Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0069480 | XP_003591981.1 | 82.381 | 210 | 12 | 1 | 1 | 210 | 1 | 185 | 3.91e-119 | 346 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0069480 | G7I9N5 | 82.381 | 210 | 12 | 1 | 1 | 210 | 1 | 185 | 1.87e-119 | 346 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0009560 | Msa0069480 | -0.804019 | 2.640596e-49 | -8.615850e-47 |
| Msa0010150 | Msa0069480 | 0.814986 | 1.164823e-51 | -8.615850e-47 |
| Msa0024280 | Msa0069480 | 0.804933 | 1.702800e-49 | -8.615850e-47 |
| Msa0024290 | Msa0069480 | 0.828539 | 8.497553e-55 | -8.615850e-47 |
| Msa0033180 | Msa0069480 | 0.800493 | 1.404823e-48 | -8.615850e-47 |
| Msa0034100 | Msa0069480 | -0.801960 | 7.036744e-49 | -8.615850e-47 |
| Msa0045620 | Msa0069480 | 0.804180 | 2.444276e-49 | -8.615850e-47 |
| Msa0048950 | Msa0069480 | 0.840453 | 8.618706e-58 | -8.615850e-47 |
| Msa0059880 | Msa0069480 | 0.829081 | 6.285644e-55 | -8.615850e-47 |
| Msa0069480 | Msa0072030 | 0.834428 | 3.014415e-56 | -8.615850e-47 |
| Msa0069480 | Msa0074620 | 0.849303 | 3.525946e-60 | -8.615850e-47 |
| Msa0069480 | Msa0092220 | 0.801259 | 9.798266e-49 | -8.615850e-47 |
| Msa0069480 | Msa0099090 | -0.804980 | 1.664402e-49 | -8.615850e-47 |
| Msa0069480 | Msa0121320 | 0.807599 | 4.673081e-50 | -8.615850e-47 |
| Msa0069480 | Msa0131460 | 0.920420 | 1.309739e-87 | -8.615850e-47 |
| Msa0069480 | Msa0132080 | -0.821039 | 4.990824e-53 | -8.615850e-47 |
| Msa0069480 | Msa0140270 | 0.808598 | 2.863215e-50 | -8.615850e-47 |
| Msa0069480 | Msa0146210 | 0.821424 | 4.067097e-53 | -8.615850e-47 |
| Msa0069480 | Msa0147680 | 0.808115 | 3.629837e-50 | -8.615850e-47 |
| Msa0069480 | Msa0150910 | 0.829304 | 5.547448e-55 | -8.615850e-47 |
| Msa0069480 | Msa0163340 | 0.822957 | 1.793409e-53 | -8.615850e-47 |
| Msa0069480 | Msa0163370 | 0.803108 | 4.079127e-49 | -8.615850e-47 |
| Msa0069480 | Msa0163960 | -0.800415 | 1.457139e-48 | -8.615850e-47 |
| Msa0069480 | Msa0170990 | 0.839786 | 1.286292e-57 | -8.615850e-47 |
| Msa0069480 | Msa0177260 | 0.922304 | 1.169971e-88 | -8.615850e-47 |
| Msa0069480 | Msa0190670 | 0.808070 | 3.710815e-50 | -8.615850e-47 |
| Msa0069480 | Msa0190890 | 0.804360 | 2.242745e-49 | -8.615850e-47 |
| Msa0069480 | Msa0191100 | 0.806949 | 6.417510e-50 | -8.615850e-47 |
| Msa0069480 | Msa0210790 | 0.805303 | 1.424426e-49 | -8.615850e-47 |
| Msa0069480 | Msa0210850 | 0.806228 | 9.109971e-50 | -8.615850e-47 |
| Msa0069480 | Msa0218140 | 0.800562 | 1.359446e-48 | -8.615850e-47 |
| Msa0069480 | Msa0219810 | 0.807488 | 4.932085e-50 | -8.615850e-47 |
| Msa0069480 | Msa0220090 | 0.804388 | 2.212966e-49 | -8.615850e-47 |
| Msa0069480 | Msa0223590 | 0.805318 | 1.414360e-49 | -8.615850e-47 |
| Msa0069480 | Msa0233210 | 0.802275 | 6.059844e-49 | -8.615850e-47 |
| Msa0069480 | Msa0235080 | 0.806767 | 7.008982e-50 | -8.615850e-47 |
| Msa0069480 | Msa0251120 | 0.807409 | 5.126786e-50 | -8.615850e-47 |
| Msa0069480 | Msa0264890 | 0.823545 | 1.307300e-53 | -8.615850e-47 |
| Msa0069480 | Msa0269720 | 0.800942 | 1.137638e-48 | -8.615850e-47 |
| Msa0069480 | Msa0271180 | 0.802089 | 6.618723e-49 | -8.615850e-47 |
| Msa0069480 | Msa0274250 | 0.808353 | 3.228936e-50 | -8.615850e-47 |
| Msa0069480 | Msa0278460 | 0.808397 | 3.160534e-50 | -8.615850e-47 |
| Msa0069480 | Msa0278480 | 0.802732 | 4.879029e-49 | -8.615850e-47 |
| Msa0069480 | Msa0311540 | 0.832177 | 1.096922e-55 | -8.615850e-47 |
| Msa0069480 | Msa0314440 | 0.801534 | 8.603942e-49 | -8.615850e-47 |
| Msa0069480 | Msa0317300 | 0.807600 | 4.670865e-50 | -8.615850e-47 |
| Msa0069480 | Msa0318510 | 0.808835 | 2.547955e-50 | -8.615850e-47 |
| Msa0069480 | Msa0327890 | 0.813237 | 2.833152e-51 | -8.615850e-47 |
| Msa0069480 | Msa0328090 | 0.811065 | 8.432953e-51 | -8.615850e-47 |
| Msa0069480 | Msa0340270 | 0.817147 | 3.834896e-52 | -8.615850e-47 |
| Msa0069480 | Msa0349910 | 0.814831 | 1.261110e-51 | -8.615850e-47 |
| Msa0069480 | Msa0349930 | 0.804221 | 2.397119e-49 | -8.615850e-47 |
| Msa0069480 | Msa0354550 | 0.801243 | 9.873164e-49 | -8.615850e-47 |
| Msa0069480 | Msa0364030 | -0.802309 | 5.964961e-49 | -8.615850e-47 |
| Msa0069480 | Msa0366510 | 0.828703 | 7.756737e-55 | -8.615850e-47 |
| Msa0069480 | Msa0374040 | 0.810348 | 1.205296e-50 | -8.615850e-47 |
| Msa0069480 | Msa0379480 | 0.802826 | 4.666304e-49 | -8.615850e-47 |
| Msa0069480 | Msa0403740 | -0.802830 | 4.656395e-49 | -8.615850e-47 |
| Msa0069480 | Msa0414480 | 0.800757 | 1.240807e-48 | -8.615850e-47 |
| Msa0069480 | Msa0425950 | 0.808688 | 2.738387e-50 | -8.615850e-47 |
| Msa0069480 | Msa0426030 | 0.813063 | 3.093304e-51 | -8.615850e-47 |
| Msa0069480 | Msa0426170 | 0.822179 | 2.720726e-53 | -8.615850e-47 |
| Msa0069480 | Msa0427260 | -0.814005 | 1.919868e-51 | -8.615850e-47 |
| Msa0069480 | Msa0430460 | 0.805199 | 1.498342e-49 | -8.615850e-47 |
| Msa0069480 | Msa0456450 | -0.800113 | 1.678057e-48 | -8.615850e-47 |
| Msa0069480 | Msa0464310 | 0.802913 | 4.477365e-49 | -8.615850e-47 |
| Msa0069480 | Msa0484410 | 0.802756 | 4.824189e-49 | -8.615850e-47 |
| Msa0069480 | Msa0491770 | 0.825075 | 5.712547e-54 | -8.615850e-47 |
| Msa0069480 | Msa0491800 | 0.803558 | 3.292044e-49 | -8.615850e-47 |
| Msa0069480 | Msa0515130 | 0.817835 | 2.683874e-52 | -8.615850e-47 |
| Msa0069480 | Msa0515150 | 0.810061 | 1.389648e-50 | -8.615850e-47 |
| Msa0069480 | Msa0535570 | 0.836311 | 1.008039e-56 | -8.615850e-47 |
| Msa0069480 | Msa0538050 | -0.808576 | 2.893342e-50 | -8.615850e-47 |
| Msa0069480 | Msa0543740 | 0.815085 | 1.107452e-51 | -8.615850e-47 |
| Msa0069480 | Msa0562050 | 0.824117 | 9.603802e-54 | -8.615850e-47 |
| Msa0069480 | Msa0566460 | 0.807610 | 4.647380e-50 | -8.615850e-47 |
| Msa0069480 | Msa0583390 | 0.804716 | 1.890506e-49 | -8.615850e-47 |
| Msa0069480 | Msa0601400 | 0.800545 | 1.370444e-48 | -8.615850e-47 |
| Msa0069480 | Msa0602050 | 0.811189 | 7.929417e-51 | -8.615850e-47 |
| Msa0069480 | Msa0605470 | 0.814650 | 1.382847e-51 | -8.615850e-47 |
| Msa0069480 | Msa0606600 | 0.803223 | 3.862461e-49 | -8.615850e-47 |
| Msa0069480 | Msa0616010 | 0.812628 | 3.852732e-51 | -8.615850e-47 |
| Msa0069480 | Msa0619670 | 0.811639 | 6.330691e-51 | -8.615850e-47 |
| Msa0069480 | Msa0623310 | 0.800693 | 1.278782e-48 | -8.615850e-47 |
| Msa0069480 | Msa0623980 | 0.817168 | 3.792264e-52 | -8.615850e-47 |
| Msa0069480 | Msa0624930 | 0.800593 | 1.340374e-48 | -8.615850e-47 |
| Msa0069480 | Msa0631700 | 0.828181 | 1.036672e-54 | -8.615850e-47 |
| Msa0069480 | Msa0641700 | 0.810143 | 1.334797e-50 | -8.615850e-47 |
| Msa0069480 | Msa0643840 | 0.819729 | 9.965972e-53 | -8.615850e-47 |
| Msa0069480 | Msa0645150 | 0.809399 | 1.928950e-50 | -8.615850e-47 |
| Msa0069480 | Msa0650310 | 0.811755 | 5.973971e-51 | -8.615850e-47 |
| Msa0069480 | Msa0655430 | 0.829332 | 5.462373e-55 | -8.615850e-47 |
| Msa0069480 | Msa0658120 | 0.821987 | 3.013285e-53 | -8.615850e-47 |
| Msa0069480 | Msa0665830 | 0.802147 | 6.440083e-49 | -8.615850e-47 |
| Msa0069480 | Msa0670360 | 0.813077 | 3.072298e-51 | -8.615850e-47 |
| Msa0069480 | Msa0671400 | 0.810334 | 1.213777e-50 | -8.615850e-47 |
| Msa0069480 | Msa0678620 | 0.825185 | 5.381095e-54 | -8.615850e-47 |
| Msa0069480 | Msa0680460 | 0.801992 | 6.930861e-49 | -8.615850e-47 |
| Msa0069480 | Msa0695630 | 0.820198 | 7.784172e-53 | -8.615850e-47 |
| Msa0069480 | Msa0702970 | 0.803297 | 3.729318e-49 | -8.615850e-47 |
| Msa0069480 | Msa0705520 | 0.803599 | 3.227349e-49 | -8.615850e-47 |
| Msa0069480 | Msa0711230 | 0.800783 | 1.225878e-48 | -8.615850e-47 |
| Msa0069480 | Msa0711240 | 0.808310 | 3.298292e-50 | -8.615850e-47 |
| Msa0069480 | Msa0716700 | 0.816989 | 4.161729e-52 | -8.615850e-47 |
| Msa0069480 | Msa0727480 | 0.817368 | 3.419498e-52 | -8.615850e-47 |
| Msa0069480 | Msa0738410 | 0.814943 | 1.191085e-51 | -8.615850e-47 |
| Msa0069480 | Msa0754750 | 0.811237 | 7.741486e-51 | -8.615850e-47 |
| Msa0069480 | Msa0756670 | -0.807715 | 4.414933e-50 | -8.615850e-47 |
| Msa0069480 | Msa0761570 | 0.804761 | 1.849571e-49 | -8.615850e-47 |
| Msa0069480 | Msa0761830 | 0.815121 | 1.087233e-51 | -8.615850e-47 |
| Msa0069480 | Msa0768720 | 0.813210 | 2.872882e-51 | -8.615850e-47 |
| Msa0069480 | Msa0772420 | 0.817845 | 2.668803e-52 | -8.615850e-47 |
| Msa0069480 | Msa0784840 | 0.804368 | 2.233992e-49 | -8.615850e-47 |
| Msa0069480 | Msa0804170 | 0.806479 | 8.062972e-50 | -8.615850e-47 |
| Msa0069480 | Msa0814160 | 0.819470 | 1.142276e-52 | -8.615850e-47 |
| Msa0069480 | Msa0824860 | 0.801370 | 9.296912e-49 | -8.615850e-47 |
| Msa0069480 | Msa0828350 | 0.821940 | 3.090264e-53 | -8.615850e-47 |
| Msa0069480 | Msa0836060 | -0.809538 | 1.801103e-50 | -8.615850e-47 |
| Msa0069480 | Msa0841670 | 0.809687 | 1.673300e-50 | -8.615850e-47 |
| Msa0069480 | Msa0847140 | 0.810838 | 9.444139e-51 | -8.615850e-47 |
| Msa0069480 | Msa0852890 | 0.809140 | 2.192435e-50 | -8.615850e-47 |
| Msa0069480 | Msa0854840 | 0.809228 | 2.099348e-50 | -8.615850e-47 |
| Msa0069480 | Msa0861400 | -0.822192 | 2.701537e-53 | -8.615850e-47 |
| Msa0069480 | Msa0867080 | 0.823380 | 1.429212e-53 | -8.615850e-47 |
| Msa0069480 | Msa0869660 | 0.802420 | 5.657551e-49 | -8.615850e-47 |
| Msa0069480 | Msa0883640 | 0.805915 | 1.060217e-49 | -8.615850e-47 |
| Msa0069480 | Msa0893840 | 0.831772 | 1.381399e-55 | -8.615850e-47 |
| Msa0069480 | Msa0896920 | 0.815894 | 7.316069e-52 | -8.615850e-47 |
| Msa0069480 | Msa0898830 | -0.819199 | 1.316564e-52 | -8.615850e-47 |
| Msa0069480 | Msa0902340 | 0.814806 | 1.277090e-51 | -8.615850e-47 |
| Msa0069480 | Msa0910830 | 0.819726 | 9.985408e-53 | -8.615850e-47 |
| Msa0069480 | Msa0960090 | 0.807612 | 4.642070e-50 | -8.615850e-47 |
| Msa0069480 | Msa0985700 | 0.806994 | 6.277171e-50 | -8.615850e-47 |
| Msa0069480 | Msa0987640 | 0.802777 | 4.776037e-49 | -8.615850e-47 |
| Msa0069480 | Msa0987670 | 0.812539 | 4.029210e-51 | -8.615850e-47 |
| Msa0069480 | Msa0993450 | 0.815909 | 7.258360e-52 | -8.615850e-47 |
| Msa0069480 | Msa1003110 | 0.806216 | 9.160727e-50 | -8.615850e-47 |
| Msa0069480 | Msa1021620 | 0.809978 | 1.448212e-50 | -8.615850e-47 |
| Msa0069480 | Msa1022490 | 0.806216 | 9.162275e-50 | -8.615850e-47 |
| Msa0069480 | Msa1022510 | 0.817866 | 2.640920e-52 | -8.615850e-47 |
| Msa0069480 | Msa1026050 | 0.806152 | 9.450478e-50 | -8.615850e-47 |
| Msa0069480 | Msa1030320 | 0.800672 | 1.291193e-48 | -8.615850e-47 |
| Msa0069480 | Msa1037350 | 0.811211 | 7.841144e-51 | -8.615850e-47 |
| Msa0069480 | Msa1043020 | -0.806960 | 6.381468e-50 | -8.615850e-47 |
| Msa0069480 | Msa1050540 | -0.813920 | 2.004941e-51 | -8.615850e-47 |
| Msa0069480 | Msa1061670 | 0.816767 | 4.665671e-52 | -8.615850e-47 |
| Msa0069480 | Msa1076830 | 0.858399 | 8.463065e-63 | -8.615850e-47 |
| Msa0069480 | Msa1081610 | 0.800678 | 1.287551e-48 | -8.615850e-47 |
| Msa0069480 | Msa1087370 | 0.808989 | 2.361839e-50 | -8.615850e-47 |
| Msa0069480 | Msa1096520 | -0.800307 | 1.532610e-48 | -8.615850e-47 |
| Msa0069480 | Msa1096570 | -0.800340 | 1.509188e-48 | -8.615850e-47 |
| Msa0069480 | Msa1098100 | 0.824270 | 8.839978e-54 | -8.615850e-47 |
| Msa0069480 | Msa1104960 | 0.823034 | 1.721407e-53 | -8.615850e-47 |
| Msa0069480 | Msa1106680 | 0.824314 | 8.629913e-54 | -8.615850e-47 |
| Msa0069480 | Msa1106960 | 0.813628 | 2.324541e-51 | -8.615850e-47 |
| Msa0069480 | Msa1109880 | 0.812403 | 4.314098e-51 | -8.615850e-47 |
| Msa0069480 | Msa1109890 | 0.807403 | 5.142781e-50 | -8.615850e-47 |
| Msa0069480 | Msa1111650 | 0.814261 | 1.685858e-51 | -8.615850e-47 |
| Msa0069480 | Msa1123010 | 0.814537 | 1.465015e-51 | -8.615850e-47 |
| Msa0069480 | Msa1127200 | 0.805961 | 1.036464e-49 | -8.615850e-47 |
| Msa0069480 | Msa1133860 | 0.801569 | 8.464373e-49 | -8.615850e-47 |
| Msa0069480 | Msa1138110 | 0.824973 | 6.038129e-54 | -8.615850e-47 |
| Msa0069480 | Msa1138440 | -0.800575 | 1.351483e-48 | -8.615850e-47 |
| Msa0069480 | Msa1146980 | 0.809104 | 2.231328e-50 | -8.615850e-47 |
| Msa0069480 | Msa1170320 | 0.808604 | 2.854005e-50 | -8.615850e-47 |
| Msa0069480 | Msa1170340 | 0.826485 | 2.644110e-54 | -8.615850e-47 |
| Msa0069480 | Msa1179170 | 0.804719 | 1.887623e-49 | -8.615850e-47 |
| Msa0069480 | Msa1186260 | 0.806630 | 7.493082e-50 | -8.615850e-47 |
| Msa0069480 | Msa1205270 | -0.811974 | 5.351310e-51 | -8.615850e-47 |
| Msa0069480 | Msa1214960 | 0.828568 | 8.362441e-55 | -8.615850e-47 |
| Msa0069480 | Msa1225890 | 0.808890 | 2.479890e-50 | -8.615850e-47 |
| Msa0069480 | Msa1269500 | 0.805505 | 1.292111e-49 | -8.615850e-47 |
| Msa0069480 | Msa1297220 | -0.800539 | 1.374610e-48 | -8.615850e-47 |
| Msa0069480 | Msa1319290 | 0.805908 | 1.063677e-49 | -8.615850e-47 |
| Msa0069480 | Msa1321010 | 0.803948 | 2.732333e-49 | -8.615850e-47 |
| Msa0069480 | Msa1322500 | 0.808931 | 2.429667e-50 | -8.615850e-47 |
| Msa0069480 | Msa1323030 | 0.813906 | 2.019557e-51 | -8.615850e-47 |
| Msa0069480 | Msa1323120 | 0.808905 | 2.461672e-50 | -8.615850e-47 |
| Msa0069480 | Msa1323260 | -0.809909 | 1.498486e-50 | -8.615850e-47 |
| Msa0069480 | Msa1343450 | -0.807067 | 6.058100e-50 | -8.615850e-47 |
| Msa0069480 | Msa1343590 | 0.802488 | 5.478271e-49 | -8.615850e-47 |
| Msa0069480 | Msa1344930 | 0.832927 | 7.149570e-56 | -8.615850e-47 |
| Msa0069480 | Msa1355340 | 0.814493 | 1.497747e-51 | -8.615850e-47 |
| Msa0069480 | Msa1365850 | 0.925317 | 2.161481e-90 | -8.615850e-47 |
| Msa0069480 | Msa1371800 | 0.801783 | 7.651873e-49 | -8.615850e-47 |
| Msa0069480 | Msa1373990 | 0.820050 | 8.415276e-53 | -8.615850e-47 |
| Msa0069480 | Msa1376070 | 0.858516 | 7.808869e-63 | -8.615850e-47 |
| Msa0069480 | Msa1377460 | 0.805960 | 1.037316e-49 | -8.615850e-47 |
| Msa0069480 | Msa1377520 | 0.831719 | 1.423281e-55 | -8.615850e-47 |
| Msa0069480 | Msa1380740 | 0.822603 | 2.168270e-53 | -8.615850e-47 |
| Msa0069480 | Msa1395050 | 0.800437 | 1.441969e-48 | -8.615850e-47 |
| Msa0069480 | Msa1407670 | 0.839105 | 1.933767e-57 | -8.615850e-47 |
| Msa0069480 | Msa1411550 | 0.818662 | 1.743788e-52 | -8.615850e-47 |
| Msa0069480 | Msa1413020 | 0.809082 | 2.255713e-50 | -8.615850e-47 |
| Msa0069480 | Msa1420020 | 0.811333 | 7.377139e-51 | -8.615850e-47 |
| Msa0069480 | Msa1421130 | 0.834233 | 3.374915e-56 | -8.615850e-47 |
| Msa0069480 | Msa1422150 | -0.806760 | 7.033468e-50 | -8.615850e-47 |
| Msa0069480 | Msa1445900 | 0.809157 | 2.174251e-50 | -8.615850e-47 |
| Msa0069480 | Msa1449770 | 0.835661 | 1.473355e-56 | -8.615850e-47 |
| Msa0069480 | Msa1459610 | 0.825593 | 4.308560e-54 | -8.615850e-47 |
| Msa0069480 | Msa1461660 | 0.824111 | 9.632855e-54 | -8.615850e-47 |
| Msa0069480 | Msa1466530 | 0.843297 | 1.528253e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0069480 | MtrunA17_Chr1g0200231 | 82.381 | 210 | 12 | 1 | 1 | 210 | 1 | 185 | 3.60e-123 | 346 |
| Msa0069480 | MtrunA17_Chr1g0200221 | 71.564 | 211 | 34 | 2 | 1 | 210 | 1 | 186 | 2.91e-105 | 301 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0069480 | AT2G35830.2 | 56.373 | 204 | 62 | 3 | 7 | 209 | 8 | 185 | 5.40e-76 | 227 |
| Msa0069480 | AT2G35810.2 | 54.854 | 206 | 61 | 4 | 7 | 209 | 22 | 198 | 1.16e-75 | 226 |
| Msa0069480 | AT2G35810.1 | 54.854 | 206 | 61 | 4 | 7 | 209 | 22 | 198 | 1.16e-75 | 226 |
| Msa0069480 | AT2G35820.1 | 52.683 | 205 | 66 | 3 | 7 | 209 | 8 | 183 | 5.59e-72 | 217 |
| Msa0069480 | AT2G35830.1 | 56.311 | 206 | 54 | 5 | 7 | 209 | 8 | 180 | 5.93e-71 | 214 |
| Msa0069480 | AT2G35820.2 | 52.683 | 205 | 66 | 3 | 7 | 209 | 98 | 273 | 2.19e-70 | 216 |
Find 61 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGTATGAAAACAGTAAA+TGG | 0.259839 | 1_2:-37961895 | None:intergenic |
| TCACCAGACAGCCTGGGTTT+TGG | 0.277909 | 1_2:+37960162 | Msa0069480:CDS |
| GGTGGTAATGTTTGGTATCT+TGG | 0.305200 | 1_2:+37961308 | Msa0069480:CDS |
| TGATTCAGATACATAATTAC+TGG | 0.306231 | 1_2:+37961819 | Msa0069480:three_prime_UTR |
| CGGTGAAGCTTGACGAATTT+GGG | 0.309643 | 1_2:-37961464 | None:intergenic |
| GCGGTGAAGCTTGACGAATT+TGG | 0.316031 | 1_2:-37961465 | None:intergenic |
| CGTGAAGGTGGTGACAATTA+AGG | 0.355574 | 1_2:+37960086 | Msa0069480:CDS |
| TGGAAATTTAAGCATGTGTT+TGG | 0.364978 | 1_2:+37961839 | Msa0069480:three_prime_UTR |
| CGAGCCTTCACCAGACAGCC+TGG | 0.372861 | 1_2:+37960155 | Msa0069480:CDS |
| AGAGCATGTCAAATGAATTC+AGG | 0.383024 | 1_2:-37961610 | None:intergenic |
| TACAACATGTTACCATTTCA+AGG | 0.403921 | 1_2:+37961911 | Msa0069480:three_prime_UTR |
| GGTCCATTGGTGGTAATGTT+TGG | 0.421411 | 1_2:+37961300 | Msa0069480:CDS |
| ATCTCACCCAAGGGATTCCC+AGG | 0.438677 | 1_2:+37960205 | Msa0069480:CDS |
| GACCTGAAATCTTGAAAACT+TGG | 0.446401 | 1_2:-37961442 | None:intergenic |
| GGACCAAAACCCAGGCTGTC+TGG | 0.448168 | 1_2:-37960165 | None:intergenic |
| GATGTAAGATTCCATTGAAA+GGG | 0.457158 | 1_2:-37961578 | None:intergenic |
| GAGATCAAGTTGAGCATCAT+GGG | 0.463032 | 1_2:-37960187 | None:intergenic |
| ACTCAGTGCCTTGGGTCCAT+TGG | 0.468229 | 1_2:+37961287 | Msa0069480:CDS |
| GTGATTCTAGAAAACTTTAG+TGG | 0.473787 | 1_2:-37961248 | None:intergenic |
| CAGTGCCTTGGGTCCATTGG+TGG | 0.474720 | 1_2:+37961290 | Msa0069480:CDS |
| ATCTGAATCAATTGAAATGT+TGG | 0.480871 | 1_2:-37961806 | None:intergenic |
| TGAGATCAAGTTGAGCATCA+TGG | 0.496448 | 1_2:-37960188 | None:intergenic |
| CAAATGTGACTCAGTGCCTT+GGG | 0.497185 | 1_2:+37961279 | Msa0069480:CDS |
| CACCGCGGTACATGGCATGC+TGG | 0.498508 | 1_2:+37961482 | Msa0069480:CDS |
| TCATTTGAATCAACAACTGA+TGG | 0.498895 | 1_2:-37961341 | None:intergenic |
| ATGAAAACCTGGGAATCCCT+TGG | 0.505985 | 1_2:-37960212 | None:intergenic |
| TCAAGCTTCACCGCGGTACA+TGG | 0.506906 | 1_2:+37961474 | Msa0069480:CDS |
| TGAAAACCTGGGAATCCCTT+GGG | 0.515492 | 1_2:-37960211 | None:intergenic |
| CCGTAGTCTTTGAAGTTCGC+CGG | 0.533633 | 1_2:-37960123 | None:intergenic |
| CATCATGGGGACCAAAACCC+AGG | 0.536245 | 1_2:-37960173 | None:intergenic |
| GCAAATGTGACTCAGTGCCT+TGG | 0.539728 | 1_2:+37961278 | Msa0069480:CDS |
| ATACCAAACATTACCACCAA+TGG | 0.547916 | 1_2:-37961303 | None:intergenic |
| AGATGTAAGATTCCATTGAA+AGG | 0.548712 | 1_2:-37961579 | None:intergenic |
| GAGCCTTCACCAGACAGCCT+GGG | 0.557955 | 1_2:+37960156 | Msa0069480:CDS |
| ACAACATGTTACCATTTCAA+GGG | 0.558904 | 1_2:+37961912 | Msa0069480:three_prime_UTR |
| AAACCCAGGCTGTCTGGTGA+AGG | 0.563612 | 1_2:-37960159 | None:intergenic |
| AATGAAATCAAAGATGACTC+AGG | 0.574790 | 1_2:+37961359 | Msa0069480:CDS |
| TGATTCTAGAAAACTTTAGT+GGG | 0.575199 | 1_2:-37961247 | None:intergenic |
| TAAGGCGATCGAAGCAACTC+CGG | 0.581240 | 1_2:+37960104 | Msa0069480:CDS |
| TTATGTTCCTCCCACCGTTG+AGG | 0.588581 | 1_2:+37961415 | Msa0069480:CDS |
| CACAACTTTAAGAATGACAA+TGG | 0.590296 | 1_2:+37961739 | Msa0069480:CDS |
| GCTCAACTTGATCTCACCCA+AGG | 0.590549 | 1_2:+37960195 | Msa0069480:CDS |
| TAATGTTTGGTATCTTGGAG+TGG | 0.602976 | 1_2:+37961313 | Msa0069480:CDS |
| AACTTGGACGTCCTCAACGG+TGG | 0.605196 | 1_2:-37961426 | None:intergenic |
| GAACTTCAAAGACTACGGTC+AGG | 0.607170 | 1_2:+37960128 | Msa0069480:CDS |
| AATAATGGAGAGCGTGAAGG+TGG | 0.607965 | 1_2:+37960074 | None:intergenic |
| CTCAACTTGATCTCACCCAA+GGG | 0.620590 | 1_2:+37960196 | Msa0069480:CDS |
| CATTACCACCAATGGACCCA+AGG | 0.621913 | 1_2:-37961295 | None:intergenic |
| AATAATAATGGAGAGCGTGA+AGG | 0.623264 | 1_2:+37960071 | None:intergenic |
| GAAAACTTGGACGTCCTCAA+CGG | 0.628183 | 1_2:-37961429 | None:intergenic |
| CCGGCGAACTTCAAAGACTA+CGG | 0.628730 | 1_2:+37960123 | Msa0069480:CDS |
| TGGACGTCCTCAACGGTGGG+AGG | 0.630671 | 1_2:-37961422 | None:intergenic |
| ACTTGGACGTCCTCAACGGT+GGG | 0.633042 | 1_2:-37961425 | None:intergenic |
| ATGTAAGATTCCATTGAAAG+GGG | 0.634905 | 1_2:-37961577 | None:intergenic |
| ATCGTGCTAGACTTAAATAG+AGG | 0.664302 | 1_2:-37961506 | None:intergenic |
| TCTATTTAAGTCTAGCACGA+TGG | 0.669627 | 1_2:+37961508 | Msa0069480:CDS |
| GACCAGCATGCCATGTACCG+CGG | 0.687313 | 1_2:-37961484 | None:intergenic |
| ACGGTCGTTAAGTCGTGCGG+CGG | 0.689464 | 1_2:+37961386 | Msa0069480:CDS |
| AAAACGGTCGTTAAGTCGTG+CGG | 0.693454 | 1_2:+37961383 | Msa0069480:CDS |
| AGATCAAGTTGAGCATCATG+GGG | 0.694936 | 1_2:-37960186 | None:intergenic |
| AAATTCGTCAAGCTTCACCG+CGG | 0.805303 | 1_2:+37961467 | Msa0069480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTAACATATAGAATT+TGG | - | chr1_2:37960272-37960291 | None:intergenic | 10.0% |
| !!! | ATTTTTTTCACTTTAATTTT+TGG | + | chr1_2:37960294-37960313 | Msa0069480:intron | 10.0% |
| !!! | TTTTTTTCACTTTAATTTTT+GGG | + | chr1_2:37960295-37960314 | Msa0069480:intron | 10.0% |
| !!! | AACTAATTTTAATAATATGT+TGG | - | chr1_2:37961188-37961207 | None:intergenic | 10.0% |
| !!! | TTATTTTGTCATTTTTTTAA+TGG | + | chr1_2:37961663-37961682 | Msa0069480:intron | 10.0% |
| !! | AAAAATTAACATATAGAATT+TGG | - | chr1_2:37960272-37960291 | None:intergenic | 10.0% |
| !!! | ATTTTTTTCACTTTAATTTT+TGG | + | chr1_2:37960294-37960313 | Msa0069480:intron | 10.0% |
| !!! | TTTTTTTCACTTTAATTTTT+GGG | + | chr1_2:37960295-37960314 | Msa0069480:intron | 10.0% |
| !!! | AACTAATTTTAATAATATGT+TGG | - | chr1_2:37961188-37961207 | None:intergenic | 10.0% |
| !!! | TTATTTTGTCATTTTTTTAA+TGG | + | chr1_2:37961663-37961682 | Msa0069480:intron | 10.0% |
| !!! | ATTTTCTTATTTTTGTAAGT+TGG | - | chr1_2:37960244-37960263 | None:intergenic | 15.0% |
| !! | AGGAAATATATATATGATAA+TGG | - | chr1_2:37960682-37960701 | None:intergenic | 15.0% |
| !! | TTAAAGATAACATTTATCTT+TGG | + | chr1_2:37960788-37960807 | Msa0069480:intron | 15.0% |
| !! | AAGGAAACAAAAAAAAAAAA+AGG | - | chr1_2:37960914-37960933 | None:intergenic | 15.0% |
| !!! | TAATTTTAATAATATGTTGG+AGG | - | chr1_2:37961185-37961204 | None:intergenic | 15.0% |
| !!! | ATTTTCTTATTTTTGTAAGT+TGG | - | chr1_2:37960244-37960263 | None:intergenic | 15.0% |
| !! | AGGAAATATATATATGATAA+TGG | - | chr1_2:37960682-37960701 | None:intergenic | 15.0% |
| !! | TTAAAGATAACATTTATCTT+TGG | + | chr1_2:37960788-37960807 | Msa0069480:intron | 15.0% |
| !! | AAGGAAACAAAAAAAAAAAA+AGG | - | chr1_2:37960914-37960933 | None:intergenic | 15.0% |
| !!! | TAATTTTAATAATATGTTGG+AGG | - | chr1_2:37961185-37961204 | None:intergenic | 15.0% |
| !! | TCTTAGAAAAAATGAAGAAT+AGG | + | chr1_2:37960470-37960489 | Msa0069480:intron | 20.0% |
| !! | GAACTAGTAAAATTTATTAG+AGG | + | chr1_2:37960503-37960522 | Msa0069480:intron | 20.0% |
| !!! | CCAATAATATATAGTTTTGA+CGG | - | chr1_2:37960587-37960606 | None:intergenic | 20.0% |
| !! | AATGAACTGATATGTTAAAA+AGG | - | chr1_2:37960646-37960665 | None:intergenic | 20.0% |
| !!! | AAAATTAGTTTGTGTTTTGT+AGG | + | chr1_2:37961198-37961217 | Msa0069480:intron | 20.0% |
| !! | TGAAAAACTTACATTTGTAT+TGG | - | chr1_2:37961555-37961574 | None:intergenic | 20.0% |
| !!! | AATACAAATGTAAGTTTTTC+AGG | + | chr1_2:37961554-37961573 | Msa0069480:CDS | 20.0% |
| !!! | TTGTCATTTTTTTAATGGTT+TGG | + | chr1_2:37961668-37961687 | Msa0069480:intron | 20.0% |
| !! | TCTTAGAAAAAATGAAGAAT+AGG | + | chr1_2:37960470-37960489 | Msa0069480:intron | 20.0% |
| !! | GAACTAGTAAAATTTATTAG+AGG | + | chr1_2:37960503-37960522 | Msa0069480:intron | 20.0% |
| !!! | CCAATAATATATAGTTTTGA+CGG | - | chr1_2:37960587-37960606 | None:intergenic | 20.0% |
| !! | AATGAACTGATATGTTAAAA+AGG | - | chr1_2:37960646-37960665 | None:intergenic | 20.0% |
| !!! | AAAATTAGTTTGTGTTTTGT+AGG | + | chr1_2:37961198-37961217 | Msa0069480:intron | 20.0% |
| !! | TGAAAAACTTACATTTGTAT+TGG | - | chr1_2:37961555-37961574 | None:intergenic | 20.0% |
| !!! | AATACAAATGTAAGTTTTTC+AGG | + | chr1_2:37961554-37961573 | Msa0069480:CDS | 20.0% |
| !!! | TTGTCATTTTTTTAATGGTT+TGG | + | chr1_2:37961668-37961687 | Msa0069480:intron | 20.0% |
| !!! | TTTCACTTTAATTTTTGGGT+TGG | + | chr1_2:37960299-37960318 | Msa0069480:intron | 25.0% |
| ! | CCGTCAAAACTATATATTAT+TGG | + | chr1_2:37960584-37960603 | Msa0069480:intron | 25.0% |
| !! | ATCTAAGACATACTACAAAA+CGG | - | chr1_2:37960623-37960642 | None:intergenic | 25.0% |
| ! | CATTATATTTCACACGAATA+AGG | - | chr1_2:37960702-37960721 | None:intergenic | 25.0% |
| ! | AAATGTGACGATTATTAGTA+TGG | + | chr1_2:37960825-37960844 | Msa0069480:intron | 25.0% |
| ! | AATGTGACGATTATTAGTAT+GGG | + | chr1_2:37960826-37960845 | Msa0069480:intron | 25.0% |
| ! | TTTATCCATATAGCATCAAA+AGG | - | chr1_2:37960933-37960952 | None:intergenic | 25.0% |
| ! | TATATACTACCCTATTATCT+TGG | + | chr1_2:37960959-37960978 | Msa0069480:intron | 25.0% |
| !!! | AATTTTGCTATAAAGTAGCT+TGG | - | chr1_2:37960998-37961017 | None:intergenic | 25.0% |
| ! | TACTTTATAGCAAAATTGAG+AGG | + | chr1_2:37961001-37961020 | Msa0069480:intron | 25.0% |
| !! | TGATTCTAGAAAACTTTAGT+GGG | - | chr1_2:37961250-37961269 | None:intergenic | 25.0% |
| !!! | TGCTTTTTTATTATGTGTAC+AGG | + | chr1_2:37961699-37961718 | Msa0069480:intron | 25.0% |
| ! | ATCTGAATCAATTGAAATGT+TGG | - | chr1_2:37961809-37961828 | None:intergenic | 25.0% |
| ! | TGATTCAGATACATAATTAC+TGG | + | chr1_2:37961819-37961838 | Msa0069480:three_prime_UTR | 25.0% |
| ! | TGTTGTATGAAAACAGTAAA+TGG | - | chr1_2:37961898-37961917 | None:intergenic | 25.0% |
| !!! | TTTCACTTTAATTTTTGGGT+TGG | + | chr1_2:37960299-37960318 | Msa0069480:intron | 25.0% |
| ! | CCGTCAAAACTATATATTAT+TGG | + | chr1_2:37960584-37960603 | Msa0069480:intron | 25.0% |
| !! | ATCTAAGACATACTACAAAA+CGG | - | chr1_2:37960623-37960642 | None:intergenic | 25.0% |
| ! | CATTATATTTCACACGAATA+AGG | - | chr1_2:37960702-37960721 | None:intergenic | 25.0% |
| ! | AAATGTGACGATTATTAGTA+TGG | + | chr1_2:37960825-37960844 | Msa0069480:intron | 25.0% |
| ! | AATGTGACGATTATTAGTAT+GGG | + | chr1_2:37960826-37960845 | Msa0069480:intron | 25.0% |
| ! | TTTATCCATATAGCATCAAA+AGG | - | chr1_2:37960933-37960952 | None:intergenic | 25.0% |
| ! | TATATACTACCCTATTATCT+TGG | + | chr1_2:37960959-37960978 | Msa0069480:intron | 25.0% |
| !!! | AATTTTGCTATAAAGTAGCT+TGG | - | chr1_2:37960998-37961017 | None:intergenic | 25.0% |
| ! | TACTTTATAGCAAAATTGAG+AGG | + | chr1_2:37961001-37961020 | Msa0069480:intron | 25.0% |
| !! | TGATTCTAGAAAACTTTAGT+GGG | - | chr1_2:37961250-37961269 | None:intergenic | 25.0% |
| !!! | TGCTTTTTTATTATGTGTAC+AGG | + | chr1_2:37961699-37961718 | Msa0069480:intron | 25.0% |
| ! | ATCTGAATCAATTGAAATGT+TGG | - | chr1_2:37961809-37961828 | None:intergenic | 25.0% |
| ! | TGATTCAGATACATAATTAC+TGG | + | chr1_2:37961819-37961838 | Msa0069480:three_prime_UTR | 25.0% |
| ! | TGTTGTATGAAAACAGTAAA+TGG | - | chr1_2:37961898-37961917 | None:intergenic | 25.0% |
| TTGGTGAAATATGAAAACCT+GGG | - | chr1_2:37960225-37960244 | None:intergenic | 30.0% | |
| TACCTATGATTAAGATCGAA+CGG | - | chr1_2:37960371-37960390 | None:intergenic | 30.0% | |
| GATTATTAGTATGGGACATA+GGG | + | chr1_2:37960834-37960853 | Msa0069480:intron | 30.0% | |
| ! | TGTTTCCTTTTGATGCTATA+TGG | + | chr1_2:37960925-37960944 | Msa0069480:intron | 30.0% |
| TATCAGTTAAATTGAGCTGA+TGG | - | chr1_2:37961102-37961121 | None:intergenic | 30.0% | |
| TAATAATATGTTGGAGGACT+TGG | - | chr1_2:37961179-37961198 | None:intergenic | 30.0% | |
| ! | GTGATTCTAGAAAACTTTAG+TGG | - | chr1_2:37961251-37961270 | None:intergenic | 30.0% |
| TCATTTGAATCAACAACTGA+TGG | - | chr1_2:37961344-37961363 | None:intergenic | 30.0% | |
| AATGAAATCAAAGATGACTC+AGG | + | chr1_2:37961359-37961378 | Msa0069480:CDS | 30.0% | |
| ATGTAAGATTCCATTGAAAG+GGG | - | chr1_2:37961580-37961599 | None:intergenic | 30.0% | |
| GATGTAAGATTCCATTGAAA+GGG | - | chr1_2:37961581-37961600 | None:intergenic | 30.0% | |
| AGATGTAAGATTCCATTGAA+AGG | - | chr1_2:37961582-37961601 | None:intergenic | 30.0% | |
| ! | CACAACTTTAAGAATGACAA+TGG | + | chr1_2:37961739-37961758 | Msa0069480:CDS | 30.0% |
| TGGAAATTTAAGCATGTGTT+TGG | + | chr1_2:37961839-37961858 | Msa0069480:three_prime_UTR | 30.0% | |
| TTGGTGAAATATGAAAACCT+GGG | - | chr1_2:37960225-37960244 | None:intergenic | 30.0% | |
| TACCTATGATTAAGATCGAA+CGG | - | chr1_2:37960371-37960390 | None:intergenic | 30.0% | |
| GATTATTAGTATGGGACATA+GGG | + | chr1_2:37960834-37960853 | Msa0069480:intron | 30.0% | |
| ! | TGTTTCCTTTTGATGCTATA+TGG | + | chr1_2:37960925-37960944 | Msa0069480:intron | 30.0% |
| TATCAGTTAAATTGAGCTGA+TGG | - | chr1_2:37961102-37961121 | None:intergenic | 30.0% | |
| TAATAATATGTTGGAGGACT+TGG | - | chr1_2:37961179-37961198 | None:intergenic | 30.0% | |
| ! | GTGATTCTAGAAAACTTTAG+TGG | - | chr1_2:37961251-37961270 | None:intergenic | 30.0% |
| TCATTTGAATCAACAACTGA+TGG | - | chr1_2:37961344-37961363 | None:intergenic | 30.0% | |
| AATGAAATCAAAGATGACTC+AGG | + | chr1_2:37961359-37961378 | Msa0069480:CDS | 30.0% | |
| ATGTAAGATTCCATTGAAAG+GGG | - | chr1_2:37961580-37961599 | None:intergenic | 30.0% | |
| GATGTAAGATTCCATTGAAA+GGG | - | chr1_2:37961581-37961600 | None:intergenic | 30.0% | |
| AGATGTAAGATTCCATTGAA+AGG | - | chr1_2:37961582-37961601 | None:intergenic | 30.0% | |
| ! | CACAACTTTAAGAATGACAA+TGG | + | chr1_2:37961739-37961758 | Msa0069480:CDS | 30.0% |
| TGGAAATTTAAGCATGTGTT+TGG | + | chr1_2:37961839-37961858 | Msa0069480:three_prime_UTR | 30.0% | |
| ! | GTTGGTGAAATATGAAAACC+TGG | - | chr1_2:37960226-37960245 | None:intergenic | 35.0% |
| !! | TTTGGGTTGGATTGATCATT+TGG | + | chr1_2:37960312-37960331 | Msa0069480:intron | 35.0% |
| AACCGTTCGATCTTAATCAT+AGG | + | chr1_2:37960366-37960385 | Msa0069480:intron | 35.0% | |
| CGATTATTAGTATGGGACAT+AGG | + | chr1_2:37960833-37960852 | Msa0069480:intron | 35.0% | |
| AGTACCAAGTTTACACTGTT+TGG | + | chr1_2:37960857-37960876 | Msa0069480:intron | 35.0% | |
| GTACCAAGTTTACACTGTTT+GGG | + | chr1_2:37960858-37960877 | Msa0069480:intron | 35.0% | |
| ! | TTTGCTATAAAGTAGCTTGG+TGG | - | chr1_2:37960995-37961014 | None:intergenic | 35.0% |
| TATAGCAAAATTGAGAGGCT+AGG | + | chr1_2:37961006-37961025 | Msa0069480:intron | 35.0% | |
| TGCAAAGTTTCTTTCTTCGA+TGG | - | chr1_2:37961046-37961065 | None:intergenic | 35.0% | |
| ATACCAAACATTACCACCAA+TGG | - | chr1_2:37961306-37961325 | None:intergenic | 35.0% | |
| TAATGTTTGGTATCTTGGAG+TGG | + | chr1_2:37961313-37961332 | Msa0069480:CDS | 35.0% | |
| CAAAGATGACTCAGGAAAAA+CGG | + | chr1_2:37961367-37961386 | Msa0069480:CDS | 35.0% | |
| !! | GTCCAAGTTTTCAAGATTTC+AGG | + | chr1_2:37961440-37961459 | Msa0069480:CDS | 35.0% |
| GACCTGAAATCTTGAAAACT+TGG | - | chr1_2:37961445-37961464 | None:intergenic | 35.0% | |
| ATCGTGCTAGACTTAAATAG+AGG | - | chr1_2:37961509-37961528 | None:intergenic | 35.0% | |
| TCTATTTAAGTCTAGCACGA+TGG | + | chr1_2:37961508-37961527 | Msa0069480:CDS | 35.0% | |
| !! | GGACTTTTACAATCTAGAGT+TGG | + | chr1_2:37961529-37961548 | Msa0069480:CDS | 35.0% |
| AGAGCATGTCAAATGAATTC+AGG | - | chr1_2:37961613-37961632 | None:intergenic | 35.0% | |
| !! | ATGCTCTTTAGAGTAAGACA+TGG | + | chr1_2:37961626-37961645 | Msa0069480:intron | 35.0% |
| !! | TGCTCTTTAGAGTAAGACAT+GGG | + | chr1_2:37961627-37961646 | Msa0069480:intron | 35.0% |
| ! | GTTGGTGAAATATGAAAACC+TGG | - | chr1_2:37960226-37960245 | None:intergenic | 35.0% |
| !! | TTTGGGTTGGATTGATCATT+TGG | + | chr1_2:37960312-37960331 | Msa0069480:intron | 35.0% |
| AACCGTTCGATCTTAATCAT+AGG | + | chr1_2:37960366-37960385 | Msa0069480:intron | 35.0% | |
| CGATTATTAGTATGGGACAT+AGG | + | chr1_2:37960833-37960852 | Msa0069480:intron | 35.0% | |
| AGTACCAAGTTTACACTGTT+TGG | + | chr1_2:37960857-37960876 | Msa0069480:intron | 35.0% | |
| GTACCAAGTTTACACTGTTT+GGG | + | chr1_2:37960858-37960877 | Msa0069480:intron | 35.0% | |
| ! | TTTGCTATAAAGTAGCTTGG+TGG | - | chr1_2:37960995-37961014 | None:intergenic | 35.0% |
| TATAGCAAAATTGAGAGGCT+AGG | + | chr1_2:37961006-37961025 | Msa0069480:intron | 35.0% | |
| TGCAAAGTTTCTTTCTTCGA+TGG | - | chr1_2:37961046-37961065 | None:intergenic | 35.0% | |
| ATACCAAACATTACCACCAA+TGG | - | chr1_2:37961306-37961325 | None:intergenic | 35.0% | |
| TAATGTTTGGTATCTTGGAG+TGG | + | chr1_2:37961313-37961332 | Msa0069480:CDS | 35.0% | |
| CAAAGATGACTCAGGAAAAA+CGG | + | chr1_2:37961367-37961386 | Msa0069480:CDS | 35.0% | |
| !! | GTCCAAGTTTTCAAGATTTC+AGG | + | chr1_2:37961440-37961459 | Msa0069480:CDS | 35.0% |
| GACCTGAAATCTTGAAAACT+TGG | - | chr1_2:37961445-37961464 | None:intergenic | 35.0% | |
| ATCGTGCTAGACTTAAATAG+AGG | - | chr1_2:37961509-37961528 | None:intergenic | 35.0% | |
| TCTATTTAAGTCTAGCACGA+TGG | + | chr1_2:37961508-37961527 | Msa0069480:CDS | 35.0% | |
| !! | GGACTTTTACAATCTAGAGT+TGG | + | chr1_2:37961529-37961548 | Msa0069480:CDS | 35.0% |
| AGAGCATGTCAAATGAATTC+AGG | - | chr1_2:37961613-37961632 | None:intergenic | 35.0% | |
| !! | ATGCTCTTTAGAGTAAGACA+TGG | + | chr1_2:37961626-37961645 | Msa0069480:intron | 35.0% |
| !! | TGCTCTTTAGAGTAAGACAT+GGG | + | chr1_2:37961627-37961646 | Msa0069480:intron | 35.0% |
| !! | AGATCAAGTTGAGCATCATG+GGG | - | chr1_2:37960189-37960208 | None:intergenic | 40.0% |
| !! | GAGATCAAGTTGAGCATCAT+GGG | - | chr1_2:37960190-37960209 | None:intergenic | 40.0% |
| !! | TGAGATCAAGTTGAGCATCA+TGG | - | chr1_2:37960191-37960210 | None:intergenic | 40.0% |
| CAACCCAAACAGTGTAAACT+TGG | - | chr1_2:37960864-37960883 | None:intergenic | 40.0% | |
| ! | ATCTTGAGATGAAGAGCACA+AGG | + | chr1_2:37960885-37960904 | Msa0069480:intron | 40.0% |
| GGGTGAATGCCAAGATAATA+GGG | - | chr1_2:37960971-37960990 | None:intergenic | 40.0% | |
| TGGGTGAATGCCAAGATAAT+AGG | - | chr1_2:37960972-37960991 | None:intergenic | 40.0% | |
| ! | CTATAAAGTAGCTTGGTGGT+GGG | - | chr1_2:37960991-37961010 | None:intergenic | 40.0% |
| ! | GGTGGTAATGTTTGGTATCT+TGG | + | chr1_2:37961308-37961327 | Msa0069480:CDS | 40.0% |
| !! | AGATCAAGTTGAGCATCATG+GGG | - | chr1_2:37960189-37960208 | None:intergenic | 40.0% |
| !! | GAGATCAAGTTGAGCATCAT+GGG | - | chr1_2:37960190-37960209 | None:intergenic | 40.0% |
| !! | TGAGATCAAGTTGAGCATCA+TGG | - | chr1_2:37960191-37960210 | None:intergenic | 40.0% |
| CAACCCAAACAGTGTAAACT+TGG | - | chr1_2:37960864-37960883 | None:intergenic | 40.0% | |
| ! | ATCTTGAGATGAAGAGCACA+AGG | + | chr1_2:37960885-37960904 | Msa0069480:intron | 40.0% |
| GGGTGAATGCCAAGATAATA+GGG | - | chr1_2:37960971-37960990 | None:intergenic | 40.0% | |
| TGGGTGAATGCCAAGATAAT+AGG | - | chr1_2:37960972-37960991 | None:intergenic | 40.0% | |
| ! | CTATAAAGTAGCTTGGTGGT+GGG | - | chr1_2:37960991-37961010 | None:intergenic | 40.0% |
| ! | GGTGGTAATGTTTGGTATCT+TGG | + | chr1_2:37961308-37961327 | Msa0069480:CDS | 40.0% |
| CGTGAAGGTGGTGACAATTA+AGG | + | chr1_2:37960086-37960105 | Msa0069480:CDS | 45.0% | |
| GAACTTCAAAGACTACGGTC+AGG | + | chr1_2:37960128-37960147 | Msa0069480:CDS | 45.0% | |
| CTCAACTTGATCTCACCCAA+GGG | + | chr1_2:37960196-37960215 | Msa0069480:CDS | 45.0% | |
| TGAAAACCTGGGAATCCCTT+GGG | - | chr1_2:37960214-37960233 | None:intergenic | 45.0% | |
| ATGAAAACCTGGGAATCCCT+TGG | - | chr1_2:37960215-37960234 | None:intergenic | 45.0% | |
| ! | GCTATAAAGTAGCTTGGTGG+TGG | - | chr1_2:37960992-37961011 | None:intergenic | 45.0% |
| AGCAAAATTGAGAGGCTAGG+AGG | + | chr1_2:37961009-37961028 | Msa0069480:intron | 45.0% | |
| TGAGAGGCTAGGAGGAATAT+TGG | + | chr1_2:37961017-37961036 | Msa0069480:intron | 45.0% | |
| CAAATGTGACTCAGTGCCTT+GGG | + | chr1_2:37961279-37961298 | Msa0069480:CDS | 45.0% | |
| ! | GGTCCATTGGTGGTAATGTT+TGG | + | chr1_2:37961300-37961319 | Msa0069480:CDS | 45.0% |
| AAAACGGTCGTTAAGTCGTG+CGG | + | chr1_2:37961383-37961402 | Msa0069480:CDS | 45.0% | |
| GAAAACTTGGACGTCCTCAA+CGG | - | chr1_2:37961432-37961451 | None:intergenic | 45.0% | |
| CGGTGAAGCTTGACGAATTT+GGG | - | chr1_2:37961467-37961486 | None:intergenic | 45.0% | |
| AAATTCGTCAAGCTTCACCG+CGG | + | chr1_2:37961467-37961486 | Msa0069480:CDS | 45.0% | |
| !!! | GTTTTTCAGGCCCCTTTCAA+TGG | + | chr1_2:37961567-37961586 | Msa0069480:CDS | 45.0% |
| CGTGAAGGTGGTGACAATTA+AGG | + | chr1_2:37960086-37960105 | Msa0069480:CDS | 45.0% | |
| GAACTTCAAAGACTACGGTC+AGG | + | chr1_2:37960128-37960147 | Msa0069480:CDS | 45.0% | |
| CTCAACTTGATCTCACCCAA+GGG | + | chr1_2:37960196-37960215 | Msa0069480:CDS | 45.0% | |
| TGAAAACCTGGGAATCCCTT+GGG | - | chr1_2:37960214-37960233 | None:intergenic | 45.0% | |
| ATGAAAACCTGGGAATCCCT+TGG | - | chr1_2:37960215-37960234 | None:intergenic | 45.0% | |
| ! | GCTATAAAGTAGCTTGGTGG+TGG | - | chr1_2:37960992-37961011 | None:intergenic | 45.0% |
| AGCAAAATTGAGAGGCTAGG+AGG | + | chr1_2:37961009-37961028 | Msa0069480:intron | 45.0% | |
| TGAGAGGCTAGGAGGAATAT+TGG | + | chr1_2:37961017-37961036 | Msa0069480:intron | 45.0% | |
| CAAATGTGACTCAGTGCCTT+GGG | + | chr1_2:37961279-37961298 | Msa0069480:CDS | 45.0% | |
| ! | GGTCCATTGGTGGTAATGTT+TGG | + | chr1_2:37961300-37961319 | Msa0069480:CDS | 45.0% |
| AAAACGGTCGTTAAGTCGTG+CGG | + | chr1_2:37961383-37961402 | Msa0069480:CDS | 45.0% | |
| GAAAACTTGGACGTCCTCAA+CGG | - | chr1_2:37961432-37961451 | None:intergenic | 45.0% | |
| CGGTGAAGCTTGACGAATTT+GGG | - | chr1_2:37961467-37961486 | None:intergenic | 45.0% | |
| AAATTCGTCAAGCTTCACCG+CGG | + | chr1_2:37961467-37961486 | Msa0069480:CDS | 45.0% | |
| !!! | GTTTTTCAGGCCCCTTTCAA+TGG | + | chr1_2:37961567-37961586 | Msa0069480:CDS | 45.0% |
| TAAGGCGATCGAAGCAACTC+CGG | + | chr1_2:37960104-37960123 | Msa0069480:CDS | 50.0% | |
| !! | CCGTAGTCTTTGAAGTTCGC+CGG | - | chr1_2:37960126-37960145 | None:intergenic | 50.0% |
| CCGGCGAACTTCAAAGACTA+CGG | + | chr1_2:37960123-37960142 | Msa0069480:CDS | 50.0% | |
| GCTCAACTTGATCTCACCCA+AGG | + | chr1_2:37960195-37960214 | Msa0069480:CDS | 50.0% | |
| GCAAATGTGACTCAGTGCCT+TGG | + | chr1_2:37961278-37961297 | Msa0069480:CDS | 50.0% | |
| CATTACCACCAATGGACCCA+AGG | - | chr1_2:37961298-37961317 | None:intergenic | 50.0% | |
| TTATGTTCCTCCCACCGTTG+AGG | + | chr1_2:37961415-37961434 | Msa0069480:CDS | 50.0% | |
| GCGGTGAAGCTTGACGAATT+TGG | - | chr1_2:37961468-37961487 | None:intergenic | 50.0% | |
| TAAGGCGATCGAAGCAACTC+CGG | + | chr1_2:37960104-37960123 | Msa0069480:CDS | 50.0% | |
| !! | CCGTAGTCTTTGAAGTTCGC+CGG | - | chr1_2:37960126-37960145 | None:intergenic | 50.0% |
| CCGGCGAACTTCAAAGACTA+CGG | + | chr1_2:37960123-37960142 | Msa0069480:CDS | 50.0% | |
| GCTCAACTTGATCTCACCCA+AGG | + | chr1_2:37960195-37960214 | Msa0069480:CDS | 50.0% | |
| GCAAATGTGACTCAGTGCCT+TGG | + | chr1_2:37961278-37961297 | Msa0069480:CDS | 50.0% | |
| CATTACCACCAATGGACCCA+AGG | - | chr1_2:37961298-37961317 | None:intergenic | 50.0% | |
| TTATGTTCCTCCCACCGTTG+AGG | + | chr1_2:37961415-37961434 | Msa0069480:CDS | 50.0% | |
| GCGGTGAAGCTTGACGAATT+TGG | - | chr1_2:37961468-37961487 | None:intergenic | 50.0% | |
| AAACCCAGGCTGTCTGGTGA+AGG | - | chr1_2:37960162-37960181 | None:intergenic | 55.0% | |
| ! | TCACCAGACAGCCTGGGTTT+TGG | + | chr1_2:37960162-37960181 | Msa0069480:CDS | 55.0% |
| CATCATGGGGACCAAAACCC+AGG | - | chr1_2:37960176-37960195 | None:intergenic | 55.0% | |
| ATCTCACCCAAGGGATTCCC+AGG | + | chr1_2:37960205-37960224 | Msa0069480:CDS | 55.0% | |
| ACTCAGTGCCTTGGGTCCAT+TGG | + | chr1_2:37961287-37961306 | Msa0069480:CDS | 55.0% | |
| ACTTGGACGTCCTCAACGGT+GGG | - | chr1_2:37961428-37961447 | None:intergenic | 55.0% | |
| AACTTGGACGTCCTCAACGG+TGG | - | chr1_2:37961429-37961448 | None:intergenic | 55.0% | |
| TCAAGCTTCACCGCGGTACA+TGG | + | chr1_2:37961474-37961493 | Msa0069480:CDS | 55.0% | |
| AAACCCAGGCTGTCTGGTGA+AGG | - | chr1_2:37960162-37960181 | None:intergenic | 55.0% | |
| ! | TCACCAGACAGCCTGGGTTT+TGG | + | chr1_2:37960162-37960181 | Msa0069480:CDS | 55.0% |
| CATCATGGGGACCAAAACCC+AGG | - | chr1_2:37960176-37960195 | None:intergenic | 55.0% | |
| ATCTCACCCAAGGGATTCCC+AGG | + | chr1_2:37960205-37960224 | Msa0069480:CDS | 55.0% | |
| ACTCAGTGCCTTGGGTCCAT+TGG | + | chr1_2:37961287-37961306 | Msa0069480:CDS | 55.0% | |
| ACTTGGACGTCCTCAACGGT+GGG | - | chr1_2:37961428-37961447 | None:intergenic | 55.0% | |
| AACTTGGACGTCCTCAACGG+TGG | - | chr1_2:37961429-37961448 | None:intergenic | 55.0% | |
| TCAAGCTTCACCGCGGTACA+TGG | + | chr1_2:37961474-37961493 | Msa0069480:CDS | 55.0% | |
| GAGCCTTCACCAGACAGCCT+GGG | + | chr1_2:37960156-37960175 | Msa0069480:CDS | 60.0% | |
| GGACCAAAACCCAGGCTGTC+TGG | - | chr1_2:37960168-37960187 | None:intergenic | 60.0% | |
| CAGTGCCTTGGGTCCATTGG+TGG | + | chr1_2:37961290-37961309 | Msa0069480:CDS | 60.0% | |
| ACGGTCGTTAAGTCGTGCGG+CGG | + | chr1_2:37961386-37961405 | Msa0069480:CDS | 60.0% | |
| GACCAGCATGCCATGTACCG+CGG | - | chr1_2:37961487-37961506 | None:intergenic | 60.0% | |
| GAGCCTTCACCAGACAGCCT+GGG | + | chr1_2:37960156-37960175 | Msa0069480:CDS | 60.0% | |
| GGACCAAAACCCAGGCTGTC+TGG | - | chr1_2:37960168-37960187 | None:intergenic | 60.0% | |
| CAGTGCCTTGGGTCCATTGG+TGG | + | chr1_2:37961290-37961309 | Msa0069480:CDS | 60.0% | |
| ACGGTCGTTAAGTCGTGCGG+CGG | + | chr1_2:37961386-37961405 | Msa0069480:CDS | 60.0% | |
| GACCAGCATGCCATGTACCG+CGG | - | chr1_2:37961487-37961506 | None:intergenic | 60.0% | |
| CGAGCCTTCACCAGACAGCC+TGG | + | chr1_2:37960155-37960174 | Msa0069480:CDS | 65.0% | |
| TGGACGTCCTCAACGGTGGG+AGG | - | chr1_2:37961425-37961444 | None:intergenic | 65.0% | |
| CACCGCGGTACATGGCATGC+TGG | + | chr1_2:37961482-37961501 | Msa0069480:CDS | 65.0% | |
| CGAGCCTTCACCAGACAGCC+TGG | + | chr1_2:37960155-37960174 | Msa0069480:CDS | 65.0% | |
| TGGACGTCCTCAACGGTGGG+AGG | - | chr1_2:37961425-37961444 | None:intergenic | 65.0% | |
| CACCGCGGTACATGGCATGC+TGG | + | chr1_2:37961482-37961501 | Msa0069480:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 37960078 | 37961932 | 37960078 | ID=Msa0069480;Name=Msa0069480 |
| chr1_2 | mRNA | 37960078 | 37961932 | 37960078 | ID=Msa0069480-mRNA-1;Parent=Msa0069480;Name=Msa0069480-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0.5|0.33|1|1|1|3|146|210 |
| chr1_2 | exon | 37960078 | 37960226 | 37960078 | ID=Msa0069480-mRNA-1:exon:11981;Parent=Msa0069480-mRNA-1 |
| chr1_2 | exon | 37961220 | 37961637 | 37961220 | ID=Msa0069480-mRNA-1:exon:11982;Parent=Msa0069480-mRNA-1 |
| chr1_2 | exon | 37961721 | 37961932 | 37961721 | ID=Msa0069480-mRNA-1:exon:11983;Parent=Msa0069480-mRNA-1 |
| chr1_2 | CDS | 37960078 | 37960226 | 37960078 | ID=Msa0069480-mRNA-1:cds;Parent=Msa0069480-mRNA-1 |
| chr1_2 | CDS | 37961220 | 37961637 | 37961220 | ID=Msa0069480-mRNA-1:cds;Parent=Msa0069480-mRNA-1 |
| chr1_2 | CDS | 37961721 | 37961786 | 37961721 | ID=Msa0069480-mRNA-1:cds;Parent=Msa0069480-mRNA-1 |
| chr1_2 | three_prime_UTR | 37961787 | 37961932 | 37961787 | ID=Msa0069480-mRNA-1:three_prime_utr;Parent=Msa0069480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
