGG | + | chr1_1:55070886-55070905 | Msa0029700:five_prime_UTR | 35.0% | |
| !!! | TTTTTTTAGGTGGGGGATTA+AGG | + | chr1_1:55070995-55071014 | Msa0029700:intron | 35.0% |
| !!! | TTTTTTAGGTGGGGGATTAA+GGG | + | chr1_1:55070996-55071015 | Msa0029700:intron | 35.0% |
| ! | TATGGTATATGTGTTGATGG+TGG | + | chr1_1:55071131-55071150 | Msa0029700:intron | 35.0% |
| GTTATATCCTCTGTATCAGT+TGG | + | chr1_1:55071153-55071172 | Msa0029700:intron | 35.0% | |
| TTTATTCCAGTCTATACCCT+AGG | + | chr1_1:55071194-55071213 | Msa0029700:intron | 35.0% | |
| TTTCAGTCAACATAGACCTA+GGG | - | chr1_1:55071213-55071232 | None:intergenic | 35.0% | |
| ! | TTATCTTTGGGGAATGACTA+TGG | + | chr1_1:55071439-55071458 | Msa0029700:five_prime_UTR | 35.0% |
| CTGATTCTTCAATCCATCTA+AGG | - | chr1_1:55071484-55071503 | None:intergenic | 35.0% | |
| TTGAAGAATCAGCAGCATAT+TGG | + | chr1_1:55071492-55071511 | Msa0029700:five_prime_UTR | 35.0% | |
| !!! | GTGGACTATTGAGAGTATTT+TGG | + | chr1_1:55071629-55071648 | Msa0029700:CDS | 35.0% |
| !!! | ATTTTGGAGTGTCAAAGAGT+TGG | + | chr1_1:55071645-55071664 | Msa0029700:CDS | 35.0% |
| CGAAATAAAGCAACTCAAGA+GGG | - | chr1_1:55071704-55071723 | None:intergenic | 35.0% | |
| ACGAAATAAAGCAACTCAAG+AGG | - | chr1_1:55071705-55071724 | None:intergenic | 35.0% | |
| ! | GGATTGACACATTTTCTGAA+TGG | + | chr1_1:55071789-55071808 | Msa0029700:CDS | 35.0% |
| ! | TGACACATTTTCTGAATGGT+TGG | + | chr1_1:55071793-55071812 | Msa0029700:CDS | 35.0% |
| TTTCTGAATGGTTGGACTTA+TGG | + | chr1_1:55071801-55071820 | Msa0029700:CDS | 35.0% | |
| TCATGCTCAAGAAAAAGACA+TGG | + | chr1_1:55071952-55071971 | Msa0029700:CDS | 35.0% | |
| CATGCTCAAGAAAAAGACAT+GGG | + | chr1_1:55071953-55071972 | Msa0029700:CDS | 35.0% | |
| AAGAAAAAGACATGGGATCT+TGG | + | chr1_1:55071960-55071979 | Msa0029700:CDS | 35.0% | |
| GAATGCTTACTCAAGAGATT+CGG | + | chr1_1:55072033-55072052 | Msa0029700:CDS | 35.0% | |
| CAGAATAGTATGTCTATCGA+GGG | - | chr1_1:55072063-55072082 | None:intergenic | 35.0% | |
| ACAGAATAGTATGTCTATCG+AGG | - | chr1_1:55072064-55072083 | None:intergenic | 35.0% | |
| ACAACATCTGGATCAGTAAT+CGG | - | chr1_1:55072215-55072234 | None:intergenic | 35.0% | |
| !! | CATATTGGTCTTGATTCTTC+CGG | + | chr1_1:55072406-55072425 | Msa0029700:CDS | 35.0% |
| TCAACTTATGAGAGAGAAGT+TGG | + | chr1_1:55072532-55072551 | Msa0029700:CDS | 35.0% | |
| TTTCAGAAAGTCATGAGTGA+TGG | + | chr1_1:55072623-55072642 | Msa0029700:CDS | 35.0% | |
| GAATGAACAGAAGCTTATTG+TGG | + | chr1_1:55072709-55072728 | Msa0029700:CDS | 35.0% | |
| ! | GAAGATTTCCTTTGGAGATA+AGG | + | chr1_1:55072807-55072826 | Msa0029700:CDS | 35.0% |
| !! | CTTTGGAGATAAGGTCTTTT+GGG | + | chr1_1:55072816-55072835 | Msa0029700:CDS | 35.0% |
| ATGTGTGTTTATAAGGGCTT+GGG | + | chr1_1:55072881-55072900 | Msa0029700:CDS | 35.0% | |
| GTCTTTACCAAACCATGTTA+TGG | + | chr1_1:55072925-55072944 | Msa0029700:CDS | 35.0% | |
| ! | AGGTGATTTTGCATATGGTT+GGG | + | chr1_1:55072969-55072988 | Msa0029700:CDS | 35.0% |
| AATCTACTGGATTGTAACCA+TGG | + | chr1_1:55072992-55073011 | Msa0029700:CDS | 35.0% | |
| ATCTACTGGATTGTAACCAT+GGG | + | chr1_1:55072993-55073012 | Msa0029700:CDS | 35.0% | |
| !! | GATCCTAGTATTTCGAGTTT+CGG | + | chr1_1:55073024-55073043 | Msa0029700:CDS | 35.0% |
| !! | AACAGTAGTGATTCTGAAGT+TGG | + | chr1_1:55073145-55073164 | Msa0029700:CDS | 35.0% |
| ! | TGAGCTTTAGTATTTGCAAG+AGG | + | chr1_1:55073230-55073249 | Msa0029700:CDS | 35.0% |
| AACAAACAATGTAACTCACC+TGG | - | chr1_1:55073261-55073280 | None:intergenic | 35.0% | |
| ACATCTTGCGAAACTGAATT+TGG | + | chr1_1:55073350-55073369 | Msa0029700:intron | 35.0% | |
| ! | TGTGTTTTCCTTGAATACTG+TGG | + | chr1_1:55073463-55073482 | Msa0029700:intron | 35.0% |
| AGGATTCTAACTAACATCAC+AGG | - | chr1_1:55073542-55073561 | None:intergenic | 35.0% | |
| ! | TGCTCTTATGATGGGAAAAT+AGG | - | chr1_1:55073562-55073581 | None:intergenic | 35.0% |
| ! | TCCAGATTTGCTCTTATGAT+GGG | - | chr1_1:55073570-55073589 | None:intergenic | 35.0% |
| ! | TTCCAGATTTGCTCTTATGA+TGG | - | chr1_1:55073571-55073590 | None:intergenic | 35.0% |
| ! | CATAAGAGCAAATCTGGAAT+CGG | + | chr1_1:55073572-55073591 | Msa0029700:intron | 35.0% |
| ! | ATCTGGAATCGGAATGTTAT+TGG | + | chr1_1:55073583-55073602 | Msa0029700:intron | 35.0% |
| !! | GTTATTGGTGTTGTATCTCT+AGG | + | chr1_1:55073598-55073617 | Msa0029700:intron | 35.0% |
| ! | TGTTAATTGCAGTTGATGCA+AGG | + | chr1_1:55073795-55073814 | Msa0029700:intron | 35.0% |
| ! | AGTTGATGCAAGGAAACTTA+TGG | + | chr1_1:55073805-55073824 | Msa0029700:intron | 35.0% |
| AAAGCATGACACTTCTTCTT+CGG | + | chr1_1:55073856-55073875 | Msa0029700:CDS | 35.0% | |
| CAAAAACTGCTTCAGAAACT+AGG | + | chr1_1:55074014-55074033 | Msa0029700:CDS | 35.0% | |
| TTTGAATGCCTTACTGTCAT+TGG | + | chr1_1:55074065-55074084 | Msa0029700:CDS | 35.0% | |
| ATCCATCTATATCAGGCATT+TGG | - | chr1_1:55074130-55074149 | None:intergenic | 35.0% | |
| ACTTCGAATCCATCTATATC+AGG | - | chr1_1:55074137-55074156 | None:intergenic | 35.0% | |
| TTTAAACTTCCGAATCCTTG+CGG | - | chr1_1:55074162-55074181 | None:intergenic | 35.0% | |
| AGGATTCGGAAGTTTAAAAG+CGG | + | chr1_1:55074164-55074183 | Msa0029700:CDS | 35.0% | |
| GGAAGTTTAAAAGCGGAAAT+AGG | + | chr1_1:55074171-55074190 | Msa0029700:CDS | 35.0% | |
| AAGTGCAGAAGAAGATTTGT+GGG | + | chr1_1:55074217-55074236 | Msa0029700:CDS | 35.0% | |
| !! | TGTATGCAGATTGGTGTTAA+TGG | + | chr1_1:55074245-55074264 | Msa0029700:CDS | 35.0% |
| TAATGGAGTAATCCGAAAAC+CGG | + | chr1_1:55074262-55074281 | Msa0029700:CDS | 35.0% | |
| CTCAAAAGAATTCTGATGCA+AGG | + | chr1_1:55074311-55074330 | Msa0029700:CDS | 35.0% | |
| TGAAGTCTCATTCTTGTTCT+TGG | + | chr1_1:55074403-55074422 | Msa0029700:three_prime_UTR | 35.0% | |
| TTATGTATGACATCTCTACG+TGG | - | chr1_1:55074480-55074499 | None:intergenic | 35.0% | |
| TTACTGTGGAAGAGATTCTG+CGG | - | chr1_1:55070666-55070685 | None:intergenic | 40.0% | |
| ! | CTTTTCCAATGACAAGAAGG+TGG | + | chr1_1:55070735-55070754 | Msa0029700:five_prime_UTR | 40.0% |
| !! | TCTTGGATTTGGCTTTCATC+AGG | + | chr1_1:55071067-55071086 | Msa0029700:intron | 40.0% |
| GTTTCAGTCAACATAGACCT+AGG | - | chr1_1:55071214-55071233 | None:intergenic | 40.0% | |
| ! | GGTCTATGTTGACTGAAACT+AGG | + | chr1_1:55071215-55071234 | Msa0029700:intron | 40.0% |
| TCAGCAGCATATTGGATCAA+TGG | + | chr1_1:55071500-55071519 | Msa0029700:exon | 40.0% | |
| AGATACACACAAGAGGATAG+AGG | - | chr1_1:55071556-55071575 | None:intergenic | 40.0% | |
| TTGTTGCAGATACACACAAG+AGG | - | chr1_1:55071563-55071582 | None:intergenic | 40.0% | |
| ! | GTGATGATGAGAACAGTTTG+TGG | + | chr1_1:55071610-55071629 | Msa0029700:CDS | 40.0% |
| TGGTGATTTCTTGATTGCTG+TGG | + | chr1_1:55071665-55071684 | Msa0029700:CDS | 40.0% | |
| GAACAAGGACCCATTTGAAA+GGG | - | chr1_1:55071743-55071762 | None:intergenic | 40.0% | |
| TGAACAAGGACCCATTTGAA+AGG | - | chr1_1:55071744-55071763 | None:intergenic | 40.0% | |
| ! | TCCTCACACTTTTCAGCTTA+TGG | + | chr1_1:55071824-55071843 | Msa0029700:CDS | 40.0% |
| ! | ACCATAAGCTGAAAAGTGTG+AGG | - | chr1_1:55071828-55071847 | None:intergenic | 40.0% |
| ! | TCACACTTTTCAGCTTATGG+TGG | + | chr1_1:55071827-55071846 | Msa0029700:CDS | 40.0% |
| GGCAGTGAGAATCTTAAAGA+TGG | - | chr1_1:55071859-55071878 | None:intergenic | 40.0% | |
| !! | CTTTAAGATTCTCACTGCCT+TGG | + | chr1_1:55071860-55071879 | Msa0029700:CDS | 40.0% |
| TCCTTTGCTTCTCAAAGTGA+AGG | + | chr1_1:55071920-55071939 | Msa0029700:CDS | 40.0% | |
| ! | ACCTTCACTTTGAGAAGCAA+AGG | - | chr1_1:55071924-55071943 | None:intergenic | 40.0% |
| AAAAGACATGGGATCTTGGA+CGG | + | chr1_1:55071964-55071983 | Msa0029700:CDS | 40.0% | |
| GTGGAGCTTTCGAAAACATT+AGG | + | chr1_1:55072095-55072114 | Msa0029700:CDS | 40.0% | |
| GTTTGCAAAATTGTGCTGTG+TGG | + | chr1_1:55072117-55072136 | Msa0029700:CDS | 40.0% | |
| TCACTCATGAATTGAACGCA+AGG | + | chr1_1:55072171-55072190 | Msa0029700:CDS | 40.0% | |
| ACGTAACATTGGCATTCGAA+TGG | - | chr1_1:55072336-55072355 | None:intergenic | 40.0% | |
| !! | TCAGGCTTGTTATGCCATAT+TGG | + | chr1_1:55072391-55072410 | Msa0029700:CDS | 40.0% |
| CGGAAGAATCAAGACCAATA+TGG | - | chr1_1:55072408-55072427 | None:intergenic | 40.0% | |
| TCAGGAGCTGGAGATAATTA+AGG | + | chr1_1:55072454-55072473 | Msa0029700:CDS | 40.0% | |
| AATTAAGGTGGTTGCTGATC+AGG | + | chr1_1:55072469-55072488 | Msa0029700:CDS | 40.0% | |
| ! | TCTGAAATGAGTTTCTTGCC+TGG | - | chr1_1:55072610-55072629 | None:intergenic | 40.0% |
| AAGTCATGAGTGATGGTATG+AGG | + | chr1_1:55072630-55072649 | Msa0029700:CDS | 40.0% | |
| AATCCCAAAATCGAGTGCAT+AGG | - | chr1_1:55072659-55072678 | None:intergenic | 40.0% | |
| !! | GGATGATGGAAGATTTCCTT+TGG | + | chr1_1:55072799-55072818 | Msa0029700:CDS | 40.0% |
| CCAAAAGACCTTATCTCCAA+AGG | - | chr1_1:55072818-55072837 | None:intergenic | 40.0% | |
| !! | CCTTTGGAGATAAGGTCTTT+TGG | + | chr1_1:55072815-55072834 | Msa0029700:CDS | 40.0% |
| AAACACACATGCATTTGGCA+AGG | - | chr1_1:55072871-55072890 | None:intergenic | 40.0% | |
| CATGTGTGTTTATAAGGGCT+TGG | + | chr1_1:55072880-55072899 | Msa0029700:CDS | 40.0% | |
| ! | TTATAAGGGCTTGGGTTTTG+TGG | + | chr1_1:55072889-55072908 | Msa0029700:CDS | 40.0% |
| TCATCACCCATAACATGGTT+TGG | - | chr1_1:55072935-55072954 | None:intergenic | 40.0% | |
| ! | CAGGTGATTTTGCATATGGT+TGG | + | chr1_1:55072968-55072987 | Msa0029700:CDS | 40.0% |
| TCTACTGGATTGTAACCATG+GGG | + | chr1_1:55072994-55073013 | Msa0029700:CDS | 40.0% | |
| AGTCAAGGGAGGAATGAAAA+AGG | + | chr1_1:55073058-55073077 | Msa0029700:CDS | 40.0% | |
| AAGGGAGGAATGAAAAAGGA+TGG | + | chr1_1:55073062-55073081 | Msa0029700:CDS | 40.0% | |
| AGGGAGGAATGAAAAAGGAT+GGG | + | chr1_1:55073063-55073082 | Msa0029700:CDS | 40.0% | |
| TATTTGCAAGAGGATAGTCC+AGG | + | chr1_1:55073240-55073259 | Msa0029700:CDS | 40.0% | |
| TCCCATCATAAGAGCAAATC+TGG | + | chr1_1:55073566-55073585 | Msa0029700:intron | 40.0% | |
| TAACAGTACAACGCATAGCT+TGG | - | chr1_1:55073703-55073722 | None:intergenic | 40.0% | |
| GATGCAAGGAAACTTATGGT+TGG | + | chr1_1:55073809-55073828 | Msa0029700:CDS | 40.0% | |
| ! | TGGTTGGTACCATATACTCA+CGG | + | chr1_1:55073825-55073844 | Msa0029700:CDS | 40.0% |
| TGAGGAATACCGTGAGTATA+TGG | - | chr1_1:55073837-55073856 | None:intergenic | 40.0% | |
| !! | AGAAGAAGTGTCATGCTTTG+AGG | - | chr1_1:55073855-55073874 | None:intergenic | 40.0% |
| TTCAGAGATGGCTATTGCAA+TGG | - | chr1_1:55073898-55073917 | None:intergenic | 40.0% | |
| CAGACCTCTCAACATTGAAT+TGG | - | chr1_1:55073949-55073968 | None:intergenic | 40.0% | |
| ACTTGAATGGAAGATCCAAC+AGG | - | chr1_1:55074092-55074111 | None:intergenic | 40.0% | |
| CTCCAAATGCCTGATATAGA+TGG | + | chr1_1:55074125-55074144 | Msa0029700:CDS | 40.0% | |
| GCAGTCAAGGCAACAATTAT+AGG | - | chr1_1:55074197-55074216 | None:intergenic | 40.0% | |
| CAAGTGCAGAAGAAGATTTG+TGG | + | chr1_1:55074216-55074235 | Msa0029700:CDS | 40.0% | |
| TGGGAAAGATGTATGCAGAT+TGG | + | chr1_1:55074236-55074255 | Msa0029700:CDS | 40.0% | |
| !! | CTTGCATCAAAACCGGTTTT+CGG | - | chr1_1:55074277-55074296 | None:intergenic | 40.0% |
| GCAATTCCTTGCATCAAAAC+CGG | - | chr1_1:55074284-55074303 | None:intergenic | 40.0% | |
| ! | TACGTGGAAAATTGGTAGCA+AGG | - | chr1_1:55074464-55074483 | None:intergenic | 40.0% |
| GACATCTCTACGTGGAAAAT+TGG | - | chr1_1:55074472-55074491 | None:intergenic | 40.0% | |
| TTTCAATAAAGGGTCGCACC+CGG | + | chr1_1:55070633-55070652 | Msa0029700:five_prime_UTR | 45.0% | |
| GACAGTACCAACTGATACAG+AGG | - | chr1_1:55071163-55071182 | None:intergenic | 45.0% | |
| CATAGACCTAGGGTATAGAC+TGG | - | chr1_1:55071203-55071222 | None:intergenic | 45.0% | |
| CTCAAGAGGGATTGAGAAGT+AGG | - | chr1_1:55071691-55071710 | None:intergenic | 45.0% | |
| CTCGAACGTCCCTTTCAAAT+GGG | + | chr1_1:55071731-55071750 | Msa0029700:CDS | 45.0% | |
| TGCTTCTCAAAGTGAAGGTC+AGG | + | chr1_1:55071925-55071944 | Msa0029700:CDS | 45.0% | |
| GCTTCTCAAAGTGAAGGTCA+GGG | + | chr1_1:55071926-55071945 | Msa0029700:CDS | 45.0% | |
| AAAGACATGGGATCTTGGAC+GGG | + | chr1_1:55071965-55071984 | Msa0029700:CDS | 45.0% | |
| GTCACTAGAAACACCAAGAC+TGG | - | chr1_1:55072297-55072316 | None:intergenic | 45.0% | |
| TAACAAGCCTGAGTTAGCTC+AGG | - | chr1_1:55072383-55072402 | None:intergenic | 45.0% | |
| GCTCCAAGATCTAGGTTCTT+CGG | - | chr1_1:55072432-55072451 | None:intergenic | 45.0% | |
| ACCTAGATCTTGGAGCAATC+AGG | + | chr1_1:55072436-55072455 | Msa0029700:CDS | 45.0% | |
| TCCTGATTGCTCCAAGATCT+AGG | - | chr1_1:55072440-55072459 | None:intergenic | 45.0% | |
| GGAGCTGGAGATAATTAAGG+TGG | + | chr1_1:55072457-55072476 | Msa0029700:CDS | 45.0% | |
| TCATGAGTGATGGTATGAGG+AGG | + | chr1_1:55072633-55072652 | Msa0029700:CDS | 45.0% | |
| ! | AGGCCTATGCACTCGATTTT+GGG | + | chr1_1:55072653-55072672 | Msa0029700:CDS | 45.0% |
| ! | GCACGCTGCTTCTTTTATCA+TGG | - | chr1_1:55072849-55072868 | None:intergenic | 45.0% |
| ACCATGTTATGGGTGATGAG+AGG | + | chr1_1:55072936-55072955 | Msa0029700:CDS | 45.0% | |
| TCCTCTCATCACCCATAACA+TGG | - | chr1_1:55072940-55072959 | None:intergenic | 45.0% | |
| ATGTTATGGGTGATGAGAGG+AGG | + | chr1_1:55072939-55072958 | Msa0029700:CDS | 45.0% | |
| TGTTATGGGTGATGAGAGGA+GGG | + | chr1_1:55072940-55072959 | Msa0029700:CDS | 45.0% | |
| ! | TGATGAGAGGAGGGTTTTTC+AGG | + | chr1_1:55072949-55072968 | Msa0029700:CDS | 45.0% |
| GCATATGGTTGGGAATCTAC+TGG | + | chr1_1:55072979-55072998 | Msa0029700:CDS | 45.0% | |
| TGGATTGTAACCATGGGGAA+GGG | + | chr1_1:55072999-55073018 | Msa0029700:CDS | 45.0% | |
| CTGCCGAAACTCGAAATACT+AGG | - | chr1_1:55073030-55073049 | None:intergenic | 45.0% | |
| ATGAAAAAGGATGGGCAACC+TGG | + | chr1_1:55073071-55073090 | Msa0029700:CDS | 45.0% | |
| ACATCACCACTAGATGAGCT+TGG | - | chr1_1:55073100-55073119 | None:intergenic | 45.0% | |
| TCTGCCCTCATATCTATCAC+TGG | - | chr1_1:55073209-55073228 | None:intergenic | 45.0% | |
| GAGATGGCTATTGCAATGGA+AGG | - | chr1_1:55073894-55073913 | None:intergenic | 45.0% | |
| GCATTCAAATCCCGTAGAAG+CGG | - | chr1_1:55074054-55074073 | None:intergenic | 45.0% | |
| CAACAGGTCCAATGACAGTA+AGG | - | chr1_1:55074076-55074095 | None:intergenic | 45.0% | |
| CTTACTGTCATTGGACCTGT+TGG | + | chr1_1:55074074-55074093 | Msa0029700:CDS | 45.0% | |
| TTCTTCTGCACTTGCAGTCA+AGG | - | chr1_1:55074210-55074229 | None:intergenic | 45.0% | |
| !! | CGAAAACCGGTTTTGATGCA+AGG | + | chr1_1:55074275-55074294 | Msa0029700:CDS | 45.0% |
| !!! | TTTATTGTATAATTTTTTTT+AGG | + | chr1_1:55070982-55071001 | Msa0029700:intron | 5.0% |
| !!! | TTTTTTTTAATATTATTTCT+TGG | + | chr1_1:55071050-55071069 | Msa0029700:intron | 5.0% |
| TGCACCCACCTTCTTGTCAT+TGG | - | chr1_1:55070743-55070762 | None:intergenic | 50.0% | |
| GCTCGAACGTCCCTTTCAAA+TGG | + | chr1_1:55071730-55071749 | Msa0029700:CDS | 50.0% | |
| !! | CTTGGTGTTTCTAGTGACGC+AGG | + | chr1_1:55072299-55072318 | Msa0029700:CDS | 50.0% |
| !! | TGTTTCTAGTGACGCAGGAC+CGG | + | chr1_1:55072304-55072323 | Msa0029700:CDS | 50.0% |
| AGGAACACCTGAGCTAACTC+AGG | + | chr1_1:55072373-55072392 | Msa0029700:CDS | 50.0% | |
| CAAGATCTAGGTTCTTCGGC+CGG | - | chr1_1:55072428-55072447 | None:intergenic | 50.0% | |
| ATCTTGGAGCAATCAGGAGC+TGG | + | chr1_1:55072442-55072461 | Msa0029700:CDS | 50.0% | |
| GGCGAGAAGGAATGCTATGA+TGG | + | chr1_1:55072580-55072599 | Msa0029700:CDS | 50.0% | |
| GAATGCTATGATGGCAAGCC+AGG | + | chr1_1:55072589-55072608 | Msa0029700:CDS | 50.0% | |
| ! | GAGGCCTATGCACTCGATTT+TGG | + | chr1_1:55072652-55072671 | Msa0029700:CDS | 50.0% |
| ATCCTTTGCAGAGCTGTCCA+TGG | - | chr1_1:55072783-55072802 | None:intergenic | 50.0% | |
| GACAGCTCTGCAAAGGATGA+TGG | + | chr1_1:55072785-55072804 | Msa0029700:CDS | 50.0% | |
| CTGGATTGTAACCATGGGGA+AGG | + | chr1_1:55072998-55073017 | Msa0029700:CDS | 50.0% | |
| GGATTGTAACCATGGGGAAG+GGG | + | chr1_1:55073000-55073019 | Msa0029700:CDS | 50.0% | |
| GATTGTAACCATGGGGAAGG+GGG | + | chr1_1:55073001-55073020 | Msa0029700:CDS | 50.0% | |
| ATTGTAACCATGGGGAAGGG+GGG | + | chr1_1:55073002-55073021 | Msa0029700:CDS | 50.0% | |
| ACTAGATGAGCTTGGTCTCC+AGG | - | chr1_1:55073092-55073111 | None:intergenic | 50.0% | |
| TGGAGACCAAGCTCATCTAG+TGG | + | chr1_1:55073091-55073110 | Msa0029700:CDS | 50.0% | |
| ACTGGTATATGTCCTACCCC+CGG | - | chr1_1:55073191-55073210 | None:intergenic | 50.0% | |
| GCAATAGCCATCTCTGAACC+CGG | + | chr1_1:55073900-55073919 | Msa0029700:CDS | 50.0% | |
| CAATAGCCATCTCTGAACCC+GGG | + | chr1_1:55073901-55073920 | Msa0029700:CDS | 50.0% | |
| AATAGCCATCTCTGAACCCG+GGG | + | chr1_1:55073902-55073921 | Msa0029700:CDS | 50.0% | |
| !! | TTGCGTTCTGAAGATTCCCC+GGG | - | chr1_1:55073921-55073940 | None:intergenic | 50.0% |
| !! | GTTGCGTTCTGAAGATTCCC+CGG | - | chr1_1:55073922-55073941 | None:intergenic | 50.0% |
| GAGAGGTCTGCAAGTTCTGT+TGG | + | chr1_1:55073959-55073978 | Msa0029700:CDS | 50.0% | |
| TTCCGTGACTTCCGCTTCTA+CGG | + | chr1_1:55074040-55074059 | Msa0029700:CDS | 50.0% | |
| AGATTCTGCGGCACGAAACC+GGG | - | chr1_1:55070654-55070673 | None:intergenic | 55.0% | |
| GAGATTCTGCGGCACGAAAC+CGG | - | chr1_1:55070655-55070674 | None:intergenic | 55.0% | |
| AACTGTTGACAGGGCCAGAC+TGG | + | chr1_1:55071369-55071388 | Msa0029700:intron | 55.0% | |
| CGCAGTTGCACAAGACACCA+AGG | - | chr1_1:55071880-55071899 | None:intergenic | 55.0% | |
| !! | GCGCTTGCTGTTTCCAGTCT+TGG | + | chr1_1:55072281-55072300 | Msa0029700:CDS | 55.0% |
| GGCATTCGAATGGCAGCAAC+CGG | - | chr1_1:55072326-55072345 | None:intergenic | 55.0% | |
| CGGCCGAAGAACCTAGATCT+TGG | + | chr1_1:55072426-55072445 | Msa0029700:CDS | 55.0% | |
| TGCAGCATGCGATAGAGCCA+CGG | - | chr1_1:55072498-55072517 | None:intergenic | 55.0% | |
| GCGCAATCGAGCTTTGCAAC+TGG | + | chr1_1:55072559-55072578 | Msa0029700:CDS | 55.0% | |
| GAGCTTTGCAACTGGCGAGA+AGG | + | chr1_1:55072567-55072586 | Msa0029700:CDS | 55.0% | |
| TGCCATGGACAGCTCTGCAA+AGG | + | chr1_1:55072778-55072797 | Msa0029700:CDS | 55.0% | |
| !! | GGGCTTGGGTTTTGTGGTTG+AGG | + | chr1_1:55072895-55072914 | Msa0029700:CDS | 55.0% |
| !! | TTTCGAGTTTCGGCAGACGC+TGG | + | chr1_1:55073034-55073053 | Msa0029700:CDS | 55.0% |
| CTGGTATATGTCCTACCCCC+GGG | - | chr1_1:55073190-55073209 | None:intergenic | 55.0% | |
| AGATTCCCCGGGTTCAGAGA+TGG | - | chr1_1:55073910-55073929 | None:intergenic | 55.0% | |
| TCCGTGACTTCCGCTTCTAC+GGG | + | chr1_1:55074041-55074060 | Msa0029700:CDS | 55.0% | |
| TCCCGTAGAAGCGGAAGTCA+CGG | - | chr1_1:55074045-55074064 | None:intergenic | 55.0% | |
| ATGGATTCGAAGTCGCCGCA+AGG | + | chr1_1:55074144-55074163 | Msa0029700:CDS | 55.0% | |
| TCGAAGTCGCCGCAAGGATT+CGG | + | chr1_1:55074150-55074169 | Msa0029700:CDS | 55.0% | |
| GACATGGGATCTTGGACGGG+AGG | + | chr1_1:55071968-55071987 | Msa0029700:CDS | 60.0% | |
| TGGGATCTTGGACGGGAGGT+TGG | + | chr1_1:55071972-55071991 | Msa0029700:CDS | 60.0% | |
| ! | GGTTGCTGATCAGGTTGCCG+TGG | + | chr1_1:55072478-55072497 | Msa0029700:CDS | 60.0% |
| TCGGCAGACGCTGGAAGTCA+AGG | + | chr1_1:55073043-55073062 | Msa0029700:CDS | 60.0% | |
| CGGCAGACGCTGGAAGTCAA+GGG | + | chr1_1:55073044-55073063 | Msa0029700:CDS | 60.0% | |
| CAGACGCTGGAAGTCAAGGG+AGG | + | chr1_1:55073047-55073066 | Msa0029700:CDS | 60.0% | |
| GTTGGCAGCTCAGTGTCCTC+AGG | + | chr1_1:55073163-55073182 | Msa0029700:CDS | 60.0% | |
| AGCTCAGTGTCCTCAGGTCC+CGG | + | chr1_1:55073169-55073188 | Msa0029700:CDS | 60.0% | |
| CTAGGATCCCCCCTTCCCCA+TGG | - | chr1_1:55073012-55073031 | None:intergenic | 65.0% | |
| GCTCAGTGTCCTCAGGTCCC+GGG | + | chr1_1:55073170-55073189 | Msa0029700:CDS | 65.0% | |
| CTCAGTGTCCTCAGGTCCCG+GGG | + | chr1_1:55073171-55073190 | Msa0029700:CDS | 65.0% | |
| TCAGTGTCCTCAGGTCCCGG+GGG | + | chr1_1:55073172-55073191 | Msa0029700:CDS | 65.0% | |
| TGTCCTCAGGTCCCGGGGGT+AGG | + | chr1_1:55073176-55073195 | Msa0029700:CDS | 70.0% | |
| TGTCCTACCCCCGGGACCTG+AGG | - | chr1_1:55073182-55073201 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 55070371 | 55074728 | 55070371 | ID=Msa0029700;Name=Msa0029700 |
| chr1_1 | mRNA | 55070371 | 55074728 | 55070371 | ID=Msa0029700-mRNA-1;Parent=Msa0029700;Name=Msa0029700-mRNA-1;_AED=0.07;_eAED=0.07;_QI=703|1|1|1|0.5|0.33|3|385|759 |
| chr1_1 | exon | 55070371 | 55070935 | 55070371 | ID=Msa0029700-mRNA-1:exon:16467;Parent=Msa0029700-mRNA-1 |
| chr1_1 | exon | 55071381 | 55073261 | 55071381 | ID=Msa0029700-mRNA-1:exon:16468;Parent=Msa0029700-mRNA-1 |
| chr1_1 | exon | 55073807 | 55074728 | 55073807 | ID=Msa0029700-mRNA-1:exon:16469;Parent=Msa0029700-mRNA-1 |
| chr1_1 | five_prime_UTR | 55070371 | 55070935 | 55070371 | ID=Msa0029700-mRNA-1:five_prime_utr;Parent=Msa0029700-mRNA-1 |
| chr1_1 | five_prime_UTR | 55071381 | 55071518 | 55071381 | ID=Msa0029700-mRNA-1:five_prime_utr;Parent=Msa0029700-mRNA-1 |
| chr1_1 | CDS | 55071519 | 55073261 | 55071519 | ID=Msa0029700-mRNA-1:cds;Parent=Msa0029700-mRNA-1 |
| chr1_1 | CDS | 55073807 | 55074343 | 55073807 | ID=Msa0029700-mRNA-1:cds;Parent=Msa0029700-mRNA-1 |
| chr1_1 | three_prime_UTR | 55074344 | 55074728 | 55074344 | ID=Msa0029700-mRNA-1:three_prime_utr;Parent=Msa0029700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
