AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1022490


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1022490 MtrunA17_Chr7g0239111 87.258 361 12 2 1 327 1 361 0.0 637
Msa1022490 MtrunA17_Chr7g0239121 73.889 360 59 2 5 329 1 360 0.0 543
Msa1022490 MtrunA17_Chr7g0239101 70.588 357 71 2 1 323 1 357 0.0 525
Msa1022490 MtrunA17_Chr7g0239821 60.056 358 109 2 1 324 10 367 1.49e-164 463
Msa1022490 MtrunA17_Chr7g0232161 67.347 294 57 3 1 255 1 294 2.74e-138 394
Msa1022490 MtrunA17_Chr7g0239071 66.783 286 60 3 78 329 24 308 2.93e-133 381
Msa1022490 MtrunA17_Chr7g0239091 51.977 354 126 4 6 328 117 457 6.80e-122 358
Msa1022490 MtrunA17_Chr2g0296371 36.416 346 179 6 17 323 14 357 4.40e-79 245
Msa1022490 MtrunA17_Chr5g0421011 35.429 350 185 4 11 323 4 349 1.97e-78 243
Msa1022490 MtrunA17_Chr5g0423201 36.207 348 186 4 12 324 5 351 1.08e-76 239
Msa1022490 MtrunA17_Chr5g0423221 35.393 356 194 4 3 323 20 374 1.16e-76 239
Msa1022490 MtrunA17_Chr8g0365241 36.232 345 184 4 14 323 17 360 7.13e-76 237
Msa1022490 MtrunA17_Chr2g0314401 34.104 346 189 5 14 322 11 354 7.24e-76 237
Msa1022490 MtrunA17_Chr5g0421041 34.294 347 191 4 11 323 4 347 7.34e-75 234
Msa1022490 MtrunA17_Chr8g0375671 34.483 348 189 4 14 323 12 358 1.68e-74 233
Msa1022490 MtrunA17_Chr5g0421101 34.006 347 194 3 14 326 7 352 2.06e-74 233
Msa1022490 MtrunA17_Chr5g0420951 34.493 345 191 3 14 323 12 356 1.79e-73 231
Msa1022490 MtrunA17_Chr5g0420941 34.582 347 192 3 14 326 5 350 2.93e-72 227
Msa1022490 MtrunA17_Chr5g0423191 34.582 347 192 4 11 323 4 349 4.11e-72 227
Msa1022490 MtrunA17_Chr5g0420981 34.104 346 193 3 14 324 12 357 6.57e-72 226
Msa1022490 MtrunA17_Chr5g0423251 33.621 348 196 4 11 324 4 350 9.22e-72 226
Msa1022490 MtrunA17_Chr2g0314391 35.159 347 186 5 14 323 30 374 4.28e-70 223
Msa1022490 MtrunA17_Chr8g0375601 33.994 353 182 5 16 323 7 353 8.28e-70 222
Msa1022490 MtrunA17_Chr5g0420901 32.951 349 193 4 17 328 9 353 1.44e-68 218
Msa1022490 MtrunA17_Chr8g0375571 32.853 347 194 4 14 322 5 350 2.80e-66 212
Msa1022490 MtrunA17_Chr2g0314381 34.770 348 187 6 14 323 36 381 2.92e-66 213
Msa1022490 MtrunA17_Chr5g0421091 32.759 348 198 4 14 326 5 351 5.33e-66 211
Msa1022490 MtrunA17_Chr3g0087031 32.849 344 190 6 7 312 11 351 9.80e-65 208
Msa1022490 MtrunA17_Chr5g0423211 32.558 344 193 5 17 323 10 351 2.10e-64 207
Msa1022490 MtrunA17_Chr3g0113641 34.251 327 175 4 16 302 11 337 9.15e-62 201
Msa1022490 MtrunA17_Chr5g0437181 34.557 327 174 4 16 302 10 336 1.71e-61 200
Msa1022490 MtrunA17_Chr8g0375701 32.286 350 201 5 8 322 7 355 1.06e-59 195
Msa1022490 MtrunA17_Chr7g0242551 34.639 332 172 7 16 302 11 342 1.73e-59 195
Msa1022490 MtrunA17_Chr4g0006371 36.086 327 159 6 18 302 32 350 1.36e-58 192
Msa1022490 MtrunA17_Chr1g0162191 32.081 346 186 7 11 316 8 344 3.31e-58 191
Msa1022490 MtrunA17_Chr8g0375681 33.333 273 148 2 86 324 15 287 6.13e-58 189
Msa1022490 MtrunA17_Chr8g0370721 33.236 343 188 7 19 322 14 354 2.59e-57 189
Msa1022490 MtrunA17_Chr3g0145171 34.875 281 146 4 55 298 52 332 4.25e-56 186
Msa1022490 MtrunA17_Chr5g0424201 33.123 317 171 6 31 309 20 333 1.89e-53 178
Msa1022490 MtrunA17_Chr8g0370711 32.653 343 190 7 19 322 14 354 1.65e-52 176
Msa1022490 MtrunA17_Chr5g0398291 30.682 352 191 9 20 321 8 356 3.99e-51 173
Msa1022490 MtrunA17_Chr4g0064781 34.982 283 146 5 55 301 50 330 6.96e-51 172
Msa1022490 MtrunA17_Chr2g0314371 29.747 316 162 7 14 271 11 324 8.51e-51 171
Msa1022490 MtrunA17_Chr5g0424211 33.225 307 162 7 25 291 12 315 1.47e-49 168
Msa1022490 MtrunA17_Chr4g0050031 32.335 334 184 8 30 322 34 366 3.11e-49 168
Msa1022490 MtrunA17_Chr3g0109041 30.814 344 190 10 20 319 10 349 3.21e-49 168
Msa1022490 MtrunA17_Chr1g0179801 31.844 358 192 10 19 328 26 379 5.37e-49 168
Msa1022490 MtrunA17_Chr5g0426891 32.653 343 189 10 19 322 3 342 2.45e-48 165
Msa1022490 MtrunA17_Chr5g0420721 33.468 248 131 3 110 323 4 251 3.04e-48 162
Msa1022490 MtrunA17_Chr3g0102041 30.952 336 188 9 16 312 3 333 2.52e-47 163
Msa1022490 MtrunA17_Chr3g0128001 31.231 333 182 6 30 328 14 333 4.19e-47 162
Msa1022490 MtrunA17_Chr7g0239081 79.787 94 14 1 1 89 1 94 4.84e-47 154
Msa1022490 MtrunA17_Chr4g0045451 30.973 339 177 7 30 314 3 338 5.91e-47 162
Msa1022490 MtrunA17_Chr7g0265221 30.548 347 184 9 30 322 37 380 1.18e-45 159
Msa1022490 MtrunA17_Chr3g0114861 31.118 331 171 8 17 302 3 321 2.64e-45 157
Msa1022490 MtrunA17_Chr8g0371931 31.707 328 182 8 33 321 18 342 5.74e-45 157
Msa1022490 MtrunA17_Chr3g0145181 31.790 324 174 9 19 298 12 332 1.07e-44 156
Msa1022490 MtrunA17_Chr1g0162351 31.085 341 167 10 47 325 57 391 2.57e-44 156
Msa1022490 MtrunA17_Chr5g0412681 33.333 291 150 6 51 303 29 313 4.77e-44 154
Msa1022490 MtrunA17_Chr5g0412651 31.563 339 189 8 25 322 9 345 6.11e-44 154
Msa1022490 MtrunA17_Chr8g0371921 30.357 336 190 9 16 312 3 333 7.33e-44 154
Msa1022490 MtrunA17_Chr5g0412671 31.420 331 184 8 25 314 9 337 1.15e-43 153
Msa1022490 MtrunA17_Chr4g0045471 30.931 333 168 10 30 305 3 330 2.78e-43 152
Msa1022490 MtrunA17_Chr4g0045441 32.362 309 156 7 56 314 33 338 3.57e-43 152
Msa1022490 MtrunA17_Chr5g0405411 33.218 289 152 6 33 282 18 304 4.73e-43 152
Msa1022490 MtrunA17_Chr8g0345831 28.529 340 206 6 18 322 6 343 5.60e-43 151
Msa1022490 MtrunA17_Chr1g0162321 30.499 341 169 10 47 325 57 391 6.59e-43 152
Msa1022490 MtrunA17_Chr7g0265351 32.407 324 165 11 42 322 25 337 9.39e-43 150
Msa1022490 MtrunA17_Chr4g0045431 31.210 314 161 6 55 314 26 338 4.36e-42 149
Msa1022490 MtrunA17_Chr3g0125201 32.526 289 151 9 55 303 3 287 5.49e-42 147
Msa1022490 MtrunA17_Chr1g0162361 29.841 315 162 8 42 302 9 318 3.43e-41 146
Msa1022490 MtrunA17_Chr1g0184151 31.447 318 173 9 31 309 15 326 4.94e-41 146
Msa1022490 MtrunA17_Chr3g0145201 32.867 286 148 7 55 298 684 967 6.27e-41 152
Msa1022490 MtrunA17_Chr4g0045411 31.353 303 154 8 51 302 26 325 6.47e-41 146
Msa1022490 MtrunA17_Chr1g0184161 30.031 323 181 9 26 309 10 326 3.30e-40 144
Msa1022490 MtrunA17_Chr3g0093761 29.738 343 196 11 19 322 17 353 6.10e-40 143
Msa1022490 MtrunA17_Chr3g0126741 28.000 325 195 7 31 318 35 357 5.40e-39 141
Msa1022490 MtrunA17_Chr3g0093751 29.942 344 195 12 19 322 17 354 1.19e-38 140
Msa1022490 MtrunA17_Chr3g0093741 29.942 344 195 12 19 322 17 354 1.46e-38 140
Msa1022490 MtrunA17_Chr2g0311921 29.052 327 189 8 19 305 18 341 1.98e-38 139
Msa1022490 MtrunA17_Chr3g0114871 35.246 244 132 7 20 242 7 245 2.90e-38 137
Msa1022490 MtrunA17_Chr6g0455481 29.452 292 161 8 52 304 39 324 4.33e-38 138
Msa1022490 MtrunA17_Chr2g0332191 26.176 340 192 8 17 303 1 334 2.25e-37 137
Msa1022490 MtrunA17_Chr3g0121141 30.068 296 165 6 55 314 4 293 3.16e-37 135
Msa1022490 MtrunA17_Chr1g0204181 28.319 339 193 8 29 321 36 370 3.82e-37 136
Msa1022490 MtrunA17_Chr8g0375641 44.056 143 75 2 14 152 12 153 5.65e-37 130
Msa1022490 MtrunA17_Chr1g0184111 28.571 322 184 9 31 312 14 329 5.88e-37 135
Msa1022490 MtrunA17_Chr2g0311691 28.228 333 192 8 19 307 26 355 1.53e-36 135
Msa1022490 MtrunA17_Chr1g0184121 27.900 319 184 9 31 309 14 326 3.64e-36 133
Msa1022490 MtrunA17_Chr5g0439011 29.412 289 160 6 55 304 5 288 1.02e-35 131
Msa1022490 MtrunA17_Chr4g0066121 29.293 297 166 9 55 310 60 353 1.17e-35 132
Msa1022490 MtrunA17_Chr2g0311631 27.907 344 205 9 19 322 21 361 1.66e-35 132
Msa1022490 MtrunA17_Chr2g0311681 27.492 331 197 7 19 307 26 355 3.16e-35 131
Msa1022490 MtrunA17_Chr2g0311761 26.426 333 204 7 19 312 32 362 6.46e-35 130
Msa1022490 MtrunA17_Chr2g0289341 27.609 297 173 6 55 314 4 295 7.17e-35 129
Msa1022490 MtrunA17_Chr8g0336631 29.693 293 160 10 52 302 57 345 7.74e-35 130
Msa1022490 MtrunA17_Chr8g0375661 40.260 154 85 3 5 152 1 153 1.03e-34 124
Msa1022490 MtrunA17_Chr1g0191201 27.405 343 190 7 18 306 11 348 1.21e-34 130
Msa1022490 MtrunA17_Chr2g0311831 27.327 333 200 8 19 312 32 361 1.39e-34 129
Msa1022490 MtrunA17_Chr8g0336781 27.811 338 191 11 19 312 62 390 1.78e-34 130
Msa1022490 MtrunA17_Chr7g0220011 29.487 312 175 8 31 304 16 320 2.02e-34 128
Msa1022490 MtrunA17_Chr8g0336851 27.003 337 194 10 19 312 27 354 2.54e-34 129
Msa1022490 MtrunA17_Chr8g0348081 27.829 327 190 11 19 305 27 347 3.03e-34 128
Msa1022490 MtrunA17_Chr8g0354261 27.726 321 187 8 19 297 32 349 4.05e-34 129
Msa1022490 MtrunA17_Chr2g0311741 31.119 286 155 9 55 302 27 308 4.56e-34 127
Msa1022490 MtrunA17_Chr8g0336751 28.136 295 174 6 55 312 94 387 5.91e-34 128
Msa1022490 MtrunA17_Chr4g0045461 29.217 332 173 8 42 314 9 337 6.25e-34 128
Msa1022490 MtrunA17_Chr2g0319491 28.664 307 168 10 54 322 32 325 1.18e-33 126
Msa1022490 MtrunA17_Chr8g0354241 26.648 349 207 9 19 323 32 375 2.30e-33 126
Msa1022490 MtrunA17_Chr1g0184241 26.498 317 200 6 19 303 33 348 4.95e-33 125
Msa1022490 MtrunA17_Chr6g0474391 26.688 311 179 7 29 294 41 347 5.88e-33 125
Msa1022490 MtrunA17_Chr1g0187821 27.609 297 173 7 55 312 67 360 6.47e-33 125
Msa1022490 MtrunA17_Chr1g0184101 28.707 317 184 9 26 304 9 321 9.77e-33 124
Msa1022490 MtrunA17_Chr1g0161041 28.614 339 203 9 19 321 59 394 1.07e-32 125
Msa1022490 MtrunA17_Chr8g0336761 29.252 294 159 10 52 302 57 344 1.50e-32 124
Msa1022490 MtrunA17_Chr8g0351101 27.429 350 195 10 10 308 9 350 2.75e-32 123
Msa1022490 MtrunA17_Chr1g0187831 26.230 305 186 6 49 315 64 367 1.05e-31 122
Msa1022490 MtrunA17_Chr2g0311701 26.846 298 176 6 55 311 69 365 1.45e-31 122
Msa1022490 MtrunA17_Chr2g0311711 25.581 344 202 10 4 305 23 354 1.92e-31 121
Msa1022490 MtrunA17_Chr7g0250511 27.157 313 181 8 51 322 45 351 2.32e-31 120
Msa1022490 MtrunA17_Chr7g0225881 27.586 290 164 9 55 303 67 351 2.84e-31 120
Msa1022490 MtrunA17_Chr7g0235951 27.419 310 180 10 55 322 67 373 3.00e-31 120
Msa1022490 MtrunA17_Chr3g0130391 25.559 313 182 6 56 323 67 373 6.72e-31 120
Msa1022490 MtrunA17_Chr1g0187811 26.263 297 179 6 55 312 188 483 8.41e-31 121
Msa1022490 MtrunA17_Chr6g0472861 26.970 330 192 10 19 302 27 353 9.71e-31 119
Msa1022490 MtrunA17_Chr2g0311861 26.625 323 181 7 19 305 28 330 1.47e-30 118
Msa1022490 MtrunA17_Chr3g0125421 27.900 319 180 7 30 303 15 328 2.55e-30 118
Msa1022490 MtrunA17_Chr7g0266651 25.378 331 207 8 31 323 35 363 8.84e-30 116
Msa1022490 MtrunA17_Chr7g0220001 27.273 319 185 8 30 309 17 327 2.61e-29 114
Msa1022490 MtrunA17_Chr6g0488511 29.492 295 151 8 55 301 3 288 2.61e-29 114
Msa1022490 MtrunA17_Chr8g0336861 26.627 338 191 11 19 310 27 353 3.90e-29 115
Msa1022490 MtrunA17_Chr1g0161081 27.679 336 204 9 19 318 36 368 7.24e-29 114
Msa1022490 MtrunA17_Chr5g0420881 35.333 150 78 1 198 328 1 150 1.84e-28 107
Msa1022490 MtrunA17_Chr8g0335411 24.928 345 215 11 19 322 32 373 3.45e-28 112
Msa1022490 MtrunA17_Chr8g0375591 40.157 127 72 1 14 136 5 131 4.59e-28 105
Msa1022490 MtrunA17_Chr1g0167961 26.364 330 200 9 19 309 34 359 5.25e-28 112
Msa1022490 MtrunA17_Chr1g0167911 27.778 288 169 7 19 271 19 302 1.51e-27 110
Msa1022490 MtrunA17_Chr8g0358941 25.776 322 182 10 51 324 23 335 1.77e-27 110
Msa1022490 MtrunA17_Chr1g0161111 27.381 336 205 11 19 318 95 427 3.87e-27 110
Msa1022490 MtrunA17_Chr7g0247991 27.660 329 192 12 19 305 32 356 1.50e-26 108
Msa1022490 MtrunA17_Chr5g0420891 36.232 138 81 2 17 151 9 142 2.20e-26 102
Msa1022490 MtrunA17_Chr4g0055591 24.739 287 177 6 53 303 59 342 6.48e-26 105
Msa1022490 MtrunA17_Chr4g0053251 26.861 309 166 10 53 303 6 312 4.71e-25 103
Msa1022490 MtrunA17_Chr2g0285931 25.753 299 166 10 51 302 24 313 6.95e-25 102
Msa1022490 MtrunA17_Chr8g0364471 23.494 332 210 9 19 309 32 360 8.41e-25 103
Msa1022490 MtrunA17_Chr8g0384461 24.478 335 195 9 30 318 25 347 1.04e-24 102
Msa1022490 MtrunA17_Chr2g0313111 26.948 308 169 14 35 302 14 305 2.93e-24 100
Msa1022490 MtrunA17_Chr4g0068891 26.689 296 173 10 55 311 20 310 5.94e-24 100
Msa1022490 MtrunA17_Chr1g0194321 27.575 301 158 11 55 302 20 313 9.35e-24 99.8
Msa1022490 MtrunA17_Chr4g0066991 24.917 301 165 10 55 315 67 346 1.89e-23 99.0
Msa1022490 MtrunA17_Chr1g0148771 27.170 265 152 7 52 281 60 318 1.99e-23 99.0
Msa1022490 MtrunA17_Chr1g0170631 35.751 193 98 5 153 322 3 192 2.13e-23 95.5
Msa1022490 MtrunA17_Chr1g0167951 26.190 294 178 6 55 311 53 344 1.17e-22 97.1
Msa1022490 MtrunA17_Chr3g0092531 28.520 277 155 10 74 316 30 297 2.61e-22 95.5
Msa1022490 MtrunA17_Chr7g0236011 24.749 299 182 10 55 312 67 363 4.59e-22 95.5
Msa1022490 MtrunA17_Chr4g0055911 28.713 303 161 11 55 308 9 305 1.63e-21 93.2
Msa1022490 MtrunA17_Chr8g0384481 22.903 310 185 9 54 315 58 361 1.90e-21 94.0
Msa1022490 MtrunA17_Chr8g0348951 27.692 325 171 13 54 326 9 321 2.00e-21 92.8
Msa1022490 MtrunA17_Chr7g0235981 23.864 264 158 6 88 312 58 317 4.30e-21 92.0
Msa1022490 MtrunA17_Chr5g0407731 24.503 302 187 8 50 317 28 322 2.07e-20 90.1
Msa1022490 MtrunA17_Chr8g0389941 29.464 336 157 17 50 319 22 343 2.33e-20 90.5
Msa1022490 MtrunA17_Chr3g0126761 31.395 172 95 4 153 303 44 213 2.64e-20 88.2
Msa1022490 MtrunA17_Chr4g0064771 26.446 242 119 5 96 317 6 208 5.17e-20 86.7
Msa1022490 MtrunA17_Chr5g0407781 24.913 289 178 8 55 311 5 286 9.69e-20 87.8
Msa1022490 MtrunA17_Chr4g0075471 34.848 132 63 3 195 304 26 156 1.09e-19 84.7
Msa1022490 MtrunA17_Chr4g0011311 27.273 209 126 7 55 243 67 269 3.22e-19 86.7
Msa1022490 MtrunA17_Chr3g0138351 25.733 307 177 10 54 313 6 308 4.04e-19 86.3
Msa1022490 MtrunA17_Chr4g0009561 25.157 318 186 12 53 322 5 318 6.66e-19 85.9
Msa1022490 MtrunA17_Chr5g0394071 31.548 168 89 3 154 302 3 163 1.03e-18 82.4
Msa1022490 MtrunA17_Chr4g0052251 25.177 282 161 10 76 311 45 322 1.17e-18 85.5
Msa1022490 MtrunA17_Chr8g0336831 26.126 222 140 6 19 221 27 243 4.21e-18 82.4
Msa1022490 MtrunA17_Chr7g0247741 26.756 299 159 12 53 304 9 294 1.41e-17 82.0
Msa1022490 MtrunA17_Chr4g0009541 26.403 303 168 14 51 305 3 298 4.64e-17 80.5
Msa1022490 MtrunA17_Chr7g0233661 35.714 126 55 3 196 302 19 137 3.03e-16 75.1
Msa1022490 MtrunA17_Chr6g0486831 26.543 324 174 13 53 319 16 332 3.05e-16 78.6
Msa1022490 MtrunA17_Chr4g0004061 26.198 313 170 11 50 313 4 304 1.93e-15 75.9
Msa1022490 MtrunA17_Chr7g0256741 26.230 305 176 13 51 312 6 304 3.50e-15 75.1
Msa1022490 MtrunA17_Chr4g0037611 30.114 176 90 7 162 316 3 166 4.18e-15 72.4
Msa1022490 MtrunA17_Chr8g0375581 42.857 70 40 0 174 243 1 70 1.47e-14 68.2
Msa1022490 MtrunA17_Chr4g0004071 26.885 305 173 13 52 313 6 303 2.00e-14 72.8
Msa1022490 MtrunA17_Chr8g0336801 29.927 137 73 3 198 312 11 146 1.32e-13 67.8
Msa1022490 MtrunA17_Chr4g0037601 36.082 97 56 4 53 145 38 132 6.44e-13 65.9
Msa1022490 MtrunA17_Chr8g0336871 28.485 165 97 5 166 312 3 164 2.11e-12 64.7
Msa1022490 MtrunA17_Chr1g0158021 26.991 226 139 8 46 252 41 259 4.15e-12 65.5
Msa1022490 MtrunA17_Chr8g0362741 24.390 205 122 8 55 243 67 254 1.03e-11 64.7
Msa1022490 MtrunA17_Chr1g0148781 23.588 301 176 11 55 305 8 304 1.05e-11 65.1
Msa1022490 MtrunA17_Chr1g0161101 39.706 136 63 7 152 273 361 491 2.54e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1022490 AT3G21420.1 36.963 349 177 6 17 322 14 362 1.90e-80 249
Msa1022490 AT1G78550.1 34.104 346 191 4 14 322 11 356 1.45e-72 229
Msa1022490 AT1G17020.1 35.345 348 186 5 14 322 11 358 2.57e-72 228
Msa1022490 AT4G25300.1 34.006 347 191 5 14 322 10 356 4.91e-71 224
Msa1022490 AT1G17010.1 35.632 348 185 6 14 322 11 358 1.83e-70 223
Msa1022490 AT2G38240.1 36.923 325 166 5 16 302 8 331 2.16e-66 213
Msa1022490 AT4G25310.1 34.483 348 185 7 14 322 10 353 4.56e-64 207
Msa1022490 AT3G11180.1 33.945 327 176 5 16 302 52 378 1.72e-63 206
Msa1022490 AT3G11180.2 33.945 327 176 5 16 302 52 378 2.67e-63 206
Msa1022490 AT5G05600.1 31.487 343 195 5 16 318 23 365 2.01e-59 195
Msa1022490 AT5G20400.1 34.472 322 166 8 19 298 8 326 3.84e-56 186
Msa1022490 AT1G49390.1 34.663 326 167 9 19 301 8 330 6.70e-56 185
Msa1022490 AT5G20550.1 36.552 290 144 5 54 303 44 333 4.31e-55 183
Msa1022490 AT3G55970.1 33.807 352 186 8 16 321 10 360 6.43e-54 181
Msa1022490 AT1G78550.2 31.022 274 155 2 83 322 5 278 2.70e-53 176
Msa1022490 AT5G54000.2 33.437 323 169 7 19 298 8 327 3.24e-52 176
Msa1022490 AT5G24530.1 32.710 321 176 6 31 314 15 332 5.79e-49 167
Msa1022490 AT4G22880.1 29.738 343 185 9 17 307 4 342 4.94e-48 165
Msa1022490 AT4G22880.2 29.738 343 185 9 17 307 4 342 4.94e-48 165
Msa1022490 AT4G22880.3 29.738 343 185 9 17 307 4 342 4.94e-48 165
Msa1022490 AT2G36690.2 33.429 350 181 12 19 322 20 363 9.54e-48 164
Msa1022490 AT2G36690.1 33.429 350 181 12 19 322 20 363 9.54e-48 164
Msa1022490 AT1G49390.2 35.060 251 127 4 87 301 1 251 5.85e-47 160
Msa1022490 AT4G16330.2 30.841 321 174 9 38 319 50 361 6.17e-47 162
Msa1022490 AT3G19010.1 31.661 319 164 8 35 302 8 323 7.86e-47 162
Msa1022490 AT3G19010.4 31.661 319 164 8 35 302 8 323 7.86e-47 162
Msa1022490 AT5G08640.2 30.915 317 178 7 31 309 19 332 1.26e-46 161
Msa1022490 AT5G08640.1 30.915 317 178 7 31 309 19 332 1.26e-46 161
Msa1022490 AT1G55290.1 30.233 344 193 12 19 322 25 361 4.24e-46 160
Msa1022490 AT5G54000.1 34.008 247 128 3 87 298 1 247 6.79e-45 154
Msa1022490 AT4G25310.2 30.836 347 171 9 14 322 10 325 1.25e-44 155
Msa1022490 AT3G13610.1 30.117 342 195 10 19 322 26 361 9.46e-44 154
Msa1022490 AT3G51240.1 30.488 328 186 9 33 321 17 341 1.39e-43 154
Msa1022490 AT5G05600.2 32.932 249 146 4 16 243 23 271 2.14e-43 151
Msa1022490 AT4G10500.1 28.875 329 197 6 29 321 18 345 5.34e-43 152
Msa1022490 AT4G10490.1 30.868 311 177 6 30 303 17 326 2.07e-42 150
Msa1022490 AT3G19010.3 31.615 291 171 7 35 302 8 293 8.19e-41 145
Msa1022490 AT5G63590.1 35.314 303 148 11 41 302 2 297 1.15e-40 144
Msa1022490 AT1G77330.1 30.986 284 161 5 55 303 3 286 2.71e-39 141
Msa1022490 AT3G55970.2 35.686 255 136 7 16 243 10 263 6.89e-39 140
Msa1022490 AT3G19000.1 30.492 305 157 7 51 303 28 329 3.59e-38 139
Msa1022490 AT2G30830.1 28.319 339 188 11 19 312 20 348 1.27e-37 138
Msa1022490 AT5G63600.1 30.952 294 154 11 54 308 32 315 1.85e-37 136
Msa1022490 AT5G63600.2 30.847 295 154 11 54 308 32 316 2.49e-37 136
Msa1022490 AT1G12010.1 28.239 301 173 6 50 314 2 295 5.31e-37 135
Msa1022490 AT1G62380.1 27.875 287 164 7 54 304 6 285 6.94e-36 132
Msa1022490 AT3G60290.1 26.513 347 207 9 19 323 15 355 1.67e-35 132
Msa1022490 AT5G07480.1 30.218 321 171 10 52 324 41 356 2.08e-35 132
Msa1022490 AT1G44090.1 29.773 309 168 8 54 318 62 365 2.57e-35 132
Msa1022490 AT4G25420.1 24.855 346 206 6 13 308 16 357 6.72e-35 131
Msa1022490 AT1G05010.1 30.137 292 156 8 55 304 4 289 6.95e-35 129
Msa1022490 AT2G44800.1 29.206 315 181 8 30 305 26 337 2.38e-34 129
Msa1022490 AT4G16330.1 31.538 260 134 7 99 319 1 255 3.95e-34 126
Msa1022490 AT3G12900.1 27.811 338 206 9 19 321 21 355 1.41e-33 127
Msa1022490 AT4G21200.1 33.205 259 139 6 54 280 41 297 1.95e-33 126
Msa1022490 AT1G15550.1 28.475 295 166 8 49 304 51 339 2.43e-33 126
Msa1022490 AT1G04380.1 27.124 306 180 8 49 316 39 339 1.17e-32 124
Msa1022490 AT5G59530.1 28.383 303 176 10 54 316 57 358 2.09e-32 124
Msa1022490 AT1G50960.1 31.058 293 149 10 54 306 39 318 3.02e-32 123
Msa1022490 AT2G30840.1 26.706 337 198 11 19 311 20 351 4.50e-32 123
Msa1022490 AT5G59540.1 27.597 308 183 9 54 322 60 366 5.68e-32 123
Msa1022490 AT2G19590.1 29.010 293 154 7 54 301 10 293 6.46e-32 121
Msa1022490 AT5G43440.1 25.962 312 187 9 51 322 58 365 1.49e-31 122
Msa1022490 AT3G19010.2 31.967 244 130 8 32 243 6 245 2.32e-31 119
Msa1022490 AT5G07200.1 25.902 305 176 6 30 288 36 336 4.93e-31 120
Msa1022490 AT2G30840.3 27.492 331 197 12 19 311 20 345 5.83e-31 120
Msa1022490 AT1G80330.1 28.571 294 159 11 55 304 49 335 6.22e-31 120
Msa1022490 AT5G51810.1 25.000 340 200 8 10 308 30 355 1.01e-30 119
Msa1022490 AT1G04350.1 26.012 346 208 12 19 322 21 360 2.77e-30 118
Msa1022490 AT5G43450.1 26.524 328 191 11 29 316 39 356 4.01e-30 117
Msa1022490 AT1G06645.1 29.412 289 157 12 55 302 77 359 4.64e-30 118
Msa1022490 AT5G63595.1 30.534 262 133 8 52 282 22 265 4.89e-30 115
Msa1022490 AT1G06620.1 28.571 294 160 8 54 304 61 347 5.16e-30 117
Msa1022490 AT1G78440.1 26.730 318 168 12 53 315 16 323 6.45e-30 116
Msa1022490 AT1G06640.1 25.532 329 196 10 19 302 25 349 6.75e-30 117
Msa1022490 AT1G06650.2 29.153 295 153 11 55 302 64 349 1.13e-29 117
Msa1022490 AT5G43935.1 27.397 292 150 8 51 303 15 283 5.32e-29 113
Msa1022490 AT3G19000.2 31.416 226 119 6 51 243 28 250 7.66e-29 112
Msa1022490 AT5G12270.1 28.012 332 194 9 31 322 33 359 8.75e-29 114
Msa1022490 AT4G21690.1 26.543 324 178 10 26 303 24 333 2.32e-28 112
Msa1022490 AT4G25300.2 29.474 190 114 2 153 322 73 262 1.29e-27 108
Msa1022490 AT3G49620.1 27.219 338 180 13 30 303 7 342 1.32e-27 110
Msa1022490 AT1G80340.1 26.389 288 167 8 55 303 50 331 1.41e-27 110
Msa1022490 AT1G60980.1 25.532 329 190 8 28 308 33 354 3.47e-27 110
Msa1022490 AT3G51240.2 28.185 259 148 6 99 321 1 257 7.34e-27 107
Msa1022490 AT4G25420.2 24.904 261 161 5 13 242 16 272 6.68e-26 105
Msa1022490 AT1G03410.2 26.316 266 159 7 73 302 78 342 1.28e-25 105
Msa1022490 AT3G49630.1 26.625 323 175 11 51 312 5 326 1.35e-25 105
Msa1022490 AT1G03400.1 24.534 322 197 10 19 302 19 332 2.30e-25 104
Msa1022490 AT1G03410.1 26.316 266 159 7 73 302 115 379 2.36e-25 105
Msa1022490 AT3G49630.3 27.517 298 163 11 66 312 27 322 4.84e-25 103
Msa1022490 AT1G02400.1 27.124 306 165 12 55 312 24 319 5.60e-25 103
Msa1022490 AT3G50210.4 26.667 315 165 12 55 303 8 322 2.40e-24 101
Msa1022490 AT3G50210.1 26.667 315 165 12 55 303 8 322 2.40e-24 101
Msa1022490 AT3G50210.3 26.667 315 165 12 55 303 8 322 2.40e-24 101
Msa1022490 AT1G04380.2 29.858 211 127 6 49 243 39 244 4.12e-24 99.8
Msa1022490 AT1G30040.1 25.325 308 177 11 48 311 23 321 4.20e-24 101
Msa1022490 AT1G06640.3 26.016 246 158 6 19 243 25 267 6.18e-24 99.8
Msa1022490 AT1G06620.2 30.288 208 123 5 54 243 61 264 6.61e-24 99.4
Msa1022490 AT1G06640.2 26.016 246 158 6 19 243 25 267 8.67e-24 99.8
Msa1022490 AT2G30840.2 27.126 247 153 7 19 243 20 261 9.31e-24 99.4
Msa1022490 AT2G34555.1 27.425 299 166 12 55 311 27 316 1.36e-23 99.8
Msa1022490 AT3G61400.1 28.090 267 154 9 73 302 86 351 2.57e-23 99.4
Msa1022490 AT1G06650.1 30.952 210 118 7 55 243 64 267 4.02e-23 97.8
Msa1022490 AT5G59540.2 29.469 207 128 6 54 243 60 265 7.76e-23 96.7
Msa1022490 AT5G63580.2 32.735 223 104 9 51 243 15 221 8.43e-23 95.5
Msa1022490 AT5G63580.1 32.735 223 104 9 51 243 15 221 8.74e-23 95.5
Msa1022490 AT1G47990.1 25.987 304 172 11 54 312 14 309 1.53e-22 96.3
Msa1022490 AT2G19590.2 27.715 267 140 6 79 301 21 278 1.68e-22 95.9
Msa1022490 AT5G43440.2 26.667 210 134 6 51 243 58 264 3.28e-22 95.1
Msa1022490 AT5G51810.2 25.098 255 155 7 10 242 30 270 3.67e-22 95.1
Msa1022490 AT5G43450.2 27.155 232 143 8 29 243 39 261 1.29e-21 93.2
Msa1022490 AT2G25450.1 25.407 307 188 9 55 322 55 359 1.50e-21 94.4
Msa1022490 AT1G03400.2 22.571 350 197 10 19 302 19 360 2.59e-21 94.0
Msa1022490 AT4G23340.1 26.804 291 171 10 52 304 7 293 6.27e-21 92.0
Msa1022490 AT5G07480.2 31.156 199 108 5 153 324 51 247 2.21e-20 89.0
Msa1022490 AT3G46500.5 26.814 317 171 13 37 303 4 309 2.69e-19 87.4
Msa1022490 AT1G14130.1 27.143 280 161 8 55 299 9 280 3.20e-19 87.0
Msa1022490 AT5G51310.1 25.672 335 176 15 51 324 1 323 1.40e-18 85.5
Msa1022490 AT3G61400.2 28.649 185 117 5 73 243 86 269 5.53e-17 80.5
Msa1022490 AT3G46490.1 26.897 290 155 13 74 308 34 321 1.13e-14 74.3
Msa1022490 AT1G30040.2 26.697 221 128 10 48 243 23 234 1.25e-14 73.2
Msa1022490 AT3G46500.7 25.632 277 146 12 37 263 4 270 3.88e-14 72.4
Msa1022490 AT1G52820.1 25.085 295 179 10 49 304 6 297 2.28e-13 70.1
Msa1022490 AT1G28030.1 25.000 308 169 11 50 306 8 304 3.65e-13 69.7
Msa1022490 AT3G46490.2 27.046 281 144 15 74 297 34 310 6.68e-13 68.9
Msa1022490 AT3G49630.2 26.882 186 108 6 153 312 70 253 9.55e-13 67.8
Msa1022490 AT1G02400.2 28.111 217 118 10 55 243 24 230 2.88e-12 66.2
Msa1022490 AT4G16770.1 27.143 210 121 8 54 236 21 225 6.40e-12 65.5

Find 61 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACTTTCTGGTACATCTT+AGG 0.151663 7_1:+48725875 None:intergenic
CAAGGAGTGGGGTTTCTTTC+AGG 0.164682 7_1:-48730216 Msa1022490:intron
AATCTCCATACTTCACTTTC+TGG 0.165711 7_1:+48725864 None:intergenic
AAATCAGAAACAAAGGAAAT+TGG 0.219833 7_1:-48726380 Msa1022490:CDS
CCAAACGACATACAAGGATA+TGG 0.299335 7_1:-48727104 Msa1022490:CDS
CCATATCCTTGTATGTCGTT+TGG 0.313108 7_1:+48727104 None:intergenic
TTCACCATTTCTTGAACATT+TGG 0.333105 7_1:+48730398 None:intergenic
TCACTTTCTGGTACATCTTA+GGG 0.333938 7_1:+48725876 None:intergenic
CATCCCTCATTCTCTGTATA+AGG 0.338709 7_1:+48727183 None:intergenic
CTGACGAGCAAACACTTGAT+TGG 0.354662 7_1:-48727064 Msa1022490:CDS
CATATCCTTGTATGTCGTTT+GGG 0.377345 7_1:+48727105 None:intergenic
CAACAATCCTGAGCAAGTAT+TGG 0.377801 7_1:-48726472 Msa1022490:CDS
AACAATCCTGAGCAAGTATT+GGG 0.378268 7_1:-48726471 Msa1022490:CDS
TGTGAGGAATGAAGAAGAAA+TGG 0.399636 7_1:-48730345 Msa1022490:CDS
ATGTACCAGAAAGTGAAGTA+TGG 0.407509 7_1:-48725869 Msa1022490:CDS
CTGCATAAAGAATTAATTCA+AGG 0.419760 7_1:-48726522 Msa1022490:CDS
CACCGATGTGGCGAAGATAA+AGG 0.432671 7_1:-48725798 Msa1022490:CDS
AGTACCAAATGTTCAAGAAA+TGG 0.435807 7_1:-48730402 Msa1022490:CDS
AATCAGAAACAAAGGAAATT+GGG 0.436978 7_1:-48726379 Msa1022490:intron
ATCATCATCTTGAATAAGTA+AGG 0.445399 7_1:+48726416 None:intergenic
TGAACTTCCAATGGAAGAGA+AGG 0.457590 7_1:-48727144 Msa1022490:CDS
ATTTCTTGAACATTTGGTAC+TGG 0.457677 7_1:+48730404 None:intergenic
CATCTTGAATAAGTAAGGTA+AGG 0.463041 7_1:+48726421 None:intergenic
CTCAAACCCAATACTTGCTC+AGG 0.481452 7_1:+48726465 None:intergenic
ACATTTGGTACTGGTAAAGA+TGG 0.483382 7_1:+48730413 None:intergenic
AGCTGTGCAAAATCAATGAT+AGG 0.484427 7_1:+48730284 None:intergenic
TGAAGTATGGAGATTATTTG+AGG 0.488688 7_1:-48725856 Msa1022490:CDS
TATGTCTATTATCATGGGGT+TGG 0.489175 7_1:-48726565 Msa1022490:CDS
TGAAGCTTCCTATACCGGTT+GGG 0.495476 7_1:+48727014 None:intergenic
AAGACCTTATACAGAGAATG+AGG 0.495673 7_1:-48727187 Msa1022490:CDS
AGCATCTATCATATGATCAA+AGG 0.498371 7_1:+48725904 None:intergenic
ATTCAAGATGATGATGTGCT+TGG 0.506578 7_1:-48726408 Msa1022490:CDS
CAAACGACATACAAGGATAT+GGG 0.511800 7_1:-48727103 Msa1022490:CDS
TGAGAGTGCATGCAAGGAGT+GGG 0.521888 7_1:-48730228 Msa1022490:CDS
GCTCAGGATTGTTGCAAGGA+GGG 0.526591 7_1:+48726481 None:intergenic
TGACAAATCAGAACAAAAGA+AGG 0.528133 7_1:-48725976 Msa1022490:CDS
GCATCTATCATATGATCAAA+GGG 0.540412 7_1:+48725905 None:intergenic
ATATACAAGTGAAGTGAGAC+GGG 0.551444 7_1:-48726610 Msa1022490:CDS
ATGCTCCCAAACGACATACA+AGG 0.573331 7_1:-48727110 Msa1022490:CDS
ACAAGTGAAGTGAGACGGGT+TGG 0.586459 7_1:-48726606 Msa1022490:CDS
TTGAGAGTGCATGCAAGGAG+TGG 0.589476 7_1:-48730229 Msa1022490:CDS
AGGGTGGTTGTGTCAGAGTG+TGG 0.589500 7_1:+48726441 None:intergenic
TGAAGTGAGACGGGTTGGTG+AGG 0.595309 7_1:-48726601 Msa1022490:CDS
TTCCTTTATCTTCGCCACAT+CGG 0.598332 7_1:+48725796 None:intergenic
ATCTTGAATAAGTAAGGTAA+GGG 0.604867 7_1:+48726422 None:intergenic
TCAACTTCAACGTCATCTCG+AGG 0.606004 7_1:+48725929 None:intergenic
CATATACAAGTGAAGTGAGA+CGG 0.611633 7_1:-48726611 Msa1022490:CDS
TTGAATAAGTAAGGTAAGGG+TGG 0.611873 7_1:+48726425 None:intergenic
ACTTGCTCAGGATTGTTGCA+AGG 0.615788 7_1:+48726477 None:intergenic
GGATTAGAAATCAGAAACAA+AGG 0.620128 7_1:-48726387 Msa1022490:CDS
GAAACTTGAGAGTGCATGCA+AGG 0.627771 7_1:-48730234 Msa1022490:CDS
TGCTCAGGATTGTTGCAAGG+AGG 0.630627 7_1:+48726480 None:intergenic
GAGAGTGCATGCAAGGAGTG+GGG 0.631207 7_1:-48730227 Msa1022490:CDS
TGTGAGCAGATATTGAGTAA+TGG 0.633181 7_1:-48726028 Msa1022490:intron
AGACCTTATACAGAGAATGA+GGG 0.635205 7_1:-48727186 Msa1022490:CDS
CAACTTCAACGTCATCTCGA+GGG 0.638366 7_1:+48725930 None:intergenic
TCTTTGCAGATGGTGAATCA+TGG 0.640862 7_1:-48727218 Msa1022490:intron
GGAATCTCAGAAGAAAGTTG+AGG 0.659853 7_1:+48730305 None:intergenic
AAGTTCCAACAAAATATGTG+AGG 0.701291 7_1:-48730361 Msa1022490:CDS
ACAGCTTTCAAATGGGAACG+TGG 0.713673 7_1:-48730267 Msa1022490:CDS
CTAATGTAGAGAGATAACAG+AGG 0.828200 7_1:-48726634 Msa1022490:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAACAATGAATATAATT+AGG - chr7_1:48726211-48726230 Msa1022490:intron 10.0%
!! AAAAACAATGAATATAATTA+GGG - chr7_1:48726212-48726231 Msa1022490:intron 10.0%
!!! AAAATATAATTGTAGTTTTA+TGG - chr7_1:48726801-48726820 Msa1022490:intron 10.0%
!! ACAATATAATAATATATAAG+TGG - chr7_1:48727032-48727051 Msa1022490:CDS 10.0%
!! CAATATAATAATATATAAGT+GGG - chr7_1:48727033-48727052 Msa1022490:CDS 10.0%
!! AATATAATAATATATAAGTG+GGG - chr7_1:48727034-48727053 Msa1022490:CDS 10.0%
!!! TTCTAGATATTTTTATTTTT+AGG + chr7_1:48728532-48728551 None:intergenic 10.0%
!! TAAAAATAAAAATATCTAGA+AGG - chr7_1:48728531-48728550 Msa1022490:intron 10.0%
!! AAAAATTTCAATTAAAAAAC+GGG + chr7_1:48728680-48728699 None:intergenic 10.0%
!! CAAAAATTTCAATTAAAAAA+CGG + chr7_1:48728681-48728700 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTTGACT+TGG + chr7_1:48728768-48728787 None:intergenic 10.0%
!! TAAAAATAGACATATTAAAG+AGG + chr7_1:48726101-48726120 None:intergenic 15.0%
!!! TTTTTATACTCTGATATAAA+TGG + chr7_1:48726704-48726723 None:intergenic 15.0%
!! GTTGAAAAAACAATTAATTA+TGG + chr7_1:48726733-48726752 None:intergenic 15.0%
!! TAAAAATACAATAAACAAGT+AGG - chr7_1:48727086-48727105 Msa1022490:CDS 15.0%
!! AAAAATACAATAAACAAGTA+GGG - chr7_1:48727087-48727106 Msa1022490:CDS 15.0%
!!! AATTTTTTGTGTATAATTCA+GGG + chr7_1:48727144-48727163 None:intergenic 15.0%
!!! AGTTTATTTGTTCAAATTTT+TGG - chr7_1:48727373-48727392 Msa1022490:intron 15.0%
!! AAAAAACGTTAAAAAAAAGA+AGG + chr7_1:48728120-48728139 None:intergenic 15.0%
!!! AATTCATTACTTTTCTTTAA+TGG + chr7_1:48728488-48728507 None:intergenic 15.0%
!! ATTAAAGAAAAGTAATGAAT+TGG - chr7_1:48728487-48728506 Msa1022490:intron 15.0%
!! TTAAAGAAAAGTAATGAATT+GGG - chr7_1:48728488-48728507 Msa1022490:intron 15.0%
!!! TAGATATTTTTATTTTTAGG+TGG + chr7_1:48728529-48728548 None:intergenic 15.0%
!! AAAATTAATAAGTTCCAAAT+CGG - chr7_1:48728835-48728854 Msa1022490:intron 15.0%
!! TATTTAATTCTAGATTCAAA+AGG + chr7_1:48729283-48729302 None:intergenic 15.0%
!!! TCTAGAATTAAATATGATTT+TGG - chr7_1:48729289-48729308 Msa1022490:intron 15.0%
!! AGAATATATTATATCAGTGA+TGG - chr7_1:48726254-48726273 Msa1022490:intron 20.0%
!!! ATCCAGAAATTTTAATAACT+GGG - chr7_1:48726277-48726296 Msa1022490:intron 20.0%
!! CAAAAATAAAATCAAATGAG+TGG + chr7_1:48726352-48726371 None:intergenic 20.0%
!! AAGTTAGTAGTATTAATTAG+GGG + chr7_1:48726438-48726457 None:intergenic 20.0%
!! CAAGTTAGTAGTATTAATTA+GGG + chr7_1:48726439-48726458 None:intergenic 20.0%
!! ACAAGTTAGTAGTATTAATT+AGG + chr7_1:48726440-48726459 None:intergenic 20.0%
!! AAGAAATATGAAAAATGCAA+AGG - chr7_1:48726563-48726582 Msa1022490:CDS 20.0%
!! AGAAATATGAAAAATGCAAA+GGG - chr7_1:48726564-48726583 Msa1022490:CDS 20.0%
!!! TTTTTTTGTAGTGTTATGAA+TGG - chr7_1:48726998-48727017 Msa1022490:intron 20.0%
!!! CAATTTTTTGTGTATAATTC+AGG + chr7_1:48727145-48727164 None:intergenic 20.0%
!! TAAGAATAACAGAAAAAACT+AGG - chr7_1:48727267-48727286 Msa1022490:intron 20.0%
!! AAGAATAACAGAAAAAACTA+GGG - chr7_1:48727268-48727287 Msa1022490:intron 20.0%
!! TTAAGAAAGTTCAATATAGA+AGG - chr7_1:48727309-48727328 Msa1022490:intron 20.0%
!! TAAGAAAGTTCAATATAGAA+GGG - chr7_1:48727310-48727329 Msa1022490:intron 20.0%
!! AATAAAAAGAAAAGAACATG+GGG + chr7_1:48728083-48728102 None:intergenic 20.0%
!! GAATAAAAAGAAAAGAACAT+GGG + chr7_1:48728084-48728103 None:intergenic 20.0%
!! AGAATAAAAAGAAAAGAACA+TGG + chr7_1:48728085-48728104 None:intergenic 20.0%
!! ATCTTAAATAAAGTAAGCTT+AGG - chr7_1:48728183-48728202 Msa1022490:intron 20.0%
!!! ACCATTTTTATTGATTTGTA+GGG + chr7_1:48728653-48728672 None:intergenic 20.0%
!!! TACCATTTTTATTGATTTGT+AGG + chr7_1:48728654-48728673 None:intergenic 20.0%
!! AAAATGTGAGTGAAAAATAA+AGG + chr7_1:48728706-48728725 None:intergenic 20.0%
!!! TTATTTTTGATAAGCAATAG+TGG + chr7_1:48729500-48729519 None:intergenic 20.0%
!!! AAGTTTTATGTCTATTATCA+TGG - chr7_1:48729656-48729675 Msa1022490:intron 20.0%
!!! AGTTTTATGTCTATTATCAT+GGG - chr7_1:48729657-48729676 Msa1022490:intron 20.0%
!! CTAAAATATCTTTTTGTGCA+TGG - chr7_1:48726133-48726152 Msa1022490:intron 25.0%
!!! GATCCAGAAATTTTAATAAC+TGG - chr7_1:48726276-48726295 Msa1022490:intron 25.0%
!!! TCCAGAAATTTTAATAACTG+GGG - chr7_1:48726278-48726297 Msa1022490:intron 25.0%
! TGCATCTAGTAATTTGAAAA+GGG + chr7_1:48726390-48726409 None:intergenic 25.0%
! ATGCATCTAGTAATTTGAAA+AGG + chr7_1:48726391-48726410 None:intergenic 25.0%
!! TATTAATTAGGGGTATGTTT+AGG + chr7_1:48726428-48726447 None:intergenic 25.0%
! CATACAAACAAAGAACAATT+TGG - chr7_1:48726490-48726509 Msa1022490:CDS 25.0%
! GAAATATGAAAAATGCAAAG+GGG - chr7_1:48726565-48726584 Msa1022490:CDS 25.0%
! AAATATGAAAAATGCAAAGG+GGG - chr7_1:48726566-48726585 Msa1022490:CDS 25.0%
!!! TGTTCAAATTTTTGGACAAT+AGG - chr7_1:48727381-48727400 Msa1022490:intron 25.0%
! TACAATGCATAATATATGCA+AGG - chr7_1:48727515-48727534 Msa1022490:intron 25.0%
! TCAGAACAAAGAAATAAGAA+AGG - chr7_1:48727790-48727809 Msa1022490:intron 25.0%
! AACAAAGAAATAAGAAAGGA+AGG - chr7_1:48727794-48727813 Msa1022490:intron 25.0%
! TTTGTAATCTTGTATCTAGT+TGG - chr7_1:48727879-48727898 Msa1022490:intron 25.0%
! TTACCCATTTCTTAAAAGAT+GGG - chr7_1:48728027-48728046 Msa1022490:intron 25.0%
!! TCGAATCATCATATTTTATC+CGG - chr7_1:48728257-48728276 Msa1022490:intron 25.0%
! CACATGTATAAACATATAAC+CGG + chr7_1:48728279-48728298 None:intergenic 25.0%
! ATGTTTATACATGTGTTGTA+AGG - chr7_1:48728284-48728303 Msa1022490:intron 25.0%
!!! ATACTAGTTGGATTTTTTTG+TGG + chr7_1:48728454-48728473 None:intergenic 25.0%
! ATCCAACTAGTATCAAAAAT+AGG - chr7_1:48728461-48728480 Msa1022490:intron 25.0%
!!! CCATTTTTATTGATTTGTAG+GGG + chr7_1:48728652-48728671 None:intergenic 25.0%
!!! AGTCCATTAGTTTAAACTTT+TGG - chr7_1:48728903-48728922 Msa1022490:intron 25.0%
! TTCTTAAGTATGAAGTTTCA+TGG + chr7_1:48728930-48728949 None:intergenic 25.0%
! TCAATATATATCTTTGCAGA+TGG - chr7_1:48728999-48729018 Msa1022490:intron 25.0%
!!! AAATATGATTTTGGTCTCTA+TGG - chr7_1:48729298-48729317 Msa1022490:intron 25.0%
!!! AGTGGTTTATGTTAGTTTTT+AGG + chr7_1:48729482-48729501 None:intergenic 25.0%
!! GTTTTATGTCTATTATCATG+GGG - chr7_1:48729658-48729677 Msa1022490:intron 25.0%
! CTGCATAAAGAATTAATTCA+AGG - chr7_1:48729705-48729724 Msa1022490:intron 25.0%
! ATCTTGAATAAGTAAGGTAA+GGG + chr7_1:48729808-48729827 None:intergenic 25.0%
! ATCATCATCTTGAATAAGTA+AGG + chr7_1:48729814-48729833 None:intergenic 25.0%
! AAATCAGAAACAAAGGAAAT+TGG - chr7_1:48729847-48729866 Msa1022490:intron 25.0%
! AATCAGAAACAAAGGAAATT+GGG - chr7_1:48729848-48729867 Msa1022490:intron 25.0%
! TTAGAAACTACATTCAAACT+TGG - chr7_1:48730023-48730042 Msa1022490:intron 25.0%
!! TTAATTAAGTCACTTTGTGT+CGG + chr7_1:48730144-48730163 None:intergenic 25.0%
ATTTCTTGAACATTTGGTAC+TGG + chr7_1:48725826-48725845 None:intergenic 30.0%
AGTACCAAATGTTCAAGAAA+TGG - chr7_1:48725825-48725844 Msa1022490:CDS 30.0%
TTCACCATTTCTTGAACATT+TGG + chr7_1:48725832-48725851 None:intergenic 30.0%
! TATTTTGTTGGAACTTGCAA+AGG + chr7_1:48725862-48725881 None:intergenic 30.0%
AAGTTCCAACAAAATATGTG+AGG - chr7_1:48725866-48725885 Msa1022490:CDS 30.0%
! TCATTCCTCACATATTTTGT+TGG + chr7_1:48725874-48725893 None:intergenic 30.0%
! ATTTTGCACAGCTTTCAAAT+GGG - chr7_1:48725953-48725972 Msa1022490:CDS 30.0%
! AAATATCTTTTTGTGCATGG+AGG - chr7_1:48726136-48726155 Msa1022490:intron 30.0%
ACCCCAGTTATTAAAATTTC+TGG + chr7_1:48726282-48726301 None:intergenic 30.0%
CAAATGAGTGGTTACATTAA+GGG + chr7_1:48726340-48726359 None:intergenic 30.0%
TCAAATGAGTGGTTACATTA+AGG + chr7_1:48726341-48726360 None:intergenic 30.0%
CATCTAGTAATTTGAAAAGG+GGG + chr7_1:48726388-48726407 None:intergenic 30.0%
GCATCTAGTAATTTGAAAAG+GGG + chr7_1:48726389-48726408 None:intergenic 30.0%
AATATGAAAAATGCAAAGGG+GGG - chr7_1:48726567-48726586 Msa1022490:CDS 30.0%
TAGAACACTCATAACTCATT+AGG - chr7_1:48726956-48726975 Msa1022490:intron 30.0%
TTCTTAATCTCCAACAAAGT+TGG + chr7_1:48727296-48727315 None:intergenic 30.0%
CATAATATATGCAAGGTCTA+AGG - chr7_1:48727522-48727541 Msa1022490:intron 30.0%
GAATGAATCAAGTATTAACC+CGG + chr7_1:48727738-48727757 None:intergenic 30.0%
AAGAAATAAGAAAGGAAGGT+AGG - chr7_1:48727798-48727817 Msa1022490:intron 30.0%
TGTTGTGAATGAATGATGTT+TGG - chr7_1:48727965-48727984 Msa1022490:intron 30.0%
AATGAATGATGTTTGGTATG+CGG - chr7_1:48727972-48727991 Msa1022490:intron 30.0%
CTGTAAGAGTAGTGAAATTA+GGG - chr7_1:48727995-48728014 Msa1022490:intron 30.0%
!! CATCTTTTAAGAAATGGGTA+AGG + chr7_1:48728028-48728047 None:intergenic 30.0%
CTTACCCATTTCTTAAAAGA+TGG - chr7_1:48728026-48728045 Msa1022490:intron 30.0%
!! AAGCCCATCTTTTAAGAAAT+GGG + chr7_1:48728033-48728052 None:intergenic 30.0%
! ATTTCTTAAAAGATGGGCTT+CGG - chr7_1:48728033-48728052 Msa1022490:intron 30.0%
! ATGACTGAATCGGTTTAAAT+CGG + chr7_1:48728332-48728351 None:intergenic 30.0%
!!! GACCTATTTTTGATACTAGT+TGG + chr7_1:48728466-48728485 None:intergenic 30.0%
! AATATCTAGAAGGTACAAGT+AGG - chr7_1:48728541-48728560 Msa1022490:intron 30.0%
!!! CTTTTTGAGTTTCTCTTCAA+TGG + chr7_1:48728581-48728600 None:intergenic 30.0%
CCCCTACAAATCAATAAAAA+TGG - chr7_1:48728649-48728668 Msa1022490:intron 30.0%
ATTAATAAGTTCCAAATCGG+AGG - chr7_1:48728838-48728857 Msa1022490:intron 30.0%
TTAATAAGTTCCAAATCGGA+GGG - chr7_1:48728839-48728858 Msa1022490:intron 30.0%
GGTCCAAAAGTTTAAACTAA+TGG + chr7_1:48728909-48728928 None:intergenic 30.0%
TACTATATGTCACAATCAAG+TGG - chr7_1:48728965-48728984 Msa1022490:intron 30.0%
!!! TGAGTTTTTTGAACTTCCAA+TGG - chr7_1:48729074-48729093 Msa1022490:intron 30.0%
! TTTTGATCATTTATCCCAAC+CGG - chr7_1:48729199-48729218 Msa1022490:intron 30.0%
AAAATTGAAGCTTCCTATAC+CGG + chr7_1:48729221-48729240 None:intergenic 30.0%
TGCTTATAAATGCAATCGAA+TGG + chr7_1:48729350-48729369 None:intergenic 30.0%
AATGAATCTGAAAAAGTGAC+CGG - chr7_1:48729442-48729461 Msa1022490:intron 30.0%
CATCTTGAATAAGTAAGGTA+AGG + chr7_1:48729809-48729828 None:intergenic 30.0%
GGATTAGAAATCAGAAACAA+AGG - chr7_1:48729840-48729859 Msa1022490:intron 30.0%
!! ATAACAAGAGCATCTGATAT+CGG + chr7_1:48729885-48729904 None:intergenic 30.0%
!!! TTTTTTTGTCTTAACCCCTT+AGG - chr7_1:48729932-48729951 Msa1022490:intron 30.0%
CATTTAAGAATGAATCCGTT+TGG + chr7_1:48730055-48730074 None:intergenic 30.0%
ATATCTGCTCACATTCAAAA+AGG + chr7_1:48730192-48730211 None:intergenic 30.0%
TGACAAATCAGAACAAAAGA+AGG - chr7_1:48730251-48730270 Msa1022490:CDS 30.0%
GCATCTATCATATGATCAAA+GGG + chr7_1:48730325-48730344 None:intergenic 30.0%
AGCATCTATCATATGATCAA+AGG + chr7_1:48730326-48730345 None:intergenic 30.0%
TGAAGTATGGAGATTATTTG+AGG - chr7_1:48730371-48730390 Msa1022490:CDS 30.0%
GCATTCCTTAAAGAGAAAAA+TGG - chr7_1:48730393-48730412 Msa1022490:CDS 30.0%
GGTAAAGATGGAGCAAAAAT+GGG + chr7_1:48725805-48725824 None:intergenic 35.0%
TGGTAAAGATGGAGCAAAAA+TGG + chr7_1:48725806-48725825 None:intergenic 35.0%
!! ACATTTGGTACTGGTAAAGA+TGG + chr7_1:48725817-48725836 None:intergenic 35.0%
TGTGAGGAATGAAGAAGAAA+TGG - chr7_1:48725882-48725901 Msa1022490:CDS 35.0%
AGCTGTGCAAAATCAATGAT+AGG + chr7_1:48725946-48725965 None:intergenic 35.0%
! GATTTTGCACAGCTTTCAAA+TGG - chr7_1:48725952-48725971 Msa1022490:CDS 35.0%
TGAAAAGGGGGTTACATTTA+GGG + chr7_1:48726376-48726395 None:intergenic 35.0%
TTGAAAAGGGGGTTACATTT+AGG + chr7_1:48726377-48726396 None:intergenic 35.0%
!! ACGATATGCTCTAAGACAAT+TGG - chr7_1:48726832-48726851 Msa1022490:intron 35.0%
GTTCAATATAGAAGGGAACA+TGG - chr7_1:48727317-48727336 Msa1022490:intron 35.0%
GATAACAAAGGTGGTTAAAG+TGG - chr7_1:48727339-48727358 Msa1022490:intron 35.0%
! CTAGTTGATGTTCTTAAGTG+TGG + chr7_1:48727410-48727429 None:intergenic 35.0%
CTAATATGCCACACTCTAAA+CGG - chr7_1:48727434-48727453 Msa1022490:intron 35.0%
!!! GCCACCATAGTTTTTAAAAC+CGG - chr7_1:48727556-48727575 Msa1022490:intron 35.0%
!!! TGAGCCGGTTTTAAAAACTA+TGG + chr7_1:48727563-48727582 None:intergenic 35.0%
GCTGTAAGAGTAGTGAAATT+AGG - chr7_1:48727994-48728013 Msa1022490:intron 35.0%
!! GAAGCCCATCTTTTAAGAAA+TGG + chr7_1:48728034-48728053 None:intergenic 35.0%
! TTTCTTAAAAGATGGGCTTC+GGG - chr7_1:48728034-48728053 Msa1022490:intron 35.0%
AACATGGGGCTTGAATAAAT+GGG + chr7_1:48728069-48728088 None:intergenic 35.0%
!!! CATAGTTTTAAAACTCGGCT+CGG + chr7_1:48728424-48728443 None:intergenic 35.0%
!!! GCGAGCATAGTTTTAAAACT+CGG + chr7_1:48728429-48728448 None:intergenic 35.0%
!!! CTAGTTGGATTTTTTTGTGG+TGG + chr7_1:48728451-48728470 None:intergenic 35.0%
ACTTGGATAGTACATAGTAG+GGG + chr7_1:48728751-48728770 None:intergenic 35.0%
GACTTGGATAGTACATAGTA+GGG + chr7_1:48728752-48728771 None:intergenic 35.0%
! TGACTTGGATAGTACATAGT+AGG + chr7_1:48728753-48728772 None:intergenic 35.0%
GAGAAAGAAAGAATCTCGTT+TGG - chr7_1:48728795-48728814 Msa1022490:intron 35.0%
! TAATTTTCAACCTCTCCTTC+AGG + chr7_1:48728822-48728841 None:intergenic 35.0%
AAGACCTTATACAGAGAATG+AGG - chr7_1:48729040-48729059 Msa1022490:intron 35.0%
AGACCTTATACAGAGAATGA+GGG - chr7_1:48729041-48729060 Msa1022490:intron 35.0%
! TACTTTTCCTTCTCTTCCAT+TGG + chr7_1:48729093-48729112 None:intergenic 35.0%
! CATATCCTTGTATGTCGTTT+GGG + chr7_1:48729125-48729144 None:intergenic 35.0%
CAAACGACATACAAGGATAT+GGG - chr7_1:48729124-48729143 Msa1022490:intron 35.0%
! GGTATAGGAAGCTTCAATTT+TGG - chr7_1:48729220-48729239 Msa1022490:intron 35.0%
CTAATGTAGAGAGATAACAG+AGG - chr7_1:48729593-48729612 Msa1022490:intron 35.0%
CATATACAAGTGAAGTGAGA+CGG - chr7_1:48729616-48729635 Msa1022490:intron 35.0%
ATATACAAGTGAAGTGAGAC+GGG - chr7_1:48729617-48729636 Msa1022490:intron 35.0%
TATGTCTATTATCATGGGGT+TGG - chr7_1:48729662-48729681 Msa1022490:intron 35.0%
AACAATCCTGAGCAAGTATT+GGG - chr7_1:48729756-48729775 Msa1022490:intron 35.0%
TTGAATAAGTAAGGTAAGGG+TGG + chr7_1:48729805-48729824 None:intergenic 35.0%
! ATTCAAGATGATGATGTGCT+TGG - chr7_1:48729819-48729838 Msa1022490:intron 35.0%
AAACAAAGGAAATTGGGTAC+CGG - chr7_1:48729854-48729873 Msa1022490:intron 35.0%
! GATGCTCTTGTTATCAATGT+TGG - chr7_1:48729891-48729910 Msa1022490:intron 35.0%
CAATGTTGGAGATGTTATAG+AGG - chr7_1:48729905-48729924 Msa1022490:intron 35.0%
!!! TTTTTTGCCGAAAACCTAAG+GGG + chr7_1:48729949-48729968 None:intergenic 35.0%
!!! CTTTTTTGCCGAAAACCTAA+GGG + chr7_1:48729950-48729969 None:intergenic 35.0%
! CTTAGGTTTTCGGCAAAAAA+GGG - chr7_1:48729949-48729968 Msa1022490:intron 35.0%
! TAATCTAGGGTTCGAATGAA+AGG - chr7_1:48729978-48729997 Msa1022490:intron 35.0%
CAAACTTGGATACTTCCAAA+CGG - chr7_1:48730037-48730056 Msa1022490:intron 35.0%
TGTGAGCAGATATTGAGTAA+TGG - chr7_1:48730199-48730218 Msa1022490:intron 35.0%
! TCACTTTCTGGTACATCTTA+GGG + chr7_1:48730354-48730373 None:intergenic 35.0%
! TTCACTTTCTGGTACATCTT+AGG + chr7_1:48730355-48730374 None:intergenic 35.0%
ATGTACCAGAAAGTGAAGTA+TGG - chr7_1:48730358-48730377 Msa1022490:CDS 35.0%
AATCTCCATACTTCACTTTC+TGG + chr7_1:48730366-48730385 None:intergenic 35.0%
!! TCGCTCCATTTTTCTCTTTA+AGG + chr7_1:48730401-48730420 None:intergenic 35.0%
GGAATCTCAGAAGAAAGTTG+AGG + chr7_1:48725925-48725944 None:intergenic 40.0%
TGAGTGGTTACATTAAGGGA+CGG + chr7_1:48726336-48726355 None:intergenic 40.0%
AGCTCTATGACTAACGTTGA+TGG + chr7_1:48726755-48726774 None:intergenic 40.0%
AACTAGGGATCCAACTTTGT+TGG - chr7_1:48727283-48727302 Msa1022490:intron 40.0%
GAAGGGAACATGGATAACAA+AGG - chr7_1:48727327-48727346 Msa1022490:intron 40.0%
! TCATATAGCCGTTTAGAGTG+TGG + chr7_1:48727445-48727464 None:intergenic 40.0%
!!! GCCGGTTTTAAAAACTATGG+TGG + chr7_1:48727560-48727579 None:intergenic 40.0%
!!! TTTTTAAAACCGGCTCAGAC+CGG - chr7_1:48727566-48727585 Msa1022490:intron 40.0%
! GCGGTTTTTATAAACCAGAC+CGG - chr7_1:48727716-48727735 Msa1022490:intron 40.0%
! CGGTTTTTATAAACCAGACC+GGG - chr7_1:48727717-48727736 Msa1022490:intron 40.0%
AATCAAGTATTAACCCGGTC+TGG + chr7_1:48727733-48727752 None:intergenic 40.0%
TCTCACGATTGCTAAGAAGA+TGG - chr7_1:48727920-48727939 Msa1022490:intron 40.0%
GAACATGGGGCTTGAATAAA+TGG + chr7_1:48728070-48728089 None:intergenic 40.0%
TCGGTTTAAATCGGATGACT+CGG + chr7_1:48728323-48728342 None:intergenic 40.0%
GTTGAACTGCATGACTGAAT+CGG + chr7_1:48728342-48728361 None:intergenic 40.0%
GGTTCATTGGTCAAACCATT+GGG + chr7_1:48728371-48728390 None:intergenic 40.0%
TGGTTCATTGGTCAAACCAT+TGG + chr7_1:48728372-48728391 None:intergenic 40.0%
!! TCATTGAGTCACTGGTTCAT+TGG + chr7_1:48728384-48728403 None:intergenic 40.0%
TACAAGTAGGCAAACGTCTT+GGG - chr7_1:48728554-48728573 Msa1022490:intron 40.0%
TATCATTGTTCCCTCCGATT+TGG + chr7_1:48728852-48728871 None:intergenic 40.0%
TCTTTGCAGATGGTGAATCA+TGG - chr7_1:48729009-48729028 Msa1022490:intron 40.0%
CATCCCTCATTCTCTGTATA+AGG + chr7_1:48729047-48729066 None:intergenic 40.0%
TGAACTTCCAATGGAAGAGA+AGG - chr7_1:48729083-48729102 Msa1022490:intron 40.0%
CCATATCCTTGTATGTCGTT+TGG + chr7_1:48729126-48729145 None:intergenic 40.0%
CCAAACGACATACAAGGATA+TGG - chr7_1:48729123-48729142 Msa1022490:intron 40.0%
TCATTTATCCCAACCGGTAT+AGG - chr7_1:48729205-48729224 Msa1022490:intron 40.0%
! TTGAATCCACGAGAGGTTTT+TGG + chr7_1:48729246-48729265 None:intergenic 40.0%
TGCAATCGAATGGAGTATAG+AGG + chr7_1:48729340-48729359 None:intergenic 40.0%
AATCTGAAAAAGTGACCGGT+GGG - chr7_1:48729446-48729465 Msa1022490:intron 40.0%
CAACAATCCTGAGCAAGTAT+TGG - chr7_1:48729755-48729774 Msa1022490:intron 40.0%
!! GCATCTGATATCGGTTTAAC+CGG + chr7_1:48729876-48729895 None:intergenic 40.0%
! GTCTTAACCCCTTAGGTTTT+CGG - chr7_1:48729939-48729958 Msa1022490:intron 40.0%
!!! CCTTTTTTGCCGAAAACCTA+AGG + chr7_1:48729951-48729970 None:intergenic 40.0%
! CCTTAGGTTTTCGGCAAAAA+AGG - chr7_1:48729948-48729967 Msa1022490:intron 40.0%
! TTTTCGGCAAAAAAGGGTCA+GGG - chr7_1:48729955-48729974 Msa1022490:intron 40.0%
AAAAAGGGTCAGGGTAATCT+AGG - chr7_1:48729964-48729983 Msa1022490:intron 40.0%
AAAAGGGTCAGGGTAATCTA+GGG - chr7_1:48729965-48729984 Msa1022490:intron 40.0%
TTCCTTTATCTTCGCCACAT+CGG + chr7_1:48730434-48730453 None:intergenic 40.0%
ACAGCTTTCAAATGGGAACG+TGG - chr7_1:48725960-48725979 Msa1022490:CDS 45.0%
! GAAACTTGAGAGTGCATGCA+AGG - chr7_1:48725993-48726012 Msa1022490:CDS 45.0%
TGGTTACATTAAGGGACGGA+GGG + chr7_1:48726332-48726351 None:intergenic 45.0%
TGCAAAGGGGGGTTACATTA+AGG - chr7_1:48726578-48726597 Msa1022490:CDS 45.0%
GCAAAGGGGGGTTACATTAA+GGG - chr7_1:48726579-48726598 Msa1022490:CDS 45.0%
TTCAGGGACGAATTCAACGT+GGG + chr7_1:48727128-48727147 None:intergenic 45.0%
ATTCAGGGACGAATTCAACG+TGG + chr7_1:48727129-48727148 None:intergenic 45.0%
GGGAACATGGATAACAAAGG+TGG - chr7_1:48727330-48727349 Msa1022490:intron 45.0%
TCACGAGGACTGATACTAGT+TGG + chr7_1:48727476-48727495 None:intergenic 45.0%
CGGCTAAAACCGGTAAAAAC+CGG - chr7_1:48727686-48727705 Msa1022490:intron 45.0%
! GGATGACTCGGAGTATAACT+CGG + chr7_1:48728311-48728330 None:intergenic 45.0%
GTACAAGTAGGCAAACGTCT+TGG - chr7_1:48728553-48728572 Msa1022490:intron 45.0%
! AGCAAAAGTGTAGGGGTGTA+GGG + chr7_1:48728625-48728644 None:intergenic 45.0%
! AAGCAAAAGTGTAGGGGTGT+AGG + chr7_1:48728626-48728645 None:intergenic 45.0%
! GGGTGAAAGCAAAAGTGTAG+GGG + chr7_1:48728632-48728651 None:intergenic 45.0%
! GGGGTGAAAGCAAAAGTGTA+GGG + chr7_1:48728633-48728652 None:intergenic 45.0%
! AGGGGTGAAAGCAAAAGTGT+AGG + chr7_1:48728634-48728653 None:intergenic 45.0%
! GGGTGAACGTAAAAGTGTAG+GGG + chr7_1:48728731-48728750 None:intergenic 45.0%
! GGGGTGAACGTAAAAGTGTA+GGG + chr7_1:48728732-48728751 None:intergenic 45.0%
! AGGGGTGAACGTAAAAGTGT+AGG + chr7_1:48728733-48728752 None:intergenic 45.0%
AGAATCTCGTTTGGACCTGA+AGG - chr7_1:48728804-48728823 Msa1022490:intron 45.0%
ATGCTCCCAAACGACATACA+AGG - chr7_1:48729117-48729136 Msa1022490:intron 45.0%
CTGACGAGCAAACACTTGAT+TGG - chr7_1:48729163-48729182 Msa1022490:intron 45.0%
! TGAAGCTTCCTATACCGGTT+GGG + chr7_1:48729216-48729235 None:intergenic 45.0%
TTGAAGCTTCCTATACCGGT+TGG + chr7_1:48729217-48729236 None:intergenic 45.0%
! TTTTGGCCAAAAACCTCTCG+TGG - chr7_1:48729237-48729256 Msa1022490:intron 45.0%
GAATCTGAAAAAGTGACCGG+TGG - chr7_1:48729445-48729464 Msa1022490:intron 45.0%
TTAGGTCTTACAACTCCCAC+CGG + chr7_1:48729464-48729483 None:intergenic 45.0%
ACTTGCTCAGGATTGTTGCA+AGG + chr7_1:48729753-48729772 None:intergenic 45.0%
CTCAAACCCAATACTTGCTC+AGG + chr7_1:48729765-48729784 None:intergenic 45.0%
! GTTTTCGGCAAAAAAGGGTC+AGG - chr7_1:48729954-48729973 Msa1022490:intron 45.0%
!! ACTTTGTGTCGGTGCTACAT+AGG + chr7_1:48730133-48730152 None:intergenic 45.0%
CAACTTCAACGTCATCTCGA+GGG + chr7_1:48730300-48730319 None:intergenic 45.0%
TCAACTTCAACGTCATCTCG+AGG + chr7_1:48730301-48730320 None:intergenic 45.0%
! TTGAGAGTGCATGCAAGGAG+TGG - chr7_1:48725998-48726017 Msa1022490:CDS 50.0%
! TGAGAGTGCATGCAAGGAGT+GGG - chr7_1:48725999-48726018 Msa1022490:CDS 50.0%
CAAGGAGTGGGGTTTCTTTC+AGG - chr7_1:48726011-48726030 Msa1022490:CDS 50.0%
GTGGTTACATTAAGGGACGG+AGG + chr7_1:48726333-48726352 None:intergenic 50.0%
AGGGGGGTTACATTAAGGGA+CGG - chr7_1:48726583-48726602 Msa1022490:CDS 50.0%
GGGTTACATTAAGGGACGGA+GGG - chr7_1:48726587-48726606 Msa1022490:CDS 50.0%
AATTCAACGTGGGGGCAATG+GGG + chr7_1:48727118-48727137 None:intergenic 50.0%
GAATTCAACGTGGGGGCAAT+GGG + chr7_1:48727119-48727138 None:intergenic 50.0%
TCAGGGACGAATTCAACGTG+GGG + chr7_1:48727127-48727146 None:intergenic 50.0%
CCAACTGAGTTAAGCTCACG+AGG + chr7_1:48727491-48727510 None:intergenic 50.0%
CCTCGTGAGCTTAACTCAGT+TGG - chr7_1:48727488-48727507 Msa1022490:intron 50.0%
GATCGGGCATGTTGTTGAAC+CGG - chr7_1:48727646-48727665 Msa1022490:intron 50.0%
TATAAAAACCGCCGAGTCGC+CGG + chr7_1:48727708-48727727 None:intergenic 50.0%
CAGTTCAACCAGTGACCCAA+TGG - chr7_1:48728353-48728372 Msa1022490:intron 50.0%
TGGTCAAACCATTGGGTCAC+TGG + chr7_1:48728364-48728383 None:intergenic 50.0%
CGGTAAGGTCATTGAGTCAC+TGG + chr7_1:48728392-48728411 None:intergenic 50.0%
CAATGACCTTACCGAGTCGA+TGG - chr7_1:48728398-48728417 Msa1022490:intron 50.0%
TGCGTACTTGAATCCACGAG+AGG + chr7_1:48729253-48729272 None:intergenic 50.0%
ACAAGTGAAGTGAGACGGGT+TGG - chr7_1:48729621-48729640 Msa1022490:intron 50.0%
GCTCAGGATTGTTGCAAGGA+GGG + chr7_1:48729749-48729768 None:intergenic 50.0%
TGCTCAGGATTGTTGCAAGG+AGG + chr7_1:48729750-48729769 None:intergenic 50.0%
GCGAAAAACACACACCGATG+TGG - chr7_1:48730417-48730436 Msa1022490:CDS 50.0%
CACCGATGTGGCGAAGATAA+AGG - chr7_1:48730429-48730448 Msa1022490:CDS 50.0%
! GAGAGTGCATGCAAGGAGTG+GGG - chr7_1:48726000-48726019 Msa1022490:CDS 55.0%
GGGGTTACATTAAGGGACGG+AGG - chr7_1:48726586-48726605 Msa1022490:CDS 55.0%
CGAATTCAACGTGGGGGCAA+TGG + chr7_1:48727120-48727139 None:intergenic 55.0%
CAGGGACGAATTCAACGTGG+GGG + chr7_1:48727126-48727145 None:intergenic 55.0%
! GTCTGGTTCGAGCTGTCTTG+CGG - chr7_1:48727624-48727643 Msa1022490:intron 55.0%
GTTCGAGCTGTCTTGCGGAT+CGG - chr7_1:48727629-48727648 Msa1022490:intron 55.0%
TTCGAGCTGTCTTGCGGATC+GGG - chr7_1:48727630-48727649 Msa1022490:intron 55.0%
GTTGTTGAACCGGTGCGAAC+CGG - chr7_1:48727656-48727675 Msa1022490:intron 55.0%
!! CGGTTTTAGCCGAGCCATAC+CGG + chr7_1:48727678-48727697 None:intergenic 55.0%
! CGGTATGGCTCGGCTAAAAC+CGG - chr7_1:48727676-48727695 Msa1022490:intron 55.0%
ACCGGTAAAAACCGGCGACT+CGG - chr7_1:48727694-48727713 Msa1022490:intron 55.0%
CTCGTTTGGACCTGAAGGAG+AGG - chr7_1:48728809-48728828 Msa1022490:intron 55.0%
!! TGAAGTGAGACGGGTTGGTG+AGG - chr7_1:48729626-48729645 Msa1022490:intron 55.0%
AGGGTGGTTGTGTCAGAGTG+TGG + chr7_1:48729789-48729808 None:intergenic 55.0%
! TAAAACCGGCTCAGACCGGC+CGG - chr7_1:48727570-48727589 Msa1022490:intron 60.0%
TGAACCGGTGCGAACCGGTA+TGG - chr7_1:48727661-48727680 Msa1022490:intron 60.0%
!!! GCCGAGTCGCCGGTTTTTAC+CGG + chr7_1:48727698-48727717 None:intergenic 60.0%
! GGTAAAAACCGGCGACTCGG+CGG - chr7_1:48727697-48727716 Msa1022490:intron 60.0%
GAACCGGTCCGACCAGGAAC+CGG - chr7_1:48727595-48727614 Msa1022490:intron 65.0%
ACACCCCTCCGGTTCCTGGT+CGG + chr7_1:48727606-48727625 None:intergenic 65.0%
GCTCGAACCAGACACCCCTC+CGG + chr7_1:48727617-48727636 None:intergenic 65.0%
!! CGAGCCATACCGGTTCGCAC+CGG + chr7_1:48727668-48727687 None:intergenic 65.0%
CGGTGCGAACCGGTATGGCT+CGG - chr7_1:48727666-48727685 Msa1022490:intron 65.0%
!! GCTCGGCCATCGACTCGGTA+AGG + chr7_1:48728407-48728426 None:intergenic 65.0%
!! ACTCGGCTCGGCCATCGACT+CGG + chr7_1:48728412-48728431 None:intergenic 65.0%
TTCGACCGGCCGGTCTGAGC+CGG + chr7_1:48727578-48727597 None:intergenic 70.0%
CTCAGACCGGCCGGTCGAAC+CGG - chr7_1:48727579-48727598 Msa1022490:intron 70.0%
!! CCTGGTCGGACCGGTTCGAC+CGG + chr7_1:48727592-48727611 None:intergenic 70.0%
CCTCCGGTTCCTGGTCGGAC+CGG + chr7_1:48727601-48727620 None:intergenic 70.0%
CGGTCCGACCAGGAACCGGA+GGG - chr7_1:48727599-48727618 Msa1022490:intron 70.0%
GGTCCGACCAGGAACCGGAG+GGG - chr7_1:48727600-48727619 Msa1022490:intron 70.0%
CCAGACACCCCTCCGGTTCC+TGG + chr7_1:48727610-48727629 None:intergenic 70.0%
!! CCAGGAACCGGAGGGGTGTC+TGG - chr7_1:48727607-48727626 Msa1022490:intron 70.0%
!! GTCGGACCGGTTCGACCGGC+CGG + chr7_1:48727588-48727607 None:intergenic 75.0%
CCGGTCGAACCGGTCCGACC+AGG - chr7_1:48727589-48727608 Msa1022490:intron 75.0%
CCGGTCCGACCAGGAACCGG+AGG - chr7_1:48727598-48727617 Msa1022490:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 48725778 48730471 48725778 ID=Msa1022490;Name=Msa1022490
chr7_1 mRNA 48725778 48730471 48725778 ID=Msa1022490-mRNA-1;Parent=Msa1022490;Name=Msa1022490-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.33|0|1|1|1|4|0|329
chr7_1 exon 48730217 48730471 48730217 ID=Msa1022490-mRNA-1:exon:9573;Parent=Msa1022490-mRNA-1
chr7_1 exon 48727029 48727231 48727029 ID=Msa1022490-mRNA-1:exon:9572;Parent=Msa1022490-mRNA-1
chr7_1 exon 48726380 48726647 48726380 ID=Msa1022490-mRNA-1:exon:9571;Parent=Msa1022490-mRNA-1
chr7_1 exon 48725778 48726041 48725778 ID=Msa1022490-mRNA-1:exon:9570;Parent=Msa1022490-mRNA-1
chr7_1 CDS 48730217 48730471 48730217 ID=Msa1022490-mRNA-1:cds;Parent=Msa1022490-mRNA-1
chr7_1 CDS 48727029 48727231 48727029 ID=Msa1022490-mRNA-1:cds;Parent=Msa1022490-mRNA-1
chr7_1 CDS 48726380 48726647 48726380 ID=Msa1022490-mRNA-1:cds;Parent=Msa1022490-mRNA-1
chr7_1 CDS 48725778 48726041 48725778 ID=Msa1022490-mRNA-1:cds;Parent=Msa1022490-mRNA-1
Gene Sequence

>Msa1022490

ATGAGTGTCAACATAGATGAAGCACCCATTTTTGCTCCATCTTTACCAGTACCAAATGTTCAAGAAATGGTGAAGACGAATCCTTTGCAAGTTCCAACAAAATATGTGAGGAATGAAGAAGAAATGGAGAAAGTAAACTACATGCCTCAACTTTCTTCTGAGATTCCTATCATTGATTTTGCACAGCTTTCAAATGGGAACGTGGAAGAGTTGCTGAAACTTGAGAGTGCATGCAAGGAGTGGGGTTTCTTTCAGATGGTGAATCATGGTGTGCAAAAAGACCTTATACAGAGAATGAGGGATGCATCAAATGAGTTTTTTGAACTTCCAATGGAAGAGAAGGAAAAGTATGCAATGCTCCCAAACGACATACAAGGATATGGGCAAAATTATGTTGTTTCTGACGAGCAAACACTTGATTGGTCAGACGTACTAGTTTTGATCATTTATCCCAACCGAGAGATAACAGAGGCATATACAAGTGAAGTGAGACGGGTTGGTGAGGAACTTCTAAGTTTTATGTCTATTATCATGGGGTTGGAGAAGCATGCTCTTGCTGAACTGCATAAAGAATTAATTCAAGGTTTACGTGTGAACTATTACCCTCCTTGCAACAATCCTGAGCAAGTATTGGGTTTGAGTCCACACTCTGACACAACCACCCTTACCTTACTTATTCAAGATGATGATGTGCTTGGATTAGAAATCAGAAACAAAGGAAATTGGATATTGAGTAATGGAAAATACAAAAGTGTAGAACACAGAGTAATGACAAATCAGAACAAAAGAAGGATTTCTTATGCATCATTTTTGTTCCCTCGAGATGACGTTGAAGTTGAGCCCTTTGATCATATGATAGATGCTCAAAACCCTAAGATGTACCAGAAAGTGAAGTATGGAGATTATTTGAGGCATTCCTTAAAGAGAAAAATGGAGCGAAAAACACACACCGATGTGGCGAAGATAAAGGAACATGTAATCGAGAAATAA

Protein sequence

>Msa1022490

MSVNIDEAPIFAPSLPVPNVQEMVKTNPLQVPTKYVRNEEEMEKVNYMPQLSSEIPIIDFAQLSNGNVEELLKLESACKEWGFFQMVNHGVQKDLIQRMRDASNEFFELPMEEKEKYAMLPNDIQGYGQNYVVSDEQTLDWSDVLVLIIYPNREITEAYTSEVRRVGEELLSFMSIIMGLEKHALAELHKELIQGLRVNYYPPCNNPEQVLGLSPHSDTTTLTLLIQDDDVLGLEIRNKGNWILSNGKYKSVEHRVMTNQNKRRISYASFLFPRDDVEVEPFDHMIDAQNPKMYQKVKYGDYLRHSLKRKMERKTHTDVAKIKEHVIEK*