AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0033180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0033180 MtrunA17_Chr1g0191461 66.307 371 87 3 247 582 2 369 3.98e-168 482
Msa0033180 MtrunA17_Chr1g0191461 76.471 255 58 2 3 256 4 257 2.74e-135 399
Msa0033180 MtrunA17_Chr7g0273101 61.732 358 101 2 267 588 17 374 5.68e-151 439
Msa0033180 MtrunA17_Chr7g0273101 71.429 238 66 1 24 259 23 260 2.20e-116 350
Msa0033180 MtrunA17_Chr8g0381581 38.655 357 175 8 260 575 21 374 4.15e-76 247
Msa0033180 MtrunA17_Chr8g0381581 44.231 260 134 6 10 260 17 274 8.85e-65 217
Msa0033180 MtrunA17_Chr1g0160101 37.736 371 184 8 261 587 19 386 1.52e-75 245
Msa0033180 MtrunA17_Chr1g0160101 44.015 259 128 8 11 257 19 272 7.55e-60 204
Msa0033180 MtrunA17_Chr1g0159971 37.533 381 194 8 238 577 3 380 5.18e-73 239
Msa0033180 MtrunA17_Chr1g0159971 41.758 273 142 8 10 270 21 288 4.82e-59 202
Msa0033180 MtrunA17_Chr1g0160031 38.187 364 178 9 252 575 12 368 1.50e-72 237
Msa0033180 MtrunA17_Chr1g0160031 42.085 259 137 9 6 257 16 268 9.66e-56 192
Msa0033180 MtrunA17_Chr7g0254461 37.433 374 185 9 260 587 20 390 2.87e-72 237
Msa0033180 MtrunA17_Chr7g0254461 43.750 272 138 8 10 270 20 287 4.64e-62 210
Msa0033180 MtrunA17_Chr7g0271551 39.823 339 153 7 280 583 37 359 3.34e-71 233
Msa0033180 MtrunA17_Chr7g0271551 43.966 232 118 6 27 255 32 254 9.83e-50 176
Msa0033180 MtrunA17_Chr7g0226941 37.432 366 172 9 264 583 19 373 4.18e-71 233
Msa0033180 MtrunA17_Chr7g0226941 40.672 268 147 8 12 270 14 278 3.09e-57 197
Msa0033180 MtrunA17_Chr1g0159981 36.856 369 192 7 253 583 20 385 6.85e-69 228
Msa0033180 MtrunA17_Chr1g0159981 41.516 277 148 10 1 270 18 287 1.23e-54 190
Msa0033180 MtrunA17_Chr1g0160011 37.705 366 182 9 252 577 12 371 1.58e-68 227
Msa0033180 MtrunA17_Chr1g0160011 41.758 273 144 10 6 270 16 281 3.77e-55 191
Msa0033180 MtrunA17_Chr1g0159991 36.290 372 192 9 252 583 9 375 1.83e-67 224
Msa0033180 MtrunA17_Chr1g0159991 43.462 260 132 10 6 257 13 265 1.22e-56 195
Msa0033180 MtrunA17_Chr6g0450701 35.792 366 178 9 257 577 14 367 1.51e-61 208
Msa0033180 MtrunA17_Chr6g0450701 41.772 237 126 4 28 257 37 268 6.37e-54 187
Msa0033180 MtrunA17_Chr7g0275291 35.733 375 196 9 247 583 3 370 1.52e-61 208
Msa0033180 MtrunA17_Chr7g0275291 36.604 265 154 7 1 257 1 259 3.20e-43 159
Msa0033180 MtrunA17_Chr7g0226931 33.791 364 178 10 277 583 36 393 1.81e-57 198
Msa0033180 MtrunA17_Chr7g0226931 36.328 256 138 5 28 260 36 289 1.81e-41 154
Msa0033180 MtrunA17_Chr7g0226911 33.994 353 181 6 277 583 33 379 4.00e-56 194
Msa0033180 MtrunA17_Chr7g0226911 33.700 273 164 7 3 260 5 275 1.72e-38 145
Msa0033180 MtrunA17_Chr8g0352901 33.243 367 183 11 258 577 10 361 8.62e-55 190
Msa0033180 MtrunA17_Chr8g0352901 37.786 262 144 8 10 257 5 261 4.05e-48 172
Msa0033180 MtrunA17_Chr8g0347751 34.670 349 159 8 281 576 38 370 3.15e-53 186
Msa0033180 MtrunA17_Chr8g0347751 35.606 264 153 8 9 257 13 274 7.96e-41 152
Msa0033180 MtrunA17_Chr6g0450711 34.454 357 178 9 270 583 113 456 8.16e-53 187
Msa0033180 MtrunA17_Chr6g0450711 40.449 267 134 6 11 257 90 351 5.97e-52 184
Msa0033180 MtrunA17_Chr6g0450721 41.132 265 137 8 5 257 3 260 2.67e-51 180
Msa0033180 MtrunA17_Chr6g0450721 32.791 369 179 9 261 583 9 354 3.05e-47 169
Msa0033180 MtrunA17_Chr6g0450731 40.625 256 137 7 11 257 9 258 1.50e-47 170
Msa0033180 MtrunA17_Chr6g0450731 32.425 367 185 11 261 583 9 356 1.78e-44 162
Msa0033180 MtrunA17_Chr8g0339251 33.731 335 162 11 258 553 10 323 4.80e-46 165
Msa0033180 MtrunA17_Chr8g0339251 37.255 255 141 8 10 257 5 247 3.19e-45 163
Msa0033180 MtrunA17_Chr2g0301581 31.635 373 175 11 258 582 13 353 2.97e-38 144
Msa0033180 MtrunA17_Chr2g0301581 33.750 240 138 7 28 255 32 262 9.30e-27 112
Msa0033180 MtrunA17_Chr2g0283501 30.295 373 206 9 247 577 2 362 1.14e-37 143
Msa0033180 MtrunA17_Chr2g0283501 27.778 252 175 4 12 256 13 264 7.35e-22 97.8
Msa0033180 MtrunA17_Chr2g0301541 31.367 373 176 11 258 582 13 353 1.33e-37 142
Msa0033180 MtrunA17_Chr2g0301541 33.333 240 139 7 28 255 32 262 2.28e-25 107
Msa0033180 MtrunA17_Chr3g0104821 32.687 361 178 13 270 582 37 380 5.30e-37 142
Msa0033180 MtrunA17_Chr3g0104821 35.417 240 139 7 28 257 42 275 8.88e-28 115
Msa0033180 MtrunA17_Chr0c01g0489581 29.551 379 179 13 258 582 7 351 3.94e-34 133
Msa0033180 MtrunA17_Chr0c01g0489581 31.373 255 146 8 18 257 19 259 2.47e-23 102
Msa0033180 MtrunA17_Chr2g0317271 29.288 379 180 12 258 582 7 351 4.43e-34 132
Msa0033180 MtrunA17_Chr2g0317271 30.980 255 147 8 18 257 19 259 2.01e-23 102
Msa0033180 MtrunA17_Chr2g0317261 29.365 378 181 12 258 582 7 351 5.18e-34 132
Msa0033180 MtrunA17_Chr2g0317261 30.980 255 147 8 18 257 19 259 1.44e-23 102
Msa0033180 MtrunA17_Chr0c01g0489571 29.551 379 179 13 258 582 7 351 1.13e-33 131
Msa0033180 MtrunA17_Chr0c01g0489571 31.373 255 146 8 18 257 19 259 2.03e-23 102
Msa0033180 MtrunA17_Chr4g0057991 29.041 365 198 11 258 577 16 364 3.55e-30 122
Msa0033180 MtrunA17_Chr4g0057991 26.971 241 153 7 28 256 37 266 3.54e-14 74.7
Msa0033180 MtrunA17_Chr3g0112821 30.595 353 178 13 269 575 20 351 3.96e-30 122
Msa0033180 MtrunA17_Chr3g0112821 32.653 245 135 10 28 256 28 258 9.15e-23 100
Msa0033180 MtrunA17_Chr2g0283531 26.761 355 196 8 269 575 21 359 4.41e-30 122
Msa0033180 MtrunA17_Chr2g0283531 30.328 244 146 9 28 256 29 263 4.11e-23 101
Msa0033180 MtrunA17_Chr3g0093031 30.919 359 174 14 269 575 20 356 1.77e-28 117
Msa0033180 MtrunA17_Chr3g0093031 32.245 245 136 10 28 256 28 258 2.27e-21 96.3
Msa0033180 MtrunA17_Chr3g0112691 30.791 354 183 15 269 577 20 356 2.37e-28 116
Msa0033180 MtrunA17_Chr3g0112691 31.538 260 157 11 28 277 28 276 1.86e-18 87.4
Msa0033180 MtrunA17_Chr3g0096551 30.649 385 190 16 258 582 7 374 1.03e-27 115
Msa0033180 MtrunA17_Chr3g0096551 30.075 266 161 9 5 256 4 258 1.48e-22 100
Msa0033180 MtrunA17_Chr2g0283481 28.883 367 191 13 260 575 28 375 1.45e-27 115
Msa0033180 MtrunA17_Chr2g0283481 31.452 248 143 8 27 256 44 282 5.50e-23 101
Msa0033180 MtrunA17_Chr2g0283511 28.736 348 174 12 284 577 36 363 3.26e-27 114
Msa0033180 MtrunA17_Chr2g0283511 30.738 244 135 9 35 256 36 267 5.92e-21 95.1
Msa0033180 MtrunA17_Chr7g0273111 61.039 77 29 1 2 78 8 83 4.77e-26 102
Msa0033180 MtrunA17_Chr7g0273111 64.706 68 24 0 260 327 16 83 6.04e-24 96.7
Msa0033180 MtrunA17_Chr2g0301591 32.218 239 129 6 28 255 32 248 6.68e-25 105
Msa0033180 MtrunA17_Chr2g0301591 31.783 258 153 7 258 492 13 270 8.15e-24 101
Msa0033180 MtrunA17_Chr5g0396511 26.361 349 185 15 281 583 48 370 1.41e-23 103
Msa0033180 MtrunA17_Chr5g0396511 26.459 257 157 14 32 273 48 287 8.25e-13 70.5
Msa0033180 MtrunA17_Chr3g0120861 25.449 334 193 10 278 573 37 352 1.19e-22 100
Msa0033180 MtrunA17_Chr3g0120861 28.571 203 128 7 29 221 37 232 1.39e-14 75.5
Msa0033180 MtrunA17_Chr8g0349341 26.630 368 213 14 247 576 2 350 1.39e-22 99.8
Msa0033180 MtrunA17_Chr8g0349341 27.451 255 155 10 10 255 19 252 4.89e-16 80.1
Msa0033180 MtrunA17_Chr1g0191501 92.683 41 3 0 512 552 1 41 1.95e-21 89.0
Msa0033180 MtrunA17_Chr2g0301641 27.844 334 185 13 281 575 45 361 2.46e-21 96.7
Msa0033180 MtrunA17_Chr2g0301641 30.374 214 124 8 19 221 35 234 1.34e-17 85.1
Msa0033180 MtrunA17_Chr5g0432101 28.375 363 182 15 260 570 10 346 5.35e-21 95.1
Msa0033180 MtrunA17_Chr5g0432101 29.412 255 127 11 27 255 30 257 1.51e-15 78.6
Msa0033180 MtrunA17_Chr5g0438621 26.409 337 186 12 278 573 29 344 6.64e-21 94.7
Msa0033180 MtrunA17_Chr5g0438621 25.926 270 161 12 12 258 3 256 7.82e-15 76.3
Msa0033180 MtrunA17_Chr1g0156901 26.776 366 203 13 250 573 21 363 1.20e-20 94.0
Msa0033180 MtrunA17_Chr1g0156901 29.389 262 159 11 8 255 24 273 6.96e-15 76.6
Msa0033180 MtrunA17_Chr1g0191481 93.023 43 3 0 261 303 12 54 3.32e-20 85.1
Msa0033180 MtrunA17_Chr1g0191481 76.364 55 11 2 1 54 1 54 9.18e-18 78.2
Msa0033180 MtrunA17_Chr5g0438631 24.242 363 211 12 255 573 1 343 7.95e-20 91.3
Msa0033180 MtrunA17_Chr5g0438631 26.556 241 154 9 29 258 27 255 7.23e-12 67.4
Msa0033180 MtrunA17_Chr3g0142921 29.052 327 180 13 274 564 31 341 1.79e-19 90.5
Msa0033180 MtrunA17_Chr3g0142921 29.388 245 144 10 25 255 31 260 1.12e-15 79.0
Msa0033180 MtrunA17_Chr5g0420811 29.104 268 151 11 1 252 1 245 2.43e-19 89.7
Msa0033180 MtrunA17_Chr8g0374101 25.648 347 187 14 279 576 37 361 2.85e-19 90.1
Msa0033180 MtrunA17_Chr8g0374101 26.693 251 145 11 30 258 37 270 5.09e-12 67.8
Msa0033180 MtrunA17_Chr8g0349321 25.683 366 202 15 258 576 8 350 2.88e-19 89.7
Msa0033180 MtrunA17_Chr3g0131321 27.729 339 180 12 281 575 36 353 4.84e-19 89.4
Msa0033180 MtrunA17_Chr3g0131321 29.200 250 147 10 5 234 6 245 5.46e-15 77.0
Msa0033180 MtrunA17_Chr1g0156911 25.298 336 188 11 276 570 34 347 1.90e-18 87.4
Msa0033180 MtrunA17_Chr1g0156911 28.163 245 142 11 27 255 34 260 4.74e-14 73.9
Msa0033180 MtrunA17_Chr2g0283191 23.513 353 203 11 258 562 17 350 1.98e-18 87.4
Msa0033180 MtrunA17_Chr2g0283191 24.335 263 175 9 11 257 15 269 2.26e-13 72.0
Msa0033180 MtrunA17_Chr8g0341001 25.148 338 198 11 274 573 27 347 2.83e-18 86.7
Msa0033180 MtrunA17_Chr8g0341001 26.688 311 184 13 1 286 4 295 1.22e-14 75.9
Msa0033180 MtrunA17_Chr1g0191491 81.395 43 8 0 200 242 50 92 3.35e-18 79.7
Msa0033180 MtrunA17_Chr1g0156931 26.377 345 193 13 274 579 36 358 4.78e-18 86.3
Msa0033180 MtrunA17_Chr1g0156931 25.362 276 164 12 1 255 9 263 2.52e-11 65.5
Msa0033180 MtrunA17_Chr3g0104801 52.222 90 38 3 28 113 42 130 5.58e-18 82.0
Msa0033180 MtrunA17_Chr3g0104801 41.791 134 68 5 277 400 42 175 7.21e-16 75.9
Msa0033180 MtrunA17_Chr3g0104831 26.518 313 171 10 314 582 2 299 6.95e-18 84.7
Msa0033180 MtrunA17_Chr4g0068441 25.070 355 207 10 261 575 17 352 7.20e-18 85.9
Msa0033180 MtrunA17_Chr4g0068441 25.475 263 171 9 6 256 11 260 1.17e-13 72.8
Msa0033180 MtrunA17_Chr2g0301551 28.105 306 140 11 325 582 36 309 1.15e-17 84.3
Msa0033180 MtrunA17_Chr8g0349331 26.361 349 206 16 247 576 2 318 1.29e-17 84.3
Msa0033180 MtrunA17_Chr5g0438641 23.496 349 211 10 263 573 16 346 1.34e-17 84.7
Msa0033180 MtrunA17_Chr8g0344931 28.966 290 153 10 27 287 34 299 2.93e-17 84.0
Msa0033180 MtrunA17_Chr8g0344931 27.139 339 173 11 281 576 39 346 3.07e-17 83.6
Msa0033180 MtrunA17_Chr2g0320671 26.786 336 186 15 278 573 29 344 3.22e-17 83.6
Msa0033180 MtrunA17_Chr2g0294311 24.668 377 193 17 259 576 14 358 4.05e-17 83.6
Msa0033180 MtrunA17_Chr2g0294311 24.561 285 159 12 4 258 9 267 7.60e-14 73.6
Msa0033180 MtrunA17_Chr8g0380031 28.253 269 164 9 1 256 56 308 4.46e-17 83.6
Msa0033180 MtrunA17_Chr2g0301571 28.479 309 139 13 325 585 36 310 4.55e-17 82.4
Msa0033180 MtrunA17_Chr3g0099231 24.444 360 203 14 260 575 11 345 1.11e-16 82.4
Msa0033180 MtrunA17_Chr3g0099231 26.721 247 147 10 29 258 27 256 2.56e-11 65.9
Msa0033180 MtrunA17_Chr1g0156891 25.145 346 198 14 274 579 38 362 1.33e-16 81.6
Msa0033180 MtrunA17_Chr1g0156891 27.138 269 167 11 3 256 14 268 1.17e-14 75.9
Msa0033180 MtrunA17_Chr8g0349301 26.148 283 156 9 282 534 52 311 1.53e-16 80.9
Msa0033180 MtrunA17_Chr8g0349301 26.724 232 141 9 30 252 37 248 3.42e-13 70.9
Msa0033180 MtrunA17_Chr7g0275021 26.266 316 195 10 12 304 16 316 2.00e-16 81.3
Msa0033180 MtrunA17_Chr8g0380041 23.360 381 225 10 250 587 2 358 4.26e-16 80.1
Msa0033180 MtrunA17_Chr2g0330781 24.340 341 197 12 274 573 26 346 5.45e-16 79.7
Msa0033180 MtrunA17_Chr2g0330781 25.606 289 176 10 21 286 22 294 2.50e-12 68.6
Msa0033180 MtrunA17_Chr8g0344941 31.120 241 146 10 27 256 38 269 6.48e-16 79.7
Msa0033180 MtrunA17_Chr8g0344941 25.676 370 213 16 252 576 9 361 7.68e-15 76.6
Msa0033180 MtrunA17_Chr3g0099161 24.750 400 234 16 220 575 34 410 6.66e-16 80.1
Msa0033180 MtrunA17_Chr3g0099161 25.455 275 170 9 1 256 61 319 3.53e-11 65.5
Msa0033180 MtrunA17_Chr8g0371491 25.937 347 199 12 265 573 24 350 2.08e-15 78.2
Msa0033180 MtrunA17_Chr2g0283541 24.783 230 127 6 383 575 65 285 4.30e-15 76.3
Msa0033180 MtrunA17_Chr7g0275011 28.626 262 158 9 8 255 12 258 9.46e-15 76.3
Msa0033180 MtrunA17_Chr5g0434621 24.242 330 192 12 283 574 29 338 9.25e-14 73.2
Msa0033180 MtrunA17_Chr5g0434621 24.579 297 198 10 11 295 6 288 5.54e-11 64.3
Msa0033180 MtrunA17_Chr3g0085881 25.523 239 154 7 29 258 32 255 1.56e-13 72.4
Msa0033180 MtrunA17_Chr4g0046151 25.391 256 172 9 11 256 17 263 1.62e-13 72.4
Msa0033180 MtrunA17_Chr3g0099151 23.464 358 211 12 259 575 71 406 6.12e-13 70.9
Msa0033180 MtrunA17_Chr3g0099151 26.794 209 128 7 29 220 86 286 4.87e-11 65.1
Msa0033180 MtrunA17_Chr3g0105401 26.108 203 134 6 29 221 27 223 8.76e-13 70.1
Msa0033180 MtrunA17_Chr3g0085231 26.446 242 146 9 29 255 30 254 1.80e-12 68.9
Msa0033180 MtrunA17_Chr1g0189891 29.032 248 147 10 11 238 5 243 2.31e-12 68.9
Msa0033180 MtrunA17_Chr4g0027521 28.287 251 141 11 29 260 26 256 2.54e-12 68.6
Msa0033180 MtrunA17_Chr6g0457921 26.446 242 148 8 34 260 33 259 3.39e-12 68.2
Msa0033180 MtrunA17_Chr2g0284991 24.629 337 197 11 4 323 7 303 4.16e-12 68.2
Msa0033180 MtrunA17_Chr2g0284951 27.347 245 142 9 29 256 32 257 5.09e-12 67.8
Msa0033180 MtrunA17_Chr3g0142941 26.971 241 156 8 25 256 42 271 1.13e-11 66.6
Msa0033180 MtrunA17_Chr8g0370951 25.000 268 148 11 10 243 7 255 1.88e-11 66.2
Msa0033180 MtrunA17_Chr5g0437421 27.046 281 172 11 29 286 31 301 2.05e-11 65.9
Msa0033180 MtrunA17_Chr2g0285061 26.545 275 166 12 1 258 4 259 2.19e-11 65.9
Msa0033180 MtrunA17_Chr7g0274991 24.781 343 211 13 2 321 5 323 3.15e-11 65.5
Msa0033180 MtrunA17_Chr5g0444401 23.626 364 206 14 258 576 11 347 3.79e-11 65.1
Msa0033180 MtrunA17_Chr2g0294301 24.419 258 148 10 24 258 29 262 4.81e-11 64.7
Msa0033180 MtrunA17_Chr2g0285001 26.613 248 145 9 29 258 32 260 6.95e-11 64.3
Msa0033180 MtrunA17_Chr4g0017431 25.185 270 180 9 3 262 5 262 7.66e-11 64.3
Msa0033180 MtrunA17_Chr3g0086641 24.444 270 166 10 10 258 12 264 9.09e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0033180 AT1G54790.1 55.586 367 127 2 258 588 10 376 1.24e-141 416
Msa0033180 AT1G54790.1 60.156 256 100 1 3 256 4 259 6.75e-107 327
Msa0033180 AT1G54790.2 51.908 393 127 3 258 588 10 402 1.02e-135 402
Msa0033180 AT1G54790.2 60.156 256 100 1 3 256 4 259 1.16e-106 327
Msa0033180 AT1G54790.3 53.406 367 133 3 260 588 11 377 5.47e-133 394
Msa0033180 AT1G54790.3 58.498 253 101 2 8 256 8 260 5.51e-104 319
Msa0033180 AT3G05180.1 48.718 351 142 4 268 580 23 373 3.15e-106 325
Msa0033180 AT3G05180.1 55.411 231 101 2 28 256 34 264 1.09e-83 266
Msa0033180 AT1G09390.1 39.157 332 154 7 278 574 36 354 1.28e-70 232
Msa0033180 AT1G09390.1 43.162 234 123 5 29 259 36 262 2.78e-53 186
Msa0033180 AT3G26430.1 38.933 375 185 8 252 585 4 375 3.33e-70 231
Msa0033180 AT3G26430.1 43.820 267 141 7 1 260 1 265 2.15e-61 208
Msa0033180 AT3G62280.1 37.798 336 157 7 278 577 35 354 2.78e-68 226
Msa0033180 AT3G62280.1 41.202 233 127 4 29 259 35 259 1.00e-50 179
Msa0033180 AT1G56670.1 37.725 334 162 6 278 577 39 360 8.61e-68 225
Msa0033180 AT1G56670.1 42.918 233 125 4 29 259 39 265 5.80e-53 185
Msa0033180 AT5G14450.1 35.933 359 180 8 260 575 22 373 1.99e-65 219
Msa0033180 AT5G14450.1 42.308 260 138 7 11 260 20 277 9.80e-59 201
Msa0033180 AT1G67830.1 35.588 340 175 8 277 575 28 364 1.72e-62 211
Msa0033180 AT1G67830.1 44.770 239 124 5 28 260 28 264 1.71e-59 202
Msa0033180 AT4G01130.1 37.574 338 164 6 281 576 36 368 1.01e-59 204
Msa0033180 AT4G01130.1 39.565 230 132 5 28 252 32 259 8.42e-42 155
Msa0033180 AT3G27950.1 37.222 360 171 9 270 587 23 369 5.36e-59 201
Msa0033180 AT3G27950.1 46.610 236 116 6 27 257 29 259 3.32e-53 186
Msa0033180 AT1G56670.2 42.918 233 125 4 29 259 39 265 4.76e-54 186
Msa0033180 AT1G56670.2 36.122 263 130 4 278 506 39 297 1.34e-43 158
Msa0033180 AT3G62280.2 41.202 233 127 4 29 259 35 259 1.09e-51 179
Msa0033180 AT3G62280.2 35.688 269 129 5 278 510 35 295 7.19e-44 158
Msa0033180 AT4G01130.2 39.485 233 128 6 28 252 32 259 1.77e-42 155
Msa0033180 AT4G01130.2 34.191 272 132 6 277 506 32 298 4.78e-33 129
Msa0033180 AT4G01130.3 34.266 286 142 5 333 576 1 282 1.22e-41 152
Msa0033180 AT4G01130.3 34.483 174 108 4 84 252 1 173 2.49e-22 98.2
Msa0033180 AT1G28600.1 31.356 354 175 16 276 579 28 363 4.17e-34 134
Msa0033180 AT1G28600.1 29.658 263 155 12 1 246 4 253 1.06e-20 95.1
Msa0033180 AT1G28610.2 29.885 348 178 11 279 577 31 361 2.05e-31 126
Msa0033180 AT1G28610.2 31.405 242 142 10 30 256 31 263 3.23e-21 96.3
Msa0033180 AT3G48460.1 29.070 344 179 11 281 577 40 365 2.25e-31 126
Msa0033180 AT3G48460.1 26.568 271 164 10 6 256 13 268 3.35e-17 84.3
Msa0033180 AT1G28580.1 29.494 356 176 13 276 577 34 368 4.23e-31 125
Msa0033180 AT1G28580.1 28.626 262 155 11 6 246 10 260 5.23e-19 89.7
Msa0033180 AT2G27360.1 28.877 374 198 13 255 577 9 365 5.85e-31 125
Msa0033180 AT2G27360.1 30.078 256 153 11 18 256 21 267 4.15e-20 93.2
Msa0033180 AT1G31550.2 29.201 363 189 13 265 577 22 366 1.65e-30 124
Msa0033180 AT1G31550.2 31.452 248 142 11 27 257 33 269 1.14e-19 92.0
Msa0033180 AT5G45910.1 27.688 372 211 11 253 577 6 366 8.61e-29 118
Msa0033180 AT5G45910.1 28.287 251 151 9 26 256 26 267 3.60e-15 77.8
Msa0033180 AT1G28590.1 28.647 377 189 15 260 577 12 367 1.08e-28 119
Msa0033180 AT1G28590.1 27.306 271 168 11 7 257 9 270 8.09e-19 89.4
Msa0033180 AT1G31550.1 28.453 362 190 13 265 577 22 363 3.73e-28 117
Msa0033180 AT1G31550.1 31.452 248 142 11 27 257 33 269 1.02e-19 92.0
Msa0033180 AT1G28570.1 29.235 366 190 15 263 577 18 365 4.55e-28 116
Msa0033180 AT1G28570.1 28.309 272 165 12 4 256 7 267 1.86e-18 88.2
Msa0033180 AT1G28650.1 27.151 372 202 13 258 577 14 368 1.01e-26 112
Msa0033180 AT1G28650.1 28.782 271 171 9 1 256 7 270 9.40e-20 92.0
Msa0033180 AT1G28640.1 26.667 375 206 12 255 577 9 366 1.91e-25 108
Msa0033180 AT1G28640.1 28.413 271 165 11 10 258 14 277 7.17e-18 86.3
Msa0033180 AT1G28660.2 27.793 367 211 12 255 577 9 365 2.81e-25 108
Msa0033180 AT1G28660.2 26.894 264 166 10 10 256 14 267 6.13e-12 68.2
Msa0033180 AT4G10950.2 25.356 351 198 13 278 586 70 398 5.38e-25 108
Msa0033180 AT4G10950.2 28.696 230 126 12 29 237 70 282 6.07e-17 83.6
Msa0033180 AT1G28660.1 27.717 368 211 13 255 577 9 366 1.55e-24 106
Msa0033180 AT1G28660.1 27.547 265 164 10 10 256 14 268 1.75e-12 69.7
Msa0033180 AT4G10950.1 25.356 351 194 14 278 586 70 394 2.46e-23 103
Msa0033180 AT4G10950.1 28.696 230 122 13 29 237 70 278 2.14e-15 79.0
Msa0033180 AT1G28670.1 26.330 376 207 13 255 577 9 367 4.90e-22 99.0
Msa0033180 AT1G28670.1 29.151 271 164 10 10 258 14 278 8.31e-17 83.2
Msa0033180 AT1G53920.1 25.000 352 214 10 266 582 35 371 2.04e-20 94.0
Msa0033180 AT1G53920.1 27.698 278 170 8 25 285 43 306 1.95e-14 75.9
Msa0033180 AT4G26790.1 25.000 336 196 10 276 573 26 343 2.15e-20 93.6
Msa0033180 AT4G26790.1 26.423 246 149 10 27 257 26 254 3.82e-15 77.8
Msa0033180 AT4G26790.2 25.000 336 196 10 276 573 26 343 2.15e-20 93.6
Msa0033180 AT4G26790.2 26.423 246 149 10 27 257 26 254 3.82e-15 77.8
Msa0033180 AT2G42990.1 26.205 332 189 10 278 571 27 340 3.60e-20 92.8
Msa0033180 AT2G42990.1 26.378 254 167 8 12 256 10 252 8.60e-15 76.6
Msa0033180 AT2G23540.1 25.661 378 200 15 258 576 17 372 1.04e-19 92.0
Msa0033180 AT2G23540.1 27.092 251 144 11 30 258 48 281 6.32e-11 65.1
Msa0033180 AT2G04570.1 23.757 362 220 10 254 577 3 346 1.14e-19 91.3
Msa0033180 AT2G04570.1 25.704 284 183 12 8 278 4 272 1.49e-13 72.8
Msa0033180 AT1G20120.1 25.588 340 189 10 276 573 75 392 3.14e-19 90.5
Msa0033180 AT1G20120.1 29.167 240 146 8 27 255 75 301 5.29e-15 77.8
Msa0033180 AT5G22810.1 27.596 337 187 11 278 574 33 352 4.77e-19 89.7
Msa0033180 AT5G22810.1 29.707 239 147 9 29 256 33 261 6.76e-15 77.0
Msa0033180 AT3G16370.1 26.036 338 187 10 278 573 29 345 1.80e-18 87.8
Msa0033180 AT3G16370.1 26.962 293 163 12 29 292 29 299 2.35e-12 69.3
Msa0033180 AT3G53100.1 27.003 337 184 13 278 573 28 343 3.63e-18 86.7
Msa0033180 AT3G53100.1 27.239 268 163 10 4 257 5 254 1.39e-14 75.9
Msa0033180 AT1G71120.1 25.507 345 184 10 276 576 28 343 1.01e-17 85.5
Msa0033180 AT1G71120.1 24.597 248 146 9 27 257 28 251 5.10e-11 65.1
Msa0033180 AT1G28580.2 27.798 277 137 10 347 577 28 287 1.27e-17 84.3
Msa0033180 AT1G75900.1 26.765 340 191 14 278 579 42 361 3.05e-17 84.3
Msa0033180 AT1G75900.1 27.459 244 142 9 29 256 42 266 7.50e-11 64.7
Msa0033180 AT5G15720.2 27.612 268 154 10 29 281 29 271 6.37e-17 82.4
Msa0033180 AT5G15720.1 27.612 268 154 10 29 281 29 271 1.07e-16 82.4
Msa0033180 AT5G03810.1 25.223 337 191 13 278 573 29 345 1.87e-16 81.6
Msa0033180 AT5G03810.1 25.911 247 152 10 29 260 29 259 2.87e-12 68.9
Msa0033180 AT2G19060.1 30.147 272 147 11 13 267 13 258 2.74e-16 81.3
Msa0033180 AT3G14820.1 24.054 370 222 12 251 580 1 351 3.62e-16 80.9
Msa0033180 AT3G14820.1 25.651 269 171 9 1 256 1 253 1.81e-11 66.2
Msa0033180 AT5G08460.1 28.033 239 150 8 28 255 47 274 4.49e-16 80.9
Msa0033180 AT5G08460.1 24.033 362 213 12 258 576 28 370 3.23e-15 78.2
Msa0033180 AT1G20130.1 25.220 341 203 11 278 579 203 530 9.77e-16 80.9
Msa0033180 AT1G20130.1 29.839 248 137 11 29 255 203 434 4.35e-11 66.2
Msa0033180 AT1G28570.2 29.596 223 109 9 394 577 80 293 9.79e-16 79.0
Msa0033180 AT3G14225.1 25.161 310 180 12 304 575 66 361 1.02e-15 79.7
Msa0033180 AT3G14225.2 25.490 306 180 11 304 575 66 357 1.14e-15 79.3
Msa0033180 AT3G14225.2 25.703 249 145 10 30 261 37 262 9.66e-11 64.3
Msa0033180 AT5G45960.1 27.386 241 156 9 27 257 44 275 1.32e-15 79.3
Msa0033180 AT5G45960.1 23.313 326 186 12 283 564 51 356 2.02e-13 72.8
Msa0033180 AT1G20130.2 24.928 345 199 12 278 579 183 510 1.35e-15 80.1
Msa0033180 AT1G20130.2 29.839 248 137 11 29 255 183 414 6.55e-11 65.5
Msa0033180 AT1G28600.2 30.189 212 124 10 1 199 4 204 1.59e-15 76.6
Msa0033180 AT1G28600.2 30.319 188 109 9 276 450 28 206 8.07e-14 71.6
Msa0033180 AT1G29660.1 29.289 239 143 10 29 255 31 255 1.72e-15 79.0
Msa0033180 AT2G40250.1 25.630 238 162 7 30 258 36 267 5.09e-15 77.4
Msa0033180 AT2G03980.2 30.000 210 128 8 27 227 40 239 5.50e-15 77.4
Msa0033180 AT2G03980.3 30.000 210 128 8 27 227 40 239 5.50e-15 77.4
Msa0033180 AT2G03980.1 30.000 210 128 8 27 227 40 239 5.50e-15 77.4
Msa0033180 AT2G03980.4 30.000 210 128 8 27 227 40 239 5.50e-15 77.4
Msa0033180 AT1G28570.3 38.400 125 67 5 454 577 87 202 6.22e-15 74.7
Msa0033180 AT5G03820.1 23.599 339 195 12 278 573 32 349 8.73e-15 76.6
Msa0033180 AT5G03820.1 24.180 244 155 8 29 257 32 260 1.43e-11 66.6
Msa0033180 AT5G03820.2 23.404 376 222 14 241 573 25 377 1.13e-14 76.6
Msa0033180 AT5G03820.2 24.180 244 155 8 29 257 60 288 1.49e-11 67.0
Msa0033180 AT1G75920.2 30.088 226 137 9 8 221 7 223 1.94e-14 75.5
Msa0033180 AT3G50400.1 26.183 317 187 12 19 303 23 324 2.36e-14 75.5
Msa0033180 AT1G71691.3 27.966 236 149 8 29 256 54 276 2.65e-14 74.7
Msa0033180 AT1G71691.2 27.966 236 149 8 29 256 54 276 4.59e-14 74.7
Msa0033180 AT1G29670.1 26.820 261 164 10 10 258 12 257 6.21e-14 73.9
Msa0033180 AT5G63170.1 28.358 268 164 12 1 257 1 251 6.23e-14 73.9
Msa0033180 AT1G29670.2 26.820 261 164 10 10 258 80 325 1.03e-13 73.9
Msa0033180 AT5G41890.1 24.646 353 188 13 279 576 31 360 1.17e-13 73.2
Msa0033180 AT5G41890.1 26.016 246 141 9 32 255 33 259 4.61e-11 65.5
Msa0033180 AT1G59406.1 27.985 268 158 11 6 255 1 251 1.98e-13 72.4
Msa0033180 AT1G59030.1 27.985 268 158 11 6 255 1 251 1.98e-13 72.4
Msa0033180 AT1G58725.1 27.985 268 158 11 6 255 1 251 1.98e-13 72.4
Msa0033180 AT5G40990.1 24.925 333 198 11 281 575 39 357 2.42e-13 72.4
Msa0033180 AT5G40990.1 31.019 216 127 9 16 220 25 229 5.10e-13 71.2
Msa0033180 AT1G53940.2 26.126 333 194 12 281 575 41 359 2.54e-13 72.4
Msa0033180 AT1G53940.2 31.373 204 116 8 30 220 39 231 9.63e-11 64.3
Msa0033180 AT4G16233.1 33.607 122 69 2 455 576 6 115 4.42e-13 67.0
Msa0033180 AT1G75920.1 29.461 241 134 10 8 221 2 233 5.90e-13 70.9
Msa0033180 AT1G20132.1 28.862 246 139 9 29 257 60 286 7.45e-13 70.9
Msa0033180 AT1G06990.1 26.459 257 164 9 14 257 20 264 8.98e-13 70.5
Msa0033180 AT3G43550.1 26.866 268 166 9 1 255 1 251 9.05e-13 69.7
Msa0033180 AT1G58520.3 28.000 250 151 9 20 255 17 251 9.86e-13 70.1
Msa0033180 AT1G58525.1 28.000 250 151 9 20 255 17 251 9.86e-13 70.1
Msa0033180 AT1G28610.1 28.877 187 113 6 279 453 31 209 1.13e-12 68.6
Msa0033180 AT1G28610.1 30.055 183 106 8 30 199 31 204 1.42e-12 68.6
Msa0033180 AT3G43570.1 25.215 349 202 17 260 584 5 318 1.23e-12 69.7
Msa0033180 AT1G20135.1 28.788 264 160 12 1 252 1 248 1.32e-12 69.7
Msa0033180 AT2G31540.1 26.667 270 161 10 8 258 13 264 1.67e-12 69.7
Msa0033180 AT2G31540.1 23.214 336 184 13 277 564 33 342 2.11e-12 69.3
Msa0033180 AT1G54000.1 28.194 227 133 8 30 246 36 242 2.10e-12 69.7
Msa0033180 AT4G16230.1 25.000 260 157 11 11 247 3 247 8.28e-12 66.2
Msa0033180 AT4G28780.1 25.223 337 198 11 281 579 33 353 9.05e-12 67.4
Msa0033180 AT4G28780.1 27.308 260 156 10 6 252 13 252 3.20e-11 65.9
Msa0033180 AT1G54020.2 27.234 235 130 9 29 248 30 238 1.06e-11 67.4
Msa0033180 AT2G04020.1 28.372 215 126 8 27 227 40 240 1.10e-11 65.9
Msa0033180 AT1G75890.2 26.820 261 160 13 12 255 25 271 1.25e-11 67.0
Msa0033180 AT4G18970.1 24.380 242 152 8 29 255 27 252 1.37e-11 67.0
Msa0033180 AT4G18970.2 24.380 242 152 8 29 255 27 252 1.67e-11 67.0
Msa0033180 AT1G75890.3 26.820 261 160 13 12 255 54 300 1.71e-11 66.6
Msa0033180 AT2G04020.2 28.372 215 126 8 27 227 40 240 1.96e-11 65.9
Msa0033180 AT2G19010.1 26.370 292 168 11 11 285 11 272 2.07e-11 66.2
Msa0033180 AT5G33370.2 26.471 272 165 11 1 255 1 254 2.18e-11 65.9
Msa0033180 AT5G33370.1 26.471 272 165 11 1 255 1 254 2.43e-11 66.2
Msa0033180 AT1G75910.1 27.876 226 146 8 6 221 5 223 2.79e-11 65.9
Msa0033180 AT5G45670.1 25.468 267 163 10 9 255 3 253 3.03e-11 65.9
Msa0033180 AT2G19010.2 26.736 288 164 11 15 285 45 302 3.52e-11 65.9
Msa0033180 AT3G14210.1 27.876 226 133 8 30 245 36 241 4.82e-11 65.5
Msa0033180 AT5G45950.1 24.893 233 150 7 30 252 40 257 5.09e-11 65.1
Msa0033180 AT1G75890.1 25.632 277 156 13 12 255 25 284 5.14e-11 65.1
Msa0033180 AT1G53940.1 31.373 204 116 8 30 220 39 231 6.02e-11 64.3

Find 134 sgRNAs with CRISPR-Local

Find 624 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCATTCTTAAATGCCTATT+TGG 0.166109 1_1:+60527441 Msa0033180:CDS
TTGCATCCATGATGGAAATT+TGG 0.222329 1_1:-60527478 None:intergenic
GGAGAAACAAAGGTCTTAAA+TGG 0.231574 1_1:+60528456 Msa0033180:CDS
TGCCAAATTGGGCAATAAAA+TGG 0.233112 1_1:-60523741 None:intergenic
CCCGTTCAGCTTTGGGGTTC+AGG 0.235086 1_1:+60523206 Msa0033180:CDS
GCCATTCTTAAATGCCTATA+TGG 0.252973 1_1:+60523095 Msa0033180:CDS
TCCGTTCAGCTTTGGGGTTC+AGG 0.255282 1_1:+60527552 Msa0033180:CDS
GGATCAGCCCGTTCAGCTTT+GGG 0.256453 1_1:+60523199 Msa0033180:CDS
CTCAATTCCAACAATTCTAT+TGG 0.263960 1_1:+60523508 Msa0033180:CDS
CTCAATTCCAACAATTCTAT+TGG 0.263960 1_1:+60527857 Msa0033180:CDS
GGATCAGTCCGTTCAGCTTT+GGG 0.265740 1_1:+60527545 Msa0033180:CDS
ATCTTGCAGATGTAGATTAA+AGG 0.270682 1_1:-60523824 None:intergenic
GGAATTTGAAACTGGAATAA+AGG 0.284630 1_1:+60523529 Msa0033180:CDS
GGAATTTGAAACTGGAATAA+AGG 0.284630 1_1:+60527878 Msa0033180:CDS
CGGATCAGCCCGTTCAGCTT+TGG 0.291008 1_1:+60523198 Msa0033180:CDS
ATTATGGCTTGTTGTGGATA+TGG 0.307425 1_1:+60528396 Msa0033180:CDS
CCCCTTCTCGAAATAATCTT+TGG 0.307718 1_1:-60527760 None:intergenic
TTGATGGGTCAGTGCCAAAT+TGG 0.311918 1_1:-60523753 None:intergenic
TTGGAATTGAGGCAATTATT+TGG 0.312495 1_1:-60523496 None:intergenic
CGGATCAGTCCGTTCAGCTT+TGG 0.315057 1_1:+60527544 Msa0033180:CDS
TATCCACAACAAGCCATAAT+TGG 0.319047 1_1:-60528393 None:intergenic
CCTAGTTCATCAAGCTTTGA+TGG 0.328742 1_1:-60523769 None:intergenic
AATGCCTATTTGGATTCATT+TGG 0.331617 1_1:+60527451 Msa0033180:CDS
ATTCTATTGGAATTTGAAAC+TGG 0.334096 1_1:+60523521 Msa0033180:CDS
ATTCTATTGGAATTTGAAAC+TGG 0.334096 1_1:+60527870 Msa0033180:CDS
CGGGTTCTCAAATTACTTGC+AGG 0.342371 1_1:+60527601 Msa0033180:CDS
GGTGGACGTGTTGCAGCCTT+TGG 0.346278 1_1:+60526582 Msa0033180:CDS
AATGCCTATATGGATTCATT+TGG 0.360705 1_1:+60523105 Msa0033180:CDS
CGGGTTCTCGAATTACTTGC+AGG 0.362976 1_1:+60523255 Msa0033180:CDS
TCAAATTCCAATAGAATTGT+TGG 0.363868 1_1:-60523515 None:intergenic
TCAAATTCCAATAGAATTGT+TGG 0.363868 1_1:-60527864 None:intergenic
CTGATCCGTGCTCCAGTTGC+CGG 0.368213 1_1:-60523183 None:intergenic
CAGCAAAGTTGCATCCTTGA+TGG 0.373898 1_1:-60523140 None:intergenic
GGATGCAACTTTGCTGCATC+AGG 0.382000 1_1:+60523147 Msa0033180:CDS
CAAGCCAAATGAATCCAAAT+AGG 0.382138 1_1:-60527455 None:intergenic
GGATGCAACTTTGCAGCATC+AGG 0.384483 1_1:+60527493 Msa0033180:CDS
TCATCTATCCTACCGGCAAC+TGG 0.386820 1_1:+60523171 Msa0033180:CDS
TTGCATCCTTGATGGAAATT+CGG 0.393214 1_1:-60523132 None:intergenic
CAATAGAATTGTTGGAATTG+AGG 0.399195 1_1:-60523507 None:intergenic
CAATAGAATTGTTGGAATTG+AGG 0.399195 1_1:-60527856 None:intergenic
CCTGAACCCCAAAGCTGAAC+GGG 0.401904 1_1:-60523206 None:intergenic
AATCACTTCAAAACTCCGTC+TGG 0.402363 1_1:+60517148 Msa0033180:CDS
TTGGAATTGAGGCAATTATC+TGG 0.405354 1_1:-60527845 None:intergenic
GATTAAAGGCTTTAGAAGCT+TGG 0.411933 1_1:-60523810 None:intergenic
AATCACTTCAAAACTCCGTC+TGG 0.419405 1_1:+60526633 Msa0033180:CDS
TATCCAACAGCTTTCAACTT+TGG 0.422730 1_1:+60526540 Msa0033180:CDS
TAACATTTACATCTGGATAC+TGG 0.424521 1_1:-60528217 None:intergenic
GCCAAATTGGGCAATAAAAT+GGG 0.425471 1_1:-60523740 None:intergenic
TTCTCGAAATAATCTTTGGC+CGG 0.428325 1_1:-60527756 None:intergenic
AGTTTCTGCTATTCAAAGCT+CGG 0.430912 1_1:+60523235 Msa0033180:CDS
TTCTCGAAATAATCTTCGGC+TGG 0.441960 1_1:-60523407 None:intergenic
TAAACCAAATGAATCCATAT+AGG 0.444930 1_1:-60523109 None:intergenic
CCATCAAAGCTTGATGAACT+AGG 0.448934 1_1:+60528119 Msa0033180:intron
TGATGGGTCAGTGCCAAATT+GGG 0.450747 1_1:-60523752 None:intergenic
AGGGTTTGAACAGCCAATTA+TGG 0.454257 1_1:+60528380 Msa0033180:intron
CACGAGTCCACTCGGATGCT+TGG 0.455970 1_1:+60523717 Msa0033180:CDS
CCCCTTCTCGAAATAATCTT+CGG 0.461095 1_1:-60523411 None:intergenic
CCATCAAAGCTTGATGAACT+AGG 0.461267 1_1:+60523769 Msa0033180:CDS
AATTTCTGCTATTCAAAGCT+CGG 0.462880 1_1:+60527581 Msa0033180:CDS
GGTGGACGTGTTGCAGCGTT+CGG 0.468021 1_1:+60517097 Msa0033180:CDS
TGATGCAACATATCGATTTG+TGG 0.468762 1_1:-60528553 None:intergenic
TCCAAATAGGCATTTAAGAA+TGG 0.469994 1_1:-60527442 None:intergenic
CTGATCCGCGCTGCAGTTGG+TGG 0.476555 1_1:-60527529 None:intergenic
GGCTTGCCAAATTTCCATCA+TGG 0.482832 1_1:+60527472 Msa0033180:CDS
TCACCAAAGTTGAAAGCTGT+TGG 0.485787 1_1:-60526543 None:intergenic
TCACCAAAGTTGAAAACTGC+CGG 0.489541 1_1:-60517058 None:intergenic
ACATATGTAACATTTACATC+TGG 0.494010 1_1:-60528224 None:intergenic
GACAGAGACTGTACGACAGC+GGG 0.494239 1_1:+60523671 Msa0033180:intron
TCCATATAGGCATTTAAGAA+TGG 0.497376 1_1:-60523096 None:intergenic
TATGATAGTCGCGTTTCTTG+TGG 0.500613 1_1:+60528435 Msa0033180:CDS
GGGACGGTAGTTACAGCAAA+AGG 0.509148 1_1:+60528477 Msa0033180:CDS
GAGAAACAAAGGTCTTAAAT+GGG 0.510564 1_1:+60528457 Msa0033180:CDS
GCCAAAGATTATTTCGAGAA+GGG 0.510569 1_1:+60527759 Msa0033180:CDS
AGTGATTCTGTCCGTAAGGT+GGG 0.513878 1_1:-60526617 None:intergenic
GCCGAAGATTATTTCGAGAA+GGG 0.516830 1_1:+60523410 Msa0033180:CDS
AAGTGATTCTGTCCGTAAGG+TGG 0.517379 1_1:-60526618 None:intergenic
ATAGTAGTGTGTATGTAAGC+TGG 0.522866 1_1:+60528508 Msa0033180:CDS
ATTTCTGCTATTCAAAGCTC+GGG 0.524143 1_1:+60527582 Msa0033180:CDS
GTTTCTGCTATTCAAAGCTC+GGG 0.527004 1_1:+60523236 Msa0033180:CDS
TGATTCTGTCCGTAAGGTGG+GGG 0.527664 1_1:-60526615 None:intergenic
GGTGATTCAACCTCGGACAC+AGG 0.528880 1_1:+60526561 Msa0033180:CDS
GGACTGATCCGCGCTGCAGT+TGG 0.529298 1_1:-60527532 None:intergenic
CAACTTTGGTGATTCAACCT+CGG 0.535190 1_1:+60526554 Msa0033180:CDS
TTGAAGTGATTCTGTCCGTA+AGG 0.541346 1_1:-60526621 None:intergenic
GGTTTACCGAATTTCCATCA+AGG 0.541746 1_1:+60523126 Msa0033180:CDS
TCTCGAAATAATCTTTGGCC+GGG 0.541874 1_1:-60527755 None:intergenic
GATCAGCCCGTTCAGCTTTG+GGG 0.542506 1_1:+60523200 Msa0033180:CDS
GTTGCATCACAAATTCTCAC+TGG 0.551931 1_1:+60528567 Msa0033180:CDS
ATCAGGTTCATCTATCCTAC+CGG 0.555203 1_1:+60523164 Msa0033180:CDS
CCGAAGATTATTTCGAGAAG+GGG 0.556487 1_1:+60523411 Msa0033180:CDS
CCAAAGATTATTTCGAGAAG+GGG 0.556487 1_1:+60527760 Msa0033180:CDS
GATTTCTGTAGTAAATTGCA+TGG 0.558887 1_1:+60528194 Msa0033180:CDS
ATCACTTCAAAACTCCGTCT+GGG 0.559178 1_1:+60517149 Msa0033180:CDS
TAGTAGTGTGTATGTAAGCT+GGG 0.559819 1_1:+60528509 Msa0033180:CDS
GGCCAAAGATTATTTCGAGA+AGG 0.560573 1_1:+60527758 Msa0033180:CDS
CACCAAAGTTGAAAACTGCC+GGG 0.561599 1_1:-60517057 None:intergenic
CTAGTTCATCAAGCTTTGAT+GGG 0.563318 1_1:-60523768 None:intergenic
ACCTGAACCCCAAAGCTGAA+CGG 0.568901 1_1:-60523207 None:intergenic
CTGCAAAGTTGCATCCATGA+TGG 0.569223 1_1:-60527486 None:intergenic
ATCACTTCAAAACTCCGTCT+GGG 0.569649 1_1:+60526634 Msa0033180:CDS
AAGTCAACAGAATTTGCTAC+AGG 0.576138 1_1:-60526513 None:intergenic
AGCCGAAGATTATTTCGAGA+AGG 0.576592 1_1:+60523409 Msa0033180:CDS
GGTGATTCAAACTCAGACAC+AGG 0.577697 1_1:+60517076 Msa0033180:CDS
CAGCCAATTATGGCTTGTTG+TGG 0.590126 1_1:+60528390 Msa0033180:CDS
AACAAAGGTCTTAAATGGGA+CGG 0.594075 1_1:+60528461 Msa0033180:CDS
GTCTTGTGAATAAAATGCGA+TGG 0.598017 1_1:-60523468 None:intergenic
TCCTACCGGCAACTGGAGCA+CGG 0.599696 1_1:+60523178 Msa0033180:CDS
CGTTTCTTGTGGAGAAACAA+AGG 0.600897 1_1:+60528446 Msa0033180:CDS
ACCTGAACCCCAAAGCTGAA+CGG 0.605895 1_1:-60527553 None:intergenic
ATACATAACACGAGTCCACT+CGG 0.609452 1_1:+60523709 Msa0033180:CDS
TCTCGAAATAATCTTCGGCT+GGG 0.611374 1_1:-60523406 None:intergenic
TGTTGTTGACTTCAGTTACC+CGG 0.611957 1_1:+60517039 Msa0033180:CDS
AACACGTCCACCTGTGTCCG+AGG 0.613374 1_1:-60526571 None:intergenic
GTGATTCTGTCCGTAAGGTG+GGG 0.616426 1_1:-60526616 None:intergenic
CCGTCTGGGAGATTCTGCGA+TGG 0.618539 1_1:+60517163 Msa0033180:CDS
AGTGTGTATGTAAGCTGGGA+TGG 0.622186 1_1:+60528513 Msa0033180:CDS
TATTGATGCAGTGAATGCAA+CGG 0.633601 1_1:+60523068 Msa0033180:intron
GATCAGTCCGTTCAGCTTTG+GGG 0.635766 1_1:+60527546 Msa0033180:CDS
GATTCAACCTCGGACACAGG+TGG 0.645296 1_1:+60526564 Msa0033180:CDS
GATTCTGTCCGTAAGGTGGG+GGG 0.652057 1_1:-60526614 None:intergenic
ATGGCTTGTTGTGGATATGG+AGG 0.663046 1_1:+60528399 Msa0033180:CDS
CCATCACAAAATCTCCCAGA+CGG 0.670582 1_1:-60526648 None:intergenic
TCCGTGCTCCAGTTGCCGGT+AGG 0.676342 1_1:-60523179 None:intergenic
CAGCTAAGTTGTGTTCACGA+AGG 0.677389 1_1:-60528145 None:intergenic
AAATGGGCCAAGCATCCGAG+TGG 0.678410 1_1:-60523724 None:intergenic
GTTGTGAGTAATTTGCAATG+AGG 0.678761 1_1:-60528271 None:intergenic
GATTCAAACTCAGACACAGG+TGG 0.683701 1_1:+60517079 Msa0033180:CDS
ATTGCAAATTACTCACAACA+TGG 0.693312 1_1:+60528275 Msa0033180:CDS
ACGCGACTATCATAGTTCAA+CGG 0.697951 1_1:-60528426 None:intergenic
TGACAGAGACTGTACGACAG+CGG 0.698820 1_1:+60523670 Msa0033180:intron
CCATCGCAGAATCTCCCAGA+CGG 0.699155 1_1:-60517163 None:intergenic
ACAGAGACTGTACGACAGCG+GGG 0.711480 1_1:+60523672 Msa0033180:intron
TTCTTCCACCAACTGCAGCG+CGG 0.720187 1_1:+60527524 Msa0033180:CDS
CGACTATCATAGTTCAACGG+CGG 0.756925 1_1:-60528423 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATAAATAAAAATAAT+AGG + chr1_1:60525211-60525230 Msa0033180:intron 0.0%
!! AAATAATGATTTGAAAAATA+GGG - chr1_1:60517737-60517756 None:intergenic 10.0%
!! AAATAATGATTTGAAAAATA+GGG - chr1_1:60517737-60517756 None:intergenic 10.0%
!!! CTAATTAAGTTTATTTTTAA+AGG - chr1_1:60519833-60519852 None:intergenic 10.0%
!!! TATGCAAATATTTAAATTTT+TGG - chr1_1:60521712-60521731 None:intergenic 10.0%
!!! ATAAATTTTGTAGATTTAAA+AGG + chr1_1:60524794-60524813 Msa0033180:intron 10.0%
!!! TAAATTTTGTAGATTTAAAA+GGG + chr1_1:60524795-60524814 Msa0033180:intron 10.0%
!!! TTTTTTTTATCTATTTGTAT+CGG - chr1_1:60525438-60525457 None:intergenic 10.0%
!! ATACAAATAGATAAAAAAAA+TGG + chr1_1:60525438-60525457 Msa0033180:intron 10.0%
!! GAAATAATGATTTGAAAAAT+AGG - chr1_1:60517738-60517757 None:intergenic 15.0%
!! GAAATAATGATTTGAAAAAT+AGG - chr1_1:60517738-60517757 None:intergenic 15.0%
!!! ATTTGAATTTTGAATTGAAA+AGG - chr1_1:60518118-60518137 None:intergenic 15.0%
!! AGTAAAACTAAAAAATAAGA+TGG - chr1_1:60518584-60518603 None:intergenic 15.0%
!! TTGAATGAGTTATTTAAATT+AGG + chr1_1:60518651-60518670 Msa0033180:intron 15.0%
!! AGTTATTTAAATTAGGATTT+AGG + chr1_1:60518658-60518677 Msa0033180:intron 15.0%
!! GTTATTTAAATTAGGATTTA+GGG + chr1_1:60518659-60518678 Msa0033180:intron 15.0%
!! TCATTAATATATCAATTTGT+TGG + chr1_1:60518921-60518940 Msa0033180:intron 15.0%
!! AAAATGTTTCAATAAGAAAA+TGG + chr1_1:60519186-60519205 Msa0033180:intron 15.0%
!! AACATTCAATTTAAATCAAA+TGG - chr1_1:60519437-60519456 None:intergenic 15.0%
!!! TTTATTACTTTGATAGTTTA+AGG + chr1_1:60519971-60519990 Msa0033180:intron 15.0%
!!! TTAACAATTTTTTATGGATT+AGG - chr1_1:60521218-60521237 None:intergenic 15.0%
!!! CTTTAGTTAACAATTTTTTA+TGG - chr1_1:60521224-60521243 None:intergenic 15.0%
!! AATTAAACTTTGATAGATAT+AGG - chr1_1:60521300-60521319 None:intergenic 15.0%
!!! TGTAAATTGTTAATTTTTCT+AGG - chr1_1:60521452-60521471 None:intergenic 15.0%
!!! AAATTAAAACCTTTGAAATA+AGG - chr1_1:60521613-60521632 None:intergenic 15.0%
!!! TTTGAATATTTTGCTATAAA+AGG + chr1_1:60521800-60521819 Msa0033180:intron 15.0%
!!! TTGAATATTTTGCTATAAAA+GGG + chr1_1:60521801-60521820 Msa0033180:intron 15.0%
!!! TCAATTTTTTTAGAGTATTA+TGG + chr1_1:60522155-60522174 Msa0033180:intron 15.0%
!!! AATTTATTTAGACTTTTCTT+TGG + chr1_1:60522210-60522229 Msa0033180:intron 15.0%
!! TCTCAATATATTCAAAAATT+TGG + chr1_1:60522605-60522624 Msa0033180:intron 15.0%
!!! CTTATTTATGATCTATTTTA+TGG + chr1_1:60522722-60522741 Msa0033180:intron 15.0%
!! TTAACAAAATAGTAATGAAT+TGG + chr1_1:60523566-60523585 Msa0033180:intron 15.0%
!!! ATTTAATCTCATTTTTACTT+AGG + chr1_1:60525020-60525039 Msa0033180:intron 15.0%
!!! ATTTTGCTTATAATAATGAT+CGG + chr1_1:60525909-60525928 Msa0033180:intron 15.0%
!! ATCTAAATTTATATAGCTAT+TGG + chr1_1:60526024-60526043 Msa0033180:intron 15.0%
!! AAAAAATTAGATAGTTAAGT+AGG - chr1_1:60526129-60526148 None:intergenic 15.0%
!!! TGTTTACTATTAATTTTGTA+CGG - chr1_1:60526202-60526221 None:intergenic 15.0%
!! ACATTAAAGAAATAAAAGAA+AGG - chr1_1:60526333-60526352 None:intergenic 15.0%
!! ATATATATATAACTGGTATT+TGG + chr1_1:60527332-60527351 Msa0033180:intron 15.0%
!!! ACTCAAATAACTTTTAACTA+CGG + chr1_1:60517309-60517328 Msa0033180:intron 20.0%
!! GATGATCATTTAATTAAGAT+CGG + chr1_1:60517371-60517390 Msa0033180:intron 20.0%
!! TATTGTGTAAATGCTTAAAA+TGG - chr1_1:60517657-60517676 None:intergenic 20.0%
!! TATTGTGTAAATGCTTAAAA+TGG - chr1_1:60517657-60517676 None:intergenic 20.0%
!!! ATGTTATTTTAGTGTTGAAT+AGG - chr1_1:60518183-60518202 None:intergenic 20.0%
!! TGAGAAATATGTTTGAAAAT+CGG - chr1_1:60518309-60518328 None:intergenic 20.0%
!! TTCACAATTTGATAAATTTG+TGG + chr1_1:60518435-60518454 Msa0033180:intron 20.0%
!! TCACAATTTGATAAATTTGT+GGG + chr1_1:60518436-60518455 Msa0033180:intron 20.0%
!! ATCAAAACTCATAAAATCTA+AGG - chr1_1:60518757-60518776 None:intergenic 20.0%
!!! ATTGAGATTTGTTAAACATT+TGG - chr1_1:60519047-60519066 None:intergenic 20.0%
!! AAATGTTTAACAAATCTCAA+TGG + chr1_1:60519046-60519065 Msa0033180:intron 20.0%
!! AATGTTTAACAAATCTCAAT+GGG + chr1_1:60519047-60519066 Msa0033180:intron 20.0%
!!! ATATAACATTTTCTACTCTT+TGG + chr1_1:60519132-60519151 Msa0033180:intron 20.0%
!!! TATAACATTTTCTACTCTTT+GGG + chr1_1:60519133-60519152 Msa0033180:intron 20.0%
!!! ATGATATTGTTAGTTTTACA+TGG + chr1_1:60519209-60519228 Msa0033180:intron 20.0%
!! TAAAACACAAACAAAATCAT+CGG - chr1_1:60519237-60519256 None:intergenic 20.0%
!!! AAAATTAGAAATGGTTCTAT+TGG + chr1_1:60519284-60519303 Msa0033180:intron 20.0%
!!! GCTATTTATCTATTTTTATG+TGG + chr1_1:60519365-60519384 Msa0033180:intron 20.0%
!! CAAAACAATGAAAAATCAAA+TGG - chr1_1:60519541-60519560 None:intergenic 20.0%
!!! TTCTGAAACAATATATTCAT+AGG + chr1_1:60519564-60519583 Msa0033180:intron 20.0%
!! CAATCAAAAAAGCAAAATAT+AGG - chr1_1:60519653-60519672 None:intergenic 20.0%
!!! CTATATTTTGCTTTTTTGAT+TGG + chr1_1:60519651-60519670 Msa0033180:intron 20.0%
!! AATGAGATAATTGAAAATAG+TGG + chr1_1:60519690-60519709 Msa0033180:intron 20.0%
!!! TTTGAAATTGAAACAATCTT+TGG - chr1_1:60519900-60519919 None:intergenic 20.0%
!! TTATACAATAGAGTATGATA+TGG + chr1_1:60520266-60520285 Msa0033180:intron 20.0%
!! AACATATATAAGAACATGTA+TGG + chr1_1:60520333-60520352 Msa0033180:intron 20.0%
!!! TTTGATTTATCATTTTGTTG+AGG - chr1_1:60520385-60520404 None:intergenic 20.0%
!!! TAATATTGTCTCTTTTGAAA+CGG + chr1_1:60520568-60520587 Msa0033180:intron 20.0%
!! AAACTGTGTAATGAAAATAA+AGG + chr1_1:60521095-60521114 Msa0033180:intron 20.0%
!! AAGAAGTAATAATGAATATG+AGG + chr1_1:60521141-60521160 Msa0033180:intron 20.0%
!! AGAAGTAATAATGAATATGA+GGG + chr1_1:60521142-60521161 Msa0033180:intron 20.0%
!! AAAATGACTTATCAAATTCT+TGG + chr1_1:60521333-60521352 Msa0033180:intron 20.0%
!! AAATGACTTATCAAATTCTT+GGG + chr1_1:60521334-60521353 Msa0033180:intron 20.0%
!! ATAACCAAATTCATATTTGA+TGG - chr1_1:60521521-60521540 None:intergenic 20.0%
!!! AAGGTTTTAATTTGAATGTT+TGG + chr1_1:60521620-60521639 Msa0033180:intron 20.0%
!!! CTAAATATGACTATTTCTTT+TGG + chr1_1:60521754-60521773 Msa0033180:intron 20.0%
!! TATTATGTTTGGAAATAACA+CGG - chr1_1:60522776-60522795 None:intergenic 20.0%
!! TGTTTGAAAATAAGAAAGAA+GGG + chr1_1:60523003-60523022 Msa0033180:intron 20.0%
!! TAATTCCAAAATATGTTTGT+TGG - chr1_1:60524446-60524465 None:intergenic 20.0%
!! CAATATATAAGATTGTGTTT+GGG - chr1_1:60524612-60524631 None:intergenic 20.0%
!! ACAATATATAAGATTGTGTT+TGG - chr1_1:60524613-60524632 None:intergenic 20.0%
!!! ATTTTTACAAGTTAAGAACT+TGG + chr1_1:60524771-60524790 Msa0033180:intron 20.0%
!! ATACAGAAATTTCAATAAGT+GGG + chr1_1:60525251-60525270 Msa0033180:intron 20.0%
!! GATATAATTCTTCGATATTA+AGG - chr1_1:60525416-60525435 None:intergenic 20.0%
!! ACAAGTTAGTTGAATTAATT+AGG + chr1_1:60525674-60525693 Msa0033180:intron 20.0%
!! CAAGTTAGTTGAATTAATTA+GGG + chr1_1:60525675-60525694 Msa0033180:intron 20.0%
!! AAGTTAGTTGAATTAATTAG+GGG + chr1_1:60525676-60525695 Msa0033180:intron 20.0%
!! ACATCTAGTAATTTGAAAAA+CGG + chr1_1:60525724-60525743 Msa0033180:intron 20.0%
!!! TAAGCAAAAATTCACTTTTT+AGG + chr1_1:60525810-60525829 Msa0033180:intron 20.0%
!! ATTAATAGTAAACAAATACG+AGG + chr1_1:60526208-60526227 Msa0033180:intron 20.0%
!! AACTACGAAAATTTCATAAA+AGG - chr1_1:60526710-60526729 None:intergenic 20.0%
!!! TATTTTCTCATCAACTTTAA+AGG + chr1_1:60526906-60526925 Msa0033180:intron 20.0%
!!! AGATTTTAAGAACAGAATTT+CGG - chr1_1:60527145-60527164 None:intergenic 20.0%
!!! TATACATTTTTGAAATAGGT+CGG + chr1_1:60527784-60527803 Msa0033180:CDS 20.0%
!!! CAATTCATTACTAATTTGTT+AGG - chr1_1:60527916-60527935 None:intergenic 20.0%
!! CTAACAAATTAGTAATGAAT+TGG + chr1_1:60527914-60527933 Msa0033180:intron 20.0%
! ATCATTTAATTAAGATCGGA+CGG + chr1_1:60517375-60517394 Msa0033180:intron 25.0%
!! TTTGAATTTTGAATTGGAGA+GGG - chr1_1:60517711-60517730 None:intergenic 25.0%
!! ATTTGAATTTTGAATTGGAG+AGG - chr1_1:60517712-60517731 None:intergenic 25.0%
!! GGGAAATTTGAATTTTGAAT+TGG - chr1_1:60517717-60517736 None:intergenic 25.0%
!! TTTGAATTTTGAATTGGAGA+GGG - chr1_1:60517711-60517730 None:intergenic 25.0%
!! ATTTGAATTTTGAATTGGAG+AGG - chr1_1:60517712-60517731 None:intergenic 25.0%
!! GGGAAATTTGAATTTTGAAT+TGG - chr1_1:60517717-60517736 None:intergenic 25.0%
!! ATTTAGGGTTAAACTGTATT+AGG + chr1_1:60518674-60518693 Msa0033180:intron 25.0%
!! TTTAGGGTTAAACTGTATTA+GGG + chr1_1:60518675-60518694 Msa0033180:intron 25.0%
! AAGAATGAATGGATCAAAAT+AGG - chr1_1:60518732-60518751 None:intergenic 25.0%
!!! TATTTTGATCCATTCATTCT+TGG + chr1_1:60518731-60518750 Msa0033180:intron 25.0%
! ATGTTTAACAAATCTCAATG+GGG + chr1_1:60519048-60519067 Msa0033180:intron 25.0%
! AAAACACAAACAAAATCATC+GGG - chr1_1:60519236-60519255 None:intergenic 25.0%
!!! TGTTTGTGTTTTATTTGTTG+AGG + chr1_1:60519244-60519263 Msa0033180:intron 25.0%
! AAATGATAAATCAAAGAGAC+CGG + chr1_1:60520390-60520409 Msa0033180:intron 25.0%
! AGTAAAGTCGAATCAAATTA+AGG - chr1_1:60520481-60520500 None:intergenic 25.0%
!! TCTTTGATAATCTTTGTGTT+TGG + chr1_1:60520696-60520715 Msa0033180:intron 25.0%
!!! TTTGGATTTTTTGCGATAAA+AGG + chr1_1:60520714-60520733 Msa0033180:intron 25.0%
! AACATGATGACCTTATAATA+TGG - chr1_1:60520898-60520917 None:intergenic 25.0%
! TAAGTAATCTGCAAAAACAA+AGG - chr1_1:60520951-60520970 None:intergenic 25.0%
! AACTTAGAATCTACTACTTT+AGG - chr1_1:60521045-60521064 None:intergenic 25.0%
! AGCAAAACATATTATGGATT+AGG - chr1_1:60521189-60521208 None:intergenic 25.0%
! AAGACCATCAAATATGAATT+TGG + chr1_1:60521514-60521533 Msa0033180:intron 25.0%
! ATAGTAATGTCTCTTTAAGT+TGG - chr1_1:60521925-60521944 None:intergenic 25.0%
! TTCAATTCATATAGCAAGAT+AGG + chr1_1:60521950-60521969 Msa0033180:intron 25.0%
! AAAATTCACTGTTGAAATAC+TGG + chr1_1:60522357-60522376 Msa0033180:intron 25.0%
!!! CTATTTCATAGTTTGTTGTT+TGG + chr1_1:60522386-60522405 Msa0033180:intron 25.0%
! ACTCATCAATTTGAATAGAT+GGG - chr1_1:60522426-60522445 None:intergenic 25.0%
! AACTCATCAATTTGAATAGA+TGG - chr1_1:60522427-60522446 None:intergenic 25.0%
!! ACATAGTATTTTGTCAAAAC+TGG - chr1_1:60522467-60522486 None:intergenic 25.0%
!!! GTTTTGACAAAATACTATGT+AGG + chr1_1:60522467-60522486 Msa0033180:intron 25.0%
! ACAAAATACTATGTAGGAAT+TGG + chr1_1:60522473-60522492 Msa0033180:intron 25.0%
! GGATATGTTACTATTGAAAA+CGG + chr1_1:60522504-60522523 Msa0033180:intron 25.0%
!! AAGTAACATTAGTCTAACAT+TGG - chr1_1:60522672-60522691 None:intergenic 25.0%
! AATGTTAGACTAATGTTACT+TGG + chr1_1:60522671-60522690 Msa0033180:intron 25.0%
! GTGTATTATATTCTTTCACT+AGG + chr1_1:60522749-60522768 Msa0033180:intron 25.0%
! AGTAATTAAGCATACATAAC+TGG + chr1_1:60522980-60522999 Msa0033180:intron 25.0%
! GTGTTTGAAAATAAGAAAGA+AGG + chr1_1:60523002-60523021 Msa0033180:intron 25.0%
! TAAACCAAATGAATCCATAT+AGG - chr1_1:60523112-60523131 None:intergenic 25.0%
!! AATGTCAAAACCAAGTATTT+TGG + chr1_1:60523313-60523332 Msa0033180:intron 25.0%
! AATTAGAGAACCAAAATACT+TGG - chr1_1:60523326-60523345 None:intergenic 25.0%
! TCTCTAATTCATTCATTGAA+AGG + chr1_1:60523337-60523356 Msa0033180:intron 25.0%
! TCAAATTCCAATAGAATTGT+TGG - chr1_1:60523518-60523537 None:intergenic 25.0%
!! ATTCTATTGGAATTTGAAAC+TGG + chr1_1:60523521-60523540 Msa0033180:CDS 25.0%
!!! CTTGAGTTCAAGAATTTTTT+AGG - chr1_1:60523603-60523622 None:intergenic 25.0%
! TTGCAAAAGAAACATGTTTA+TGG - chr1_1:60524361-60524380 None:intergenic 25.0%
!! ATAGTCCAACAAACATATTT+TGG + chr1_1:60524438-60524457 Msa0033180:intron 25.0%
!!! CAAATAAGATCAGAGTTTTT+TGG - chr1_1:60524479-60524498 None:intergenic 25.0%
! TCTCAAACTCAATTATAACT+TGG + chr1_1:60524506-60524525 Msa0033180:intron 25.0%
! CTCAAACTCAATTATAACTT+GGG + chr1_1:60524507-60524526 Msa0033180:intron 25.0%
! TATTAACAACTCATTAGAGT+GGG + chr1_1:60525124-60525143 Msa0033180:intron 25.0%
! GATACAGAAATTTCAATAAG+TGG + chr1_1:60525250-60525269 Msa0033180:intron 25.0%
! TACAGAAATTTCAATAAGTG+GGG + chr1_1:60525252-60525271 Msa0033180:intron 25.0%
!! TGCAACTAAATCAATTTTGA+AGG - chr1_1:60525480-60525499 None:intergenic 25.0%
!! TCAAAATTGATTTAGTTGCA+AGG + chr1_1:60525480-60525499 Msa0033180:intron 25.0%
!!! GTTTTGTTAACTAGTGTTTT+TGG - chr1_1:60525576-60525595 None:intergenic 25.0%
!! AATTAATTAGGGGTATGTTT+AGG + chr1_1:60525686-60525705 Msa0033180:intron 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG - chr1_1:60525800-60525819 None:intergenic 25.0%
! CATTTAGTAAATTATGCATG+TGG - chr1_1:60525874-60525893 None:intergenic 25.0%
! AGGCAATATGAAATTGTATA+TGG + chr1_1:60525994-60526013 Msa0033180:intron 25.0%
! GGCAATATGAAATTGTATAT+GGG + chr1_1:60525995-60526014 Msa0033180:intron 25.0%
! GCAATATGAAATTGTATATG+GGG + chr1_1:60525996-60526015 Msa0033180:intron 25.0%
! TTACAAAAATAATGCACAAG+TGG + chr1_1:60526047-60526066 Msa0033180:intron 25.0%
! TACAAAAATAATGCACAAGT+GGG + chr1_1:60526048-60526067 Msa0033180:intron 25.0%
! AAATTAGATAGTTAAGTAGG+CGG - chr1_1:60526126-60526145 None:intergenic 25.0%
! CTCGTATTTGTTTACTATTA+AGG - chr1_1:60526210-60526229 None:intergenic 25.0%
! CTTAATAGTAAACAAATACG+AGG + chr1_1:60526237-60526256 Msa0033180:intron 25.0%
!!! ATCTTGCATTTTATTTGCTA+AGG - chr1_1:60526268-60526287 None:intergenic 25.0%
!!! TTAGTTTTGTCGTTTAAGAA+AGG - chr1_1:60526310-60526329 None:intergenic 25.0%
! ATTTGTATTACACTACTGTT+TGG + chr1_1:60526402-60526421 Msa0033180:intron 25.0%
! GAAACATCTTATGTTACATA+CGG + chr1_1:60527005-60527024 Msa0033180:intron 25.0%
! GAAATTCTGTTCTTAAAATC+TGG + chr1_1:60527144-60527163 Msa0033180:intron 25.0%
! GAATTAGAGAAAAACAAAGT+TGG - chr1_1:60527675-60527694 None:intergenic 25.0%
!! TTTTCTCTAATTCATTCATG+TGG + chr1_1:60527682-60527701 Msa0033180:intron 25.0%
!!! GGGTTATACATTTTTGAAAT+AGG + chr1_1:60527780-60527799 Msa0033180:CDS 25.0%
! TCAAATTCCAATAGAATTGT+TGG - chr1_1:60523518-60523537 None:intergenic 25.0%
!! ATTCTATTGGAATTTGAAAC+TGG + chr1_1:60523521-60523540 Msa0033180:CDS 25.0%
!! CTTGAGTTCAAGAATATTTT+AGG - chr1_1:60527952-60527971 None:intergenic 25.0%
! ACATATGTAACATTTACATC+TGG - chr1_1:60523877-60523896 None:intergenic 25.0%
! TTGAGTGAGTTGAAAAAAGT+TGG - chr1_1:60517295-60517314 None:intergenic 30.0%
TTTAACTACGGAAAAAGTTG+CGG + chr1_1:60517321-60517340 Msa0033180:intron 30.0%
ATTCACATAGTTAGAGATGT+CGG - chr1_1:60517475-60517494 None:intergenic 30.0%
AGAGGGAAAATGTATGATAA+TGG - chr1_1:60517694-60517713 None:intergenic 30.0%
AGAGGGAAAATGTATGATAA+TGG - chr1_1:60517694-60517713 None:intergenic 30.0%
AAAAAGTAGGAGGGAAAAAA+GGG - chr1_1:60518150-60518169 None:intergenic 30.0%
ATAAGAGAGAAAAAGTAGGA+GGG - chr1_1:60518159-60518178 None:intergenic 30.0%
AATAAGAGAGAAAAAGTAGG+AGG - chr1_1:60518160-60518179 None:intergenic 30.0%
AGGAATAAGAGAGAAAAAGT+AGG - chr1_1:60518163-60518182 None:intergenic 30.0%
AAATCGGTAGCTAATTTACT+TGG - chr1_1:60518293-60518312 None:intergenic 30.0%
! CTTTTCGAAAATCAGCTTAT+GGG + chr1_1:60518411-60518430 Msa0033180:intron 30.0%
! GTGAAAAAGGGATAATTTGT+GGG + chr1_1:60518473-60518492 Msa0033180:intron 30.0%
TACTTACAATTACAAACGAC+TGG - chr1_1:60518858-60518877 None:intergenic 30.0%
CATTTGGAAATTAGATAGCA+TGG - chr1_1:60519031-60519050 None:intergenic 30.0%
!!! TTGTGTTTTATTTGTTGAGG+TGG + chr1_1:60519247-60519266 Msa0033180:intron 30.0%
! TATTTGTTGAGGTGGTTAAA+AGG + chr1_1:60519255-60519274 Msa0033180:intron 30.0%
AGGTGGATCAAAATTAGAAA+TGG + chr1_1:60519275-60519294 Msa0033180:intron 30.0%
AAATGGCTTCTTATAAGAGA+AGG - chr1_1:60519420-60519439 None:intergenic 30.0%
TTGATGAAAAAGAGAATGAC+TGG + chr1_1:60519492-60519511 Msa0033180:intron 30.0%
TCATAGGTGAACAATTTCAT+TGG + chr1_1:60519580-60519599 Msa0033180:intron 30.0%
! TTTTACTTTATATCCTCCTG+TGG + chr1_1:60519604-60519623 Msa0033180:intron 30.0%
TCTCATGAAATTTAGTGGAA+AGG - chr1_1:60520160-60520179 None:intergenic 30.0%
CAATGTCTCATGAAATTTAG+TGG - chr1_1:60520165-60520184 None:intergenic 30.0%
! TGAGTAATATCTGGTTTACA+AGG + chr1_1:60520201-60520220 Msa0033180:intron 30.0%
! TAATATCTGGTTTACAAGGT+TGG + chr1_1:60520205-60520224 Msa0033180:intron 30.0%
! TCCAAACATCATTTTATGAC+CGG - chr1_1:60520412-60520431 None:intergenic 30.0%
AAAGTCGAATCAAATTAAGG+TGG - chr1_1:60520478-60520497 None:intergenic 30.0%
! TATGACACTTCTCTTTCTTT+TGG + chr1_1:60520668-60520687 Msa0033180:intron 30.0%
! CACATGTTTTCATAAAGAGA+AGG - chr1_1:60520870-60520889 None:intergenic 30.0%
CTTCTCTTTATGAAAACATG+TGG + chr1_1:60520868-60520887 Msa0033180:intron 30.0%
ATGTGGTGAACCATATTATA+AGG + chr1_1:60520885-60520904 Msa0033180:intron 30.0%
! GGATTATATGTTTTGCTTCA+AGG + chr1_1:60521163-60521182 Msa0033180:intron 30.0%
CCTTGAAGCAAAACATATTA+TGG - chr1_1:60521195-60521214 None:intergenic 30.0%
! CCATAATATGTTTTGCTTCA+AGG + chr1_1:60521192-60521211 Msa0033180:intron 30.0%
GACATGACATTGATAGATAT+AGG - chr1_1:60521269-60521288 None:intergenic 30.0%
CATACTCATCAGTTTCAAAT+AGG - chr1_1:60521393-60521412 None:intergenic 30.0%
TACATGTAAGGTCAAAAGAT+GGG - chr1_1:60521477-60521496 None:intergenic 30.0%
ATACATGTAAGGTCAAAAGA+TGG - chr1_1:60521478-60521497 None:intergenic 30.0%
!! AACCTTTGAAATAAGGACAT+GGG - chr1_1:60521606-60521625 None:intergenic 30.0%
!! AAACCTTTGAAATAAGGACA+TGG - chr1_1:60521607-60521626 None:intergenic 30.0%
AAATCGCAATCTCAAGAAAA+TGG - chr1_1:60521687-60521706 None:intergenic 30.0%
AATCTGCATCTTAGTCAAAA+TGG - chr1_1:60522078-60522097 None:intergenic 30.0%
ACTCTTCAAATCTGTTAGAT+TGG + chr1_1:60522110-60522129 Msa0033180:intron 30.0%
GGAACTATTAACATTCAACT+AGG + chr1_1:60522176-60522195 Msa0033180:intron 30.0%
GATCTCTTAAGATTCAACTA+AGG + chr1_1:60522282-60522301 Msa0033180:intron 30.0%
AATAACCCAAGATTGTAGTT+TGG + chr1_1:60522317-60522336 Msa0033180:intron 30.0%
ATAGTCCAAACTACAATCTT+GGG - chr1_1:60522325-60522344 None:intergenic 30.0%
AATAGTCCAAACTACAATCT+TGG - chr1_1:60522326-60522345 None:intergenic 30.0%
!! TTTGTTGTTTGGTTCTTTGT+TGG + chr1_1:60522397-60522416 Msa0033180:intron 30.0%
AATAGTAACATATCCCTCAA+TGG - chr1_1:60522499-60522518 None:intergenic 30.0%
AGTTCTATTCAATGAGACTT+TGG + chr1_1:60523043-60523062 Msa0033180:intron 30.0%
TCCATATAGGCATTTAAGAA+TGG - chr1_1:60523099-60523118 None:intergenic 30.0%
AATGCCTATATGGATTCATT+TGG + chr1_1:60523105-60523124 Msa0033180:CDS 30.0%
TTGGAATTGAGGCAATTATT+TGG - chr1_1:60523499-60523518 None:intergenic 30.0%
CAATAGAATTGTTGGAATTG+AGG - chr1_1:60523510-60523529 None:intergenic 30.0%
CTCAATTCCAACAATTCTAT+TGG + chr1_1:60523508-60523527 Msa0033180:CDS 30.0%
! GGAATTTGAAACTGGAATAA+AGG + chr1_1:60523529-60523548 Msa0033180:CDS 30.0%
! TTTGAAACTGGAATAAAGGT+TGG + chr1_1:60523533-60523552 Msa0033180:intron 30.0%
ATCTTGCAGATGTAGATTAA+AGG - chr1_1:60523827-60523846 None:intergenic 30.0%
TAACATTTACATCTAGACAC+TGG - chr1_1:60523870-60523889 None:intergenic 30.0%
! AGGCAATAATGAAATTTTGC+TGG - chr1_1:60523964-60523983 None:intergenic 30.0%
TTGTATGCTTATTTGTTTGC+AGG + chr1_1:60524011-60524030 Msa0033180:intron 30.0%
TGTATGCTTATTTGTTTGCA+GGG + chr1_1:60524012-60524031 Msa0033180:intron 30.0%
ATAGTAGTGTGTATGTAAGT+TGG + chr1_1:60524159-60524178 Msa0033180:intron 30.0%
TAGTAGTGTGTATGTAAGTT+GGG + chr1_1:60524160-60524179 Msa0033180:intron 30.0%
!! TGATGCAACATATTGATTTG+TGG - chr1_1:60524207-60524226 None:intergenic 30.0%
AACTCAATTATAACTTGGGT+CGG + chr1_1:60524511-60524530 Msa0033180:intron 30.0%
AATCAGACTCTCTAGTATAT+TGG + chr1_1:60524940-60524959 Msa0033180:intron 30.0%
CAGACAAGTATACAACTAAA+TGG - chr1_1:60525085-60525104 None:intergenic 30.0%
CACTCTAATGAGTTGTTAAT+AGG - chr1_1:60525125-60525144 None:intergenic 30.0%
CTATTAACAACTCATTAGAG+TGG + chr1_1:60525123-60525142 Msa0033180:intron 30.0%
! AAATTGATTTAGTTGCAAGG+AGG + chr1_1:60525483-60525502 Msa0033180:intron 30.0%
TGCTTATAATAATGATCGGA+TGG + chr1_1:60525913-60525932 Msa0033180:intron 30.0%
ACAAAAATAATGCACAAGTG+GGG + chr1_1:60526049-60526068 Msa0033180:intron 30.0%
AGTTTGAGAAATGAGACTAA+AGG + chr1_1:60526776-60526795 Msa0033180:intron 30.0%
! CTCATCAACTTTAAAGGTAA+AGG + chr1_1:60526912-60526931 Msa0033180:intron 30.0%
ACATAAGATGTTTCGTTTGT+TGG - chr1_1:60526999-60527018 None:intergenic 30.0%
TTCTGTTCTTAAAATCTGGA+CGG + chr1_1:60527148-60527167 Msa0033180:intron 30.0%
TCTATGTATTCACGTAATCT+GGG - chr1_1:60527203-60527222 None:intergenic 30.0%
ATCTATGTATTCACGTAATC+TGG - chr1_1:60527204-60527223 None:intergenic 30.0%
CTGGTATTTGGAAATAAGAA+AGG + chr1_1:60527344-60527363 Msa0033180:intron 30.0%
AAGGTTACACTGTCATATAA+TGG + chr1_1:60527363-60527382 Msa0033180:intron 30.0%
TATTCTATCCAATGCAATTC+TGG + chr1_1:60527389-60527408 Msa0033180:intron 30.0%
TCAAAAAACCAGAATTGCAT+TGG - chr1_1:60527400-60527419 None:intergenic 30.0%
TCCAAATAGGCATTTAAGAA+TGG - chr1_1:60527445-60527464 None:intergenic 30.0%
AATGCCTATTTGGATTCATT+TGG + chr1_1:60527451-60527470 Msa0033180:CDS 30.0%
AATTTCTGCTATTCAAAGCT+CGG + chr1_1:60527581-60527600 Msa0033180:CDS 30.0%
AATGATCACAATCATGTTTC+AGG + chr1_1:60527711-60527730 Msa0033180:intron 30.0%
!!! GGTCATACTCGTAAATTTTT+TGG - chr1_1:60527737-60527756 None:intergenic 30.0%
AAAAATTTACGAGTATGACC+CGG + chr1_1:60527737-60527756 Msa0033180:CDS 30.0%
CAATAGAATTGTTGGAATTG+AGG - chr1_1:60523510-60523529 None:intergenic 30.0%
CTCAATTCCAACAATTCTAT+TGG + chr1_1:60523508-60523527 Msa0033180:CDS 30.0%
! GGAATTTGAAACTGGAATAA+AGG + chr1_1:60523529-60523548 Msa0033180:CDS 30.0%
! TTTGAAACTGGAATAAAGGT+TGG + chr1_1:60523533-60523552 Msa0033180:intron 30.0%
!! GCTCATTTTATTTCCCAATT+TGG + chr1_1:60528089-60528108 Msa0033180:intron 30.0%
GATTTCTGTAGTAAATTGCA+TGG + chr1_1:60528194-60528213 Msa0033180:CDS 30.0%
TAACATTTACATCTGGATAC+TGG - chr1_1:60528220-60528239 None:intergenic 30.0%
ATTGCAAATTACTCACAACA+TGG + chr1_1:60528275-60528294 Msa0033180:CDS 30.0%
TTGTATGGTTATTTGTTTGC+AGG + chr1_1:60528360-60528379 Msa0033180:intron 30.0%
TGTATGGTTATTTGTTTGCA+GGG + chr1_1:60528361-60528380 Msa0033180:intron 30.0%
GAGAAACAAAGGTCTTAAAT+GGG + chr1_1:60528457-60528476 Msa0033180:CDS 30.0%
!!! TGTGCTATTTTGCATGTGTT+TGG + chr1_1:60517003-60517022 Msa0033180:CDS 35.0%
! ATTTTGCATGTGTTTGGTTG+TGG + chr1_1:60517009-60517028 Msa0033180:CDS 35.0%
! TTGAAGTGATTTTGTCCGTA+AGG - chr1_1:60517139-60517158 None:intergenic 35.0%
CATCAACATCTTTAGTTGAG+TGG - chr1_1:60517355-60517374 None:intergenic 35.0%
!! AACGGTCTAGATTTCAAGTT+TGG - chr1_1:60517446-60517465 None:intergenic 35.0%
TCTCTAACTATGTGAATGCA+TGG + chr1_1:60517478-60517497 Msa0033180:intron 35.0%
! AATGATGATGTGACATGTAG+TGG - chr1_1:60517614-60517633 None:intergenic 35.0%
GGATAAGAGAAAAAGTAGGA+GGG - chr1_1:60517760-60517779 None:intergenic 35.0%
GTTGGGATAAGAGAAAAAGT+AGG - chr1_1:60517764-60517783 None:intergenic 35.0%
ACTTGAGAGTGATGTTTGTT+GGG - chr1_1:60517781-60517800 None:intergenic 35.0%
AACTTGAGAGTGATGTTTGT+TGG - chr1_1:60517782-60517801 None:intergenic 35.0%
! AATGATGATGTGACATGTAG+TGG - chr1_1:60517614-60517633 None:intergenic 35.0%
GGATAAGAGAAAAAGTAGGA+GGG - chr1_1:60517760-60517779 None:intergenic 35.0%
GTTGGGATAAGAGAAAAAGT+AGG - chr1_1:60517764-60517783 None:intergenic 35.0%
ACTTGAGAGTGATGTTTGTT+GGG - chr1_1:60517781-60517800 None:intergenic 35.0%
AACTTGAGAGTGATGTTTGT+TGG - chr1_1:60517782-60517801 None:intergenic 35.0%
GAAAAAGTAGGAGGGAAAAA+AGG - chr1_1:60518151-60518170 None:intergenic 35.0%
TCGAAAAGGATTAAAGACGT+GGG - chr1_1:60518399-60518418 None:intergenic 35.0%
TTCGAAAAGGATTAAAGACG+TGG - chr1_1:60518400-60518419 None:intergenic 35.0%
!! CCATAAGCTGATTTTCGAAA+AGG - chr1_1:60518413-60518432 None:intergenic 35.0%
! CCTTTTCGAAAATCAGCTTA+TGG + chr1_1:60518410-60518429 Msa0033180:intron 35.0%
CGTGAAAAAGGGATAATTTG+TGG + chr1_1:60518472-60518491 Msa0033180:intron 35.0%
ATCTAACAAGATCACTAGAG+TGG + chr1_1:60518528-60518547 Msa0033180:intron 35.0%
ATGGATCTTACTTACTGAAG+AGG - chr1_1:60518565-60518584 None:intergenic 35.0%
! AATCTAAGGCCAAGAATGAA+TGG - chr1_1:60518743-60518762 None:intergenic 35.0%
GGAATCTGTATCAAAAACAG+AGG - chr1_1:60518805-60518824 None:intergenic 35.0%
! GTTTTTGATACAGATTCCAG+AGG + chr1_1:60518807-60518826 Msa0033180:intron 35.0%
AGACCAAACTATGATTCTAG+GGG - chr1_1:60518835-60518854 None:intergenic 35.0%
GAGACCAAACTATGATTCTA+GGG - chr1_1:60518836-60518855 None:intergenic 35.0%
ACTTAACACTACATGCAATC+TGG - chr1_1:60518985-60519004 None:intergenic 35.0%
! ATGGTTCTATTGGATTGATG+AGG + chr1_1:60519294-60519313 Msa0033180:intron 35.0%
CGAATCTTCATAATCGCATT+TGG - chr1_1:60519470-60519489 None:intergenic 35.0%
!! TGATTTGCTTGACTGATTGT+TGG + chr1_1:60519719-60519738 Msa0033180:intron 35.0%
!! TCCTTTTGCTACCATTTTTG+TGG + chr1_1:60519783-60519802 Msa0033180:intron 35.0%
ACCACAAAAATGGTAGCAAA+AGG - chr1_1:60519787-60519806 None:intergenic 35.0%
AACAATCTTTGGACAACTCA+AGG - chr1_1:60519889-60519908 None:intergenic 35.0%
GAAAGTGATGAACCATTTGT+GGG - chr1_1:60519925-60519944 None:intergenic 35.0%
AGAAAGTGATGAACCATTTG+TGG - chr1_1:60519926-60519945 None:intergenic 35.0%
ATGAGACATTGTTATGCCTT+TGG + chr1_1:60520174-60520193 Msa0033180:intron 35.0%
TGAGACATTGTTATGCCTTT+GGG + chr1_1:60520175-60520194 Msa0033180:intron 35.0%
AGATATTACTCACTACCCAA+AGG - chr1_1:60520193-60520212 None:intergenic 35.0%
TTTGGGTAGTGAGTAATATC+TGG + chr1_1:60520192-60520211 Msa0033180:intron 35.0%
ACATGTATGGAGTTGTAAGA+TGG + chr1_1:60520346-60520365 Msa0033180:intron 35.0%
CATGTATGGAGTTGTAAGAT+GGG + chr1_1:60520347-60520366 Msa0033180:intron 35.0%
ACCGGTCATAAAATGATGTT+TGG + chr1_1:60520408-60520427 Msa0033180:intron 35.0%
AAATTAAGGTGGCAAACATG+TGG - chr1_1:60520467-60520486 None:intergenic 35.0%
! GTAGTCTAGTCAAACTTTTG+AGG - chr1_1:60520845-60520864 None:intergenic 35.0%
ACATGTAAGGTCAAAAGATG+GGG - chr1_1:60521476-60521495 None:intergenic 35.0%
GTCAGTTACACATACATGTA+AGG - chr1_1:60521489-60521508 None:intergenic 35.0%
! GTGAGATAGTTGACTTTGTT+AGG - chr1_1:60521581-60521600 None:intergenic 35.0%
! ATCCCATGTCCTTATTTCAA+AGG + chr1_1:60521601-60521620 Msa0033180:intron 35.0%
TGAACCAACATCATCAAGTT+TGG - chr1_1:60522532-60522551 None:intergenic 35.0%
! TAGACTAATGTTACTTGGCT+TGG + chr1_1:60522676-60522695 Msa0033180:intron 35.0%
! TTCCGAAGTATCAACCAAAA+AGG - chr1_1:60522702-60522721 None:intergenic 35.0%
TATTGATGCAGTGAATGCAA+CGG + chr1_1:60523068-60523087 Msa0033180:intron 35.0%
GCCATTCTTAAATGCCTATA+TGG + chr1_1:60523095-60523114 Msa0033180:CDS 35.0%
TTGCATCCTTGATGGAAATT+CGG - chr1_1:60523135-60523154 None:intergenic 35.0%
AGTTTCTGCTATTCAAAGCT+CGG + chr1_1:60523235-60523254 Msa0033180:CDS 35.0%
!!! ACTTGGTTTTGACATTGAAG+TGG - chr1_1:60523309-60523328 None:intergenic 35.0%
AATGATCCCAATCATGTTTC+AGG + chr1_1:60523362-60523381 Msa0033180:intron 35.0%
TTCTTGCCTGAAACATGATT+GGG - chr1_1:60523371-60523390 None:intergenic 35.0%
TTTCTTGCCTGAAACATGAT+TGG - chr1_1:60523372-60523391 None:intergenic 35.0%
! GGGTTATACACTTTTGACAT+TGG + chr1_1:60523431-60523450 Msa0033180:CDS 35.0%
GTCTTGTGAATAAAATGCGA+TGG - chr1_1:60523471-60523490 None:intergenic 35.0%
! CGCATTTTATTCACAAGACT+TGG + chr1_1:60523472-60523491 Msa0033180:CDS 35.0%
GCCAAATTGGGCAATAAAAT+GGG - chr1_1:60523743-60523762 None:intergenic 35.0%
TGCCAAATTGGGCAATAAAA+TGG - chr1_1:60523744-60523763 None:intergenic 35.0%
! CTAGTTCATCAAGCTTTGAT+GGG - chr1_1:60523771-60523790 None:intergenic 35.0%
!! GATTAAAGGCTTTAGAAGCT+TGG - chr1_1:60523813-60523832 None:intergenic 35.0%
AGATTTCTGCAGTAAATTGC+AGG + chr1_1:60523843-60523862 Msa0033180:intron 35.0%
GATTTCTGCAGTAAATTGCA+GGG + chr1_1:60523844-60523863 Msa0033180:intron 35.0%
TGCAATGAGGTCTAATTGTA+TGG - chr1_1:60523911-60523930 None:intergenic 35.0%
! TTAATGACTGTCGTGAGTTT+TGG - chr1_1:60523989-60524008 None:intergenic 35.0%
TATCCACAACAAGCCATAAT+CGG - chr1_1:60524047-60524066 None:intergenic 35.0%
!! ATTATGGCTTGTTGTGGATA+TGG + chr1_1:60524047-60524066 Msa0033180:intron 35.0%
TGTATCTTGTGGAGAAACAA+GGG + chr1_1:60524097-60524116 Msa0033180:intron 35.0%
!! AACATATTGATTTGTGGCCT+CGG - chr1_1:60524201-60524220 None:intergenic 35.0%
TGTATCGAGTGCATAAAAAC+TGG + chr1_1:60524406-60524425 Msa0033180:intron 35.0%
!! TATTTTGAGTACTGTCTGTG+AGG + chr1_1:60524676-60524695 Msa0033180:intron 35.0%
TGAGTTTGTCACTAGAAAGA+GGG - chr1_1:60524834-60524853 None:intergenic 35.0%
ATGAGTTTGTCACTAGAAAG+AGG - chr1_1:60524835-60524854 None:intergenic 35.0%
! GTGTTCTAAGTGTCATTACT+CGG - chr1_1:60524894-60524913 None:intergenic 35.0%
AAGTATACAACTAAATGGCG+TGG - chr1_1:60525080-60525099 None:intergenic 35.0%
TAAGAAACAGGGAAACACTA+AGG + chr1_1:60525507-60525526 Msa0033180:intron 35.0%
ATCTACATAGTGGTAATTGG+GGG - chr1_1:60526082-60526101 None:intergenic 35.0%
GATCTACATAGTGGTAATTG+GGG - chr1_1:60526083-60526102 None:intergenic 35.0%
GGATCTACATAGTGGTAATT+GGG - chr1_1:60526084-60526103 None:intergenic 35.0%
!! AAGTCAACAGAATTTGCTAC+AGG - chr1_1:60526516-60526535 None:intergenic 35.0%
TATCCAACAGCTTTCAACTT+TGG + chr1_1:60526540-60526559 Msa0033180:CDS 35.0%
! TTGGCTCATACTTGTTAGTA+TGG - chr1_1:60526980-60526999 None:intergenic 35.0%
ATTGTTGGATCAAGATCAGA+CGG + chr1_1:60527078-60527097 Msa0033180:intron 35.0%
! TTTTGATGCAGTGAATGCAA+CGG + chr1_1:60527414-60527433 Msa0033180:intron 35.0%
GCCATTCTTAAATGCCTATT+TGG + chr1_1:60527441-60527460 Msa0033180:CDS 35.0%
CAAGCCAAATGAATCCAAAT+AGG - chr1_1:60527458-60527477 None:intergenic 35.0%
! TTGCATCCATGATGGAAATT+TGG - chr1_1:60527481-60527500 None:intergenic 35.0%
ATTTCTGCTATTCAAAGCTC+GGG + chr1_1:60527582-60527601 Msa0033180:CDS 35.0%
TTCTCGAAATAATCTTTGGC+CGG - chr1_1:60527759-60527778 None:intergenic 35.0%
GCCAAAGATTATTTCGAGAA+GGG + chr1_1:60527759-60527778 Msa0033180:CDS 35.0%
CCAAAGATTATTTCGAGAAG+GGG + chr1_1:60527760-60527779 Msa0033180:CDS 35.0%
TTGGAATTGAGGCAATTATC+TGG - chr1_1:60527848-60527867 None:intergenic 35.0%
ATACATAATGTGAGTCCACT+CGG + chr1_1:60528059-60528078 Msa0033180:intron 35.0%
!!! TGCAATGAGGTCTAGTTTTA+TGG - chr1_1:60528261-60528280 None:intergenic 35.0%
! GTTGTGAGTAATTTGCAATG+AGG - chr1_1:60528274-60528293 None:intergenic 35.0%
CGACAGTCATTAAACTTGTA+TGG + chr1_1:60528345-60528364 Msa0033180:intron 35.0%
TATCCACAACAAGCCATAAT+TGG - chr1_1:60524047-60524066 None:intergenic 35.0%
!! ATTATGGCTTGTTGTGGATA+TGG + chr1_1:60524047-60524066 Msa0033180:intron 35.0%
GGAGAAACAAAGGTCTTAAA+TGG + chr1_1:60528456-60528475 Msa0033180:CDS 35.0%
AACAAAGGTCTTAAATGGGA+CGG + chr1_1:60528461-60528480 Msa0033180:CDS 35.0%
ATAGTAGTGTGTATGTAAGC+TGG + chr1_1:60528508-60528527 Msa0033180:CDS 35.0%
TAGTAGTGTGTATGTAAGCT+GGG + chr1_1:60528509-60528528 Msa0033180:CDS 35.0%
!! TGATGCAACATATCGATTTG+TGG - chr1_1:60528556-60528575 None:intergenic 35.0%
!! TGTTGTTGACTTCAGTTACC+CGG + chr1_1:60517039-60517058 Msa0033180:CDS 40.0%
TCACCAAAGTTGAAAACTGC+CGG - chr1_1:60517061-60517080 None:intergenic 40.0%
! AGTGATTTTGTCCGTAAGGT+GGG - chr1_1:60517135-60517154 None:intergenic 40.0%
! AAGTGATTTTGTCCGTAAGG+TGG - chr1_1:60517136-60517155 None:intergenic 40.0%
AATCACTTCAAAACTCCGTC+TGG + chr1_1:60517148-60517167 Msa0033180:CDS 40.0%
ATCACTTCAAAACTCCGTCT+GGG + chr1_1:60517149-60517168 Msa0033180:CDS 40.0%
GGGATAAGAGAAAAAGTAGG+AGG - chr1_1:60517761-60517780 None:intergenic 40.0%
GGGATAAGAGAAAAAGTAGG+AGG - chr1_1:60517761-60517780 None:intergenic 40.0%
TGTCGTAGAGAGAAGAAAGA+GGG - chr1_1:60518267-60518286 None:intergenic 40.0%
GGTTGAGAGATGAAGAAAGA+GGG - chr1_1:60518354-60518373 None:intergenic 40.0%
AAAAGGATTAAAGACGTGGG+TGG - chr1_1:60518396-60518415 None:intergenic 40.0%
ATTCAGCAAGCACGTGAAAA+AGG + chr1_1:60518460-60518479 Msa0033180:intron 40.0%
TTCAGCAAGCACGTGAAAAA+GGG + chr1_1:60518461-60518480 Msa0033180:intron 40.0%
CTGTATTAGGGTTATGCATC+TGG + chr1_1:60518687-60518706 Msa0033180:intron 40.0%
GAACCCCTAGAATCATAGTT+TGG + chr1_1:60518829-60518848 Msa0033180:intron 40.0%
GGAGACCAAACTATGATTCT+AGG - chr1_1:60518837-60518856 None:intergenic 40.0%
!!! CAATGGGGTTTTGAAATGCT+TGG + chr1_1:60519063-60519082 Msa0033180:intron 40.0%
TTGTTGAGGTGGTTAAAAGG+TGG + chr1_1:60519258-60519277 Msa0033180:intron 40.0%
TGGATTGATGAGGAACAGAT+TGG + chr1_1:60519304-60519323 Msa0033180:intron 40.0%
GGATTGATGAGGAACAGATT+GGG + chr1_1:60519305-60519324 Msa0033180:intron 40.0%
TATCAATTGTCAACCACAGG+AGG - chr1_1:60519620-60519639 None:intergenic 40.0%
GAGTATCAATTGTCAACCAC+AGG - chr1_1:60519623-60519642 None:intergenic 40.0%
TGTTGGAGCAAAGAATCACA+AGG + chr1_1:60519736-60519755 Msa0033180:intron 40.0%
GTAGAGGTAGACCACAAAAA+TGG - chr1_1:60519797-60519816 None:intergenic 40.0%
CAATTTCAAACGCCCACAAA+TGG + chr1_1:60519910-60519929 Msa0033180:intron 40.0%
TGATATGGCAGTAGACTAAG+TGG + chr1_1:60520281-60520300 Msa0033180:intron 40.0%
GAAGACATGGAGTATGTAGT+AGG - chr1_1:60520982-60521001 None:intergenic 40.0%
!! TCCATGTCTTCATCGATTTG+TGG + chr1_1:60520991-60521010 Msa0033180:intron 40.0%
TATGTAGGAATTGGCCATTG+AGG + chr1_1:60522482-60522501 Msa0033180:intron 40.0%
ATGTAGGAATTGGCCATTGA+GGG + chr1_1:60522483-60522502 Msa0033180:intron 40.0%
AAGTGTCTCTCATGATGAGA+AGG + chr1_1:60522560-60522579 Msa0033180:intron 40.0%
!!! GGCCTTTTTGGTTGATACTT+CGG + chr1_1:60522697-60522716 Msa0033180:intron 40.0%
!!! CACGGGCAAAAGTTTTATTG+TGG - chr1_1:60522921-60522940 None:intergenic 40.0%
GGTTTACCGAATTTCCATCA+AGG + chr1_1:60523126-60523145 Msa0033180:CDS 40.0%
ATCAGGTTCATCTATCCTAC+CGG + chr1_1:60523164-60523183 Msa0033180:CDS 40.0%
GTTTCTGCTATTCAAAGCTC+GGG + chr1_1:60523236-60523255 Msa0033180:CDS 40.0%
TCTCGAAATAATCTTCGGCT+GGG - chr1_1:60523409-60523428 None:intergenic 40.0%
TTCTCGAAATAATCTTCGGC+TGG - chr1_1:60523410-60523429 None:intergenic 40.0%
AGCCGAAGATTATTTCGAGA+AGG + chr1_1:60523409-60523428 Msa0033180:CDS 40.0%
GCCGAAGATTATTTCGAGAA+GGG + chr1_1:60523410-60523429 Msa0033180:CDS 40.0%
CCCCTTCTCGAAATAATCTT+CGG - chr1_1:60523414-60523433 None:intergenic 40.0%
CCGAAGATTATTTCGAGAAG+GGG + chr1_1:60523411-60523430 Msa0033180:CDS 40.0%
ATACATAACACGAGTCCACT+CGG + chr1_1:60523709-60523728 Msa0033180:CDS 40.0%
! GCCCATTTTATTGCCCAATT+TGG + chr1_1:60523739-60523758 Msa0033180:CDS 40.0%
! CCTAGTTCATCAAGCTTTGA+TGG - chr1_1:60523772-60523791 None:intergenic 40.0%
CCATCAAAGCTTGATGAACT+AGG + chr1_1:60523769-60523788 Msa0033180:CDS 40.0%
TTTAGTTACCATGCTGTGAG+TGG - chr1_1:60523936-60523955 None:intergenic 40.0%
AGGGTTTGAACAACCGATTA+TGG + chr1_1:60524031-60524050 Msa0033180:intron 40.0%
ACACGACTGTCATAGTTCAA+TGG - chr1_1:60524080-60524099 None:intergenic 40.0%
TATGACAGTCGTGTATCTTG+TGG + chr1_1:60524086-60524105 Msa0033180:intron 40.0%
GTGTATCTTGTGGAGAAACA+AGG + chr1_1:60524096-60524115 Msa0033180:intron 40.0%
GAGAAACAAGGGTCTTGAAT+GGG + chr1_1:60524108-60524127 Msa0033180:intron 40.0%
!! GCAACCTTTTGCTGTAACAA+TGG - chr1_1:60524135-60524154 None:intergenic 40.0%
! AGTGTGTATGTAAGTTGGGA+CGG + chr1_1:60524164-60524183 Msa0033180:intron 40.0%
GTTGCATCACAAATTCTCAC+TGG + chr1_1:60524218-60524237 Msa0033180:intron 40.0%
ATTGTGTGACATTCCTCAAG+TGG - chr1_1:60524858-60524877 None:intergenic 40.0%
GGAATGTCACACAATCATGT+AGG + chr1_1:60524863-60524882 Msa0033180:intron 40.0%
!!! TCTTTTGGGTGTTTGGTTTG+AGG - chr1_1:60525049-60525068 None:intergenic 40.0%
!! TTCACTCTCTTTTGGGTGTT+TGG - chr1_1:60525056-60525075 None:intergenic 40.0%
AATAGGCTTGTGTTCAGAGA+CGG + chr1_1:60525228-60525247 Msa0033180:intron 40.0%
TTGCAAGGAGGATAAGAAAC+AGG + chr1_1:60525495-60525514 Msa0033180:intron 40.0%
TGCAAGGAGGATAAGAAACA+GGG + chr1_1:60525496-60525515 Msa0033180:intron 40.0%
!! AAACACTAAGGAGTGCCTAT+TGG + chr1_1:60525519-60525538 Msa0033180:intron 40.0%
!! AACACTAAGGAGTGCCTATT+GGG + chr1_1:60525520-60525539 Msa0033180:intron 40.0%
!! TCCTTAAAGAGTGTCCCAAT+AGG - chr1_1:60525537-60525556 None:intergenic 40.0%
GAATACTTACATACACCCTC+CGG + chr1_1:60525778-60525797 Msa0033180:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr1_1:60525796-60525815 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr1_1:60525797-60525816 None:intergenic 40.0%
! ACGCACTGAACAAGTTTTTG+TGG + chr1_1:60525971-60525990 Msa0033180:intron 40.0%
! CACTGAACAAGTTTTTGTGG+AGG + chr1_1:60525974-60525993 Msa0033180:intron 40.0%
CGGATCTACATAGTGGTAAT+TGG - chr1_1:60526085-60526104 None:intergenic 40.0%
CACAGTGCATCAGATGATTA+AGG - chr1_1:60526164-60526183 None:intergenic 40.0%
CTTAATCATCTGATGCACTG+TGG + chr1_1:60526162-60526181 Msa0033180:intron 40.0%
CAAGTGAAAGTTGAGTGACA+TGG + chr1_1:60526440-60526459 Msa0033180:intron 40.0%
TCACCAAAGTTGAAAGCTGT+TGG - chr1_1:60526546-60526565 None:intergenic 40.0%
! CAACTTTGGTGATTCAACCT+CGG + chr1_1:60526554-60526573 Msa0033180:CDS 40.0%
TTGAAGTGATTCTGTCCGTA+AGG - chr1_1:60526624-60526643 None:intergenic 40.0%
AATCACTTCAAAACTCCGTC+TGG + chr1_1:60517148-60517167 Msa0033180:CDS 40.0%
ATCACTTCAAAACTCCGTCT+GGG + chr1_1:60517149-60517168 Msa0033180:CDS 40.0%
CGTAGCTAAGAGAGATCTAA+CGG - chr1_1:60526831-60526850 None:intergenic 40.0%
CGTTAGATCTCTCTTAGCTA+CGG + chr1_1:60526829-60526848 Msa0033180:intron 40.0%
TCTTAGCTACGGAAAACACA+GGG + chr1_1:60526840-60526859 Msa0033180:intron 40.0%
ATGCTTCGGTTGCATGAATA+GGG + chr1_1:60526868-60526887 Msa0033180:intron 40.0%
CCAACAATCTTCAACTTCTC+TGG - chr1_1:60527066-60527085 None:intergenic 40.0%
CCAGAGAAGTTGAAGATTGT+TGG + chr1_1:60527063-60527082 Msa0033180:intron 40.0%
ACGGTCTGATCTTGATTCAA+CGG + chr1_1:60527167-60527186 Msa0033180:intron 40.0%
TCTCGAAATAATCTTTGGCC+GGG - chr1_1:60527758-60527777 None:intergenic 40.0%
GGCCAAAGATTATTTCGAGA+AGG + chr1_1:60527758-60527777 Msa0033180:CDS 40.0%
CCCCTTCTCGAAATAATCTT+TGG - chr1_1:60523414-60523433 None:intergenic 40.0%
!! CGCGTTTTATTCACAAGACT+TGG + chr1_1:60527821-60527840 Msa0033180:CDS 40.0%
! TGATGGATCAGTGCCAAATT+GGG - chr1_1:60528105-60528124 None:intergenic 40.0%
! TTGATGGATCAGTGCCAAAT+TGG - chr1_1:60528106-60528125 None:intergenic 40.0%
! CCTAGTTCATCAAGCTTTGA+TGG - chr1_1:60523772-60523791 None:intergenic 40.0%
CCATCAAAGCTTGATGAACT+AGG + chr1_1:60523769-60523788 Msa0033180:CDS 40.0%
AGGGTTTGAACAGCCAATTA+TGG + chr1_1:60528380-60528399 Msa0033180:intron 40.0%
ACGCGACTATCATAGTTCAA+CGG - chr1_1:60528429-60528448 None:intergenic 40.0%
TATGATAGTCGCGTTTCTTG+TGG + chr1_1:60528435-60528454 Msa0033180:CDS 40.0%
CGTTTCTTGTGGAGAAACAA+AGG + chr1_1:60528446-60528465 Msa0033180:CDS 40.0%
GTTGCATCACAAATTCTCAC+TGG + chr1_1:60524218-60524237 Msa0033180:intron 40.0%
! TACCCGGCAGTTTTCAACTT+TGG + chr1_1:60517055-60517074 Msa0033180:CDS 45.0%
CACCAAAGTTGAAAACTGCC+GGG - chr1_1:60517060-60517079 None:intergenic 45.0%
GGTGATTCAAACTCAGACAC+AGG + chr1_1:60517076-60517095 Msa0033180:CDS 45.0%
GATTCAAACTCAGACACAGG+TGG + chr1_1:60517079-60517098 Msa0033180:CDS 45.0%
! TGATTTTGTCCGTAAGGTGG+GGG - chr1_1:60517133-60517152 None:intergenic 45.0%
! GTGATTTTGTCCGTAAGGTG+GGG - chr1_1:60517134-60517153 None:intergenic 45.0%
TAGAGATGTCGGTGGTCAAA+CGG - chr1_1:60517464-60517483 None:intergenic 45.0%
CACATAGTTAGAGATGTCGG+TGG - chr1_1:60517472-60517491 None:intergenic 45.0%
GAGGATGTGACACATTGGAT+TGG - chr1_1:60517588-60517607 None:intergenic 45.0%
ATGTGACATGTAGTGGCTTG+AGG - chr1_1:60517607-60517626 None:intergenic 45.0%
GAGGATGTGACACATTGGAT+TGG - chr1_1:60517588-60517607 None:intergenic 45.0%
ATGTGACATGTAGTGGCTTG+AGG - chr1_1:60517607-60517626 None:intergenic 45.0%
GAGATGAAGAGATGAGAGAG+AGG - chr1_1:60518228-60518247 None:intergenic 45.0%
AAGAAAGAGGGAGGAGGAAT+CGG - chr1_1:60518255-60518274 None:intergenic 45.0%
CTGTCGTAGAGAGAAGAAAG+AGG - chr1_1:60518268-60518287 None:intergenic 45.0%
AAGAAAGAGGGAGGAGGAAT+CGG - chr1_1:60518255-60518274 None:intergenic 45.0%
TGAGAGATGAAGAAAGAGGG+AGG - chr1_1:60518351-60518370 None:intergenic 45.0%
CGGTTGAGAGATGAAGAAAG+AGG - chr1_1:60518355-60518374 None:intergenic 45.0%
! GGGATAATTTGTGGGTGTCA+AGG + chr1_1:60518481-60518500 Msa0033180:intron 45.0%
! TATGATTCTAGGGGTTCCTC+TGG - chr1_1:60518826-60518845 None:intergenic 45.0%
GCCACAAATCGATGAAGACA+TGG - chr1_1:60520995-60521014 None:intergenic 45.0%
GTCACGTGAAACTGATGAGT+AGG + chr1_1:60521420-60521439 Msa0033180:intron 45.0%
!! GGAGCCAAACTTGATGATGT+TGG + chr1_1:60522525-60522544 Msa0033180:intron 45.0%
!!! GTTACTTGGCTTGGCCTTTT+TGG + chr1_1:60522685-60522704 Msa0033180:intron 45.0%
CAGCAAAGTTGCATCCTTGA+TGG - chr1_1:60523143-60523162 None:intergenic 45.0%
! ACAGCGGGGCTAGAAATTTT+TGG + chr1_1:60523686-60523705 Msa0033180:CDS 45.0%
! TGATGGGTCAGTGCCAAATT+GGG - chr1_1:60523755-60523774 None:intergenic 45.0%
! TTGATGGGTCAGTGCCAAAT+TGG - chr1_1:60523756-60523775 None:intergenic 45.0%
ATTGCAAACCACTCACAGCA+TGG + chr1_1:60523925-60523944 Msa0033180:intron 45.0%
!! CAACCGATTATGGCTTGTTG+TGG + chr1_1:60524041-60524060 Msa0033180:intron 45.0%
!! ATGGCTTGTTGTGGATATGG+AGG + chr1_1:60524050-60524069 Msa0033180:intron 45.0%
CGACTGTCATAGTTCAATGG+CGG - chr1_1:60524077-60524096 None:intergenic 45.0%
GGAGAAACAAGGGTCTTGAA+TGG + chr1_1:60524107-60524126 Msa0033180:intron 45.0%
GGGACCATTGTTACAGCAAA+AGG + chr1_1:60524128-60524147 Msa0033180:intron 45.0%
! GTGTGTATGTAAGTTGGGAC+GGG + chr1_1:60524165-60524184 Msa0033180:intron 45.0%
! TGTGTATGTAAGTTGGGACG+GGG + chr1_1:60524166-60524185 Msa0033180:intron 45.0%
GTGACAAACTCATCCACTTG+AGG + chr1_1:60524842-60524861 Msa0033180:intron 45.0%
! GTCTGATTCGTCTTGATCGT+GGG - chr1_1:60524928-60524947 None:intergenic 45.0%
! AGTCTGATTCGTCTTGATCG+TGG - chr1_1:60524929-60524948 None:intergenic 45.0%
GCCTATTGGGACACTCTTTA+AGG + chr1_1:60525533-60525552 Msa0033180:intron 45.0%
! TTGGGACACTCTTTAAGGAC+TGG + chr1_1:60525538-60525557 Msa0033180:intron 45.0%
GGATGGTGTACGTAGTATCA+TGG + chr1_1:60525930-60525949 Msa0033180:intron 45.0%
AGTGATTCTGTCCGTAAGGT+GGG - chr1_1:60526620-60526639 None:intergenic 45.0%
AAGTGATTCTGTCCGTAAGG+TGG - chr1_1:60526621-60526640 None:intergenic 45.0%
CCATCACAAAATCTCCCAGA+CGG - chr1_1:60526651-60526670 None:intergenic 45.0%
CTCTTAGCTACGGAAAACAC+AGG + chr1_1:60526839-60526858 Msa0033180:intron 45.0%
AACACAGGGCTTACATGCTT+CGG + chr1_1:60526854-60526873 Msa0033180:intron 45.0%
CATGCTTCGGTTGCATGAAT+AGG + chr1_1:60526867-60526886 Msa0033180:intron 45.0%
TGCTTCGGTTGCATGAATAG+GGG + chr1_1:60526869-60526888 Msa0033180:intron 45.0%
GGCTTGCCAAATTTCCATCA+TGG + chr1_1:60527472-60527491 Msa0033180:CDS 45.0%
CTGCAAAGTTGCATCCATGA+TGG - chr1_1:60527489-60527508 None:intergenic 45.0%
CGGGTTCTCAAATTACTTGC+AGG + chr1_1:60527601-60527620 Msa0033180:CDS 45.0%
CAGCTAAGTTGTGTTCACGA+AGG - chr1_1:60528148-60528167 None:intergenic 45.0%
!! CAGCCAATTATGGCTTGTTG+TGG + chr1_1:60528390-60528409 Msa0033180:CDS 45.0%
!! ATGGCTTGTTGTGGATATGG+AGG + chr1_1:60524050-60524069 Msa0033180:intron 45.0%
CGACTATCATAGTTCAACGG+CGG - chr1_1:60528426-60528445 None:intergenic 45.0%
AGTGTGTATGTAAGCTGGGA+TGG + chr1_1:60528513-60528532 Msa0033180:CDS 45.0%
!! ATTATATTAATTAATAAGTT+TGG - chr1_1:60520921-60520940 None:intergenic 5.0%
!! TTAAATATAAATATTATGTT+TGG - chr1_1:60522787-60522806 None:intergenic 5.0%
!! TATATATATATATATATAAC+TGG + chr1_1:60527325-60527344 Msa0033180:intron 5.0%
AATCAACTGCCCCCACCTTA+CGG + chr1_1:60517121-60517140 Msa0033180:CDS 50.0%
GGCTTGAGGATGTGACACAT+TGG - chr1_1:60517593-60517612 None:intergenic 50.0%
GGCTTGAGGATGTGACACAT+TGG - chr1_1:60517593-60517612 None:intergenic 50.0%
AGAGAGAAGAAAGAGGGAGG+AGG - chr1_1:60518261-60518280 None:intergenic 50.0%
CGTAGAGAGAAGAAAGAGGG+AGG - chr1_1:60518264-60518283 None:intergenic 50.0%
GAGATGAAGAAAGAGGGAGG+AGG - chr1_1:60518348-60518367 None:intergenic 50.0%
! AAGAGAATGACTGGCTGCGA+AGG + chr1_1:60519501-60519520 Msa0033180:intron 50.0%
AGGCAAGTGCACATGAGTAG+AGG - chr1_1:60519813-60519832 None:intergenic 50.0%
GGATGCAACTTTGCTGCATC+AGG + chr1_1:60523147-60523166 Msa0033180:CDS 50.0%
TCATCTATCCTACCGGCAAC+TGG + chr1_1:60523171-60523190 Msa0033180:CDS 50.0%
ACCTGAACCCCAAAGCTGAA+CGG - chr1_1:60523210-60523229 None:intergenic 50.0%
CGGGTTCTCGAATTACTTGC+AGG + chr1_1:60523255-60523274 Msa0033180:CDS 50.0%
TGACAGAGACTGTACGACAG+CGG + chr1_1:60523670-60523689 Msa0033180:intron 50.0%
! GCTGTGAGTGGTTTGCAATG+AGG - chr1_1:60523924-60523943 None:intergenic 50.0%
!! GACTGTCGTGAGTTTTGGTG+AGG - chr1_1:60523984-60524003 None:intergenic 50.0%
! GCGTGGCTTCACTCTCTTTT+GGG - chr1_1:60525063-60525082 None:intergenic 50.0%
GCATGCACGGATCTACATAG+TGG - chr1_1:60526092-60526111 None:intergenic 50.0%
GGCTACAACACAAGCATGCA+CGG - chr1_1:60526105-60526124 None:intergenic 50.0%
TGATTCTGTCCGTAAGGTGG+GGG - chr1_1:60526618-60526637 None:intergenic 50.0%
GTGATTCTGTCCGTAAGGTG+GGG - chr1_1:60526619-60526638 None:intergenic 50.0%
! CCGTCTGGGAGATTTTGTGA+TGG + chr1_1:60526648-60526667 Msa0033180:CDS 50.0%
CAACTTCTCTGGATGCGTGA+TGG - chr1_1:60527055-60527074 None:intergenic 50.0%
GGATGCAACTTTGCAGCATC+AGG + chr1_1:60527493-60527512 Msa0033180:CDS 50.0%
GGATCAGTCCGTTCAGCTTT+GGG + chr1_1:60527545-60527564 Msa0033180:CDS 50.0%
GATCAGTCCGTTCAGCTTTG+GGG + chr1_1:60527546-60527565 Msa0033180:CDS 50.0%
ACCTGAACCCCAAAGCTGAA+CGG - chr1_1:60523210-60523229 None:intergenic 50.0%
CGACAGAGACTGTATGACAG+CGG + chr1_1:60528020-60528039 Msa0033180:intron 50.0%
GACAGAGACTGTATGACAGC+GGG + chr1_1:60528021-60528040 Msa0033180:intron 50.0%
ACAGAGACTGTATGACAGCG+GGG + chr1_1:60528022-60528041 Msa0033180:intron 50.0%
! ACAGCGGGGCTAGGAATTTT+TGG + chr1_1:60528036-60528055 Msa0033180:intron 50.0%
AAATGAGCCAAGCATCCGAG+TGG - chr1_1:60528077-60528096 None:intergenic 50.0%
GGGACGGTAGTTACAGCAAA+AGG + chr1_1:60528477-60528496 Msa0033180:CDS 50.0%
! CTGGGATGGCGCTCATTTTA+CGG + chr1_1:60528527-60528546 Msa0033180:CDS 50.0%
CCATCGCAGAATCTCCCAGA+CGG - chr1_1:60517166-60517185 None:intergenic 55.0%
GGCTGAGAGGAAGGAGGAAT+CGG - chr1_1:60518375-60518394 None:intergenic 55.0%
TAAAGACGTGGGTGGCTGAG+AGG - chr1_1:60518388-60518407 None:intergenic 55.0%
! ACTTTTGCCCGTGCGTTGCA+CGG + chr1_1:60522928-60522947 Msa0033180:intron 55.0%
ATTTCCACCCGTGCAACGCA+CGG - chr1_1:60522939-60522958 None:intergenic 55.0%
GGATCAGCCCGTTCAGCTTT+GGG + chr1_1:60523199-60523218 Msa0033180:CDS 55.0%
GATCAGCCCGTTCAGCTTTG+GGG + chr1_1:60523200-60523219 Msa0033180:CDS 55.0%
CCTGAACCCCAAAGCTGAAC+GGG - chr1_1:60523209-60523228 None:intergenic 55.0%
GACAGAGACTGTACGACAGC+GGG + chr1_1:60523671-60523690 Msa0033180:intron 55.0%
ACAGAGACTGTACGACAGCG+GGG + chr1_1:60523672-60523691 Msa0033180:intron 55.0%
AAATGGGCCAAGCATCCGAG+TGG - chr1_1:60523727-60523746 None:intergenic 55.0%
! GGCGTGGCTTCACTCTCTTT+TGG - chr1_1:60525064-60525083 None:intergenic 55.0%
ATCTGATGCACTGTGGCTCG+TGG + chr1_1:60526169-60526188 Msa0033180:intron 55.0%
TCTGATGCACTGTGGCTCGT+GGG + chr1_1:60526170-60526189 Msa0033180:intron 55.0%
GGTGATTCAACCTCGGACAC+AGG + chr1_1:60526561-60526580 Msa0033180:CDS 55.0%
GATTCAACCTCGGACACAGG+TGG + chr1_1:60526564-60526583 Msa0033180:CDS 55.0%
GATTCTGTCCGTAAGGTGGG+GGG - chr1_1:60526617-60526636 None:intergenic 55.0%
! TGCGTGATGGAGTCGATTGC+TGG - chr1_1:60527042-60527061 None:intergenic 55.0%
TTCTTCCACCAACTGCAGCG+CGG + chr1_1:60527524-60527543 Msa0033180:CDS 55.0%
CGGATCAGTCCGTTCAGCTT+TGG + chr1_1:60527544-60527563 Msa0033180:CDS 55.0%
!! TCCGTTCAGCTTTGGGGTTC+AGG + chr1_1:60527552-60527571 Msa0033180:CDS 55.0%
TGTGAGTCCACTCGGATGCT+TGG + chr1_1:60528067-60528086 Msa0033180:intron 55.0%
! GGATGGCGCTCATTTTACGG+AGG + chr1_1:60528530-60528549 Msa0033180:CDS 55.0%
GGTGGACGTGTTGCAGCGTT+CGG + chr1_1:60517097-60517116 Msa0033180:CDS 60.0%
CCGTCTGGGAGATTCTGCGA+TGG + chr1_1:60517163-60517182 Msa0033180:CDS 60.0%
! CTTTTGCCCGTGCGTTGCAC+GGG + chr1_1:60522929-60522948 Msa0033180:intron 60.0%
TTTCCACCCGTGCAACGCAC+GGG - chr1_1:60522938-60522957 None:intergenic 60.0%
TCCTACCGGCAACTGGAGCA+CGG + chr1_1:60523178-60523197 Msa0033180:CDS 60.0%
CTGATCCGTGCTCCAGTTGC+CGG - chr1_1:60523186-60523205 None:intergenic 60.0%
CGGATCAGCCCGTTCAGCTT+TGG + chr1_1:60523198-60523217 Msa0033180:CDS 60.0%
!! CCCGTTCAGCTTTGGGGTTC+AGG + chr1_1:60523206-60523225 Msa0033180:CDS 60.0%
CACGAGTCCACTCGGATGCT+TGG + chr1_1:60523717-60523736 Msa0033180:CDS 60.0%
! GGACGGGGCTCATTTTACCG+AGG + chr1_1:60524181-60524200 Msa0033180:intron 60.0%
AACACGTCCACCTGTGTCCG+AGG - chr1_1:60526574-60526593 None:intergenic 60.0%
GGTGGACGTGTTGCAGCCTT+TGG + chr1_1:60526582-60526601 Msa0033180:CDS 60.0%
CTTCCACTCCCCCCACCTTA+CGG + chr1_1:60526606-60526625 Msa0033180:CDS 60.0%
GACTGTATGACAGCGGGGCT+AGG + chr1_1:60528027-60528046 Msa0033180:intron 60.0%
GTGGGTGGCTGAGAGGAAGG+AGG - chr1_1:60518381-60518400 None:intergenic 65.0%
GACGTGGGTGGCTGAGAGGA+AGG - chr1_1:60518384-60518403 None:intergenic 65.0%
TCCGTGCTCCAGTTGCCGGT+AGG - chr1_1:60523182-60523201 None:intergenic 65.0%
TGGGGGGAGTGGAAGGCCAA+AGG - chr1_1:60526601-60526620 None:intergenic 65.0%
CGTAAGGTGGGGGGAGTGGA+AGG - chr1_1:60526608-60526627 None:intergenic 65.0%
TGTCCGTAAGGTGGGGGGAG+TGG - chr1_1:60526612-60526631 None:intergenic 65.0%
CTGATCCGCGCTGCAGTTGG+TGG - chr1_1:60527532-60527551 None:intergenic 65.0%
GGACTGATCCGCGCTGCAGT+TGG - chr1_1:60527535-60527554 None:intergenic 65.0%
TTGCCCGTGCGTTGCACGGG+TGG + chr1_1:60522932-60522951 Msa0033180:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 60516974 60528632 60516974 ID=Msa0033180;Name=Msa0033180
chr1_1 mRNA 60516974 60528632 60516974 ID=Msa0033180-mRNA-1;Parent=Msa0033180;Name=Msa0033180-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0.5|0.22|1|0.75|0.77|9|0|588
chr1_1 exon 60516974 60517208 60516974 ID=Msa0033180-mRNA-1:exon:18959;Parent=Msa0033180-mRNA-1
chr1_1 exon 60523079 60523276 60523079 ID=Msa0033180-mRNA-1:exon:18960;Parent=Msa0033180-mRNA-1
chr1_1 exon 60523384 60523550 60523384 ID=Msa0033180-mRNA-1:exon:18961;Parent=Msa0033180-mRNA-1
chr1_1 exon 60523676 60523853 60523676 ID=Msa0033180-mRNA-1:exon:18962;Parent=Msa0033180-mRNA-1
chr1_1 exon 60526490 60526693 60526490 ID=Msa0033180-mRNA-1:exon:18963;Parent=Msa0033180-mRNA-1
chr1_1 exon 60527425 60527622 60527425 ID=Msa0033180-mRNA-1:exon:18964;Parent=Msa0033180-mRNA-1
chr1_1 exon 60527733 60527899 60527733 ID=Msa0033180-mRNA-1:exon:18965;Parent=Msa0033180-mRNA-1
chr1_1 exon 60528128 60528296 60528128 ID=Msa0033180-mRNA-1:exon:18966;Parent=Msa0033180-mRNA-1
chr1_1 exon 60528382 60528632 60528382 ID=Msa0033180-mRNA-1:exon:18967;Parent=Msa0033180-mRNA-1
chr1_1 CDS 60516974 60517208 60516974 ID=Msa0033180-mRNA-1:cds;Parent=Msa0033180-mRNA-1
chr1_1 CDS 60523079 60523276 60523079 ID=Msa0033180-mRNA-1:cds;Parent=Msa0033180-mRNA-1
chr1_1 CDS 60523384 60523550 60523384 ID=Msa0033180-mRNA-1:cds;Parent=Msa0033180-mRNA-1
chr1_1 CDS 60523676 60523853 60523676 ID=Msa0033180-mRNA-1:cds;Parent=Msa0033180-mRNA-1
chr1_1 CDS 60526490 60526693 60526490 ID=Msa0033180-mRNA-1:cds;Parent=Msa0033180-mRNA-1
chr1_1 CDS 60527425 60527622 60527425 ID=Msa0033180-mRNA-1:cds;Parent=Msa0033180-mRNA-1
chr1_1 CDS 60527733 60527899 60527733 ID=Msa0033180-mRNA-1:cds;Parent=Msa0033180-mRNA-1
chr1_1 CDS 60528128 60528296 60528128 ID=Msa0033180-mRNA-1:cds;Parent=Msa0033180-mRNA-1
chr1_1 CDS 60528382 60528632 60528382 ID=Msa0033180-mRNA-1:cds;Parent=Msa0033180-mRNA-1
Gene Sequence

>Msa0033180

ATGGATTCTAAGTATGTTGCTTTACGAGTTGTGCTATTTTGCATGTGTTTGGTTGTGGCAAATGCTGTTGTTGACTTCAGTTACCCGGCAGTTTTCAACTTTGGTGATTCAAACTCAGACACAGGTGGACGTGTTGCAGCGTTCGGCAATCAACTGCCCCCACCTTACGGACAAAATCACTTCAAAACTCCGTCTGGGAGATTCTGCGATGGTCGTCTCATGCTTGACTTCTTAATGAATGCAACGGACTTGCCATTCTTAAATGCCTATATGGATTCATTTGGTTTACCGAATTTCCATCAAGGATGCAACTTTGCTGCATCAGGTTCATCTATCCTACCGGCAACTGGAGCACGGATCAGCCCGTTCAGCTTTGGGGTTCAGGTATCTCAGTTTCTGCTATTCAAAGCTCGGGTTCTCGAATTACTTGCAGGCAAGAAATTTGACGAGTATGTCCCAGCCGAAGATTATTTCGAGAAGGGGTTATACACTTTTGACATTGGTCAGAACGATTTAACCATCGCATTTTATTCACAAGACTTGGACCAAATAATTGCCTCAATTCCAACAATTCTATTGGAATTTGAAACTGGAATAAAGAGACTGTACGACAGCGGGGCTAGAAATTTTTGGATACATAACACGAGTCCACTCGGATGCTTGGCCCATTTTATTGCCCAATTTGGCACTGACCCATCAAAGCTTGATGAACTAGGATGTCTTCAAGAACACAACCAAGCTTCTAAAGCCTTTAATCTACATCTGCAAGATTTCTGCATTGTGTTCTTTTGCATATCTTTGCCTGTAGCAAATTCTGTTGACTTCAGTTATCCAACAGCTTTCAACTTTGGTGATTCAACCTCGGACACAGGTGGACGTGTTGCAGCCTTTGGCCTTCCACTCCCCCCACCTTACGGACAGAATCACTTCAAAACTCCGTCTGGGAGATTTTGTGATGGTCGTCTCATACTTGACTTCTTAATGAATGCAACGGACTTGCCATTCTTAAATGCCTATTTGGATTCATTTGGCTTGCCAAATTTCCATCATGGATGCAACTTTGCAGCATCAGGTTCATCTATTCTTCCACCAACTGCAGCGCGGATCAGTCCGTTCAGCTTTGGGGTTCAGGTATCTCAATTTCTGCTATTCAAAGCTCGGGTTCTCAAATTACTTGCAGGCCAAAAAATTTACGAGTATGACCCGGCCAAAGATTATTTCGAGAAGGGGTTATACATTTTTGAAATAGGTCGGAATGATCTTACTATCGCGTTTTATTCACAAGACTTGGACCAGATAATTGCCTCAATTCCAACAATTCTATTGGAATTTGAAACTGGAATAAAGCTTGATGAACTAGGATGCCTTCGTGAACACAACTTAGCTGCTAAATCTTTTAATCTATATCTACAAGATTTCTGTAGTAAATTGCATGGCCAGTATCCAGATGTAAATGTTACATATGTTGATATCTTTACCATAAAACTAGACCTCATTGCAAATTACTCACAACATGGGTTTGAACAGCCAATTATGGCTTGTTGTGGATATGGAGGTCCGCCGTTGAACTATGATAGTCGCGTTTCTTGTGGAGAAACAAAGGTCTTAAATGGGACGGTAGTTACAGCAAAAGGTTGCAATGATAGTAGTGTGTATGTAAGCTGGGATGGCGCTCATTTTACGGAGGCCACAAATCGATATGTTGCATCACAAATTCTCACTGGAAATTACATTAACACTCATTTGCCAGAAAAGATGTCATTCTAA
Protein sequence

>Msa0033180

MDSKYVALRVVLFCMCLVVANAVVDFSYPAVFNFGDSNSDTGGRVAAFGNQLPPPYGQNHFKTPSGRFCDGRLMLDFLMNATDLPFLNAYMDSFGLPNFHQGCNFAASGSSILPATGARISPFSFGVQVSQFLLFKARVLELLAGKKFDEYVPAEDYFEKGLYTFDIGQNDLTIAFYSQDLDQIIASIPTILLEFETGIKRLYDSGARNFWIHNTSPLGCLAHFIAQFGTDPSKLDELGCLQEHNQASKAFNLHLQDFCIVFFCISLPVANSVDFSYPTAFNFGDSTSDTGGRVAAFGLPLPPPYGQNHFKTPSGRFCDGRLILDFLMNATDLPFLNAYLDSFGLPNFHHGCNFAASGSSILPPTAARISPFSFGVQVSQFLLFKARVLKLLAGQKIYEYDPAKDYFEKGLYIFEIGRNDLTIAFYSQDLDQIIASIPTILLEFETGIKLDELGCLREHNLAAKSFNLYLQDFCSKLHGQYPDVNVTYVDIFTIKLDLIANYSQHGFEQPIMACCGYGGPPLNYDSRVSCGETKVLNGTVVTAKGCNDSSVYVSWDGAHFTEATNRYVASQILTGNYINTHLPEKMSF*