Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0711260 | XP_003610656.3 | 95.337 | 579 | 26 | 1 | 1 | 578 | 9 | 587 | 0.0 | 1123 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0711260 | sp|O81032|GGLO6_ARATH | 63.937 | 574 | 201 | 3 | 6 | 573 | 16 | 589 | 0.0 | 781 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0711260 | A0A396HPJ0 | 95.337 | 579 | 26 | 1 | 1 | 578 | 9 | 587 | 0.0 | 1123 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006080 | Msa0711260 | 0.802388 | 5.745837e-49 | -8.615850e-47 |
Msa0009530 | Msa0711260 | -0.805313 | 1.417564e-49 | -8.615850e-47 |
Msa0010150 | Msa0711260 | 0.833621 | 4.801263e-56 | -8.615850e-47 |
Msa0011060 | Msa0711260 | -0.803443 | 3.477538e-49 | -8.615850e-47 |
Msa0013040 | Msa0711260 | 0.814444 | 1.535900e-51 | -8.615850e-47 |
Msa0013270 | Msa0711260 | 0.806899 | 6.575175e-50 | -8.615850e-47 |
Msa0014590 | Msa0711260 | 0.841453 | 4.707499e-58 | -8.615850e-47 |
Msa0017710 | Msa0711260 | 0.813417 | 2.587229e-51 | -8.615850e-47 |
Msa0025700 | Msa0711260 | 0.807437 | 5.057559e-50 | -8.615850e-47 |
Msa0027860 | Msa0711260 | 0.805398 | 1.360673e-49 | -8.615850e-47 |
Msa0033120 | Msa0711260 | 0.801321 | 9.515495e-49 | -8.615850e-47 |
Msa0033180 | Msa0711260 | 0.800627 | 1.318767e-48 | -8.615850e-47 |
Msa0034100 | Msa0711260 | -0.805266 | 1.450051e-49 | -8.615850e-47 |
Msa0040210 | Msa0711260 | 0.816074 | 6.669042e-52 | -8.615850e-47 |
Msa0040360 | Msa0711260 | 0.802852 | 4.607609e-49 | -8.615850e-47 |
Msa0046390 | Msa0711260 | 0.801818 | 7.523243e-49 | -8.615850e-47 |
Msa0054790 | Msa0711260 | 0.804804 | 1.811960e-49 | -8.615850e-47 |
Msa0059880 | Msa0711260 | 0.824803 | 6.623585e-54 | -8.615850e-47 |
Msa0062010 | Msa0711260 | 0.822270 | 2.591651e-53 | -8.615850e-47 |
Msa0063540 | Msa0711260 | 0.844991 | 5.365812e-59 | -8.615850e-47 |
Msa0072390 | Msa0711260 | -0.802191 | 6.307399e-49 | -8.615850e-47 |
Msa0073270 | Msa0711260 | 0.813816 | 2.113569e-51 | -8.615850e-47 |
Msa0079830 | Msa0711260 | 0.804352 | 2.251403e-49 | -8.615850e-47 |
Msa0087900 | Msa0711260 | 0.806551 | 7.785737e-50 | -8.615850e-47 |
Msa0108350 | Msa0711260 | 0.847669 | 9.988703e-60 | -8.615850e-47 |
Msa0120050 | Msa0711260 | 0.821240 | 4.486190e-53 | -8.615850e-47 |
Msa0604200 | Msa0711260 | 0.813061 | 3.096410e-51 | -8.615850e-47 |
Msa0604280 | Msa0711260 | 0.801270 | 9.746823e-49 | -8.615850e-47 |
Msa0605400 | Msa0711260 | 0.811035 | 8.561242e-51 | -8.615850e-47 |
Msa0609460 | Msa0711260 | 0.823779 | 1.152595e-53 | -8.615850e-47 |
Msa0610190 | Msa0711260 | 0.831123 | 1.995373e-55 | -8.615850e-47 |
Msa0624930 | Msa0711260 | 0.805446 | 1.329466e-49 | -8.615850e-47 |
Msa0628140 | Msa0711260 | 0.806450 | 8.176791e-50 | -8.615850e-47 |
Msa0631700 | Msa0711260 | 0.837322 | 5.564407e-57 | -8.615850e-47 |
Msa0634290 | Msa0711260 | 0.808903 | 2.463833e-50 | -8.615850e-47 |
Msa0639410 | Msa0711260 | 0.806047 | 9.942705e-50 | -8.615850e-47 |
Msa0643190 | Msa0711260 | 0.816910 | 4.334250e-52 | -8.615850e-47 |
Msa0643840 | Msa0711260 | 0.855644 | 5.493595e-62 | -8.615850e-47 |
Msa0645370 | Msa0711260 | 0.805410 | 1.353058e-49 | -8.615850e-47 |
Msa0647300 | Msa0711260 | 0.808024 | 3.795337e-50 | -8.615850e-47 |
Msa0650100 | Msa0711260 | 0.815380 | 9.525702e-52 | -8.615850e-47 |
Msa0659020 | Msa0711260 | -0.810943 | 8.962351e-51 | -8.615850e-47 |
Msa0667600 | Msa0711260 | 0.813814 | 2.115571e-51 | -8.615850e-47 |
Msa0670360 | Msa0711260 | 0.845853 | 3.134250e-59 | -8.615850e-47 |
Msa0671400 | Msa0711260 | 0.821912 | 3.136630e-53 | -8.615850e-47 |
Msa0671640 | Msa0711260 | 0.853268 | 2.674028e-61 | -8.615850e-47 |
Msa0678620 | Msa0711260 | 0.816357 | 5.766419e-52 | -8.615850e-47 |
Msa0686830 | Msa0711260 | 0.806854 | 6.720301e-50 | -8.615850e-47 |
Msa0687220 | Msa0711260 | 0.800173 | 1.631976e-48 | -8.615850e-47 |
Msa0689840 | Msa0711260 | 0.811466 | 6.902747e-51 | -8.615850e-47 |
Msa0692090 | Msa0711260 | 0.808393 | 3.166430e-50 | -8.615850e-47 |
Msa0702020 | Msa0711260 | -0.801015 | 1.099204e-48 | -8.615850e-47 |
Msa0705520 | Msa0711260 | 0.800493 | 1.404205e-48 | -8.615850e-47 |
Msa0708680 | Msa0711260 | 0.830617 | 2.655738e-55 | -8.615850e-47 |
Msa0711260 | Msa0715350 | 0.819916 | 9.031815e-53 | -8.615850e-47 |
Msa0711260 | Msa0727480 | 0.816361 | 5.754805e-52 | -8.615850e-47 |
Msa0711260 | Msa0728210 | 0.812374 | 4.377587e-51 | -8.615850e-47 |
Msa0711260 | Msa0732970 | 0.803188 | 3.927980e-49 | -8.615850e-47 |
Msa0711260 | Msa0735140 | 0.825866 | 3.710681e-54 | -8.615850e-47 |
Msa0711260 | Msa0738680 | 0.803174 | 3.953860e-49 | -8.615850e-47 |
Msa0711260 | Msa0739720 | 0.808571 | 2.900662e-50 | -8.615850e-47 |
Msa0711260 | Msa0742200 | 0.802664 | 5.038806e-49 | -8.615850e-47 |
Msa0711260 | Msa0751960 | 0.881736 | 1.873593e-70 | -8.615850e-47 |
Msa0711260 | Msa0754750 | 0.802538 | 5.349321e-49 | -8.615850e-47 |
Msa0711260 | Msa0761830 | 0.808660 | 2.777072e-50 | -8.615850e-47 |
Msa0711260 | Msa0768670 | 0.842634 | 2.293815e-58 | -8.615850e-47 |
Msa0711260 | Msa0768720 | 0.826790 | 2.236373e-54 | -8.615850e-47 |
Msa0711260 | Msa0769910 | -0.806947 | 6.423619e-50 | -8.615850e-47 |
Msa0711260 | Msa0773960 | 0.808661 | 2.775642e-50 | -8.615850e-47 |
Msa0711260 | Msa0777060 | 0.804278 | 2.332630e-49 | -8.615850e-47 |
Msa0711260 | Msa0777070 | 0.835034 | 2.121708e-56 | -8.615850e-47 |
Msa0711260 | Msa0786940 | 0.807612 | 4.643122e-50 | -8.615850e-47 |
Msa0711260 | Msa0787860 | 0.828845 | 7.168396e-55 | -8.615850e-47 |
Msa0711260 | Msa0789220 | 0.814294 | 1.657365e-51 | -8.615850e-47 |
Msa0711260 | Msa0789410 | 0.812224 | 4.720297e-51 | -8.615850e-47 |
Msa0711260 | Msa0789780 | 0.802108 | 6.560599e-49 | -8.615850e-47 |
Msa0711260 | Msa0792410 | 0.807293 | 5.426310e-50 | -8.615850e-47 |
Msa0711260 | Msa0795210 | 0.810560 | 1.084914e-50 | -8.615850e-47 |
Msa0711260 | Msa0798240 | 0.801232 | 9.922371e-49 | -8.615850e-47 |
Msa0711260 | Msa0804170 | 0.818064 | 2.381794e-52 | -8.615850e-47 |
Msa0711260 | Msa0806930 | 0.962646 | 3.986579e-121 | -8.615850e-47 |
Msa0711260 | Msa0814160 | 0.870536 | 1.354739e-66 | -8.615850e-47 |
Msa0711260 | Msa0816140 | 0.830028 | 3.697741e-55 | -8.615850e-47 |
Msa0711260 | Msa0819150 | 0.808157 | 3.555090e-50 | -8.615850e-47 |
Msa0711260 | Msa0823380 | 0.810464 | 1.137819e-50 | -8.615850e-47 |
Msa0711260 | Msa0824850 | 0.831618 | 1.506963e-55 | -8.615850e-47 |
Msa0711260 | Msa0824860 | 0.808416 | 3.130642e-50 | -8.615850e-47 |
Msa0711260 | Msa0831890 | 0.974340 | 5.532067e-138 | -8.615850e-47 |
Msa0711260 | Msa0832750 | 0.803390 | 3.566048e-49 | -8.615850e-47 |
Msa0711260 | Msa0842180 | 0.808577 | 2.892551e-50 | -8.615850e-47 |
Msa0711260 | Msa0854840 | 0.848737 | 5.065290e-60 | -8.615850e-47 |
Msa0711260 | Msa0861730 | 0.840344 | 9.199107e-58 | -8.615850e-47 |
Msa0711260 | Msa0863840 | 0.827309 | 1.679500e-54 | -8.615850e-47 |
Msa0711260 | Msa0863850 | 0.822331 | 2.507821e-53 | -8.615850e-47 |
Msa0711260 | Msa0863860 | 0.831774 | 1.379127e-55 | -8.615850e-47 |
Msa0711260 | Msa0864160 | 0.848653 | 5.344700e-60 | -8.615850e-47 |
Msa0711260 | Msa0867080 | 0.822626 | 2.142272e-53 | -8.615850e-47 |
Msa0711260 | Msa0869660 | 0.823457 | 1.371307e-53 | -8.615850e-47 |
Msa0711260 | Msa0876600 | 0.827859 | 1.239356e-54 | -8.615850e-47 |
Msa0711260 | Msa0883640 | 0.812335 | 4.464289e-51 | -8.615850e-47 |
Msa0711260 | Msa0893840 | 0.821902 | 3.154109e-53 | -8.615850e-47 |
Msa0711260 | Msa0895420 | 0.820496 | 6.651372e-53 | -8.615850e-47 |
Msa0711260 | Msa0896920 | 0.811239 | 7.732555e-51 | -8.615850e-47 |
Msa0711260 | Msa0896950 | 0.804300 | 2.308026e-49 | -8.615850e-47 |
Msa0711260 | Msa0898830 | -0.823231 | 1.548134e-53 | -8.615850e-47 |
Msa0711260 | Msa0907840 | 0.800497 | 1.401650e-48 | -8.615850e-47 |
Msa0711260 | Msa0910830 | 0.819562 | 1.088132e-52 | -8.615850e-47 |
Msa0711260 | Msa0913550 | 0.817405 | 3.354351e-52 | -8.615850e-47 |
Msa0711260 | Msa0925630 | -0.809851 | 1.542266e-50 | -8.615850e-47 |
Msa0711260 | Msa0932140 | 0.837271 | 5.735973e-57 | -8.615850e-47 |
Msa0711260 | Msa0932150 | 0.854836 | 9.439522e-62 | -8.615850e-47 |
Msa0711260 | Msa0933610 | 0.800972 | 1.121686e-48 | -8.615850e-47 |
Msa0711260 | Msa0940780 | 0.814818 | 1.269388e-51 | -8.615850e-47 |
Msa0711260 | Msa0946010 | 0.803324 | 3.680802e-49 | -8.615850e-47 |
Msa0711260 | Msa0951150 | 0.803114 | 4.067488e-49 | -8.615850e-47 |
Msa0711260 | Msa0960090 | 0.814157 | 1.777202e-51 | -8.615850e-47 |
Msa0711260 | Msa0964510 | 0.816735 | 4.745211e-52 | -8.615850e-47 |
Msa0711260 | Msa0967900 | -0.836291 | 1.020104e-56 | -8.615850e-47 |
Msa0711260 | Msa0970270 | 0.813076 | 3.073267e-51 | -8.615850e-47 |
Msa0711260 | Msa0982560 | 0.805751 | 1.147584e-49 | -8.615850e-47 |
Msa0711260 | Msa0985700 | 0.812791 | 3.549763e-51 | -8.615850e-47 |
Msa0711260 | Msa0987640 | 0.814741 | 1.319935e-51 | -8.615850e-47 |
Msa0711260 | Msa0993450 | 0.817148 | 3.832419e-52 | -8.615850e-47 |
Msa0711260 | Msa0993710 | 0.807982 | 3.874352e-50 | -8.615850e-47 |
Msa0711260 | Msa0996980 | 0.812826 | 3.487195e-51 | -8.615850e-47 |
Msa0711260 | Msa0998660 | -0.802891 | 4.523718e-49 | -8.615850e-47 |
Msa0711260 | Msa1002820 | 0.807612 | 4.642262e-50 | -8.615850e-47 |
Msa0711260 | Msa1006030 | 0.811821 | 5.779630e-51 | -8.615850e-47 |
Msa0711260 | Msa1006170 | 0.823325 | 1.472179e-53 | -8.615850e-47 |
Msa0711260 | Msa1006220 | 0.800472 | 1.418643e-48 | -8.615850e-47 |
Msa0711260 | Msa1015560 | 0.815424 | 9.310700e-52 | -8.615850e-47 |
Msa0711260 | Msa1018590 | 0.807266 | 5.496061e-50 | -8.615850e-47 |
Msa0711260 | Msa1021620 | 0.823329 | 1.468904e-53 | -8.615850e-47 |
Msa0711260 | Msa1022490 | 0.812485 | 4.141462e-51 | -8.615850e-47 |
Msa0711260 | Msa1022510 | 0.823960 | 1.045045e-53 | -8.615850e-47 |
Msa0711260 | Msa1024350 | 0.850245 | 1.923390e-60 | -8.615850e-47 |
Msa0711260 | Msa1024420 | 0.808396 | 3.161107e-50 | -8.615850e-47 |
Msa0711260 | Msa1026050 | 0.804768 | 1.843028e-49 | -8.615850e-47 |
Msa0711260 | Msa1029860 | 0.803410 | 3.532093e-49 | -8.615850e-47 |
Msa0711260 | Msa1030320 | 0.834711 | 2.558647e-56 | -8.615850e-47 |
Msa0711260 | Msa1037530 | 0.811803 | 5.832917e-51 | -8.615850e-47 |
Msa0711260 | Msa1041650 | 0.817644 | 2.963908e-52 | -8.615850e-47 |
Msa0711260 | Msa1041910 | 0.801010 | 1.101777e-48 | -8.615850e-47 |
Msa0711260 | Msa1048350 | 0.813302 | 2.741560e-51 | -8.615850e-47 |
Msa0711260 | Msa1055450 | 0.804224 | 2.394046e-49 | -8.615850e-47 |
Msa0711260 | Msa1061670 | 0.837077 | 6.430525e-57 | -8.615850e-47 |
Msa0711260 | Msa1064940 | 0.830940 | 2.212970e-55 | -8.615850e-47 |
Msa0711260 | Msa1066150 | 0.823461 | 1.368412e-53 | -8.615850e-47 |
Msa0711260 | Msa1068080 | 0.832492 | 9.167221e-56 | -8.615850e-47 |
Msa0711260 | Msa1070630 | -0.815385 | 9.499799e-52 | -8.615850e-47 |
Msa0711260 | Msa1075090 | 0.800459 | 1.427032e-48 | -8.615850e-47 |
Msa0711260 | Msa1076830 | 0.804609 | 1.989894e-49 | -8.615850e-47 |
Msa0711260 | Msa1078090 | 0.801897 | 7.250242e-49 | -8.615850e-47 |
Msa0711260 | Msa1078590 | -0.808244 | 3.407131e-50 | -8.615850e-47 |
Msa0711260 | Msa1078760 | -0.805459 | 1.321452e-49 | -8.615850e-47 |
Msa0711260 | Msa1079820 | 0.821437 | 4.039290e-53 | -8.615850e-47 |
Msa0711260 | Msa1087370 | 0.823098 | 1.663039e-53 | -8.615850e-47 |
Msa0711260 | Msa1087380 | 0.820203 | 7.765868e-53 | -8.615850e-47 |
Msa0711260 | Msa1090150 | 0.812850 | 3.444463e-51 | -8.615850e-47 |
Msa0711260 | Msa1093190 | -0.819680 | 1.022955e-52 | -8.615850e-47 |
Msa0711260 | Msa1098100 | 0.814229 | 1.713273e-51 | -8.615850e-47 |
Msa0711260 | Msa1100030 | 0.808479 | 3.034962e-50 | -8.615850e-47 |
Msa0711260 | Msa1100330 | 0.802145 | 6.446019e-49 | -8.615850e-47 |
Msa0711260 | Msa1104960 | 0.803794 | 2.940168e-49 | -8.615850e-47 |
Msa0711260 | Msa1106680 | 0.837691 | 4.476297e-57 | -8.615850e-47 |
Msa0711260 | Msa1106960 | 0.829787 | 4.232841e-55 | -8.615850e-47 |
Msa0711260 | Msa1108560 | 0.812407 | 4.305361e-51 | -8.615850e-47 |
Msa0711260 | Msa1109880 | 0.830772 | 2.432216e-55 | -8.615850e-47 |
Msa0711260 | Msa1116850 | -0.800391 | 1.473248e-48 | -8.615850e-47 |
Msa0711260 | Msa1127840 | 0.803520 | 3.352432e-49 | -8.615850e-47 |
Msa0711260 | Msa1138110 | 0.825335 | 4.957639e-54 | -8.615850e-47 |
Msa0711260 | Msa1143490 | 0.810286 | 1.243380e-50 | -8.615850e-47 |
Msa0711260 | Msa1146980 | 0.800548 | 1.368757e-48 | -8.615850e-47 |
Msa0711260 | Msa1147010 | 0.807218 | 5.627436e-50 | -8.615850e-47 |
Msa0711260 | Msa1147030 | 0.835196 | 1.931340e-56 | -8.615850e-47 |
Msa0711260 | Msa1148210 | 0.827803 | 1.278742e-54 | -8.615850e-47 |
Msa0711260 | Msa1152180 | 0.803028 | 4.237550e-49 | -8.615850e-47 |
Msa0711260 | Msa1156240 | 0.831051 | 2.077658e-55 | -8.615850e-47 |
Msa0711260 | Msa1157210 | 0.819808 | 9.560844e-53 | -8.615850e-47 |
Msa0711260 | Msa1158450 | -0.815527 | 8.831543e-52 | -8.615850e-47 |
Msa0711260 | Msa1166550 | 0.813722 | 2.216075e-51 | -8.615850e-47 |
Msa0711260 | Msa1167960 | 0.803434 | 3.492058e-49 | -8.615850e-47 |
Msa0711260 | Msa1170340 | 0.861149 | 1.256958e-63 | -8.615850e-47 |
Msa0711260 | Msa1177090 | 0.833463 | 5.258403e-56 | -8.615850e-47 |
Msa0711260 | Msa1179340 | 0.820429 | 6.891905e-53 | -8.615850e-47 |
Msa0711260 | Msa1181090 | 0.844063 | 9.535637e-59 | -8.615850e-47 |
Msa0711260 | Msa1186340 | 0.839594 | 1.443743e-57 | -8.615850e-47 |
Msa0711260 | Msa1188080 | 0.814559 | 1.448799e-51 | -8.615850e-47 |
Msa0711260 | Msa1191350 | 0.825543 | 4.425416e-54 | -8.615850e-47 |
Msa0711260 | Msa1205270 | -0.814917 | 1.206655e-51 | -8.615850e-47 |
Msa0711260 | Msa1211130 | 0.803877 | 2.826276e-49 | -8.615850e-47 |
Msa0711260 | Msa1217890 | 0.802157 | 6.410230e-49 | -8.615850e-47 |
Msa0711260 | Msa1225140 | -0.800750 | 1.245099e-48 | -8.615850e-47 |
Msa0711260 | Msa1225850 | 0.829309 | 5.533847e-55 | -8.615850e-47 |
Msa0711260 | Msa1225890 | 0.833834 | 4.247949e-56 | -8.615850e-47 |
Msa0711260 | Msa1226210 | 0.806509 | 7.945752e-50 | -8.615850e-47 |
Msa0711260 | Msa1228600 | -0.809165 | 2.165115e-50 | -8.615850e-47 |
Msa0711260 | Msa1230560 | 0.808703 | 2.718203e-50 | -8.615850e-47 |
Msa0711260 | Msa1236860 | -0.811297 | 7.511330e-51 | -8.615850e-47 |
Msa0711260 | Msa1238250 | 0.820678 | 6.041671e-53 | -8.615850e-47 |
Msa0711260 | Msa1263110 | 0.811694 | 6.158890e-51 | -8.615850e-47 |
Msa0711260 | Msa1263120 | 0.809074 | 2.265182e-50 | -8.615850e-47 |
Msa0711260 | Msa1267990 | 0.837643 | 4.604230e-57 | -8.615850e-47 |
Msa0711260 | Msa1279750 | 0.801325 | 9.497444e-49 | -8.615850e-47 |
Msa0711260 | Msa1286420 | 0.804307 | 2.300791e-49 | -8.615850e-47 |
Msa0711260 | Msa1286860 | -0.809856 | 1.538811e-50 | -8.615850e-47 |
Msa0711260 | Msa1297220 | -0.821345 | 4.242613e-53 | -8.615850e-47 |
Msa0711260 | Msa1300610 | 0.809528 | 1.809520e-50 | -8.615850e-47 |
Msa0711260 | Msa1311370 | 0.801481 | 8.822732e-49 | -8.615850e-47 |
Msa0711260 | Msa1313720 | 0.806667 | 7.361368e-50 | -8.615850e-47 |
Msa0711260 | Msa1313840 | 0.815143 | 1.075184e-51 | -8.615850e-47 |
Msa0711260 | Msa1319030 | 0.814009 | 1.916145e-51 | -8.615850e-47 |
Msa0711260 | Msa1319190 | 0.831829 | 1.337119e-55 | -8.615850e-47 |
Msa0711260 | Msa1321970 | 0.839756 | 1.309482e-57 | -8.615850e-47 |
Msa0711260 | Msa1322500 | 0.808422 | 3.122074e-50 | -8.615850e-47 |
Msa0711260 | Msa1323120 | 0.826137 | 3.198694e-54 | -8.615850e-47 |
Msa0711260 | Msa1323260 | -0.823256 | 1.527426e-53 | -8.615850e-47 |
Msa0711260 | Msa1335100 | 0.816077 | 6.660558e-52 | -8.615850e-47 |
Msa0711260 | Msa1342360 | -0.808241 | 3.411951e-50 | -8.615850e-47 |
Msa0711260 | Msa1342760 | 0.801372 | 9.287306e-49 | -8.615850e-47 |
Msa0711260 | Msa1343450 | -0.826949 | 2.048365e-54 | -8.615850e-47 |
Msa0711260 | Msa1348860 | -0.811200 | 7.883672e-51 | -8.615850e-47 |
Msa0711260 | Msa1355340 | 0.819997 | 8.656365e-53 | -8.615850e-47 |
Msa0711260 | Msa1357860 | 0.834938 | 2.243521e-56 | -8.615850e-47 |
Msa0711260 | Msa1361980 | 0.813835 | 2.093347e-51 | -8.615850e-47 |
Msa0711260 | Msa1368420 | 0.800738 | 1.251724e-48 | -8.615850e-47 |
Msa0711260 | Msa1373560 | 0.806864 | 6.688458e-50 | -8.615850e-47 |
Msa0711260 | Msa1376010 | -0.800092 | 1.694578e-48 | -8.615850e-47 |
Msa0711260 | Msa1376070 | 0.809190 | 2.138537e-50 | -8.615850e-47 |
Msa0711260 | Msa1377520 | 0.803970 | 2.703270e-49 | -8.615850e-47 |
Msa0711260 | Msa1377980 | -0.802071 | 6.675534e-49 | -8.615850e-47 |
Msa0711260 | Msa1380740 | 0.830917 | 2.241131e-55 | -8.615850e-47 |
Msa0711260 | Msa1384410 | -0.804176 | 2.449009e-49 | -8.615850e-47 |
Msa0711260 | Msa1395050 | 0.802721 | 4.904017e-49 | -8.615850e-47 |
Msa0711260 | Msa1400290 | -0.809916 | 1.493199e-50 | -8.615850e-47 |
Msa0711260 | Msa1406840 | 0.815380 | 9.523522e-52 | -8.615850e-47 |
Msa0711260 | Msa1407670 | 0.801580 | 8.421406e-49 | -8.615850e-47 |
Msa0711260 | Msa1408280 | -0.801119 | 1.046293e-48 | -8.615850e-47 |
Msa0711260 | Msa1411550 | 0.835804 | 1.355373e-56 | -8.615850e-47 |
Msa0711260 | Msa1413020 | 0.819180 | 1.329959e-52 | -8.615850e-47 |
Msa0711260 | Msa1418840 | -0.800043 | 1.734118e-48 | -8.615850e-47 |
Msa0711260 | Msa1419390 | 0.809318 | 2.007735e-50 | -8.615850e-47 |
Msa0711260 | Msa1421130 | 0.809188 | 2.140667e-50 | -8.615850e-47 |
Msa0711260 | Msa1436660 | -0.800230 | 1.588586e-48 | -8.615850e-47 |
Msa0711260 | Msa1441450 | 0.811538 | 6.657995e-51 | -8.615850e-47 |
Msa0711260 | Msa1446090 | 0.800857 | 1.183744e-48 | -8.615850e-47 |
Msa0711260 | Msa1449770 | 0.806897 | 6.581557e-50 | -8.615850e-47 |
Msa0711260 | Msa1459610 | 0.848372 | 6.391753e-60 | -8.615850e-47 |
Msa0711260 | Msa1459660 | 0.806560 | 7.750943e-50 | -8.615850e-47 |
Msa0711260 | Msa1461660 | 0.800748 | 1.246067e-48 | -8.615850e-47 |
Msa0711260 | Msa1462610 | 0.804644 | 1.957130e-49 | -8.615850e-47 |
Msa0121320 | Msa0711260 | 0.803290 | 3.740862e-49 | -8.615850e-47 |
Msa0125600 | Msa0711260 | 0.808605 | 2.852519e-50 | -8.615850e-47 |
Msa0128110 | Msa0711260 | -0.801993 | 6.928033e-49 | -8.615850e-47 |
Msa0132080 | Msa0711260 | -0.807142 | 5.841076e-50 | -8.615850e-47 |
Msa0134570 | Msa0711260 | 0.805804 | 1.118606e-49 | -8.615850e-47 |
Msa0140270 | Msa0711260 | 0.815210 | 1.038894e-51 | -8.615850e-47 |
Msa0142560 | Msa0711260 | 0.819196 | 1.318410e-52 | -8.615850e-47 |
Msa0150910 | Msa0711260 | 0.846852 | 1.673957e-59 | -8.615850e-47 |
Msa0150920 | Msa0711260 | 0.824960 | 6.079910e-54 | -8.615850e-47 |
Msa0154460 | Msa0711260 | 0.809930 | 1.483355e-50 | -8.615850e-47 |
Msa0163340 | Msa0711260 | 0.811222 | 7.799875e-51 | -8.615850e-47 |
Msa0166030 | Msa0711260 | 0.835438 | 1.678402e-56 | -8.615850e-47 |
Msa0166180 | Msa0711260 | 0.814668 | 1.370290e-51 | -8.615850e-47 |
Msa0168010 | Msa0711260 | 0.814357 | 1.605726e-51 | -8.615850e-47 |
Msa0177550 | Msa0711260 | 0.825546 | 4.418783e-54 | -8.615850e-47 |
Msa0180210 | Msa0711260 | 0.800770 | 1.233189e-48 | -8.615850e-47 |
Msa0189150 | Msa0711260 | -0.800830 | 1.198885e-48 | -8.615850e-47 |
Msa0190670 | Msa0711260 | 0.864934 | 8.504117e-65 | -8.615850e-47 |
Msa0190890 | Msa0711260 | 0.843289 | 1.535608e-58 | -8.615850e-47 |
Msa0194230 | Msa0711260 | 0.825877 | 3.687740e-54 | -8.615850e-47 |
Msa0195580 | Msa0711260 | 0.801664 | 8.094699e-49 | -8.615850e-47 |
Msa0196260 | Msa0711260 | 0.821864 | 3.218957e-53 | -8.615850e-47 |
Msa0207640 | Msa0711260 | 0.820919 | 5.318309e-53 | -8.615850e-47 |
Msa0212550 | Msa0711260 | 0.820050 | 8.415971e-53 | -8.615850e-47 |
Msa0220090 | Msa0711260 | 0.849714 | 2.708513e-60 | -8.615850e-47 |
Msa0225070 | Msa0711260 | -0.840833 | 6.853832e-58 | -8.615850e-47 |
Msa0233210 | Msa0711260 | 0.836311 | 1.007892e-56 | -8.615850e-47 |
Msa0236690 | Msa0711260 | -0.803702 | 3.073422e-49 | -8.615850e-47 |
Msa0238110 | Msa0711260 | 0.825285 | 5.095852e-54 | -8.615850e-47 |
Msa0366510 | Msa0711260 | 0.834115 | 3.612391e-56 | -8.615850e-47 |
Msa0370620 | Msa0711260 | 0.812866 | 3.417726e-51 | -8.615850e-47 |
Msa0374040 | Msa0711260 | 0.833271 | 5.868865e-56 | -8.615850e-47 |
Msa0374470 | Msa0711260 | 0.804860 | 1.763760e-49 | -8.615850e-47 |
Msa0374600 | Msa0711260 | 0.802001 | 6.900720e-49 | -8.615850e-47 |
Msa0375860 | Msa0711260 | 0.816524 | 5.290273e-52 | -8.615850e-47 |
Msa0379480 | Msa0711260 | 0.847610 | 1.036996e-59 | -8.615850e-47 |
Msa0380680 | Msa0711260 | 0.827427 | 1.574378e-54 | -8.615850e-47 |
Msa0386910 | Msa0711260 | 0.806990 | 6.290093e-50 | -8.615850e-47 |
Msa0390160 | Msa0711260 | 0.800891 | 1.165203e-48 | -8.615850e-47 |
Msa0396860 | Msa0711260 | 0.815401 | 9.423665e-52 | -8.615850e-47 |
Msa0403740 | Msa0711260 | -0.804614 | 1.984700e-49 | -8.615850e-47 |
Msa0404140 | Msa0711260 | 0.819492 | 1.128652e-52 | -8.615850e-47 |
Msa0409500 | Msa0711260 | 0.800499 | 1.400851e-48 | -8.615850e-47 |
Msa0409530 | Msa0711260 | 0.804737 | 1.870942e-49 | -8.615850e-47 |
Msa0412580 | Msa0711260 | -0.802337 | 5.885652e-49 | -8.615850e-47 |
Msa0414480 | Msa0711260 | 0.818786 | 1.634526e-52 | -8.615850e-47 |
Msa0423220 | Msa0711260 | 0.808750 | 2.656225e-50 | -8.615850e-47 |
Msa0425950 | Msa0711260 | 0.801658 | 8.115328e-49 | -8.615850e-47 |
Msa0426030 | Msa0711260 | 0.807257 | 5.520462e-50 | -8.615850e-47 |
Msa0427260 | Msa0711260 | -0.801133 | 1.039724e-48 | -8.615850e-47 |
Msa0430320 | Msa0711260 | 0.809340 | 1.986423e-50 | -8.615850e-47 |
Msa0430460 | Msa0711260 | 0.813361 | 2.660831e-51 | -8.615850e-47 |
Msa0444210 | Msa0711260 | 0.800260 | 1.566968e-48 | -8.615850e-47 |
Msa0444250 | Msa0711260 | 0.802175 | 6.354576e-49 | -8.615850e-47 |
Msa0452770 | Msa0711260 | 0.825585 | 4.326742e-54 | -8.615850e-47 |
Msa0456450 | Msa0711260 | -0.808530 | 2.959785e-50 | -8.615850e-47 |
Msa0457070 | Msa0711260 | -0.819392 | 1.189652e-52 | -8.615850e-47 |
Msa0464310 | Msa0711260 | 0.815513 | 8.896978e-52 | -8.615850e-47 |
Msa0469450 | Msa0711260 | 0.804614 | 1.984982e-49 | -8.615850e-47 |
Msa0471390 | Msa0711260 | 0.814278 | 1.671188e-51 | -8.615850e-47 |
Msa0472390 | Msa0711260 | 0.802243 | 6.152773e-49 | -8.615850e-47 |
Msa0475330 | Msa0711260 | 0.822116 | 2.813644e-53 | -8.615850e-47 |
Msa0240990 | Msa0711260 | 0.811720 | 6.080841e-51 | -8.615850e-47 |
Msa0252930 | Msa0711260 | 0.817781 | 2.760223e-52 | -8.615850e-47 |
Msa0261400 | Msa0711260 | 0.843801 | 1.120516e-58 | -8.615850e-47 |
Msa0266140 | Msa0711260 | -0.827737 | 1.326264e-54 | -8.615850e-47 |
Msa0269240 | Msa0711260 | 0.801073 | 1.069143e-48 | -8.615850e-47 |
Msa0272210 | Msa0711260 | 0.833925 | 4.029021e-56 | -8.615850e-47 |
Msa0274250 | Msa0711260 | 0.828746 | 7.575977e-55 | -8.615850e-47 |
Msa0274260 | Msa0711260 | 0.811209 | 7.851608e-51 | -8.615850e-47 |
Msa0278460 | Msa0711260 | 0.846428 | 2.185844e-59 | -8.615850e-47 |
Msa0278950 | Msa0711260 | 0.808059 | 3.730998e-50 | -8.615850e-47 |
Msa0279810 | Msa0711260 | 0.810096 | 1.366303e-50 | -8.615850e-47 |
Msa0281190 | Msa0711260 | 0.805327 | 1.408198e-49 | -8.615850e-47 |
Msa0290800 | Msa0711260 | 0.818587 | 1.813150e-52 | -8.615850e-47 |
Msa0299030 | Msa0711260 | 0.856217 | 3.735679e-62 | -8.615850e-47 |
Msa0304060 | Msa0711260 | -0.826012 | 3.426129e-54 | -8.615850e-47 |
Msa0307630 | Msa0711260 | 0.808717 | 2.699890e-50 | -8.615850e-47 |
Msa0311540 | Msa0711260 | 0.816023 | 6.848633e-52 | -8.615850e-47 |
Msa0314440 | Msa0711260 | 0.813044 | 3.123430e-51 | -8.615850e-47 |
Msa0319220 | Msa0711260 | 0.814475 | 1.512001e-51 | -8.615850e-47 |
Msa0328090 | Msa0711260 | 0.844243 | 8.528091e-59 | -8.615850e-47 |
Msa0328100 | Msa0711260 | 0.804274 | 2.337273e-49 | -8.615850e-47 |
Msa0328870 | Msa0711260 | 0.819300 | 1.248914e-52 | -8.615850e-47 |
Msa0335340 | Msa0711260 | 0.800277 | 1.554216e-48 | -8.615850e-47 |
Msa0348370 | Msa0711260 | 0.808320 | 3.281443e-50 | -8.615850e-47 |
Msa0349910 | Msa0711260 | 0.839882 | 1.214873e-57 | -8.615850e-47 |
Msa0349930 | Msa0711260 | 0.805049 | 1.610427e-49 | -8.615850e-47 |
Msa0358470 | Msa0711260 | 0.803957 | 2.720452e-49 | -8.615850e-47 |
Msa0364030 | Msa0711260 | -0.803932 | 2.752482e-49 | -8.615850e-47 |
Msa0482830 | Msa0711260 | 0.802132 | 6.486529e-49 | -8.615850e-47 |
Msa0484410 | Msa0711260 | 0.806685 | 7.294772e-50 | -8.615850e-47 |
Msa0490060 | Msa0711260 | 0.809421 | 1.907754e-50 | -8.615850e-47 |
Msa0491770 | Msa0711260 | 0.837980 | 3.773288e-57 | -8.615850e-47 |
Msa0491780 | Msa0711260 | 0.815228 | 1.029533e-51 | -8.615850e-47 |
Msa0491830 | Msa0711260 | 0.809719 | 1.646950e-50 | -8.615850e-47 |
Msa0502970 | Msa0711260 | 0.800837 | 1.194769e-48 | -8.615850e-47 |
Msa0515130 | Msa0711260 | 0.811064 | 8.440120e-51 | -8.615850e-47 |
Msa0515150 | Msa0711260 | 0.808868 | 2.506625e-50 | -8.615850e-47 |
Msa0523720 | Msa0711260 | 0.834676 | 2.611710e-56 | -8.615850e-47 |
Msa0526880 | Msa0711260 | 0.801876 | 7.322141e-49 | -8.615850e-47 |
Msa0529360 | Msa0711260 | 0.807665 | 4.523871e-50 | -8.615850e-47 |
Msa0535570 | Msa0711260 | 0.844537 | 7.109812e-59 | -8.615850e-47 |
Msa0538050 | Msa0711260 | -0.811627 | 6.369559e-51 | -8.615850e-47 |
Msa0538440 | Msa0711260 | 0.816078 | 6.656177e-52 | -8.615850e-47 |
Msa0538450 | Msa0711260 | 0.810834 | 9.463542e-51 | -8.615850e-47 |
Msa0538520 | Msa0711260 | 0.819310 | 1.242019e-52 | -8.615850e-47 |
Msa0538530 | Msa0711260 | 0.810894 | 9.184542e-51 | -8.615850e-47 |
Msa0543740 | Msa0711260 | 0.801544 | 8.563048e-49 | -8.615850e-47 |
Msa0549170 | Msa0711260 | 0.816683 | 4.874350e-52 | -8.615850e-47 |
Msa0549920 | Msa0711260 | 0.818600 | 1.801080e-52 | -8.615850e-47 |
Msa0555920 | Msa0711260 | 0.802771 | 4.790613e-49 | -8.615850e-47 |
Msa0565150 | Msa0711260 | -0.804258 | 2.354921e-49 | -8.615850e-47 |
Msa0565700 | Msa0711260 | 0.801659 | 8.112987e-49 | -8.615850e-47 |
Msa0566460 | Msa0711260 | 0.805814 | 1.113190e-49 | -8.615850e-47 |
Msa0569100 | Msa0711260 | 0.817776 | 2.766300e-52 | -8.615850e-47 |
Msa0572730 | Msa0711260 | -0.807842 | 4.149283e-50 | -8.615850e-47 |
Msa0580100 | Msa0711260 | 0.807184 | 5.720902e-50 | -8.615850e-47 |
Msa0580210 | Msa0711260 | 0.808582 | 2.884903e-50 | -8.615850e-47 |
Msa0583390 | Msa0711260 | 0.833290 | 5.804333e-56 | -8.615850e-47 |
Msa0584370 | Msa0711260 | 0.812321 | 4.496382e-51 | -8.615850e-47 |
Msa0587870 | Msa0711260 | 0.808287 | 3.335585e-50 | -8.615850e-47 |
Msa0591490 | Msa0711260 | 0.851403 | 9.077201e-61 | -8.615850e-47 |
Msa0594320 | Msa0711260 | 0.803545 | 3.312646e-49 | -8.615850e-47 |
Msa0594330 | Msa0711260 | 0.801298 | 9.619938e-49 | -8.615850e-47 |
Msa0594630 | Msa0711260 | 0.802798 | 4.727418e-49 | -8.615850e-47 |
Msa0602050 | Msa0711260 | 0.826001 | 3.446673e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0711260 | MtrunA17_Chr5g0394031 | 95.337 | 579 | 26 | 1 | 1 | 578 | 9 | 587 | 0.0 | 1123 |
Msa0711260 | MtrunA17_Chr8g0346061 | 67.077 | 568 | 184 | 3 | 9 | 573 | 12 | 579 | 0.0 | 808 |
Msa0711260 | MtrunA17_Chr1g0157561 | 45.892 | 353 | 187 | 2 | 222 | 574 | 19 | 367 | 3.88e-110 | 334 |
Msa0711260 | MtrunA17_Chr7g0276181 | 82.734 | 139 | 24 | 0 | 439 | 577 | 16 | 154 | 1.19e-73 | 232 |
Msa0711260 | MtrunA17_Chr7g0276161 | 77.941 | 136 | 27 | 1 | 6 | 138 | 11 | 146 | 7.42e-68 | 216 |
Msa0711260 | MtrunA17_Chr1g0157571 | 50.000 | 206 | 96 | 4 | 22 | 223 | 30 | 232 | 2.21e-57 | 192 |
Msa0711260 | MtrunA17_Chr8g0346031 | 50.000 | 154 | 44 | 4 | 154 | 306 | 12 | 133 | 7.25e-39 | 139 |
Msa0711260 | MtrunA17_Chr1g0157541 | 48.872 | 133 | 66 | 1 | 359 | 491 | 3 | 133 | 2.08e-38 | 138 |
Msa0711260 | MtrunA17_Chr8g0346041 | 77.083 | 48 | 11 | 0 | 444 | 491 | 3 | 50 | 1.07e-24 | 97.1 |
Msa0711260 | MtrunA17_Chr7g0276171 | 69.492 | 59 | 18 | 0 | 357 | 415 | 1 | 59 | 8.42e-21 | 86.3 |
Msa0711260 | MtrunA17_Chr1g0172001 | 47.297 | 74 | 39 | 0 | 401 | 474 | 15 | 88 | 4.77e-19 | 82.8 |
Msa0711260 | MtrunA17_Chr8g0346051 | 80.488 | 41 | 6 | 2 | 518 | 557 | 3 | 42 | 2.11e-14 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0711260 | AT2G46760.1 | 63.937 | 574 | 201 | 3 | 6 | 573 | 16 | 589 | 0.0 | 781 |
Msa0711260 | AT2G46740.1 | 62.610 | 567 | 209 | 2 | 10 | 573 | 19 | 585 | 0.0 | 771 |
Msa0711260 | AT2G46750.1 | 62.347 | 571 | 211 | 3 | 10 | 576 | 15 | 585 | 0.0 | 767 |
Msa0711260 | AT1G32300.1 | 60.490 | 572 | 221 | 4 | 6 | 573 | 3 | 573 | 0.0 | 722 |
Msa0711260 | AT5G56490.1 | 59.436 | 567 | 225 | 4 | 11 | 573 | 7 | 572 | 0.0 | 714 |
Msa0711260 | AT5G11540.1 | 46.794 | 577 | 295 | 7 | 4 | 575 | 8 | 577 | 1.37e-179 | 520 |
Msa0711260 | AT5G56470.1 | 65.517 | 232 | 79 | 1 | 345 | 575 | 18 | 249 | 1.09e-107 | 323 |
Find 128 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCTTCCTATTTATAATATA+TGG | 0.091909 | 5_1:-3117892 | Msa0711260:CDS |
CCCCACCAATATGGTGTATT+TGG | 0.188327 | 5_1:+3117493 | None:intergenic |
CATGAGCACCAGTGCTAATT+AGG | 0.257383 | 5_1:+3117455 | None:intergenic |
TATAGGGGACTCAAGAATTA+AGG | 0.267243 | 5_1:-3114244 | Msa0711260:CDS |
AGGGACATGTTTGGATAGTT+TGG | 0.269173 | 5_1:-3114289 | Msa0711260:CDS |
CAAATAGGGTTGTTCAAATA+TGG | 0.278248 | 5_1:-3113958 | Msa0711260:CDS |
AATGCAGCCAGAATTTCTTT+AGG | 0.279442 | 5_1:-3117304 | Msa0711260:CDS |
ACATTGGCAGGCATTGCTTA+TGG | 0.280315 | 5_1:-3115476 | Msa0711260:CDS |
ATTGAAGAGATAGAACAAAT+AGG | 0.284529 | 5_1:-3113973 | Msa0711260:CDS |
AGAATTTCTTTAGGGGTTCT+TGG | 0.296221 | 5_1:-3117295 | Msa0711260:CDS |
ATGCAGCCAGAATTTCTTTA+GGG | 0.319315 | 5_1:-3117303 | Msa0711260:CDS |
TTACCCCATATATTATAAAT+AGG | 0.323032 | 5_1:+3117887 | None:intergenic |
GGTGATGAATTGATTACTTT+TGG | 0.325703 | 5_1:-3116254 | Msa0711260:CDS |
TCTTCCTATTTATAATATAT+GGG | 0.333446 | 5_1:-3117891 | Msa0711260:CDS |
AAATGAGCACAGCTTGTATA+GGG | 0.346844 | 5_1:-3114260 | Msa0711260:CDS |
TACAACTTCTAGGGCATACT+TGG | 0.350165 | 5_1:-3114079 | Msa0711260:CDS |
TTCTGGCTGCATTAAGATCT+TGG | 0.351590 | 5_1:+3117314 | None:intergenic |
CGTGTCTCTGTAAATACATT+TGG | 0.353710 | 5_1:-3116161 | Msa0711260:CDS |
TGCGTTATGTTACAACTTCT+AGG | 0.355002 | 5_1:-3114089 | Msa0711260:CDS |
TTATTTGATGAACACTGAAT+TGG | 0.359791 | 5_1:+3117844 | None:intergenic |
TTTATAGGTTACCCTACAAT+TGG | 0.371803 | 5_1:-3116330 | Msa0711260:intron |
AATAGAAATGTAGGATTTGT+GGG | 0.373649 | 5_1:-3113913 | Msa0711260:CDS |
ATAAGGATGCAAGGGTTTGT+AGG | 0.373655 | 5_1:-3113669 | Msa0711260:CDS |
CAAATGAGCACAGCTTGTAT+AGG | 0.376160 | 5_1:-3114261 | Msa0711260:CDS |
TCTGTAAATACATTTGGAAA+TGG | 0.379112 | 5_1:-3116155 | Msa0711260:CDS |
ATATGGAGGGTTACCCCATT+GGG | 0.386637 | 5_1:-3113941 | Msa0711260:CDS |
TCTAAGCCACACAGTGCCTT+TGG | 0.390414 | 5_1:+3114132 | None:intergenic |
AAGAACCCCTAAAGAAATTC+TGG | 0.393239 | 5_1:+3117297 | None:intergenic |
CAGACCAGGCAGAATCTATA+AGG | 0.400088 | 5_1:-3113686 | Msa0711260:CDS |
CTAGCTTGTCCTGATGATAA+TGG | 0.400394 | 5_1:-3117646 | Msa0711260:CDS |
TTGAAGAGATAGAACAAATA+GGG | 0.401394 | 5_1:-3113972 | Msa0711260:CDS |
TGAAGAGGGGTTCCAATTGT+AGG | 0.412025 | 5_1:+3116318 | None:intergenic |
CGGTTGTTGAATCCAACAAC+GGG | 0.428344 | 5_1:+3114324 | None:intergenic |
ACAATCATCAGGGACATGTT+TGG | 0.432635 | 5_1:-3114298 | Msa0711260:CDS |
AACAACCGAATACAATCATC+AGG | 0.432752 | 5_1:-3114309 | Msa0711260:CDS |
GAACACTGAATTGGATCTGC+TGG | 0.438312 | 5_1:+3117853 | None:intergenic |
GCAAAGATCCATTGACTCCT+AGG | 0.438376 | 5_1:-3114011 | Msa0711260:CDS |
TTTATTGGATACCCCGTTGT+TGG | 0.439150 | 5_1:-3114336 | Msa0711260:CDS |
TGGTGGGGTTTAACCATTGG+TGG | 0.442781 | 5_1:-3117478 | Msa0711260:CDS |
CTCTGCCAAATACACCATAT+TGG | 0.446772 | 5_1:-3117498 | Msa0711260:CDS |
AAAGTTGACCACTGAAACAT+TGG | 0.447525 | 5_1:-3115492 | Msa0711260:CDS |
ATGGTTAAACCCCACCAATA+TGG | 0.449948 | 5_1:+3117484 | None:intergenic |
TGAGGCTGCAAGGTTTGAAA+TGG | 0.451881 | 5_1:-3117521 | Msa0711260:CDS |
TCATCAGGACAAGCTAGCTT+TGG | 0.454874 | 5_1:+3117652 | None:intergenic |
GGTTCTTGGAGTTATTTCTC+AGG | 0.455282 | 5_1:-3117281 | Msa0711260:intron |
ATGTCCCTGATGATTGTATT+CGG | 0.457805 | 5_1:+3114304 | None:intergenic |
GGAAGTACATTGTGGGGTAA+AGG | 0.462925 | 5_1:-3117433 | Msa0711260:CDS |
AATGGTTTATATGATTCCAT+TGG | 0.463396 | 5_1:-3116137 | Msa0711260:CDS |
ATTAGTAGTCCATTATCATC+AGG | 0.465886 | 5_1:+3117637 | None:intergenic |
AAATAGAAATGTAGGATTTG+TGG | 0.469318 | 5_1:-3113914 | Msa0711260:CDS |
AATATGGAGGGTTACCCCAT+TGG | 0.476962 | 5_1:-3113942 | Msa0711260:CDS |
TATCCATCTTCACATTCTGC+AGG | 0.483342 | 5_1:+3117367 | None:intergenic |
AGCTCTGCAAATGCTTCGAT+CGG | 0.485188 | 5_1:+3117783 | None:intergenic |
TCATAAAGCCTAGGAGTCAA+TGG | 0.486792 | 5_1:+3114003 | None:intergenic |
GCTCTGCAAATGCTTCGATC+GGG | 0.489344 | 5_1:+3117784 | None:intergenic |
TTAACACTTGCTAGAACTAC+AGG | 0.489651 | 5_1:-3116089 | Msa0711260:intron |
TATTGGTGGGGTTTAACCAT+TGG | 0.490022 | 5_1:-3117481 | Msa0711260:CDS |
TGCACCATCACGAATTCATA+TGG | 0.491511 | 5_1:-3117814 | Msa0711260:CDS |
ATGGTATCCAAATCAACAAA+AGG | 0.495917 | 5_1:-3116204 | Msa0711260:CDS |
TCACTAGAGAAAAGTCTCTT+CGG | 0.496911 | 5_1:+3113832 | None:intergenic |
ATTAAAAGATGGATGTGCAT+TGG | 0.503020 | 5_1:-3113767 | Msa0711260:CDS |
TGGACTTCGCTCAACACCTT+CGG | 0.503539 | 5_1:-3116117 | Msa0711260:CDS |
AATGCTGTATCGTAATTGAA+TGG | 0.505261 | 5_1:+3114219 | None:intergenic |
AAAGATGGATGTGCATTGGA+AGG | 0.509773 | 5_1:-3113763 | Msa0711260:CDS |
CTAATTAGCACTGGTGCTCA+TGG | 0.510117 | 5_1:-3117454 | Msa0711260:CDS |
GCCAAATACACCATATTGGT+GGG | 0.516331 | 5_1:-3117494 | Msa0711260:CDS |
GCGTTATGTTACAACTTCTA+GGG | 0.518082 | 5_1:-3114088 | Msa0711260:CDS |
GCATCCTTATAGATTCTGCC+TGG | 0.521471 | 5_1:+3113682 | None:intergenic |
TGTAAGAGATCGCTTGAAGA+GGG | 0.521505 | 5_1:+3116304 | None:intergenic |
ATGAGCTCCGCCTCTGTGGT+TGG | 0.522032 | 5_1:+3117745 | None:intergenic |
GGAGTGACAATATTAAAAGA+TGG | 0.527315 | 5_1:-3113778 | Msa0711260:CDS |
TGCTCATGGAAGTACATTGT+GGG | 0.529109 | 5_1:-3117440 | Msa0711260:CDS |
GAAGAGGGGTTCCAATTGTA+GGG | 0.530740 | 5_1:+3116319 | None:intergenic |
AAGAACTACTTCTGCAGACC+AGG | 0.530862 | 5_1:-3113700 | Msa0711260:CDS |
TGCCAAATACACCATATTGG+TGG | 0.542586 | 5_1:-3117495 | Msa0711260:CDS |
ATAGGGTTGTTCAAATATGG+AGG | 0.543202 | 5_1:-3113955 | Msa0711260:CDS |
ATTATATCTTCATAAAGCCT+AGG | 0.544553 | 5_1:+3113994 | None:intergenic |
CTTCCTATTTATAATATATG+GGG | 0.545294 | 5_1:-3117890 | Msa0711260:CDS |
GCTTGTTCAGTTGGAGCCAA+AGG | 0.549454 | 5_1:-3114148 | Msa0711260:CDS |
GATTGGACAGACCAAGTGCT+TGG | 0.552501 | 5_1:-3113811 | Msa0711260:CDS |
ATAGGGGACTCAAGAATTAA+GGG | 0.555298 | 5_1:-3114243 | Msa0711260:CDS |
ATGAATTTGCCGATGTAACA+TGG | 0.558719 | 5_1:-3116223 | Msa0711260:CDS |
AAGCATTTGCAGAGCTAGCA+AGG | 0.561569 | 5_1:-3117776 | Msa0711260:CDS |
GCAGAATCTATAAGGATGCA+AGG | 0.571200 | 5_1:-3113678 | Msa0711260:CDS |
AGGTGTTGAGCGAAGTCCAA+TGG | 0.576754 | 5_1:+3116121 | None:intergenic |
AGCCCTGCAGAATGTGAAGA+TGG | 0.584233 | 5_1:-3117370 | Msa0711260:CDS |
ATGTGAAGATGGATATGCTA+AGG | 0.584411 | 5_1:-3117359 | Msa0711260:CDS |
ATTGAGAGAGATCATTAATG+AGG | 0.592754 | 5_1:-3117539 | Msa0711260:CDS |
ATTGGTGGCCTAATTAGCAC+TGG | 0.597316 | 5_1:-3117463 | Msa0711260:CDS |
TGATATGAGCTCCGCCTCTG+TGG | 0.597346 | 5_1:+3117741 | None:intergenic |
TTGACCACTGAAACATTGGC+AGG | 0.598407 | 5_1:-3115488 | Msa0711260:CDS |
AAGATGGATGTGCATTGGAA+GGG | 0.602495 | 5_1:-3113762 | Msa0711260:CDS |
ATGTAAGAGATCGCTTGAAG+AGG | 0.606639 | 5_1:+3116303 | None:intergenic |
TAGGGTTGTTCAAATATGGA+GGG | 0.607320 | 5_1:-3113954 | Msa0711260:CDS |
CCAAATACACCATATTGGTG+GGG | 0.608182 | 5_1:-3117493 | Msa0711260:CDS |
AGATCATTAATGAGGCTGCA+AGG | 0.609352 | 5_1:-3117531 | Msa0711260:CDS |
TGCAGCCAGAATTTCTTTAG+GGG | 0.610090 | 5_1:-3117302 | Msa0711260:CDS |
GTGCTCATGGAAGTACATTG+TGG | 0.613279 | 5_1:-3117441 | Msa0711260:CDS |
CTCTGCAAATGCTTCGATCG+GGG | 0.613508 | 5_1:+3117785 | None:intergenic |
TATGGATTGTCTAATAACAA+TGG | 0.616435 | 5_1:-3115458 | Msa0711260:intron |
ATTTGGATACCATGTTACAT+CGG | 0.618948 | 5_1:+3116214 | None:intergenic |
TGTCAAATTGTTGAGAATGA+CGG | 0.619117 | 5_1:-3117578 | Msa0711260:CDS |
CACTGAATTGGATCTGCTGG+AGG | 0.620282 | 5_1:+3117856 | None:intergenic |
AATGCCTGCCAATGTTTCAG+TGG | 0.623086 | 5_1:+3115484 | None:intergenic |
ATAGAAATGTAGGATTTGTG+GGG | 0.623934 | 5_1:-3113912 | Msa0711260:CDS |
ATGTGTTACATACTCATGCA+CGG | 0.628045 | 5_1:+3117405 | None:intergenic |
CAGAATCTATAAGGATGCAA+GGG | 0.628326 | 5_1:-3113677 | Msa0711260:CDS |
GCAAGTGTTAATGTGGCCGA+AGG | 0.628687 | 5_1:+3116101 | None:intergenic |
AGTGCTAATTAGGCCACCAA+TGG | 0.631088 | 5_1:+3117465 | None:intergenic |
ATCCATCTTCACATTCTGCA+GGG | 0.631851 | 5_1:+3117368 | None:intergenic |
TCGGTTGTTGAATCCAACAA+CGG | 0.632919 | 5_1:+3114323 | None:intergenic |
ACAACTTCTAGGGCATACTT+GGG | 0.636507 | 5_1:-3114078 | Msa0711260:CDS |
TAGAAATGTAGGATTTGTGG+GGG | 0.638234 | 5_1:-3113911 | Msa0711260:CDS |
GAAGCAACACACGATACTAA+CGG | 0.640574 | 5_1:-3115530 | Msa0711260:CDS |
AATGAGCACAGCTTGTATAG+GGG | 0.645893 | 5_1:-3114259 | Msa0711260:CDS |
AGTTCTAGCAAGTGTTAATG+TGG | 0.647109 | 5_1:+3116094 | None:intergenic |
CACGCCATATGAATTCGTGA+TGG | 0.651634 | 5_1:+3117810 | None:intergenic |
TATGTATCCAACCACAGAGG+CGG | 0.656615 | 5_1:-3117752 | Msa0711260:CDS |
TATGGAGGGTTACCCCATTG+GGG | 0.660407 | 5_1:-3113940 | Msa0711260:CDS |
GTAAGAGATCGCTTGAAGAG+GGG | 0.684242 | 5_1:+3116305 | None:intergenic |
TTGAGAATGACGGTAGAGAG+CGG | 0.687732 | 5_1:-3117568 | Msa0711260:CDS |
GAGTCAATGGATCTTTGCTG+CGG | 0.690316 | 5_1:+3114016 | None:intergenic |
TTGGAGCCAAAGGCACTGTG+TGG | 0.693379 | 5_1:-3114138 | Msa0711260:CDS |
ACAACCGAATACAATCATCA+GGG | 0.704131 | 5_1:-3114308 | Msa0711260:CDS |
TGTGGCTTAGAATTGTACAA+TGG | 0.725191 | 5_1:-3114120 | Msa0711260:CDS |
GCTCATGGAAGTACATTGTG+GGG | 0.748013 | 5_1:-3117439 | Msa0711260:CDS |
GGTTATGTATCCAACCACAG+AGG | 0.789941 | 5_1:-3117755 | Msa0711260:CDS |
GGTTGTTGAATCCAACAACG+GGG | 0.798806 | 5_1:+3114325 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTAACTAATAATATTCTA+AGG | - | chr5_1:3116892-3116911 | Msa0711260:intron | 10.0% |
!!! | TGAATTTTTGTTAAAAAAAA+TGG | - | chr5_1:3117078-3117097 | Msa0711260:intron | 10.0% |
!!! | GAATTTTTGTTAAAAAAAAT+GGG | - | chr5_1:3117079-3117098 | Msa0711260:intron | 10.0% |
!!! | AATTTTTGTTAAAAAAAATG+GGG | - | chr5_1:3117080-3117099 | Msa0711260:intron | 10.0% |
!! | ATCTTCCTATTTATAATATA+TGG | - | chr5_1:3113684-3113703 | Msa0711260:CDS | 15.0% |
!! | TCTTCCTATTTATAATATAT+GGG | - | chr5_1:3113685-3113704 | Msa0711260:CDS | 15.0% |
!! | TTTGTGGAATATATAATATA+TGG | - | chr5_1:3114604-3114623 | Msa0711260:intron | 15.0% |
!! | ATAATATCAATAAAATTTCG+TGG | + | chr5_1:3114919-3114938 | None:intergenic | 15.0% |
!!! | ATAACAATTTTAACTTTCTA+TGG | + | chr5_1:3115972-3115991 | None:intergenic | 15.0% |
!!! | TTTTTTGAAATAAAGTCATA+TGG | + | chr5_1:3116440-3116459 | None:intergenic | 15.0% |
!! | TGAAAATGATCATATAAAAA+GGG | + | chr5_1:3116613-3116632 | None:intergenic | 15.0% |
!! | TTGAAAATGATCATATAAAA+AGG | + | chr5_1:3116614-3116633 | None:intergenic | 15.0% |
!! | TTAAACATATTTATACACAA+AGG | + | chr5_1:3116713-3116732 | None:intergenic | 15.0% |
!! | ACATTGATATTATTAATAAC+AGG | - | chr5_1:3116757-3116776 | Msa0711260:intron | 15.0% |
!! | GGCAATAAAAAAATATAATA+AGG | - | chr5_1:3117686-3117705 | Msa0711260:CDS | 15.0% |
!! | AAAAATATAATAAGGCAAAT+AGG | - | chr5_1:3117694-3117713 | Msa0711260:CDS | 15.0% |
!! | CTTCCTATTTATAATATATG+GGG | - | chr5_1:3113686-3113705 | Msa0711260:CDS | 20.0% |
!! | TTACCCCATATATTATAAAT+AGG | + | chr5_1:3113692-3113711 | None:intergenic | 20.0% |
!! | TACTAGAAATACAAAACAAA+AGG | + | chr5_1:3114327-3114346 | None:intergenic | 20.0% |
!! | TTATACTTCCAAAATAACTT+AGG | - | chr5_1:3114511-3114530 | Msa0711260:intron | 20.0% |
!! | TTATATATTCCACAAAAGTT+TGG | + | chr5_1:3114600-3114619 | None:intergenic | 20.0% |
!! | TACGTGTAATATACTATATA+AGG | - | chr5_1:3114938-3114957 | Msa0711260:intron | 20.0% |
!! | TATACTATATAAGGAAATAC+TGG | - | chr5_1:3114947-3114966 | Msa0711260:intron | 20.0% |
!! | ATACTATATAAGGAAATACT+GGG | - | chr5_1:3114948-3114967 | Msa0711260:intron | 20.0% |
!!! | AAGATAAGTGTTGAATTTAA+AGG | - | chr5_1:3115020-3115039 | Msa0711260:intron | 20.0% |
!!! | ATTACCACTTACTATTTTAT+AGG | - | chr5_1:3115231-3115250 | Msa0711260:intron | 20.0% |
!! | ACAAAAAATGATTCTGATTT+GGG | - | chr5_1:3115301-3115320 | Msa0711260:intron | 20.0% |
!!! | AATACAATGACTTTTAGAAT+GGG | + | chr5_1:3116156-3116175 | None:intergenic | 20.0% |
!!! | AAATACAATGACTTTTAGAA+TGG | + | chr5_1:3116157-3116176 | None:intergenic | 20.0% |
!! | ACTTATTAAGATGAATAAGT+GGG | + | chr5_1:3116208-3116227 | None:intergenic | 20.0% |
!! | TATACACAAAGGATAAAATT+TGG | + | chr5_1:3116702-3116721 | None:intergenic | 20.0% |
!! | TTATTAATAACAGGTGTATT+TGG | - | chr5_1:3116766-3116785 | Msa0711260:intron | 20.0% |
!! | TTTGGAAAACAAGTAATAAA+CGG | - | chr5_1:3116784-3116803 | Msa0711260:intron | 20.0% |
!!! | TGTAAATAGTCTTATAATTG+TGG | - | chr5_1:3116854-3116873 | Msa0711260:intron | 20.0% |
!!! | TTTTTTGTAGGAACATTTAT+TGG | - | chr5_1:3117225-3117244 | Msa0711260:intron | 20.0% |
!!! | AAGTATTTTACAGTAGTTAA+GGG | + | chr5_1:3117390-3117409 | None:intergenic | 20.0% |
! | AAATAGGAAGATAAAAAGAG+TGG | + | chr5_1:3113676-3113695 | None:intergenic | 25.0% |
! | TTATTTGATGAACACTGAAT+TGG | + | chr5_1:3113735-3113754 | None:intergenic | 25.0% |
!!! | AGATCTATACTTTTAAGATC+TGG | - | chr5_1:3114486-3114505 | Msa0711260:intron | 25.0% |
! | GGATCTTGAGTTAAAATATT+GGG | - | chr5_1:3114570-3114589 | Msa0711260:intron | 25.0% |
! | GATCTTGAGTTAAAATATTG+GGG | - | chr5_1:3114571-3114590 | Msa0711260:intron | 25.0% |
! | ATCTTGAGTTAAAATATTGG+GGG | - | chr5_1:3114572-3114591 | Msa0711260:intron | 25.0% |
! | CTGTAACAATTATTAACAAC+TGG | - | chr5_1:3114640-3114659 | Msa0711260:intron | 25.0% |
! | AATGTGTAAAAAGAAGAGTA+TGG | - | chr5_1:3114762-3114781 | Msa0711260:intron | 25.0% |
!! | ATGTGTAAAAAGAAGAGTAT+GGG | - | chr5_1:3114763-3114782 | Msa0711260:intron | 25.0% |
! | AATGTGTAAAAAGAAGAGTA+TGG | - | chr5_1:3114762-3114781 | Msa0711260:intron | 25.0% |
!! | ATGTGTAAAAAGAAGAGTAT+GGG | - | chr5_1:3114763-3114782 | Msa0711260:intron | 25.0% |
! | AATGTGTAAAAAGAAGAGTA+TGG | - | chr5_1:3114762-3114781 | Msa0711260:intron | 25.0% |
! | TACTATATAAGGAAATACTG+GGG | - | chr5_1:3114949-3114968 | Msa0711260:intron | 25.0% |
! | GTAACCTATAAAATAGTAAG+TGG | + | chr5_1:3115238-3115257 | None:intergenic | 25.0% |
! | GACAAAAAATGATTCTGATT+TGG | - | chr5_1:3115300-3115319 | Msa0711260:intron | 25.0% |
! | TCTGTAAATACATTTGGAAA+TGG | - | chr5_1:3115421-3115440 | Msa0711260:intron | 25.0% |
! | AATGGTTTATATGATTCCAT+TGG | - | chr5_1:3115439-3115458 | Msa0711260:intron | 25.0% |
!! | ATTGTTGTTGTTATTAACAG+AGG | - | chr5_1:3116015-3116034 | Msa0711260:intron | 25.0% |
!! | TATGGATTGTCTAATAACAA+TGG | - | chr5_1:3116118-3116137 | Msa0711260:CDS | 25.0% |
! | CTTATTAAGATGAATAAGTG+GGG | + | chr5_1:3116207-3116226 | None:intergenic | 25.0% |
! | CACTTATTAAGATGAATAAG+TGG | + | chr5_1:3116209-3116228 | None:intergenic | 25.0% |
! | TGTCATAAAAATAAGTCACA+TGG | + | chr5_1:3116471-3116490 | None:intergenic | 25.0% |
! | CAAGTATTAAGAAAAGTTCT+TGG | - | chr5_1:3116641-3116660 | Msa0711260:intron | 25.0% |
! | CTAAGGTCATAATAATAACA+TGG | - | chr5_1:3116909-3116928 | Msa0711260:intron | 25.0% |
! | ACAAGTAAATCAATCCAAAT+GGG | - | chr5_1:3117024-3117043 | Msa0711260:intron | 25.0% |
!!! | AGTGCAATTTGATTTTTTGT+AGG | - | chr5_1:3117213-3117232 | Msa0711260:intron | 25.0% |
!!! | GAAGTATTTTACAGTAGTTA+AGG | + | chr5_1:3117391-3117410 | None:intergenic | 25.0% |
! | ATTATATCTTCATAAAGCCT+AGG | + | chr5_1:3117585-3117604 | None:intergenic | 25.0% |
! | ATTGAAGAGATAGAACAAAT+AGG | - | chr5_1:3117603-3117622 | Msa0711260:CDS | 25.0% |
! | TTGAAGAGATAGAACAAATA+GGG | - | chr5_1:3117604-3117623 | Msa0711260:CDS | 25.0% |
!!! | ATTTCTATTTTTTCCCCAAT+GGG | + | chr5_1:3117652-3117671 | None:intergenic | 25.0% |
! | AAATAGAAATGTAGGATTTG+TGG | - | chr5_1:3117662-3117681 | Msa0711260:CDS | 25.0% |
! | AATAGAAATGTAGGATTTGT+GGG | - | chr5_1:3117663-3117682 | Msa0711260:CDS | 25.0% |
ATTAGTAGTCCATTATCATC+AGG | + | chr5_1:3113942-3113961 | None:intergenic | 30.0% | |
TGTCAAATTGTTGAGAATGA+CGG | - | chr5_1:3113998-3114017 | Msa0711260:CDS | 30.0% | |
ATTGAGAGAGATCATTAATG+AGG | - | chr5_1:3114037-3114056 | Msa0711260:CDS | 30.0% | |
! | TTAGTGTGCCTAAGTTATTT+TGG | + | chr5_1:3114522-3114541 | None:intergenic | 30.0% |
AAGTCTAGTAGTAAAAACAG+TGG | - | chr5_1:3114546-3114565 | Msa0711260:intron | 30.0% | |
CGGATCTTGAGTTAAAATAT+TGG | - | chr5_1:3114569-3114588 | Msa0711260:intron | 30.0% | |
TTAAAAAAGAACGTGCATGA+GGG | + | chr5_1:3114718-3114737 | None:intergenic | 30.0% | |
ATTAAAAAAGAACGTGCATG+AGG | + | chr5_1:3114719-3114738 | None:intergenic | 30.0% | |
ACTATATAAGGAAATACTGG+GGG | - | chr5_1:3114950-3114969 | Msa0711260:intron | 30.0% | |
! | ACACTTATCTTTTTACTCAG+TGG | + | chr5_1:3115011-3115030 | None:intergenic | 30.0% |
!! | TCACTTGTGTCTGAAATTTT+TGG | - | chr5_1:3115058-3115077 | Msa0711260:intron | 30.0% |
!! | TACAAGTTACACTCTAGTTT+TGG | - | chr5_1:3115181-3115200 | Msa0711260:intron | 30.0% |
!!! | ACAAGTTACACTCTAGTTTT+GGG | - | chr5_1:3115182-3115201 | Msa0711260:intron | 30.0% |
TTTATAGGTTACCCTACAAT+TGG | - | chr5_1:3115246-3115265 | Msa0711260:intron | 30.0% | |
! | GGTGATGAATTGATTACTTT+TGG | - | chr5_1:3115322-3115341 | Msa0711260:intron | 30.0% |
ATTTGGATACCATGTTACAT+CGG | + | chr5_1:3115365-3115384 | None:intergenic | 30.0% | |
ATGGTATCCAAATCAACAAA+AGG | - | chr5_1:3115372-3115391 | Msa0711260:intron | 30.0% | |
!! | TAAAGAGCCTTTTGTTGATT+TGG | + | chr5_1:3115382-3115401 | None:intergenic | 30.0% |
GTTCGAACTAAGTATTTAGA+AGG | + | chr5_1:3116336-3116355 | None:intergenic | 30.0% | |
AAACGGATCTAGAAATTTGT+AGG | - | chr5_1:3116801-3116820 | Msa0711260:intron | 30.0% | |
! | TTGGATTGATTTACTTGTGT+TGG | + | chr5_1:3117022-3117041 | None:intergenic | 30.0% |
CACAAGTAAATCAATCCAAA+TGG | - | chr5_1:3117023-3117042 | Msa0711260:intron | 30.0% | |
!!! | GACTTATTTTGAAACCCATT+TGG | + | chr5_1:3117041-3117060 | None:intergenic | 30.0% |
AATGCTGTATCGTAATTGAA+TGG | + | chr5_1:3117360-3117379 | None:intergenic | 30.0% | |
! | TGTTAAAAAGCTTGTTCAGT+TGG | - | chr5_1:3117419-3117438 | Msa0711260:CDS | 30.0% |
CAAATAGGGTTGTTCAAATA+TGG | - | chr5_1:3117618-3117637 | Msa0711260:CDS | 30.0% | |
!!! | TTTCTATTTTTTCCCCAATG+GGG | + | chr5_1:3117651-3117670 | None:intergenic | 30.0% |
!!! | CATTTCTATTTTTTCCCCAA+TGG | + | chr5_1:3117653-3117672 | None:intergenic | 30.0% |
TGGGGAAAAAATAGAAATGT+AGG | - | chr5_1:3117654-3117673 | Msa0711260:CDS | 30.0% | |
ATAGAAATGTAGGATTTGTG+GGG | - | chr5_1:3117664-3117683 | Msa0711260:CDS | 30.0% | |
! | TAAGGCAAATAGGTTTTTGA+AGG | - | chr5_1:3117704-3117723 | Msa0711260:CDS | 30.0% |
GGAGTGACAATATTAAAAGA+TGG | - | chr5_1:3117798-3117817 | Msa0711260:CDS | 30.0% | |
ATTAAAAGATGGATGTGCAT+TGG | - | chr5_1:3117809-3117828 | Msa0711260:CDS | 30.0% | |
!!! | TGACATCGATTTTCAACACA+CGG | + | chr5_1:3113983-3114002 | None:intergenic | 35.0% |
ATGTGTTACATACTCATGCA+CGG | + | chr5_1:3114174-3114193 | None:intergenic | 35.0% | |
ATGTGAAGATGGATATGCTA+AGG | - | chr5_1:3114217-3114236 | Msa0711260:CDS | 35.0% | |
AATGCAGCCAGAATTTCTTT+AGG | - | chr5_1:3114272-3114291 | Msa0711260:CDS | 35.0% | |
ATGCAGCCAGAATTTCTTTA+GGG | - | chr5_1:3114273-3114292 | Msa0711260:CDS | 35.0% | |
AAGAACCCCTAAAGAAATTC+TGG | + | chr5_1:3114282-3114301 | None:intergenic | 35.0% | |
! | AGAATTTCTTTAGGGGTTCT+TGG | - | chr5_1:3114281-3114300 | Msa0711260:CDS | 35.0% |
TCTAGTAGTAAAAACAGTGG+CGG | - | chr5_1:3114549-3114568 | Msa0711260:intron | 35.0% | |
ACAATTATTAACAACTGGCC+TGG | - | chr5_1:3114645-3114664 | Msa0711260:intron | 35.0% | |
TAAAAAAGAACGTGCATGAG+GGG | + | chr5_1:3114717-3114736 | None:intergenic | 35.0% | |
! | CTTATCTTTTTACTCAGTGG+CGG | + | chr5_1:3115008-3115027 | None:intergenic | 35.0% |
ATGAATTTGCCGATGTAACA+TGG | - | chr5_1:3115353-3115372 | Msa0711260:intron | 35.0% | |
CGTGTCTCTGTAAATACATT+TGG | - | chr5_1:3115415-3115434 | Msa0711260:intron | 35.0% | |
! | AGTTCTAGCAAGTGTTAATG+TGG | + | chr5_1:3115485-3115504 | None:intergenic | 35.0% |
! | TTAACACTTGCTAGAACTAC+AGG | - | chr5_1:3115487-3115506 | Msa0711260:CDS | 35.0% |
AAAGTTGACCACTGAAACAT+TGG | - | chr5_1:3116084-3116103 | Msa0711260:intron | 35.0% | |
TCACACTCTCACTTAATGAA+TGG | - | chr5_1:3116262-3116281 | Msa0711260:CDS | 35.0% | |
AACAACCGAATACAATCATC+AGG | - | chr5_1:3117267-3117286 | Msa0711260:intron | 35.0% | |
ACAACCGAATACAATCATCA+GGG | - | chr5_1:3117268-3117287 | Msa0711260:intron | 35.0% | |
ATGTCCCTGATGATTGTATT+CGG | + | chr5_1:3117275-3117294 | None:intergenic | 35.0% | |
AAATGAGCACAGCTTGTATA+GGG | - | chr5_1:3117316-3117335 | Msa0711260:CDS | 35.0% | |
TATAGGGGACTCAAGAATTA+AGG | - | chr5_1:3117332-3117351 | Msa0711260:CDS | 35.0% | |
ATAGGGGACTCAAGAATTAA+GGG | - | chr5_1:3117333-3117352 | Msa0711260:CDS | 35.0% | |
TGTGGCTTAGAATTGTACAA+TGG | - | chr5_1:3117456-3117475 | Msa0711260:CDS | 35.0% | |
TGCGTTATGTTACAACTTCT+AGG | - | chr5_1:3117487-3117506 | Msa0711260:CDS | 35.0% | |
GCGTTATGTTACAACTTCTA+GGG | - | chr5_1:3117488-3117507 | Msa0711260:CDS | 35.0% | |
ATAGGGTTGTTCAAATATGG+AGG | - | chr5_1:3117621-3117640 | Msa0711260:CDS | 35.0% | |
TAGGGTTGTTCAAATATGGA+GGG | - | chr5_1:3117622-3117641 | Msa0711260:CDS | 35.0% | |
TAGAAATGTAGGATTTGTGG+GGG | - | chr5_1:3117665-3117684 | Msa0711260:CDS | 35.0% | |
TCACTAGAGAAAAGTCTCTT+CGG | + | chr5_1:3117747-3117766 | None:intergenic | 35.0% | |
! | AGAGACTTTTCTCTAGTGAT+TGG | - | chr5_1:3117748-3117767 | Msa0711260:CDS | 35.0% |
!!! | CTTTTTTAAGTCCAAGCACT+TGG | + | chr5_1:3117779-3117798 | None:intergenic | 35.0% |
CAAGTGCTTGGACTTAAAAA+AGG | - | chr5_1:3117777-3117796 | Msa0711260:CDS | 35.0% | |
!!! | CTGCAGAAGTAGTTCTTTTT+TGG | + | chr5_1:3117873-3117892 | None:intergenic | 35.0% |
CAGAATCTATAAGGATGCAA+GGG | - | chr5_1:3117899-3117918 | Msa0711260:CDS | 35.0% | |
TGCACCATCACGAATTCATA+TGG | - | chr5_1:3113762-3113781 | Msa0711260:CDS | 40.0% | |
! | CTAGCTTGTCCTGATGATAA+TGG | - | chr5_1:3113930-3113949 | Msa0711260:CDS | 40.0% |
AGATCATTAATGAGGCTGCA+AGG | - | chr5_1:3114045-3114064 | Msa0711260:CDS | 40.0% | |
CTCTGCCAAATACACCATAT+TGG | - | chr5_1:3114078-3114097 | Msa0711260:CDS | 40.0% | |
TGCCAAATACACCATATTGG+TGG | - | chr5_1:3114081-3114100 | Msa0711260:CDS | 40.0% | |
GCCAAATACACCATATTGGT+GGG | - | chr5_1:3114082-3114101 | Msa0711260:CDS | 40.0% | |
CCAAATACACCATATTGGTG+GGG | - | chr5_1:3114083-3114102 | Msa0711260:CDS | 40.0% | |
ATGGTTAAACCCCACCAATA+TGG | + | chr5_1:3114095-3114114 | None:intergenic | 40.0% | |
TATTGGTGGGGTTTAACCAT+TGG | - | chr5_1:3114095-3114114 | Msa0711260:CDS | 40.0% | |
! | TGCTCATGGAAGTACATTGT+GGG | - | chr5_1:3114136-3114155 | Msa0711260:CDS | 40.0% |
ATCCATCTTCACATTCTGCA+GGG | + | chr5_1:3114211-3114230 | None:intergenic | 40.0% | |
TATCCATCTTCACATTCTGC+AGG | + | chr5_1:3114212-3114231 | None:intergenic | 40.0% | |
! | TTCTGGCTGCATTAAGATCT+TGG | + | chr5_1:3114265-3114284 | None:intergenic | 40.0% |
TGCAGCCAGAATTTCTTTAG+GGG | - | chr5_1:3114274-3114293 | Msa0711260:CDS | 40.0% | |
!! | GGTTCTTGGAGTTATTTCTC+AGG | - | chr5_1:3114295-3114314 | Msa0711260:CDS | 40.0% |
! | ATTATTAACAACTGGCCTGG+TGG | - | chr5_1:3114648-3114667 | Msa0711260:intron | 40.0% |
AAATTGCCTGGAAACAGCAA+GGG | - | chr5_1:3114674-3114693 | Msa0711260:intron | 40.0% | |
TGTAAGAGATCGCTTGAAGA+GGG | + | chr5_1:3115275-3115294 | None:intergenic | 40.0% | |
ATGTAAGAGATCGCTTGAAG+AGG | + | chr5_1:3115276-3115295 | None:intergenic | 40.0% | |
CACTCCCAAGCTAAAGATAT+CGG | + | chr5_1:3115947-3115966 | None:intergenic | 40.0% | |
GAAGCAACACACGATACTAA+CGG | - | chr5_1:3116046-3116065 | Msa0711260:intron | 40.0% | |
TATCGAACCTGATACTTGAG+AGG | - | chr5_1:3116976-3116995 | Msa0711260:intron | 40.0% | |
TTTATTGGATACCCCGTTGT+TGG | - | chr5_1:3117240-3117259 | Msa0711260:intron | 40.0% | |
TCGGTTGTTGAATCCAACAA+CGG | + | chr5_1:3117256-3117275 | None:intergenic | 40.0% | |
ACAATCATCAGGGACATGTT+TGG | - | chr5_1:3117278-3117297 | Msa0711260:intron | 40.0% | |
AGGGACATGTTTGGATAGTT+TGG | - | chr5_1:3117287-3117306 | Msa0711260:CDS | 40.0% | |
CAAATGAGCACAGCTTGTAT+AGG | - | chr5_1:3117315-3117334 | Msa0711260:CDS | 40.0% | |
AATGAGCACAGCTTGTATAG+GGG | - | chr5_1:3117317-3117336 | Msa0711260:CDS | 40.0% | |
!! | TACAACTTCTAGGGCATACT+TGG | - | chr5_1:3117497-3117516 | Msa0711260:CDS | 40.0% |
!! | ACAACTTCTAGGGCATACTT+GGG | - | chr5_1:3117498-3117517 | Msa0711260:CDS | 40.0% |
TCATAAAGCCTAGGAGTCAA+TGG | + | chr5_1:3117576-3117595 | None:intergenic | 40.0% | |
AAAGATGGATGTGCATTGGA+AGG | - | chr5_1:3117813-3117832 | Msa0711260:CDS | 40.0% | |
AAGATGGATGTGCATTGGAA+GGG | - | chr5_1:3117814-3117833 | Msa0711260:CDS | 40.0% | |
GCAGAATCTATAAGGATGCA+AGG | - | chr5_1:3117898-3117917 | Msa0711260:CDS | 40.0% | |
ATAAGGATGCAAGGGTTTGT+AGG | - | chr5_1:3117907-3117926 | Msa0711260:CDS | 40.0% | |
GAACACTGAATTGGATCTGC+TGG | + | chr5_1:3113726-3113745 | None:intergenic | 45.0% | |
CACGCCATATGAATTCGTGA+TGG | + | chr5_1:3113769-3113788 | None:intergenic | 45.0% | |
AGCTCTGCAAATGCTTCGAT+CGG | + | chr5_1:3113796-3113815 | None:intergenic | 45.0% | |
AAGCATTTGCAGAGCTAGCA+AGG | - | chr5_1:3113800-3113819 | Msa0711260:CDS | 45.0% | |
GGTTATGTATCCAACCACAG+AGG | - | chr5_1:3113821-3113840 | Msa0711260:CDS | 45.0% | |
TATGTATCCAACCACAGAGG+CGG | - | chr5_1:3113824-3113843 | Msa0711260:CDS | 45.0% | |
! | TCATCAGGACAAGCTAGCTT+TGG | + | chr5_1:3113927-3113946 | None:intergenic | 45.0% |
TTGAGAATGACGGTAGAGAG+CGG | - | chr5_1:3114008-3114027 | Msa0711260:CDS | 45.0% | |
TGAGGCTGCAAGGTTTGAAA+TGG | - | chr5_1:3114055-3114074 | Msa0711260:CDS | 45.0% | |
CCCCACCAATATGGTGTATT+TGG | + | chr5_1:3114086-3114105 | None:intergenic | 45.0% | |
AGTGCTAATTAGGCCACCAA+TGG | + | chr5_1:3114114-3114133 | None:intergenic | 45.0% | |
! | ATTGGTGGCCTAATTAGCAC+TGG | - | chr5_1:3114113-3114132 | Msa0711260:CDS | 45.0% |
CATGAGCACCAGTGCTAATT+AGG | + | chr5_1:3114124-3114143 | None:intergenic | 45.0% | |
!! | CTAATTAGCACTGGTGCTCA+TGG | - | chr5_1:3114122-3114141 | Msa0711260:CDS | 45.0% |
! | GTGCTCATGGAAGTACATTG+TGG | - | chr5_1:3114135-3114154 | Msa0711260:CDS | 45.0% |
! | GCTCATGGAAGTACATTGTG+GGG | - | chr5_1:3114137-3114156 | Msa0711260:CDS | 45.0% |
! | GGAAGTACATTGTGGGGTAA+AGG | - | chr5_1:3114143-3114162 | Msa0711260:CDS | 45.0% |
CAAATTGCCTGGAAACAGCA+AGG | - | chr5_1:3114673-3114692 | Msa0711260:intron | 45.0% | |
TGGAAACAGCAAGGGAACAT+GGG | - | chr5_1:3114682-3114701 | Msa0711260:intron | 45.0% | |
ATAAGTTGCCGAATTGCCGA+AGG | + | chr5_1:3114875-3114894 | None:intergenic | 45.0% | |
TTCGGCAATTCGGCAACTTA+TGG | - | chr5_1:3114874-3114893 | Msa0711260:intron | 45.0% | |
GAAGAGGGGTTCCAATTGTA+GGG | + | chr5_1:3115260-3115279 | None:intergenic | 45.0% | |
TGAAGAGGGGTTCCAATTGT+AGG | + | chr5_1:3115261-3115280 | None:intergenic | 45.0% | |
GTAAGAGATCGCTTGAAGAG+GGG | + | chr5_1:3115274-3115293 | None:intergenic | 45.0% | |
ACCGACCGATATCTTTAGCT+TGG | - | chr5_1:3115939-3115958 | Msa0711260:intron | 45.0% | |
CCCAAGCTAAAGATATCGGT+CGG | + | chr5_1:3115943-3115962 | None:intergenic | 45.0% | |
! | CCGACCGATATCTTTAGCTT+GGG | - | chr5_1:3115940-3115959 | Msa0711260:intron | 45.0% |
!! | CGATATCTTTAGCTTGGGAG+TGG | - | chr5_1:3115945-3115964 | Msa0711260:intron | 45.0% |
TTGACCACTGAAACATTGGC+AGG | - | chr5_1:3116088-3116107 | Msa0711260:intron | 45.0% | |
AATGCCTGCCAATGTTTCAG+TGG | + | chr5_1:3116095-3116114 | None:intergenic | 45.0% | |
! | ACATTGGCAGGCATTGCTTA+TGG | - | chr5_1:3116100-3116119 | Msa0711260:CDS | 45.0% |
GAGTCATCCTCTCAAGTATC+AGG | + | chr5_1:3116986-3117005 | None:intergenic | 45.0% | |
GGTTGTTGAATCCAACAACG+GGG | + | chr5_1:3117254-3117273 | None:intergenic | 45.0% | |
CGGTTGTTGAATCCAACAAC+GGG | + | chr5_1:3117255-3117274 | None:intergenic | 45.0% | |
GGGAAAAACAGAAGATGCTG+TGG | - | chr5_1:3117518-3117537 | Msa0711260:CDS | 45.0% | |
GAGTCAATGGATCTTTGCTG+CGG | + | chr5_1:3117563-3117582 | None:intergenic | 45.0% | |
!! | GCAAAGATCCATTGACTCCT+AGG | - | chr5_1:3117565-3117584 | Msa0711260:CDS | 45.0% |
AATATGGAGGGTTACCCCAT+TGG | - | chr5_1:3117634-3117653 | Msa0711260:CDS | 45.0% | |
ATATGGAGGGTTACCCCATT+GGG | - | chr5_1:3117635-3117654 | Msa0711260:CDS | 45.0% | |
AAGAACTACTTCTGCAGACC+AGG | - | chr5_1:3117876-3117895 | Msa0711260:CDS | 45.0% | |
CAGACCAGGCAGAATCTATA+AGG | - | chr5_1:3117890-3117909 | Msa0711260:CDS | 45.0% | |
GCATCCTTATAGATTCTGCC+TGG | + | chr5_1:3117897-3117916 | None:intergenic | 45.0% | |
!!! | ATAAGAAAAATATTATTTTA+TGG | + | chr5_1:3115845-3115864 | None:intergenic | 5.0% |
!!! | ATAAAATTTAATATATTTTG+AGG | + | chr5_1:3116306-3116325 | None:intergenic | 5.0% |
CACTGAATTGGATCTGCTGG+AGG | + | chr5_1:3113723-3113742 | None:intergenic | 50.0% | |
CTCTGCAAATGCTTCGATCG+GGG | + | chr5_1:3113794-3113813 | None:intergenic | 50.0% | |
GCTCTGCAAATGCTTCGATC+GGG | + | chr5_1:3113795-3113814 | None:intergenic | 50.0% | |
TGGTGGGGTTTAACCATTGG+TGG | - | chr5_1:3114098-3114117 | Msa0711260:CDS | 50.0% | |
AGCCCTGCAGAATGTGAAGA+TGG | - | chr5_1:3114206-3114225 | Msa0711260:CDS | 50.0% | |
!!! | TTGGGGGTGCCAAACTTTTG+TGG | - | chr5_1:3114588-3114607 | Msa0711260:intron | 50.0% |
TCCAGGCAATTTGTACCACC+AGG | + | chr5_1:3114666-3114685 | None:intergenic | 50.0% | |
!! | CATGTTCCCTTGCTGTTTCC+AGG | + | chr5_1:3114683-3114702 | None:intergenic | 50.0% |
CTGGAAACAGCAAGGGAACA+TGG | - | chr5_1:3114681-3114700 | Msa0711260:intron | 50.0% | |
! | AGTGTTGAACCCGCAACCTT+CGG | - | chr5_1:3114856-3114875 | Msa0711260:intron | 50.0% |
TCGTGGCTTCAGCGAAAAGA+GGG | + | chr5_1:3114902-3114921 | None:intergenic | 50.0% | |
TTCGTGGCTTCAGCGAAAAG+AGG | + | chr5_1:3114903-3114922 | None:intergenic | 50.0% | |
!! | TACTCAGTGGCGGATCTCTT+TGG | + | chr5_1:3114998-3115017 | None:intergenic | 50.0% |
!! | AGGTGTTGAGCGAAGTCCAA+TGG | + | chr5_1:3115458-3115477 | None:intergenic | 50.0% |
TGGACTTCGCTCAACACCTT+CGG | - | chr5_1:3115459-3115478 | Msa0711260:CDS | 50.0% | |
GCAAGTGTTAATGTGGCCGA+AGG | + | chr5_1:3115478-3115497 | None:intergenic | 50.0% | |
GCTTGTTCAGTTGGAGCCAA+AGG | - | chr5_1:3117428-3117447 | Msa0711260:CDS | 50.0% | |
TCTAAGCCACACAGTGCCTT+TGG | + | chr5_1:3117447-3117466 | None:intergenic | 50.0% | |
TATGGAGGGTTACCCCATTG+GGG | - | chr5_1:3117636-3117655 | Msa0711260:CDS | 50.0% | |
GATTGGACAGACCAAGTGCT+TGG | - | chr5_1:3117765-3117784 | Msa0711260:CDS | 50.0% | |
TGATATGAGCTCCGCCTCTG+TGG | + | chr5_1:3113838-3113857 | None:intergenic | 55.0% | |
GCCTGGTGGTACAAATTGCC+TGG | - | chr5_1:3114662-3114681 | Msa0711260:intron | 55.0% | |
ACCCGCAACCTTCGGCAATT+CGG | - | chr5_1:3114864-3114883 | Msa0711260:intron | 55.0% | |
TGCCGAATTGCCGAAGGTTG+CGG | + | chr5_1:3114869-3114888 | None:intergenic | 55.0% | |
!! | TCAGTGGCGGATCTCTTTGG+TGG | + | chr5_1:3114995-3115014 | None:intergenic | 55.0% |
!! | TTGGAGCCAAAGGCACTGTG+TGG | - | chr5_1:3117438-3117457 | Msa0711260:CDS | 55.0% |
ATGAGCTCCGCCTCTGTGGT+TGG | + | chr5_1:3113834-3113853 | None:intergenic | 60.0% | |
GCCGAATTGCCGAAGGTTGC+GGG | + | chr5_1:3114868-3114887 | None:intergenic | 60.0% | |
GGAAATACTGGGGGTTGCCG+TGG | - | chr5_1:3114959-3114978 | Msa0711260:intron | 60.0% | |
! | TGGCGGATCTCTTTGGTGGC+GGG | + | chr5_1:3114991-3115010 | None:intergenic | 60.0% |
!! | GTGGCGGATCTCTTTGGTGG+CGG | + | chr5_1:3114992-3115011 | None:intergenic | 60.0% |
!! | ATCTCTTTGGTGGCGGGCGG+GGG | + | chr5_1:3114985-3115004 | None:intergenic | 65.0% |
!! | GATCTCTTTGGTGGCGGGCG+GGG | + | chr5_1:3114986-3115005 | None:intergenic | 65.0% |
!! | GGATCTCTTTGGTGGCGGGC+GGG | + | chr5_1:3114987-3115006 | None:intergenic | 65.0% |
!! | CGGATCTCTTTGGTGGCGGG+CGG | + | chr5_1:3114988-3115007 | None:intergenic | 65.0% |
!!! | TTGGTGGCGGGCGGGGGCCA+CGG | + | chr5_1:3114979-3114998 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_1 | gene | 3113651 | 3117947 | 3113651 | ID=Msa0711260;Name=Msa0711260 |
chr5_1 | mRNA | 3113651 | 3117947 | 3113651 | ID=Msa0711260-mRNA-1;Parent=Msa0711260;Name=Msa0711260-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|4|0|579 |
chr5_1 | exon | 3117282 | 3117947 | 3117282 | ID=Msa0711260-mRNA-1:exon:1139;Parent=Msa0711260-mRNA-1 |
chr5_1 | exon | 3116090 | 3116345 | 3116090 | ID=Msa0711260-mRNA-1:exon:1138;Parent=Msa0711260-mRNA-1 |
chr5_1 | exon | 3115459 | 3115563 | 3115459 | ID=Msa0711260-mRNA-1:exon:1137;Parent=Msa0711260-mRNA-1 |
chr5_1 | exon | 3113651 | 3114363 | 3113651 | ID=Msa0711260-mRNA-1:exon:1136;Parent=Msa0711260-mRNA-1 |
chr5_1 | CDS | 3117282 | 3117947 | 3117282 | ID=Msa0711260-mRNA-1:cds;Parent=Msa0711260-mRNA-1 |
chr5_1 | CDS | 3116090 | 3116345 | 3116090 | ID=Msa0711260-mRNA-1:cds;Parent=Msa0711260-mRNA-1 |
chr5_1 | CDS | 3115459 | 3115563 | 3115459 | ID=Msa0711260-mRNA-1:cds;Parent=Msa0711260-mRNA-1 |
chr5_1 | CDS | 3113651 | 3114363 | 3113651 | ID=Msa0711260-mRNA-1:cds;Parent=Msa0711260-mRNA-1 |
Gene Sequence |
Protein sequence |