AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0152190


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0152190 MtrunA17_Chr1g0161031 89.153 378 13 2 1 367 1 361 0.0 654
Msa0152190 MtrunA17_Chr6g0478581 28.074 431 184 14 1 342 1 394 1.28e-22 98.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0152190 AT3G17860.1 32.249 369 183 15 1 339 1 332 9.47e-27 109
Msa0152190 AT3G17860.2 32.628 331 171 14 39 339 11 319 3.21e-24 102
Msa0152190 AT3G17860.3 32.500 320 165 13 50 339 1 299 4.39e-24 101
Msa0152190 AT3G17860.4 32.500 320 165 13 50 339 1 299 4.39e-24 101
Msa0152190 AT1G70700.1 33.203 256 113 11 115 358 58 267 1.30e-16 79.3
Msa0152190 AT1G48500.1 28.056 360 167 12 1 339 1 289 5.84e-16 78.2
Msa0152190 AT1G48500.2 27.666 347 159 12 1 326 1 276 1.78e-12 67.4
Msa0152190 AT1G70700.3 32.589 224 95 10 115 326 58 237 1.79e-12 67.4

Find 111 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGTTAGGAGGATATATT+TGG 0.169181 1_4:+14749907 Msa0152190:three_prime_UTR
TTGAAAAGTAAACTCTTATT+AGG 0.200819 1_4:+14750004 Msa0152190:three_prime_UTR
AAGTAGCAGTGATGAGTTTA+TGG 0.220743 1_4:+14748364 Msa0152190:CDS
AATTCTTTGAGCTTTAATTT+TGG 0.245816 1_4:+14746184 Msa0152190:CDS
TCGTCTTCAGAAACTTTAAA+AGG 0.263599 1_4:-14746900 None:intergenic
CGAATGTTTCAGCAGTAAAA+TGG 0.266336 1_4:+14746838 Msa0152190:CDS
GATTTCTTGTTGAGGTTATA+TGG 0.291399 1_4:-14749439 None:intergenic
TGATATTCTAAAGATATTTC+AGG 0.304355 1_4:-14750029 None:intergenic
ATGTCTACAGGTGGACTTAT+AGG 0.310065 1_4:-14748269 None:intergenic
GAGCTAGATGCCTGAACTTC+AGG 0.316257 1_4:-14748218 None:intergenic
CCGATCGTTGGTACTGTTGC+TGG 0.321376 1_4:+14747587 Msa0152190:CDS
AGAAAGTGAATTTGCTTGAT+TGG 0.344513 1_4:-14747447 None:intergenic
CCCCACAACAAATTATTTAA+GGG 0.355484 1_4:-14749710 None:intergenic
CGTTGGTACTGTTGCTGGTT+TGG 0.366943 1_4:+14747592 Msa0152190:CDS
GAATCCAACCACTTAATATA+AGG 0.369010 1_4:-14749740 None:intergenic
TTATCTGTTTCTTCACATAC+TGG 0.372825 1_4:+14748320 Msa0152190:CDS
TCGAGCCAATGATGCTTTGC+GGG 0.375285 1_4:-14748645 None:intergenic
GCTTATCTGCAGCTTCAAAC+AGG 0.376253 1_4:+14748189 Msa0152190:CDS
GAATTTGCTTGATTGGAAAC+TGG 0.385359 1_4:-14747440 None:intergenic
TAAAGTTTCTGAAGACGATA+AGG 0.398360 1_4:+14746905 Msa0152190:CDS
GACCCTTCATTGTTAATCTC+AGG 0.410284 1_4:-14746121 None:intergenic
AAGGCTAAAATGATATCTTC+TGG 0.412380 1_4:+14746924 Msa0152190:CDS
AGAAAATAGGGATGTGGTTG+AGG 0.413306 1_4:+14749941 Msa0152190:three_prime_UTR
CAGGGCTCAACCTGAAGTTC+AGG 0.416821 1_4:+14748208 Msa0152190:CDS
CATATGTATGTTTGATACAT+AGG 0.419348 1_4:+14749678 Msa0152190:three_prime_UTR
ATGTTAGCACCTATTGAATT+CGG 0.423665 1_4:-14749478 None:intergenic
GTGGTTGCATTGACTACTTT+GGG 0.425771 1_4:-14748443 None:intergenic
GGGTCTTACCTTATATTAAG+TGG 0.426315 1_4:+14749732 Msa0152190:three_prime_UTR
GATATCTTCTGGTTTCATAC+AGG 0.429332 1_4:+14746935 Msa0152190:CDS
GCAGGCCCGCAAAGCATCAT+TGG 0.432249 1_4:+14748640 Msa0152190:CDS
TCCCTTAAATAATTTGTTGT+GGG 0.442794 1_4:+14749709 Msa0152190:three_prime_UTR
GCACAAATGCCGAATTCAAT+AGG 0.448545 1_4:+14749469 Msa0152190:CDS
GGTGGTTGCATTGACTACTT+TGG 0.451731 1_4:-14748444 None:intergenic
AAATTCACATTGTGTTGTAC+AGG 0.451805 1_4:-14747386 None:intergenic
GAGTAACTCCTTCTTATAGA+AGG 0.456364 1_4:+14749554 Msa0152190:three_prime_UTR
GGCACAAGCCATCATGTTGT+TGG 0.459085 1_4:+14748157 Msa0152190:intron
AAACTTACCTCATTGCTTGG+TGG 0.467237 1_4:+14749974 Msa0152190:three_prime_UTR
AAAAGTAGGATATCTCTGTT+AGG 0.469099 1_4:+14749894 Msa0152190:three_prime_UTR
AGGACTTGAAATACCAGAGC+AGG 0.472355 1_4:-14748297 None:intergenic
CTGCTACTTGAGCCACTCCC+TGG 0.474711 1_4:-14748350 None:intergenic
AGCAGAGACTTTGTTCAAGA+AGG 0.476877 1_4:-14746862 None:intergenic
TGTTATCCTTGGTTTGCTAC+CGG 0.482361 1_4:-14749529 None:intergenic
CCTTAAATAATTTGTTGTGG+GGG 0.484319 1_4:+14749711 Msa0152190:three_prime_UTR
TTCCCTTAAATAATTTGTTG+TGG 0.487035 1_4:+14749708 Msa0152190:three_prime_UTR
CTTACCTTATATTAAGTGGT+TGG 0.487092 1_4:+14749736 Msa0152190:three_prime_UTR
TCACATACTGGTCCACAGCC+AGG 0.488582 1_4:+14748332 Msa0152190:CDS
CTATGCTAATGCTATACTGT+TGG 0.490640 1_4:-14749774 None:intergenic
CAAGCAGATGTGGTAGGAGT+AGG 0.492652 1_4:-14748407 None:intergenic
CTTAAATAATTTGTTGTGGG+GGG 0.493779 1_4:+14749712 Msa0152190:three_prime_UTR
CTTGAGCCACTCCCTGGCTG+TGG 0.494035 1_4:-14748344 None:intergenic
GTATGTGAAGAAACAGATAA+AGG 0.494684 1_4:-14748317 None:intergenic
ATCATGTTGTTGGCTGGAAG+TGG 0.494803 1_4:+14748167 Msa0152190:CDS
ATCGAGCCAATGATGCTTTG+CGG 0.499003 1_4:-14748646 None:intergenic
GAAAATAGGGATGTGGTTGA+GGG 0.501278 1_4:+14749942 Msa0152190:three_prime_UTR
CAAGCCATCATGTTGTTGGC+TGG 0.503763 1_4:+14748161 Msa0152190:CDS
TTGAAACTTACCTCATTGCT+TGG 0.503780 1_4:+14749971 Msa0152190:three_prime_UTR
AATGCGAAGCAATCACTACT+TGG 0.504587 1_4:+14747530 Msa0152190:CDS
GAGTTACTCACTGTTATCCT+TGG 0.504866 1_4:-14749540 None:intergenic
CCCTTAAATAATTTGTTGTG+GGG 0.508409 1_4:+14749710 Msa0152190:three_prime_UTR
TGTCAGATTTAGTTACATAA+CGG 0.513985 1_4:-14749798 None:intergenic
ATTTAAAGAAAATAGGGATG+TGG 0.514631 1_4:+14749935 Msa0152190:three_prime_UTR
TAGAAGGAGACTACATAAGA+TGG 0.514753 1_4:+14749570 Msa0152190:three_prime_UTR
GCAACCACCATGGTTCCATC+AGG 0.516533 1_4:+14748458 Msa0152190:CDS
CATCCTCAGATTTCTTGTTG+AGG 0.517588 1_4:-14749447 None:intergenic
TGTAGTCTCCTTCTATAAGA+AGG 0.520559 1_4:-14749562 None:intergenic
ACTGAATGAGGTGCTGTAAC+CGG 0.521363 1_4:-14747560 None:intergenic
AACATGGTAAGTTGAGGAGC+AGG 0.523147 1_4:-14747732 None:intergenic
TCACCTGAGATTAACAATGA+AGG 0.525032 1_4:+14746118 Msa0152190:CDS
AAATTCGCATCAGGTGATGA+TGG 0.528192 1_4:+14748242 Msa0152190:CDS
GAGCAGGGTGGTATGTCTAC+AGG 0.528533 1_4:-14748281 None:intergenic
GCAGAGACTTTGTTCAAGAA+GGG 0.533315 1_4:-14746861 None:intergenic
CATTCAGTTCTTCCGATCGT+TGG 0.534965 1_4:+14747575 Msa0152190:CDS
TCTAGCTCGAAATTCGCATC+AGG 0.536374 1_4:+14748233 Msa0152190:CDS
CACAACTTTGCAAGCAGATG+TGG 0.540084 1_4:-14748417 None:intergenic
ATCACTACTTGGTGGATCAC+CGG 0.541418 1_4:+14747541 Msa0152190:CDS
CACTAGTACTGCTAATATGC+CGG 0.542872 1_4:+14749510 Msa0152190:CDS
AGTTGAGGAGCAGGTGCAGA+TGG 0.548573 1_4:-14747723 None:intergenic
GTAGACATACCACCCTGCTC+TGG 0.550254 1_4:+14748284 Msa0152190:CDS
CACAGTACCGCCATAAAACA+TGG 0.558159 1_4:-14747748 None:intergenic
AAGCAGATGTGGTAGGAGTA+GGG 0.560739 1_4:-14748406 None:intergenic
GCGAAGCAATCACTACTTGG+TGG 0.562781 1_4:+14747533 Msa0152190:CDS
TGTATGTTTGATACATAGGT+AGG 0.563499 1_4:+14749682 Msa0152190:three_prime_UTR
AATGATGCTTTGCGGGCCTG+CGG 0.566874 1_4:-14748638 None:intergenic
CACCTGAGATTAACAATGAA+GGG 0.567172 1_4:+14746119 Msa0152190:CDS
ACTGGTCCACAGCCAGGGAG+TGG 0.579269 1_4:+14748338 Msa0152190:CDS
ATTAGCAGTACTAGTGGTCG+CGG 0.581937 1_4:-14749503 None:intergenic
CACATACTGGTCCACAGCCA+GGG 0.588678 1_4:+14748333 Msa0152190:CDS
CTTATCTGCAGCTTCAAACA+GGG 0.597255 1_4:+14748190 Msa0152190:CDS
TCAAGCAAATTCACTTTCTG+CGG 0.601727 1_4:+14747451 Msa0152190:CDS
ACTTCCAGCCAACAACATGA+TGG 0.615633 1_4:-14748165 None:intergenic
CGGCATATTAGCAGTACTAG+TGG 0.617445 1_4:-14749509 None:intergenic
ATACATATGAATCTCAGCAT+AGG 0.627487 1_4:-14749664 None:intergenic
AGTAGGATATCTCTGTTAGG+AGG 0.627796 1_4:+14749897 Msa0152190:three_prime_UTR
TAGAACTCTTTCAAACACGA+TGG 0.630111 1_4:+14747329 Msa0152190:intron
TCTTTCAAACACGATGGACA+AGG 0.634289 1_4:+14747335 Msa0152190:CDS
GGACTTGAAATACCAGAGCA+GGG 0.635730 1_4:-14748296 None:intergenic
CCAGCAACAGTACCAACGAT+CGG 0.636094 1_4:-14747587 None:intergenic
CCATAAAACATGGTAAGTTG+AGG 0.638856 1_4:-14747738 None:intergenic
ATGGCTGCTAAAACATCTAG+AGG 0.639805 1_4:+14748383 Msa0152190:CDS
ACGATCGGAAGAACTGAATG+AGG 0.643920 1_4:-14747572 None:intergenic
CAGGGTGGTATGTCTACAGG+TGG 0.644694 1_4:-14748278 None:intergenic
TTGCTGGTTTGGTTGAACCA+TGG 0.654058 1_4:+14747603 Msa0152190:CDS
TAACCTCAACAAGAAATCTG+AGG 0.657118 1_4:+14749444 Msa0152190:CDS
ACTAAAACCACCAAGCAATG+AGG 0.661025 1_4:-14749981 None:intergenic
TTACATACCTGATGGAACCA+TGG 0.681302 1_4:-14748465 None:intergenic
AATATGCCGGTAGCAAACCA+AGG 0.684244 1_4:+14749523 Msa0152190:CDS
AGTAGTCAATGCAACCACCA+TGG 0.687562 1_4:+14748448 Msa0152190:CDS
TTCAAACACGATGGACAAGG+TGG 0.707235 1_4:+14747338 Msa0152190:CDS
ACTTTGCAAGCAGATGTGGT+AGG 0.708662 1_4:-14748413 None:intergenic
CTTGAAATACCAGAGCAGGG+TGG 0.775660 1_4:-14748293 None:intergenic
CATACCTGATGGAACCATGG+TGG 0.816498 1_4:-14748462 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTTTATTTAAAGAAAATA+GGG + chr1_4:14749929-14749948 Msa0152190:three_prime_UTR 10.0%
!!! TTCTTTGCTTTTTTTTTTTT+TGG + chr1_4:14746161-14746180 Msa0152190:CDS 15.0%
!! ATACTTATATAGATGTAAAA+AGG + chr1_4:14746348-14746367 Msa0152190:intron 15.0%
!!! TTAATTATACAAGTCTTTTT+AGG + chr1_4:14747151-14747170 Msa0152190:intron 15.0%
!!! ATTCATATGAAATTGATTTT+CGG + chr1_4:14747179-14747198 Msa0152190:intron 15.0%
!!! CCTATATTTATTATAACTTT+TGG - chr1_4:14748542-14748561 None:intergenic 15.0%
!! CCAAAAGTTATAATAAATAT+AGG + chr1_4:14748539-14748558 Msa0152190:intron 15.0%
!! AATTATAAGATGTATATTCA+TGG + chr1_4:14749229-14749248 Msa0152190:intron 15.0%
!!! TGTATAAAATTATTTTGGAA+GGG - chr1_4:14749341-14749360 None:intergenic 15.0%
!!! ATGTATAAAATTATTTTGGA+AGG - chr1_4:14749342-14749361 None:intergenic 15.0%
!!! CTAGATGTATAAAATTATTT+TGG - chr1_4:14749346-14749365 None:intergenic 15.0%
!! TATATATATATATCTGATCT+TGG - chr1_4:14749854-14749873 None:intergenic 15.0%
!!! TATTTAGTTTTTACAAAAGT+AGG + chr1_4:14749880-14749899 Msa0152190:three_prime_UTR 15.0%
!!! GGATTTTATTTAAAGAAAAT+AGG + chr1_4:14749928-14749947 Msa0152190:three_prime_UTR 15.0%
!!! AATTCTTTGAGCTTTAATTT+TGG + chr1_4:14746184-14746203 Msa0152190:CDS 20.0%
!! TGCACCAAATTAATTATTAA+AGG + chr1_4:14746431-14746450 Msa0152190:intron 20.0%
!! GCACCAAATTAATTATTAAA+GGG + chr1_4:14746432-14746451 Msa0152190:intron 20.0%
!! ACACCCTTTAATAATTAATT+TGG - chr1_4:14746438-14746457 None:intergenic 20.0%
!! AATGTTAATAATTAGTTGTC+AGG - chr1_4:14746709-14746728 None:intergenic 20.0%
!! TGTTAAAAAATTGTGAAGTT+AGG + chr1_4:14746992-14747011 Msa0152190:intron 20.0%
!! TAAAACAAATTCACATTTAG+AGG + chr1_4:14747062-14747081 Msa0152190:intron 20.0%
!! AAAACAAATTCACATTTAGA+GGG + chr1_4:14747063-14747082 Msa0152190:intron 20.0%
!! AAACATCCTAAAATTATGTT+CGG - chr1_4:14747207-14747226 None:intergenic 20.0%
!!! AAGTTACAAGATGATTTTTT+AGG - chr1_4:14747487-14747506 None:intergenic 20.0%
!!! AAAAATCATCTTGTAACTTT+TGG + chr1_4:14747488-14747507 Msa0152190:CDS 20.0%
!! CCTAAAAAATCTTTATAAGT+GGG + chr1_4:14748847-14748866 Msa0152190:intron 20.0%
!! TGAAAAAGTCTTTATAAAGT+GGG + chr1_4:14749155-14749174 Msa0152190:intron 20.0%
!!! ATACATCTTATAATTTGTGT+TGG - chr1_4:14749224-14749243 None:intergenic 20.0%
!!! GTATAAAATTATTTTGGAAG+GGG - chr1_4:14749340-14749359 None:intergenic 20.0%
!!! CAATATTTTAAGTTACATGT+TGG - chr1_4:14749608-14749627 None:intergenic 20.0%
!! TTGAAAAGTAAACTCTTATT+AGG + chr1_4:14750004-14750023 Msa0152190:three_prime_UTR 20.0%
!!! TGATATTCTAAAGATATTTC+AGG - chr1_4:14750032-14750051 None:intergenic 20.0%
!!! TTTGAGCTTTAATTTTGGTA+TGG + chr1_4:14746189-14746208 Msa0152190:intron 25.0%
!!! TTTAATTTTGGTATGGTTTG+TGG + chr1_4:14746196-14746215 Msa0152190:intron 25.0%
!!! TGATTTTTCTGAAGTTGTTT+TGG + chr1_4:14746262-14746281 Msa0152190:intron 25.0%
!! AATTATTAAAGGGTGTAGTA+TGG + chr1_4:14746442-14746461 Msa0152190:intron 25.0%
!!! TAAATTTGGTTTTAATCCTC+CGG + chr1_4:14746467-14746486 Msa0152190:intron 25.0%
! TTATGTTAATGATTCCTTTG+TGG + chr1_4:14746799-14746818 Msa0152190:intron 25.0%
! AAAAACAGAAATTGAGAGAA+AGG - chr1_4:14746972-14746991 None:intergenic 25.0%
! TAAATGGTAAGAACAAACAA+TGG - chr1_4:14747311-14747330 None:intergenic 25.0%
! AAATCAATCCAAGTAGAATA+GGG - chr1_4:14747827-14747846 None:intergenic 25.0%
! TAAATCAATCCAAGTAGAAT+AGG - chr1_4:14747828-14747847 None:intergenic 25.0%
! TTGTCATAAACTAACTCATT+AGG + chr1_4:14747949-14747968 Msa0152190:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+AGG + chr1_4:14748041-14748060 Msa0152190:intron 25.0%
! GTATGATTTCCTTTATACTT+GGG - chr1_4:14748067-14748086 None:intergenic 25.0%
! TGTATGATTTCCTTTATACT+TGG - chr1_4:14748068-14748087 None:intergenic 25.0%
!!! AAAGATGATAACTTGTTGTA+TGG - chr1_4:14748737-14748756 None:intergenic 25.0%
! GCCTAAAAAATCTTTATAAG+TGG + chr1_4:14748846-14748865 Msa0152190:intron 25.0%
!!! CCCACTTATAAAGATTTTTT+AGG - chr1_4:14748850-14748869 None:intergenic 25.0%
! CTGAAAAAGTCTTTATAAAG+TGG + chr1_4:14749154-14749173 Msa0152190:intron 25.0%
!!! CATCATACCAATTATTTTAG+AGG - chr1_4:14749290-14749309 None:intergenic 25.0%
! AAATAATTGGTATGATGTGT+TGG + chr1_4:14749293-14749312 Msa0152190:intron 25.0%
! CATATGTATGTTTGATACAT+AGG + chr1_4:14749678-14749697 Msa0152190:three_prime_UTR 25.0%
!!! TTCCCTTAAATAATTTGTTG+TGG + chr1_4:14749708-14749727 Msa0152190:three_prime_UTR 25.0%
!!! TCCCTTAAATAATTTGTTGT+GGG + chr1_4:14749709-14749728 Msa0152190:three_prime_UTR 25.0%
! TGTCAGATTTAGTTACATAA+CGG - chr1_4:14749801-14749820 None:intergenic 25.0%
! ATTTAAAGAAAATAGGGATG+TGG + chr1_4:14749935-14749954 Msa0152190:three_prime_UTR 25.0%
AATGAAGGGTCAAAAAATTC+AGG + chr1_4:14746133-14746152 Msa0152190:CDS 30.0%
ATATAAGTATCTGTGTTGTG+AGG - chr1_4:14746338-14746357 None:intergenic 30.0%
TATTACTACACCCTTCAATA+TGG - chr1_4:14746410-14746429 None:intergenic 30.0%
GGTGTAGTATGGTTTAAATT+TGG + chr1_4:14746453-14746472 Msa0152190:intron 30.0%
! TTTTAATCCTCCGGTTTATA+AGG + chr1_4:14746476-14746495 Msa0152190:intron 30.0%
ATTAAGAACTTGAGTTCGTT+GGG + chr1_4:14746597-14746616 Msa0152190:intron 30.0%
TCGTCTTCAGAAACTTTAAA+AGG - chr1_4:14746903-14746922 None:intergenic 30.0%
! TAAAGTTTCTGAAGACGATA+AGG + chr1_4:14746905-14746924 Msa0152190:CDS 30.0%
AAGGCTAAAATGATATCTTC+TGG + chr1_4:14746924-14746943 Msa0152190:CDS 30.0%
!! GTGTTTGAAAGAGTTCTAAA+TGG - chr1_4:14747327-14747346 None:intergenic 30.0%
AAATTCACATTGTGTTGTAC+AGG - chr1_4:14747389-14747408 None:intergenic 30.0%
! AGAAAGTGAATTTGCTTGAT+TGG - chr1_4:14747450-14747469 None:intergenic 30.0%
!!! ACAAGATGATTTTTTAGGAG+CGG - chr1_4:14747482-14747501 None:intergenic 30.0%
! ACTTTTGGTCAGAATATGAA+CGG + chr1_4:14747503-14747522 Msa0152190:CDS 30.0%
GCATTGAACTAAAATTACCA+TGG - chr1_4:14747623-14747642 None:intergenic 30.0%
ATATATTCCCCTATTCTACT+TGG + chr1_4:14747816-14747835 Msa0152190:intron 30.0%
AATCAATCCAAGTAGAATAG+GGG - chr1_4:14747826-14747845 None:intergenic 30.0%
AATAACCTGAAAACAGCTTA+TGG - chr1_4:14747931-14747950 None:intergenic 30.0%
!! TTTTGACTGAAGTTAAGCAT+AGG + chr1_4:14748116-14748135 Msa0152190:intron 30.0%
AGGTTTGATCAATTGTATTC+AGG + chr1_4:14748136-14748155 Msa0152190:intron 30.0%
GTATGTGAAGAAACAGATAA+AGG - chr1_4:14748320-14748339 None:intergenic 30.0%
! TTATCTGTTTCTTCACATAC+TGG + chr1_4:14748320-14748339 Msa0152190:CDS 30.0%
TTATACTGTTACATACCTGA+TGG - chr1_4:14748476-14748495 None:intergenic 30.0%
GAATAACTCCATACTACAAA+AGG - chr1_4:14748571-14748590 None:intergenic 30.0%
GAAAGGTTAGATCTAATACA+CGG + chr1_4:14748686-14748705 Msa0152190:intron 30.0%
AAAGGTTAGATCTAATACAC+GGG + chr1_4:14748687-14748706 Msa0152190:intron 30.0%
!! GATAACTTGTTGTATGGAAA+AGG - chr1_4:14748731-14748750 None:intergenic 30.0%
GACCATCTTATAATTTGAAG+TGG - chr1_4:14748918-14748937 None:intergenic 30.0%
! ACCTATAGAGACTTTTGAAT+GGG - chr1_4:14748947-14748966 None:intergenic 30.0%
ATTCAAAAGTCTCTATAGGT+GGG + chr1_4:14748947-14748966 Msa0152190:intron 30.0%
GGTCAACACAAATTATAAGA+TGG + chr1_4:14749013-14749032 Msa0152190:intron 30.0%
GTCTATATGACATCTGATTT+GGG - chr1_4:14749135-14749154 None:intergenic 30.0%
AGTCTATATGACATCTGATT+TGG - chr1_4:14749136-14749155 None:intergenic 30.0%
!! TCGTTTGCCTCTAAAATAAT+TGG + chr1_4:14749280-14749299 Msa0152190:intron 30.0%
! TTATGTGTTTCTGTCAATAC+AGG + chr1_4:14749401-14749420 Msa0152190:intron 30.0%
! TATGTGTTTCTGTCAATACA+GGG + chr1_4:14749402-14749421 Msa0152190:intron 30.0%
GATTTCTTGTTGAGGTTATA+TGG - chr1_4:14749442-14749461 None:intergenic 30.0%
ATGTTAGCACCTATTGAATT+CGG - chr1_4:14749481-14749500 None:intergenic 30.0%
ATACATATGAATCTCAGCAT+AGG - chr1_4:14749667-14749686 None:intergenic 30.0%
TGTATGTTTGATACATAGGT+AGG + chr1_4:14749682-14749701 Msa0152190:three_prime_UTR 30.0%
CCCCACAACAAATTATTTAA+GGG - chr1_4:14749713-14749732 None:intergenic 30.0%
!! CCCTTAAATAATTTGTTGTG+GGG + chr1_4:14749710-14749729 Msa0152190:three_prime_UTR 30.0%
!! CCTTAAATAATTTGTTGTGG+GGG + chr1_4:14749711-14749730 Msa0152190:three_prime_UTR 30.0%
!! CTTAAATAATTTGTTGTGGG+GGG + chr1_4:14749712-14749731 Msa0152190:three_prime_UTR 30.0%
CTTACCTTATATTAAGTGGT+TGG + chr1_4:14749736-14749755 Msa0152190:three_prime_UTR 30.0%
GAATCCAACCACTTAATATA+AGG - chr1_4:14749743-14749762 None:intergenic 30.0%
AAAAGTAGGATATCTCTGTT+AGG + chr1_4:14749894-14749913 Msa0152190:three_prime_UTR 30.0%
TCACCTGAGATTAACAATGA+AGG + chr1_4:14746118-14746137 Msa0152190:CDS 35.0%
CACCTGAGATTAACAATGAA+GGG + chr1_4:14746119-14746138 Msa0152190:CDS 35.0%
TGTTTCCTTGTCCATATTGA+AGG + chr1_4:14746396-14746415 Msa0152190:intron 35.0%
GTTTCCTTGTCCATATTGAA+GGG + chr1_4:14746397-14746416 Msa0152190:intron 35.0%
GACCAAACTGTAATTTACCA+GGG - chr1_4:14746509-14746528 None:intergenic 35.0%
CTGGTAAATTACAGTTTGGT+CGG + chr1_4:14746508-14746527 Msa0152190:intron 35.0%
TAAATTACAGTTTGGTCGGA+AGG + chr1_4:14746512-14746531 Msa0152190:intron 35.0%
TTTGGTCGGAAGGTAAATAA+AGG + chr1_4:14746522-14746541 Msa0152190:intron 35.0%
CTCAAGTTCTTAATGAGCTT+CGG - chr1_4:14746591-14746610 None:intergenic 35.0%
CATTAAGAACTTGAGTTCGT+TGG + chr1_4:14746596-14746615 Msa0152190:intron 35.0%
TTAAGAACTTGAGTTCGTTG+GGG + chr1_4:14746598-14746617 Msa0152190:intron 35.0%
CGAATGTTTCAGCAGTAAAA+TGG + chr1_4:14746838-14746857 Msa0152190:CDS 35.0%
!! GATATCTTCTGGTTTCATAC+AGG + chr1_4:14746935-14746954 Msa0152190:CDS 35.0%
AGGACAACATTCAGTTAATC+AGG + chr1_4:14747012-14747031 Msa0152190:intron 35.0%
! TTTTCAGTGCAATCTGCTTA+CGG + chr1_4:14747122-14747141 Msa0152190:intron 35.0%
! TCGGATCCGAACATAATTTT+AGG + chr1_4:14747198-14747217 Msa0152190:intron 35.0%
AACAAACAATGGAAGGAAGT+GGG - chr1_4:14747300-14747319 None:intergenic 35.0%
TGGTAAGAACAAACAATGGA+AGG - chr1_4:14747307-14747326 None:intergenic 35.0%
TAGAACTCTTTCAAACACGA+TGG + chr1_4:14747329-14747348 Msa0152190:intron 35.0%
! GAATTTGCTTGATTGGAAAC+TGG - chr1_4:14747443-14747462 None:intergenic 35.0%
TCAAGCAAATTCACTTTCTG+CGG + chr1_4:14747451-14747470 Msa0152190:CDS 35.0%
CAATGCTTGAGATGTTTCTT+AGG + chr1_4:14747637-14747656 Msa0152190:intron 35.0%
! GAGATGTTTCTTAGGAGTTT+TGG + chr1_4:14747645-14747664 Msa0152190:intron 35.0%
CCATAAAACATGGTAAGTTG+AGG - chr1_4:14747741-14747760 None:intergenic 35.0%
! CCTCAACTTACCATGTTTTA+TGG + chr1_4:14747738-14747757 Msa0152190:CDS 35.0%
! CAACTTACCATGTTTTATGG+CGG + chr1_4:14747741-14747760 Msa0152190:CDS 35.0%
TGAGAGAAAAATACCTTCTC+AGG - chr1_4:14747795-14747814 None:intergenic 35.0%
AGTGCTTATGATAGTAGACA+AGG - chr1_4:14747856-14747875 None:intergenic 35.0%
! AATGAGAGTATGAGACTGTT+TGG + chr1_4:14747876-14747895 Msa0152190:intron 35.0%
AAGTAGCAGTGATGAGTTTA+TGG + chr1_4:14748364-14748383 Msa0152190:CDS 35.0%
CTAGTTCAACCTTACAAAAC+CGG - chr1_4:14748894-14748913 None:intergenic 35.0%
GGCCACTTCAAATTATAAGA+TGG + chr1_4:14748913-14748932 Msa0152190:intron 35.0%
! CACCTATAGAGACTTTTGAA+TGG - chr1_4:14748948-14748967 None:intergenic 35.0%
CATTCAAAAGTCTCTATAGG+TGG + chr1_4:14748946-14748965 Msa0152190:intron 35.0%
AGTGCCTATCCAAAATTTGT+TGG + chr1_4:14749044-14749063 Msa0152190:intron 35.0%
! GTGCCTATCCAAAATTTGTT+GGG + chr1_4:14749045-14749064 Msa0152190:intron 35.0%
CTAGAGTGTGATCCAATAAA+GGG - chr1_4:14749074-14749093 None:intergenic 35.0%
! TCTAGAGTGTGATCCAATAA+AGG - chr1_4:14749075-14749094 None:intergenic 35.0%
AATTGGTATGATGTGTTGGA+AGG + chr1_4:14749297-14749316 Msa0152190:intron 35.0%
TAACCTCAACAAGAAATCTG+AGG + chr1_4:14749444-14749463 Msa0152190:CDS 35.0%
GAGTAACTCCTTCTTATAGA+AGG + chr1_4:14749554-14749573 Msa0152190:three_prime_UTR 35.0%
TGTAGTCTCCTTCTATAAGA+AGG - chr1_4:14749565-14749584 None:intergenic 35.0%
TAGAAGGAGACTACATAAGA+TGG + chr1_4:14749570-14749589 Msa0152190:three_prime_UTR 35.0%
!! CTCAGCATAGGTTTTAATCA+TGG - chr1_4:14749655-14749674 None:intergenic 35.0%
CCCCCACAACAAATTATTTA+AGG - chr1_4:14749714-14749733 None:intergenic 35.0%
GGGTCTTACCTTATATTAAG+TGG + chr1_4:14749732-14749751 Msa0152190:three_prime_UTR 35.0%
CTATGCTAATGCTATACTGT+TGG - chr1_4:14749777-14749796 None:intergenic 35.0%
CTCTGTTAGGAGGATATATT+TGG + chr1_4:14749907-14749926 Msa0152190:three_prime_UTR 35.0%
TTGAAACTTACCTCATTGCT+TGG + chr1_4:14749971-14749990 Msa0152190:three_prime_UTR 35.0%
GACCCTTCATTGTTAATCTC+AGG - chr1_4:14746124-14746143 None:intergenic 40.0%
TACACCCTTCAATATGGACA+AGG - chr1_4:14746404-14746423 None:intergenic 40.0%
ATCCTCCGGTTTATAAGGAA+AGG + chr1_4:14746481-14746500 Msa0152190:intron 40.0%
AGCCCTGGTAAATTACAGTT+TGG + chr1_4:14746504-14746523 Msa0152190:intron 40.0%
CGACCAAACTGTAATTTACC+AGG - chr1_4:14746510-14746529 None:intergenic 40.0%
CGGAAGGTAAATAAAGGACT+CGG + chr1_4:14746528-14746547 Msa0152190:intron 40.0%
GGAAGGTAAATAAAGGACTC+GGG + chr1_4:14746529-14746548 Msa0152190:intron 40.0%
TAAGAACTTGAGTTCGTTGG+GGG + chr1_4:14746599-14746618 Msa0152190:intron 40.0%
GTTGAGTAGCTCAATTGGTT+TGG + chr1_4:14746622-14746641 Msa0152190:intron 40.0%
!! AGCTCAATTGGTTTGGCTAA+AGG + chr1_4:14746629-14746648 Msa0152190:intron 40.0%
!! GCTCAATTGGTTTGGCTAAA+GGG + chr1_4:14746630-14746649 Msa0152190:intron 40.0%
!! TTGGTTTGGCTAAAGGGTTA+AGG + chr1_4:14746636-14746655 Msa0152190:intron 40.0%
CTAAAGGGTTAAGGAGTAAG+AGG + chr1_4:14746645-14746664 Msa0152190:intron 40.0%
GTTAAGGAGTAAGAGGACTT+GGG + chr1_4:14746652-14746671 Msa0152190:intron 40.0%
ATTCCTTTGTGGCTATGTGT+AGG + chr1_4:14746810-14746829 Msa0152190:intron 40.0%
AAACCTACACATAGCCACAA+AGG - chr1_4:14746816-14746835 None:intergenic 40.0%
GCAGAGACTTTGTTCAAGAA+GGG - chr1_4:14746864-14746883 None:intergenic 40.0%
AGCAGAGACTTTGTTCAAGA+AGG - chr1_4:14746865-14746884 None:intergenic 40.0%
ATTCACATTTAGAGGGTCGT+TGG + chr1_4:14747070-14747089 Msa0152190:intron 40.0%
GAACAAACAATGGAAGGAAG+TGG - chr1_4:14747301-14747320 None:intergenic 40.0%
TCTTTCAAACACGATGGACA+AGG + chr1_4:14747335-14747354 Msa0152190:CDS 40.0%
AATGCGAAGCAATCACTACT+TGG + chr1_4:14747530-14747549 Msa0152190:CDS 40.0%
CAATGATATCACTCCTGAGA+AGG + chr1_4:14747779-14747798 Msa0152190:intron 40.0%
TTTGGAGAGCTTATCGAATC+AGG + chr1_4:14747894-14747913 Msa0152190:intron 40.0%
!! CTTTATACTTGGGCCTTGTT+TGG - chr1_4:14748057-14748076 None:intergenic 40.0%
CAAACAAGGCCCAAGTATAA+AGG + chr1_4:14748055-14748074 Msa0152190:intron 40.0%
CTTATCTGCAGCTTCAAACA+GGG + chr1_4:14748190-14748209 Msa0152190:CDS 40.0%
AAATTCGCATCAGGTGATGA+TGG + chr1_4:14748242-14748261 Msa0152190:CDS 40.0%
! ATGTCTACAGGTGGACTTAT+AGG - chr1_4:14748272-14748291 None:intergenic 40.0%
ATGGCTGCTAAAACATCTAG+AGG + chr1_4:14748383-14748402 Msa0152190:CDS 40.0%
!! GTGGTTGCATTGACTACTTT+GGG - chr1_4:14748446-14748465 None:intergenic 40.0%
TTACATACCTGATGGAACCA+TGG - chr1_4:14748468-14748487 None:intergenic 40.0%
! GGATGCATCCTTTTGTAGTA+TGG + chr1_4:14748560-14748579 Msa0152190:intron 40.0%
! ATTTTATGCAGCTATACCGC+AGG + chr1_4:14748622-14748641 Msa0152190:intron 40.0%
!!! AGCATCATTGGCTCGATTTT+TGG + chr1_4:14748652-14748671 Msa0152190:CDS 40.0%
ATATCACTCACCTTACAAGC+CGG + chr1_4:14748872-14748891 Msa0152190:intron 40.0%
!! CGGTTTTGTAAGGTTGAACT+AGG + chr1_4:14748892-14748911 Msa0152190:intron 40.0%
GCCCATTCAAAAGTCTCTAT+AGG + chr1_4:14748943-14748962 Msa0152190:intron 40.0%
GCATACATCACCTTACAAGT+CGG + chr1_4:14748972-14748991 Msa0152190:intron 40.0%
! TCGCCCAACAAATTTTGGAT+AGG - chr1_4:14749051-14749070 None:intergenic 40.0%
CACTCTAGATGTCAAGTTCA+TGG + chr1_4:14749086-14749105 Msa0152190:intron 40.0%
!! ACCTAACAAGCCAGTTTTGT+GGG + chr1_4:14749186-14749205 Msa0152190:intron 40.0%
!! AGTTTTGTGGGGTTGAGTTT+GGG + chr1_4:14749198-14749217 Msa0152190:intron 40.0%
TATGATGTGTTGGAAGGAAG+AGG + chr1_4:14749303-14749322 Msa0152190:intron 40.0%
CATCCTCAGATTTCTTGTTG+AGG - chr1_4:14749450-14749469 None:intergenic 40.0%
GCACAAATGCCGAATTCAAT+AGG + chr1_4:14749469-14749488 Msa0152190:CDS 40.0%
CACTAGTACTGCTAATATGC+CGG + chr1_4:14749510-14749529 Msa0152190:CDS 40.0%
!! TGTTATCCTTGGTTTGCTAC+CGG - chr1_4:14749532-14749551 None:intergenic 40.0%
GAGTTACTCACTGTTATCCT+TGG - chr1_4:14749543-14749562 None:intergenic 40.0%
AGTAGGATATCTCTGTTAGG+AGG + chr1_4:14749897-14749916 Msa0152190:three_prime_UTR 40.0%
AGAAAATAGGGATGTGGTTG+AGG + chr1_4:14749941-14749960 Msa0152190:three_prime_UTR 40.0%
GAAAATAGGGATGTGGTTGA+GGG + chr1_4:14749942-14749961 Msa0152190:three_prime_UTR 40.0%
AAACTTACCTCATTGCTTGG+TGG + chr1_4:14749974-14749993 Msa0152190:three_prime_UTR 40.0%
ACTAAAACCACCAAGCAATG+AGG - chr1_4:14749984-14750003 None:intergenic 40.0%
CTCCTTTCCTTATAAACCGG+AGG - chr1_4:14746486-14746505 None:intergenic 45.0%
GGGCTCCTTTCCTTATAAAC+CGG - chr1_4:14746489-14746508 None:intergenic 45.0%
GTTTATAAGGAAAGGAGCCC+TGG + chr1_4:14746489-14746508 Msa0152190:intron 45.0%
AAGGACTCGGGTTCGAAATT+AGG + chr1_4:14746541-14746560 Msa0152190:intron 45.0%
CGGTTAAGCTCGAATTGATC+AGG - chr1_4:14746571-14746590 None:intergenic 45.0%
AAGAACTTGAGTTCGTTGGG+GGG + chr1_4:14746600-14746619 Msa0152190:intron 45.0%
GGTTAAGGAGTAAGAGGACT+TGG + chr1_4:14746651-14746670 Msa0152190:intron 45.0%
! AGCATTTTTCTCGTTCACCG+TGG - chr1_4:14746684-14746703 None:intergenic 45.0%
TTCAAACACGATGGACAAGG+TGG + chr1_4:14747338-14747357 Msa0152190:CDS 45.0%
! ATCACTACTTGGTGGATCAC+CGG + chr1_4:14747541-14747560 Msa0152190:CDS 45.0%
!! ACTGAATGAGGTGCTGTAAC+CGG - chr1_4:14747563-14747582 None:intergenic 45.0%
ACGATCGGAAGAACTGAATG+AGG - chr1_4:14747575-14747594 None:intergenic 45.0%
CATTCAGTTCTTCCGATCGT+TGG + chr1_4:14747575-14747594 Msa0152190:CDS 45.0%
!! TTGCTGGTTTGGTTGAACCA+TGG + chr1_4:14747603-14747622 Msa0152190:CDS 45.0%
! AACATGGTAAGTTGAGGAGC+AGG - chr1_4:14747735-14747754 None:intergenic 45.0%
CACAGTACCGCCATAAAACA+TGG - chr1_4:14747751-14747770 None:intergenic 45.0%
!! CACGTCCATAAGCTGTTTTC+AGG + chr1_4:14747923-14747942 Msa0152190:intron 45.0%
ACTTCCAGCCAACAACATGA+TGG - chr1_4:14748168-14748187 None:intergenic 45.0%
! ATCATGTTGTTGGCTGGAAG+TGG + chr1_4:14748167-14748186 Msa0152190:CDS 45.0%
GCTTATCTGCAGCTTCAAAC+AGG + chr1_4:14748189-14748208 Msa0152190:CDS 45.0%
! TCTAGCTCGAAATTCGCATC+AGG + chr1_4:14748233-14748252 Msa0152190:CDS 45.0%
GGACTTGAAATACCAGAGCA+GGG - chr1_4:14748299-14748318 None:intergenic 45.0%
AGGACTTGAAATACCAGAGC+AGG - chr1_4:14748300-14748319 None:intergenic 45.0%
AAGCAGATGTGGTAGGAGTA+GGG - chr1_4:14748409-14748428 None:intergenic 45.0%
ACTTTGCAAGCAGATGTGGT+AGG - chr1_4:14748416-14748435 None:intergenic 45.0%
CACAACTTTGCAAGCAGATG+TGG - chr1_4:14748420-14748439 None:intergenic 45.0%
!! GGTGGTTGCATTGACTACTT+TGG - chr1_4:14748447-14748466 None:intergenic 45.0%
AGTAGTCAATGCAACCACCA+TGG + chr1_4:14748448-14748467 Msa0152190:CDS 45.0%
ATCGAGCCAATGATGCTTTG+CGG - chr1_4:14748649-14748668 None:intergenic 45.0%
!! TCGATTTTTGGAGAAGCGCA+AGG + chr1_4:14748664-14748683 Msa0152190:CDS 45.0%
!! TTTTGGAGAAGCGCAAGGAA+AGG + chr1_4:14748669-14748688 Msa0152190:CDS 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG - chr1_4:14748885-14748904 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG + chr1_4:14748882-14748901 Msa0152190:intron 45.0%
CAAAAGTCTCTATAGGTGGG+AGG + chr1_4:14748950-14748969 Msa0152190:intron 45.0%
! ACCTTACAAGTCGGCTTTGT+AGG + chr1_4:14748981-14749000 Msa0152190:intron 45.0%
! CCTTACAAGTCGGCTTTGTA+GGG + chr1_4:14748982-14749001 Msa0152190:intron 45.0%
! AAGGGTCGCCCAACAAATTT+TGG - chr1_4:14749056-14749075 None:intergenic 45.0%
TTTGTTGGGCGACCCTTTAT+TGG + chr1_4:14749059-14749078 Msa0152190:intron 45.0%
TCAAGTTCATGGTGTGACGA+GGG + chr1_4:14749097-14749116 Msa0152190:intron 45.0%
! CACCTAACAAGCCAGTTTTG+TGG + chr1_4:14749185-14749204 Msa0152190:intron 45.0%
!! CCTAACAAGCCAGTTTTGTG+GGG + chr1_4:14749187-14749206 Msa0152190:intron 45.0%
CAAACTCAACCCCACAAAAC+TGG - chr1_4:14749199-14749218 None:intergenic 45.0%
!! CAGTTTTGTGGGGTTGAGTT+TGG + chr1_4:14749197-14749216 Msa0152190:intron 45.0%
ATTAGCAGTACTAGTGGTCG+CGG - chr1_4:14749506-14749525 None:intergenic 45.0%
CGGCATATTAGCAGTACTAG+TGG - chr1_4:14749512-14749531 None:intergenic 45.0%
AATATGCCGGTAGCAAACCA+AGG + chr1_4:14749523-14749542 Msa0152190:CDS 45.0%
GCGAAGCAATCACTACTTGG+TGG + chr1_4:14747533-14747552 Msa0152190:CDS 50.0%
CCAGCAACAGTACCAACGAT+CGG - chr1_4:14747590-14747609 None:intergenic 50.0%
! CGTTGGTACTGTTGCTGGTT+TGG + chr1_4:14747592-14747611 Msa0152190:CDS 50.0%
GGCACAAGCCATCATGTTGT+TGG + chr1_4:14748157-14748176 Msa0152190:intron 50.0%
CAAGCCATCATGTTGTTGGC+TGG + chr1_4:14748161-14748180 Msa0152190:CDS 50.0%
GAGCTAGATGCCTGAACTTC+AGG - chr1_4:14748221-14748240 None:intergenic 50.0%
CTTGAAATACCAGAGCAGGG+TGG - chr1_4:14748296-14748315 None:intergenic 50.0%
CAAGCAGATGTGGTAGGAGT+AGG - chr1_4:14748410-14748429 None:intergenic 50.0%
CATACCTGATGGAACCATGG+TGG - chr1_4:14748465-14748484 None:intergenic 50.0%
TCGAGCCAATGATGCTTTGC+GGG - chr1_4:14748648-14748667 None:intergenic 50.0%
!! CCCTACAAAGCCGACTTGTA+AGG - chr1_4:14748985-14749004 None:intergenic 50.0%
! CGGCTTTGTAGGGTTGAGTT+AGG + chr1_4:14748992-14749011 Msa0152190:intron 50.0%
GTCAAGTTCATGGTGTGACG+AGG + chr1_4:14749096-14749115 Msa0152190:intron 50.0%
!! CCCCACAAAACTGGCTTGTT+AGG - chr1_4:14749190-14749209 None:intergenic 50.0%
GGGGGGTTGAGTAGCTCAAT+TGG + chr1_4:14746617-14746636 Msa0152190:intron 55.0%
GAGGACTTGGGCTCAAACCA+CGG + chr1_4:14746664-14746683 Msa0152190:intron 55.0%
CCGATCGTTGGTACTGTTGC+TGG + chr1_4:14747587-14747606 Msa0152190:CDS 55.0%
AGTTGAGGAGCAGGTGCAGA+TGG - chr1_4:14747726-14747745 None:intergenic 55.0%
CAGGGCTCAACCTGAAGTTC+AGG + chr1_4:14748208-14748227 Msa0152190:CDS 55.0%
CAGGGTGGTATGTCTACAGG+TGG - chr1_4:14748281-14748300 None:intergenic 55.0%
GAGCAGGGTGGTATGTCTAC+AGG - chr1_4:14748284-14748303 None:intergenic 55.0%
GTAGACATACCACCCTGCTC+TGG + chr1_4:14748284-14748303 Msa0152190:CDS 55.0%
TCACATACTGGTCCACAGCC+AGG + chr1_4:14748332-14748351 Msa0152190:CDS 55.0%
CACATACTGGTCCACAGCCA+GGG + chr1_4:14748333-14748352 Msa0152190:CDS 55.0%
GCAACCACCATGGTTCCATC+AGG + chr1_4:14748458-14748477 Msa0152190:CDS 55.0%
AATGATGCTTTGCGGGCCTG+CGG - chr1_4:14748641-14748660 None:intergenic 55.0%
GGACTCGAGCGTGAGCAGAT+AGG + chr1_4:14747091-14747110 Msa0152190:intron 60.0%
! CTGCTACTTGAGCCACTCCC+TGG - chr1_4:14748353-14748372 None:intergenic 60.0%
! GCAGGCCCGCAAAGCATCAT+TGG + chr1_4:14748640-14748659 Msa0152190:CDS 60.0%
ACTGGTCCACAGCCAGGGAG+TGG + chr1_4:14748338-14748357 Msa0152190:CDS 65.0%
CTTGAGCCACTCCCTGGCTG+TGG - chr1_4:14748347-14748366 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 14746079 14750062 14746079 ID=Msa0152190;Name=Msa0152190
chr1_4 mRNA 14746079 14750062 14746079 ID=Msa0152190-mRNA-1;Parent=Msa0152190;Name=Msa0152190-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.66|0.71|1|0.83|0.85|7|513|367
chr1_4 exon 14746079 14746205 14746079 ID=Msa0152190-mRNA-1:exon:5766;Parent=Msa0152190-mRNA-1
chr1_4 exon 14746832 14746956 14746832 ID=Msa0152190-mRNA-1:exon:5767;Parent=Msa0152190-mRNA-1
chr1_4 exon 14747332 14747624 14747332 ID=Msa0152190-mRNA-1:exon:5768;Parent=Msa0152190-mRNA-1
chr1_4 exon 14747716 14747767 14747716 ID=Msa0152190-mRNA-1:exon:5769;Parent=Msa0152190-mRNA-1
chr1_4 exon 14748158 14748479 14748158 ID=Msa0152190-mRNA-1:exon:5770;Parent=Msa0152190-mRNA-1
chr1_4 exon 14748633 14748690 14748633 ID=Msa0152190-mRNA-1:exon:5771;Parent=Msa0152190-mRNA-1
chr1_4 exon 14749423 14750062 14749423 ID=Msa0152190-mRNA-1:exon:5772;Parent=Msa0152190-mRNA-1
chr1_4 CDS 14746079 14746205 14746079 ID=Msa0152190-mRNA-1:cds;Parent=Msa0152190-mRNA-1
chr1_4 CDS 14746832 14746956 14746832 ID=Msa0152190-mRNA-1:cds;Parent=Msa0152190-mRNA-1
chr1_4 CDS 14747332 14747624 14747332 ID=Msa0152190-mRNA-1:cds;Parent=Msa0152190-mRNA-1
chr1_4 CDS 14747716 14747767 14747716 ID=Msa0152190-mRNA-1:cds;Parent=Msa0152190-mRNA-1
chr1_4 CDS 14748158 14748479 14748158 ID=Msa0152190-mRNA-1:cds;Parent=Msa0152190-mRNA-1
chr1_4 CDS 14748633 14748690 14748633 ID=Msa0152190-mRNA-1:cds;Parent=Msa0152190-mRNA-1
chr1_4 CDS 14749423 14749549 14749423 ID=Msa0152190-mRNA-1:cds;Parent=Msa0152190-mRNA-1
chr1_4 three_prime_UTR 14749550 14750062 14749550 ID=Msa0152190-mRNA-1:three_prime_utr;Parent=Msa0152190-mRNA-1
Gene Sequence

>Msa0152190

ATGGAAAGAGATTTCTTGAGTCTTTGCTCAAAAGAATCATCACCTGAGATTAACAATGAAGGGTCAAAAAATTCAGGCATGTTTCTTTGCTTTTTTTTTTTTTGGAATTCTTTGAGCTTTAATTTTGGTTTTACGAATGTTTCAGCAGTAAAATGGCCCTTCTTGAACAAAGTCTCTGCTCATTCATATTTGACGCCTTTTAAAGTTTCTGAAGACGATAAGGCTAAAATGATATCTTCTGGTTTCATACAGAACTCTTTCAAACACGATGGACAAGGTGGTATTCATTTTTCTGTGAATCAGTATCCTGTACAACACAATGTGAATTTTATGAATCGTCATCATGATGTGAAGATGTTTCCAGTTTCCAATCAAGCAAATTCACTTTCTGCGGTACATCCGCTCCTAAAAAATCATCTTGTAACTTTTGGTCAGAATATGAACGGTGCTAATGCGAAGCAATCACTACTTGGTGGATCACCGGTTACAGCACCTCATTCAGTTCTTCCGATCGTTGGTACTGTTGCTGGTTTGGTTGAACCATGTGAGAAACCATCTGCACCTGCTCCTCAACTTACCATGTTTTATGGCGGTACTGCACAAGCCATCATGTTGTTGGCTGGAAGTGGCTTATCTGCAGCTTCAAACAGGGCTCAACCTGAAGTTCAGGCATCTAGCTCGAAATTCGCATCAGGTGATGATGGTTTGCCTATAAGTCCACCTGTAGACATACCACCCTGCTCTGGTATTTCAAGTCCTTTATCTGTTTCTTCACATACTGGTCCACAGCCAGGGAGTGGCTCAAGTAGCAGTGATGAGTTTATGGCTGCTAAAACATCTAGAGGCCCTACTCCTACCACATCTGCTTGCAAAGTTGTGACTCCCAAAGTAGTCAATGCAACCACCATGGTTCCATCAGCTATACCGCAGGCCCGCAAAGCATCATTGGCTCGATTTTTGGAGAAGCGCAAGGAAAGGGTGATGAGTACAGCACCATATAACCTCAACAAGAAATCTGAGGATGCACAAATGCCGAATTCAATAGGTGCTAACATCTCCGCGACCACTAGTACTGCTAATATGCCGGTAGCAAACCAAGGATAA

Protein sequence

>Msa0152190

MERDFLSLCSKESSPEINNEGSKNSGMFLCFFFFWNSLSFNFGFTNVSAVKWPFLNKVSAHSYLTPFKVSEDDKAKMISSGFIQNSFKHDGQGGIHFSVNQYPVQHNVNFMNRHHDVKMFPVSNQANSLSAVHPLLKNHLVTFGQNMNGANAKQSLLGGSPVTAPHSVLPIVGTVAGLVEPCEKPSAPAPQLTMFYGGTAQAIMLLAGSGLSAASNRAQPEVQASSSKFASGDDGLPISPPVDIPPCSGISSPLSVSSHTGPQPGSGSSSSDEFMAAKTSRGPTPTTSACKVVTPKVVNATTMVPSAIPQARKASLARFLEKRKERVMSTAPYNLNKKSEDAQMPNSIGANISATTSTANMPVANQG*