AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0035390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0035390 MtrunA17_Chr1g0197621 97.784 1038 15 1 1 1030 1 1038 0.0 2090
Msa0035390 MtrunA17_Chr8g0348021 41.253 926 513 13 117 1029 96 1003 0.0 757
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0035390 AT5G04480.1 62.154 1049 358 10 12 1029 9 1049 0.0 1298
Msa0035390 AT5G04480.2 60.915 1049 356 11 12 1029 9 1034 0.0 1259
Msa0035390 AT4G01210.1 36.653 1004 566 17 61 1029 39 1007 0.0 657

Find 262 sgRNAs with CRISPR-Local

Find 681 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCCCGAATGAAGCAAAAT+TGG 0.181702 1_1:+63559493 None:intergenic
TCTAAATTTGCTCAAGCTAT+TGG 0.207194 1_1:-63562687 Msa0035390:CDS
CTTGCTTTGGATTGCATAAC+TGG 0.211103 1_1:-63562633 Msa0035390:CDS
GATGCCAACCCCTTCTTTCC+TGG 0.229052 1_1:-63560233 Msa0035390:CDS
TTTACACACACATGCACTTA+TGG 0.244373 1_1:-63559518 Msa0035390:three_prime_UTR
GTTTCGCAGAGGTTTCTTTC+TGG 0.255127 1_1:-63568423 Msa0035390:CDS
CATCATCAGAGCTTTGTCTT+TGG 0.267520 1_1:+63561348 None:intergenic
CTCAGAGAACTTAGTGGATT+TGG 0.269413 1_1:-63563671 Msa0035390:CDS
TATCTAGTTCTATTTCATTC+TGG 0.271281 1_1:+63562508 None:intergenic
CATGGTTCTATAAGACATTA+TGG 0.281000 1_1:-63563049 Msa0035390:CDS
ATCATCAGAGCTTTGTCTTT+GGG 0.297197 1_1:+63561349 None:intergenic
TGGTTATGATGACGCTTTAC+AGG 0.297983 1_1:-63563477 Msa0035390:intron
TCTCTTCGCCTTTGCTTCAA+TGG 0.302593 1_1:-63568553 Msa0035390:CDS
ACAAGACGAACTGACCAAAT+TGG 0.303879 1_1:-63562358 Msa0035390:CDS
TCTTCCAAAGAGCCAGTATT+AGG 0.315674 1_1:+63559842 None:intergenic
TGGAACTTCTTATCAATGTA+TGG 0.325188 1_1:-63559901 Msa0035390:CDS
AAATCCTAATACTGGCTCTT+TGG 0.325569 1_1:-63559846 Msa0035390:CDS
AGTGGAAGCTGAAAGGGTTT+TGG 0.327192 1_1:-63560820 Msa0035390:CDS
TCAATGTGTGATATCTTAAA+TGG 0.328784 1_1:-63560693 Msa0035390:CDS
GGGGACGCTTGGACCTGGAC+GGG 0.331415 1_1:-63560752 Msa0035390:CDS
TTTGTTCAGTACCATTGATA+TGG 0.333483 1_1:-63564062 Msa0035390:CDS
GTCATTGCTCTGATTAATAA+TGG 0.334548 1_1:+63562944 None:intergenic
TTTCTTAACACGGGAAAATC+AGG 0.335797 1_1:+63562899 None:intergenic
CAGATTGATGATGGGGTTCA+TGG 0.342486 1_1:-63562783 Msa0035390:CDS
GGGACGCTTGGACCTGGACG+GGG 0.344611 1_1:-63560751 Msa0035390:CDS
AACTGGCTATGCAAGACTTC+TGG 0.346582 1_1:-63562616 Msa0035390:CDS
TAGGAAGTTGCTTCACGTTT+GGG 0.348116 1_1:-63563079 Msa0035390:CDS
AGTACGCTTAAGTTTGTTCC+TGG 0.350389 1_1:-63568450 Msa0035390:CDS
AAAGCATTCATCAAAGCTTC+AGG 0.351111 1_1:+63562738 None:intergenic
ATAGCTGATATTGTCCTATA+TGG 0.353804 1_1:-63562995 Msa0035390:CDS
GGGAAAATTGTCTAGCGAAT+TGG 0.356858 1_1:-63559476 Msa0035390:three_prime_UTR
GTTATAGGTTGAAGAGAGGT+TGG 0.363701 1_1:-63562125 Msa0035390:intron
TCTTCTATGATGACCTATCT+TGG 0.364451 1_1:-63563610 Msa0035390:CDS
TCTTCCAGTTTACAAACAAA+TGG 0.365695 1_1:-63564010 Msa0035390:CDS
ATCAATGGTACTGAACAAAA+AGG 0.368158 1_1:+63564066 None:intergenic
GGGCAGCGCTTCAGCATGGG+GGG 0.370438 1_1:+63560303 None:intergenic
GTAGGAAGTTGCTTCACGTT+TGG 0.372801 1_1:-63563080 Msa0035390:intron
AAATACAGCATGTGCTTGTT+AGG 0.375343 1_1:-63560035 Msa0035390:CDS
GGAGAAAGATGTTGGTGTTT+GGG 0.375460 1_1:-63562104 Msa0035390:CDS
TTGGTCAGTTCGTCTTGTAT+TGG 0.378230 1_1:+63562363 None:intergenic
CAACCCATTTGTTTGTAAAC+TGG 0.379089 1_1:+63564006 None:intergenic
CCGTGACATTCTCTGTGAAA+TGG 0.381513 1_1:-63561282 Msa0035390:CDS
TCCATCCCCATGCTACTTGT+TGG 0.383523 1_1:+63562538 None:intergenic
CTCTCTCTCTTCCCTAAGTC+CGG 0.384490 1_1:-63568606 Msa0035390:CDS
CTCCCCTTCATCCCGCTCAT+TGG 0.384643 1_1:+63562033 None:intergenic
CTTCGTGAAGGTCTTGAGTT+TGG 0.387344 1_1:-63568474 Msa0035390:CDS
TCAACAAACTTCCTTGAGAA+TGG 0.387518 1_1:-63562396 Msa0035390:CDS
CATACATCTACTGGCGATCC+AGG 0.391839 1_1:+63563734 None:intergenic
TTTCGCAGAGGTTTCTTTCT+GGG 0.392400 1_1:-63568422 Msa0035390:CDS
TTCAACTCTCAGATTGATGA+TGG 0.392554 1_1:-63562792 Msa0035390:intron
CAGAGGTTTCTTTCTGGGGA+TGG 0.395520 1_1:-63568417 Msa0035390:CDS
GCTCAAGCTATTGGATCATC+TGG 0.396913 1_1:-63562678 Msa0035390:CDS
TCGCACCTCCTCGTCGCAAC+CGG 0.397697 1_1:-63568799 Msa0035390:CDS
TTCACAGGAGGCCTTGGATT+GGG 0.399405 1_1:-63561223 Msa0035390:CDS
AAGAATGTCCCAGTCCAATT+TGG 0.402386 1_1:+63562344 None:intergenic
ATAAGACATTATGGCTTGAA+TGG 0.402981 1_1:-63563040 Msa0035390:CDS
TGGAGAAAGATGTTGGTGTT+TGG 0.405814 1_1:-63562105 Msa0035390:CDS
CAGTGCACCTCTCCTGTCAT+TGG 0.406633 1_1:+63559686 None:intergenic
GTGGGAACGCTCGCTCCATA+TGG 0.408279 1_1:-63566245 Msa0035390:CDS
AATTCAGAATCTACAGAAGT+TGG 0.408870 1_1:-63566529 Msa0035390:CDS
GACCAATAACCACCATCTTC+AGG 0.409144 1_1:+63560274 None:intergenic
AAGTGCATTGTTGCTTCCTA+TGG 0.410907 1_1:+63560725 None:intergenic
ATAGTATTCACAGGAGGCCT+TGG 0.412392 1_1:-63561229 Msa0035390:CDS
GTATATATAAATCCTAATAC+TGG 0.418914 1_1:-63559854 Msa0035390:CDS
GTATAGTCAGTAAACATTAG+TGG 0.418930 1_1:-63559159 Msa0035390:three_prime_UTR
CCTTCAGATTCTTTACTACC+TGG 0.422303 1_1:-63562576 Msa0035390:CDS
TGCCTGAAGATGGTGGTTAT+TGG 0.422487 1_1:-63560276 Msa0035390:CDS
CTTGGATTGGGTTTCAGTCA+TGG 0.424210 1_1:-63561211 Msa0035390:CDS
TTCCCGAATGAAGCAAAATT+GGG 0.427241 1_1:+63559494 None:intergenic
AACAGCAAGGCCAGATTGAT+TGG 0.427252 1_1:-63566185 Msa0035390:CDS
TGGGGACGCTTGGACCTGGA+CGG 0.429835 1_1:-63560753 Msa0035390:CDS
AGTAACCAACATCAATGATT+GGG 0.433573 1_1:+63566554 None:intergenic
ATTGGTCAGCACTGCACAGT+TGG 0.434616 1_1:-63560258 Msa0035390:CDS
CGTGACATTCTCTGTGAAAT+GGG 0.436176 1_1:-63561281 Msa0035390:CDS
TTTACCGGATAAGTAAAATC+TGG 0.436938 1_1:+63563925 None:intergenic
ACTTGTTGGATTTGAGAAAC+AGG 0.439049 1_1:+63562552 None:intergenic
GGATGGACTTGATCGCTTGA+GGG 0.439773 1_1:-63568400 Msa0035390:CDS
GGGGCAGCGCTTCAGCATGG+GGG 0.442035 1_1:+63560302 None:intergenic
GTCTCTGTGAAAAGCATCAA+TGG 0.442608 1_1:+63560064 None:intergenic
GGCCACAACCACTTATCCCT+TGG 0.446071 1_1:+63559707 None:intergenic
ATTGTCAGTGGAAGCTGAAA+GGG 0.446114 1_1:-63560826 Msa0035390:CDS
GGCAGCGCTTCAGCATGGGG+GGG 0.446134 1_1:+63560304 None:intergenic
CTTCCAGTTTACAAACAAAT+GGG 0.447202 1_1:-63564009 Msa0035390:CDS
AGATTGATGATGGGGTTCAT+GGG 0.447812 1_1:-63562782 Msa0035390:CDS
GAAGATCAATGCGTAGAAAC+CGG 0.449117 1_1:+63568587 None:intergenic
AGAAAGTGAAATGCTCGAAA+TGG 0.450204 1_1:-63562301 Msa0035390:CDS
ATTATGAACTCCAGGAAAGA+AGG 0.452120 1_1:+63560223 None:intergenic
TGGTTCTGCTCAAGATGTAC+AGG 0.455510 1_1:-63562975 Msa0035390:CDS
GGGATGGACTTGATCGCTTG+AGG 0.457281 1_1:-63568401 Msa0035390:CDS
AAAGAAAACCCACCTTGAAA+TGG 0.457940 1_1:+63565925 None:intergenic
CTTTGTGGCAATTCAACTGA+TGG 0.462868 1_1:-63563497 Msa0035390:CDS
AATGCGTAGAAACCGGACTT+AGG 0.463947 1_1:+63568594 None:intergenic
TCACGTTTGGGACTTCCTCA+TGG 0.464108 1_1:-63563067 Msa0035390:CDS
CATCTTGAGCAGAACCATAT+AGG 0.464641 1_1:+63562981 None:intergenic
CAGTAACCAACATCAATGAT+TGG 0.465812 1_1:+63566553 None:intergenic
CAATGACAGGAGAGGTGCAC+TGG 0.465921 1_1:-63559685 Msa0035390:CDS
CCGCCGGTGTCGTCGATCTC+CGG 0.467368 1_1:+63568780 None:intergenic
CACCATGGATCTTTATATCG+TGG 0.468463 1_1:-63561941 Msa0035390:CDS
CAACAGCATATTCCCAAGAT+AGG 0.472691 1_1:+63563597 None:intergenic
TGAAATGCTCGAAATGGAAC+AGG 0.473977 1_1:-63562295 Msa0035390:intron
GGAACTTCTTATCAATGTAT+GGG 0.475386 1_1:-63559900 Msa0035390:CDS
CTATACGAAAGGATGAAGTA+TGG 0.477104 1_1:-63559587 Msa0035390:CDS
CTTCTATGATGACCTATCTT+GGG 0.478376 1_1:-63563609 Msa0035390:CDS
GGAAAATCAGGTGCAATGAC+AGG 0.478821 1_1:+63562911 None:intergenic
ATATTTGTGCAGCCTTATGC+AGG 0.481921 1_1:-63564091 Msa0035390:intron
TTTCAGTCATGGCGTGCTGC+TGG 0.482849 1_1:-63561200 Msa0035390:CDS
AACCACCATCTTCAGGCATA+GGG 0.483567 1_1:+63560281 None:intergenic
GTTAGGCTCTTCAGAGATTG+AGG 0.484614 1_1:-63560018 Msa0035390:intron
GAAGCCAATGAGCGGGATGA+AGG 0.489768 1_1:-63562037 Msa0035390:CDS
ATTCAGAATCTACAGAAGTT+GGG 0.490846 1_1:-63566528 Msa0035390:CDS
ATGCGTAGAAACCGGACTTA+GGG 0.491468 1_1:+63568595 None:intergenic
GGCAGCATCTTATTTCTCAC+TGG 0.491641 1_1:-63563984 Msa0035390:CDS
ATCGCTTGAGGGTTCAGCCT+AGG 0.492542 1_1:-63568389 Msa0035390:CDS
TTGAGGGTTCAGCCTAGGAT+TGG 0.494966 1_1:-63568384 Msa0035390:CDS
ATGAAAGGGAGAGGGAAGAA+AGG 0.496631 1_1:-63559652 Msa0035390:CDS
CAACTCTCAGATTGATGATG+GGG 0.497099 1_1:-63562790 Msa0035390:intron
GGACGCTTGGACCTGGACGG+GGG 0.497531 1_1:-63560750 Msa0035390:CDS
ACCATGGATCTTTATATCGT+GGG 0.498350 1_1:-63561940 Msa0035390:CDS
AGCTCAAGAGTACACTGATT+AGG 0.498610 1_1:+63559004 None:intergenic
GAAGGGGAGCTTGAGAGAAC+AGG 0.499275 1_1:-63562019 Msa0035390:CDS
CTGGATCGCCAGTAGATGTA+TGG 0.503333 1_1:-63563733 Msa0035390:CDS
GTGTGCATTTATGAGATATA+CGG 0.503947 1_1:-63561989 Msa0035390:CDS
AAGTGGTTGTGGCCAATGAC+AGG 0.505385 1_1:-63559698 Msa0035390:CDS
CTCTGAGCTGATCCTTGGTG+TGG 0.506026 1_1:+63563687 None:intergenic
TTGGTCAGCACTGCACAGTT+GGG 0.506081 1_1:-63560257 Msa0035390:CDS
AAGTTCTCTGAGCTGATCCT+TGG 0.506581 1_1:+63563682 None:intergenic
GAATGCGACGTCGGTGCCGC+CGG 0.507131 1_1:+63568764 None:intergenic
CATACTTTGACCAATCAATC+TGG 0.510561 1_1:+63566175 None:intergenic
AAGCAAAAGAAGCCATTTCA+AGG 0.510643 1_1:-63565937 Msa0035390:intron
TTATCATAGTTCACGAAAGA+TGG 0.512480 1_1:-63559876 Msa0035390:CDS
CAGATGATGGTGACGATCCA+AGG 0.515001 1_1:-63559724 Msa0035390:CDS
TCTTAAATGGAGGGAACTGC+AGG 0.515005 1_1:-63560680 Msa0035390:intron
TATGAGATATACGGTGGTGC+TGG 0.516158 1_1:-63561980 Msa0035390:CDS
CAGGAGAGGTGCACTGGCAA+GGG 0.517111 1_1:-63559679 Msa0035390:CDS
TTCGCAGAGGTTTCTTTCTG+GGG 0.517912 1_1:-63568421 Msa0035390:CDS
GTACGCTTAAGTTTGTTCCT+GGG 0.522119 1_1:-63568449 Msa0035390:CDS
ATTCACAGGAGGCCTTGGAT+TGG 0.522288 1_1:-63561224 Msa0035390:CDS
TCAACTCTCAGATTGATGAT+GGG 0.522587 1_1:-63562791 Msa0035390:intron
CTCAAATCCAACAAGTAGCA+TGG 0.522634 1_1:-63562545 Msa0035390:CDS
GCTGTTGCAATGAATTCCAT+AGG 0.524948 1_1:-63563581 Msa0035390:CDS
GATCAGCTCAGAGAACTTAG+TGG 0.527872 1_1:-63563677 Msa0035390:CDS
ACGAACTGACCAAATTGGAC+TGG 0.531570 1_1:-63562353 Msa0035390:CDS
TGGCTAGGGTTTCGTTTGAA+AGG 0.532034 1_1:+63568720 None:intergenic
CATTGTCAGTGGAAGCTGAA+AGG 0.532332 1_1:-63560827 Msa0035390:CDS
TCTGAGCTGATCCTTGGTGT+GGG 0.532801 1_1:+63563688 None:intergenic
CTAGCTGAAGCTGCAGATGA+TGG 0.533365 1_1:-63559737 Msa0035390:CDS
AAGCCAATGAGCGGGATGAA+GGG 0.534010 1_1:-63562036 Msa0035390:CDS
ACAGGAGAGGTGCACTGGCA+AGG 0.534296 1_1:-63559680 Msa0035390:CDS
TCAAATCCAACAAGTAGCAT+GGG 0.535810 1_1:-63562544 Msa0035390:CDS
GAACATCTGTTCCATTCTCA+AGG 0.538370 1_1:+63562385 None:intergenic
TCTGCAGACCATACATCTAC+TGG 0.538733 1_1:+63563725 None:intergenic
TTATGAACTCCAGGAAAGAA+GGG 0.540184 1_1:+63560224 None:intergenic
TGGGAACGCTCGCTCCATAT+GGG 0.540631 1_1:-63566244 Msa0035390:CDS
ATGAGATATATCGTAATGCT+AGG 0.540884 1_1:-63562081 Msa0035390:CDS
AACCTCTGCGAAACTTTCCC+AGG 0.541214 1_1:+63568432 None:intergenic
TCTAGCGAATTGGAGAAGCT+TGG 0.541577 1_1:-63559466 Msa0035390:three_prime_UTR
TGGAGTTCATAATGTTCTCT+CGG 0.542648 1_1:-63560213 Msa0035390:intron
TCTTGAATAATCCATATCAA+TGG 0.542952 1_1:+63564051 None:intergenic
AGTCATGGCGTGCTGCTGGT+AGG 0.543905 1_1:-63561196 Msa0035390:CDS
GATTGATGATGGGGTTCATG+GGG 0.544928 1_1:-63562781 Msa0035390:CDS
GGAGTCTAACATTGCCACAT+TGG 0.550168 1_1:-63559445 Msa0035390:three_prime_UTR
CTGGCAAGGGATTTATGAAA+GGG 0.550492 1_1:-63559666 Msa0035390:CDS
TAACCACCATCTTCAGGCAT+AGG 0.551350 1_1:+63560280 None:intergenic
TCCAACAAGTAGCATGGGGA+TGG 0.554486 1_1:-63562539 Msa0035390:CDS
ATCCAAGGGATAAGTGGTTG+TGG 0.554902 1_1:-63559709 Msa0035390:CDS
AACTCTTCCGTTGTTCCACT+AGG 0.554966 1_1:+63559813 None:intergenic
TTATATAGCGAGCTTGACAC+TGG 0.555874 1_1:-63563773 Msa0035390:CDS
GGAGCACGAACACCAATCCT+AGG 0.556937 1_1:+63568372 None:intergenic
ACACTGTTACTGTCGAATGT+TGG 0.558256 1_1:-63559921 Msa0035390:CDS
AGATCCCCAATCATTGATGT+TGG 0.563516 1_1:-63566559 Msa0035390:CDS
GAAGTTTGAAGCCAATGAGC+GGG 0.566314 1_1:-63562044 Msa0035390:CDS
GAGAGGTTGGAGAAAGATGT+TGG 0.566734 1_1:-63562112 Msa0035390:CDS
TCTGATGATGTGGATGCTGT+TGG 0.568161 1_1:-63561335 Msa0035390:CDS
ATGTGTGATATCTTAAATGG+AGG 0.570660 1_1:-63560690 Msa0035390:CDS
GGTTACAAGCAGAAATCACT+TGG 0.571014 1_1:-63559566 Msa0035390:CDS
GAGAGAACATTATGAACTCC+AGG 0.572529 1_1:+63560215 None:intergenic
GTGACGATCCAAGGGATAAG+TGG 0.574223 1_1:-63559715 Msa0035390:CDS
GTTTGCAATTGCAAATAGAG+TGG 0.574510 1_1:-63561252 Msa0035390:CDS
TTAAGCAGCATGGAAGATGC+AGG 0.578831 1_1:-63559271 Msa0035390:three_prime_UTR
CAATGCATGAGAATGCTAGA+GGG 0.579684 1_1:-63560791 Msa0035390:CDS
AGCCAATGAGCGGGATGAAG+GGG 0.581259 1_1:-63562035 Msa0035390:CDS
GTTCTGTACTGAAAGGAGAA+AGG 0.581467 1_1:+63566205 None:intergenic
CTCTGCTGACAAAATATGCA+AGG 0.582509 1_1:-63563556 Msa0035390:CDS
AAGGGATTTATGAAAGGGAG+AGG 0.582723 1_1:-63559661 Msa0035390:CDS
CTGCATAACCATTGAAGCAA+AGG 0.583356 1_1:+63568545 None:intergenic
ATATGGGAAAACATAGGTGG+TGG 0.583357 1_1:-63566228 Msa0035390:CDS
CGAACTGACCAAATTGGACT+GGG 0.584593 1_1:-63562352 Msa0035390:CDS
ATGGCGTGCTGCTGGTAGGA+AGG 0.585189 1_1:-63561192 Msa0035390:intron
ACTGGCAAGGGATTTATGAA+AGG 0.585316 1_1:-63559667 Msa0035390:CDS
CTGTTGCAATGAATTCCATA+GGG 0.585766 1_1:-63563580 Msa0035390:CDS
AAGACAAAGCTCTGATGATG+TGG 0.586420 1_1:-63561345 Msa0035390:CDS
GTCGCATTCTCTTCGATCCG+TGG 0.586449 1_1:-63568750 Msa0035390:CDS
TGGATTTGAGAAACAGGACC+AGG 0.586822 1_1:+63562558 None:intergenic
TTCTGTTATAGGTTGAAGAG+AGG 0.586977 1_1:-63562129 Msa0035390:intron
TCATGGTCAATTAAGCAGCA+TGG 0.588547 1_1:-63559281 Msa0035390:three_prime_UTR
CCACCATCTTCAGGCATAGG+GGG 0.589629 1_1:+63560283 None:intergenic
TGTGTGATATCTTAAATGGA+GGG 0.590470 1_1:-63560689 Msa0035390:CDS
CAGTTTACAAACAAATGGGT+TGG 0.594144 1_1:-63564005 Msa0035390:CDS
CAAAAGAGAAACTATACGAA+AGG 0.597322 1_1:-63559598 Msa0035390:CDS
CAATGCCGTTGAGAAAGAGT+TGG 0.597495 1_1:-63562433 Msa0035390:CDS
CATCAGTTGAATTGCCACAA+AGG 0.599059 1_1:+63563498 None:intergenic
CGCTCCATATGGGAAAACAT+AGG 0.603648 1_1:-63566234 Msa0035390:CDS
CCGGAGATCGACGACACCGG+CGG 0.605112 1_1:-63568780 Msa0035390:CDS
AGGGATTTATGAAAGGGAGA+GGG 0.607458 1_1:-63559660 Msa0035390:CDS
TTTGGAAGAGCAGCACCTAG+TGG 0.609067 1_1:-63559828 Msa0035390:CDS
AACTCCAGGAAAGAAGGGGT+TGG 0.609993 1_1:+63560229 None:intergenic
ATAGAGTGGATAGTATTCAC+AGG 0.610118 1_1:-63561238 Msa0035390:CDS
TATACGGTGGTGCTGGAGTG+TGG 0.610769 1_1:-63561973 Msa0035390:CDS
GAAAATCAGGTGCAATGACA+GGG 0.611369 1_1:+63562912 None:intergenic
ACCCACGATATAAAGATCCA+TGG 0.615945 1_1:+63561939 None:intergenic
ATCTGGAAAGACAATGACAC+TGG 0.616253 1_1:+63563942 None:intergenic
GACAGAGGAATGAGCGTGGT+AGG 0.617005 1_1:-63568500 Msa0035390:CDS
ACAATGCATGAGAATGCTAG+AGG 0.621508 1_1:-63560792 Msa0035390:CDS
CCAGGTAGTAAAGAATCTGA+AGG 0.624440 1_1:+63562576 None:intergenic
CATGACTGAAACCCAATCCA+AGG 0.629136 1_1:+63561212 None:intergenic
ATACATCTACTGGCGATCCA+GGG 0.632974 1_1:+63563735 None:intergenic
TAATATGTGTCATTCAGAAG+AGG 0.633222 1_1:+63561305 None:intergenic
ATTGCTCTGATTAATAATGG+AGG 0.634229 1_1:+63562947 None:intergenic
GGAACGAGGTAATTGACGAT+CGG 0.636304 1_1:+63568674 None:intergenic
TGAAGTTTGAAGCCAATGAG+CGG 0.637238 1_1:-63562045 Msa0035390:CDS
AGATGATGGTGACGATCCAA+GGG 0.637311 1_1:-63559723 Msa0035390:CDS
TTCCTGGGAAAGTTTCGCAG+AGG 0.638742 1_1:-63568434 Msa0035390:CDS
CAACCGGAGATCGACGACAC+CGG 0.639195 1_1:-63568783 Msa0035390:CDS
ACCACCATCTTCAGGCATAG+GGG 0.639960 1_1:+63560282 None:intergenic
AGCAGCACCTAGTGGAACAA+CGG 0.641085 1_1:-63559820 Msa0035390:CDS
CCTTGCTGTTCTGTACTGAA+AGG 0.642489 1_1:+63566198 None:intergenic
CTCTATGATATGTGCCAATG+TGG 0.645168 1_1:+63559431 None:intergenic
TTTCTCAACGGCATTGACAA+CGG 0.647436 1_1:+63562440 None:intergenic
AAGCTTGAGACAGAGAGCAA+AGG 0.650567 1_1:-63559348 Msa0035390:three_prime_UTR
GTCGATCTCCGGTTGCGACG+AGG 0.651183 1_1:+63568791 None:intergenic
ACGAGGTAATTGACGATCGG+AGG 0.652639 1_1:+63568677 None:intergenic
GACATTCTCTGTGAAATGGG+AGG 0.652873 1_1:-63561278 Msa0035390:CDS
GTTTGAAAGGAAATCGACCA+CGG 0.655371 1_1:+63568733 None:intergenic
ACTAGCCAACTCTTTCTCAA+CGG 0.659026 1_1:+63562428 None:intergenic
GGTTCTGCTCAAGATGTACA+GGG 0.659369 1_1:-63562974 Msa0035390:CDS
AAAGCAGGTAGCATTGTCAG+TGG 0.660390 1_1:-63560838 Msa0035390:intron
CGTGGTAGGAATCTTCGTGA+AGG 0.661708 1_1:-63568486 Msa0035390:CDS
GTTATGGAGATGAGATCGAG+TGG 0.661739 1_1:+63568650 None:intergenic
GTAACCAACATCAATGATTG+GGG 0.662757 1_1:+63566555 None:intergenic
AAACTGGAAGACGATTTGAA+AGG 0.663918 1_1:+63564022 None:intergenic
ACAACGGAAGAGTTTCATGT+GGG 0.671314 1_1:-63559804 Msa0035390:CDS
GATCTCCGGTTGCGACGAGG+AGG 0.671426 1_1:+63568794 None:intergenic
GGGGCAATGAATACATCTGG+CGG 0.672975 1_1:+63560323 None:intergenic
TCCATATGGGAAAACATAGG+TGG 0.673844 1_1:-63566231 Msa0035390:CDS
AATGCATGAGAATGCTAGAG+GGG 0.674087 1_1:-63560790 Msa0035390:CDS
TATGAACTCCAGGAAAGAAG+GGG 0.677681 1_1:+63560225 None:intergenic
ATGGAGATGAGATCGAGTGG+AGG 0.678927 1_1:+63568653 None:intergenic
CAAATCCAACAAGTAGCATG+GGG 0.680874 1_1:-63562543 Msa0035390:CDS
AACAACGGAAGAGTTTCATG+TGG 0.684804 1_1:-63559805 Msa0035390:CDS
GAAAACAAACTTGAATGACT+CGG 0.686009 1_1:+63563520 None:intergenic
TGAGATCGAGTGGAGGAACG+AGG 0.689002 1_1:+63568660 None:intergenic
CCTTTCAGTACAGAACAGCA+AGG 0.690633 1_1:-63566198 Msa0035390:CDS
CCATTTCACAGAGAATGTCA+CGG 0.695009 1_1:+63561282 None:intergenic
GAGTGGATAGTATTCACAGG+AGG 0.697615 1_1:-63561235 Msa0035390:CDS
GATCGAAGAGAATGCGACGT+CGG 0.699359 1_1:+63568755 None:intergenic
TGCTGACAAAATATGCAAGG+AGG 0.699470 1_1:-63563553 Msa0035390:CDS
TATATCTCATAAATGCACAC+AGG 0.699482 1_1:+63561992 None:intergenic
CTATAGTAAGACCCACACCA+AGG 0.740191 1_1:-63563699 Msa0035390:CDS
TGCATTTATGAGATATACGG+TGG 0.741562 1_1:-63561986 Msa0035390:CDS
TAATGTCTTATAGAACCATG+AGG 0.741657 1_1:+63563052 None:intergenic
TTTCGACAGAGGAATGAGCG+TGG 0.759909 1_1:-63568504 Msa0035390:CDS
GTTGTGGCCAATGACAGGAG+AGG 0.775360 1_1:-63559693 Msa0035390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTGAGTTATTAAAAA+TGG - chr1_1:63560598-63560617 Msa0035390:intron 10.0%
!!! TATTTTAAAAGAAAGTTAAT+GGG - chr1_1:63561045-63561064 Msa0035390:intron 10.0%
!!! TTATTTTTTATGTTTTATGT+TGG - chr1_1:63561643-63561662 Msa0035390:intron 10.0%
!!! TATTTTTTATGTTTTATGTT+GGG - chr1_1:63561644-63561663 Msa0035390:intron 10.0%
!!! TTTTGAAAGATTATATAATT+AGG - chr1_1:63563557-63563576 Msa0035390:CDS 10.0%
!!! ATGATATTTTACTATTATTA+TGG + chr1_1:63566392-63566411 None:intergenic 10.0%
!! AATAACTTAGAAATATAATA+TGG + chr1_1:63566807-63566826 None:intergenic 10.0%
!! ATTAATTAATTAATCAATGT+TGG - chr1_1:63567596-63567615 Msa0035390:intron 10.0%
!!! TAAAAAAAGAATGGATTTAA+TGG - chr1_1:63559957-63559976 Msa0035390:intron 15.0%
!!! AAAAAAAGAATGGATTTAAT+GGG - chr1_1:63559958-63559977 Msa0035390:intron 15.0%
!!! CTATTTTAAAAGAAAGTTAA+TGG - chr1_1:63561044-63561063 Msa0035390:intron 15.0%
!!! AATAAAGTAAACATTTTGTA+AGG - chr1_1:63561464-63561483 Msa0035390:intron 15.0%
!!! ATTTTTTATGTTTTATGTTG+GGG - chr1_1:63561645-63561664 Msa0035390:intron 15.0%
!! GCTAATTAAAATTAGATTTA+TGG + chr1_1:63562531-63562550 None:intergenic 15.0%
!! TTATCAAAATCTGATAATAA+CGG + chr1_1:63564406-63564425 None:intergenic 15.0%
!! AGAAACATAAAACTTAAATA+TGG - chr1_1:63564557-63564576 Msa0035390:intron 15.0%
!! AAATCGATGAAATAAATAAA+GGG + chr1_1:63565579-63565598 None:intergenic 15.0%
!! NNNNNATGACCTTATAATTA+GGG + chr1_1:63566116-63566135 None:intergenic 15.0%
!! NNNNNNATGACCTTATAATT+AGG + chr1_1:63566117-63566136 None:intergenic 15.0%
!!! CAAAATGTTACTTATAAAAA+GGG - chr1_1:63566242-63566261 Msa0035390:CDS 15.0%
!! TAATAGTAAAATATCATTTG+TGG - chr1_1:63566395-63566414 Msa0035390:intron 15.0%
!! ATCAAAGTAAATATATCATA+AGG + chr1_1:63566618-63566637 None:intergenic 15.0%
!!! TTTTTCATTGTTAAAAAGTA+TGG - chr1_1:63568012-63568031 Msa0035390:intron 15.0%
!! TGGTATATGATATAACATTA+TGG - chr1_1:63559766-63559785 Msa0035390:CDS 20.0%
!! GATGTTTATTTCATAAAAAG+TGG - chr1_1:63559906-63559925 Msa0035390:CDS 20.0%
!!! TATTTTAAAAGTATGTTGCA+TGG + chr1_1:63560413-63560432 None:intergenic 20.0%
!! ATGGATAATTATGAAAAGAA+TGG - chr1_1:63560617-63560636 Msa0035390:intron 20.0%
!! GTTTGTATAGAAAGTTAAAT+TGG + chr1_1:63561025-63561044 None:intergenic 20.0%
!!! TTTTTTATGTTTTATGTTGG+GGG - chr1_1:63561646-63561665 Msa0035390:intron 20.0%
!!! TCTTAACATGTTTTTTCTTA+TGG - chr1_1:63561705-63561724 Msa0035390:intron 20.0%
!!! TTTCTTGTTTTAACTTGTTA+TGG - chr1_1:63561748-63561767 Msa0035390:intron 20.0%
!!! CAAATCTTCTAATTTTCATT+CGG + chr1_1:63562635-63562654 None:intergenic 20.0%
!!! TCATTCTTTTGCATATAATT+AGG + chr1_1:63562775-63562794 None:intergenic 20.0%
!! AAAAAAAACCTAACTCTTAA+TGG + chr1_1:63562818-63562837 None:intergenic 20.0%
!! TTGTTACAAGTTAAAATTCT+TGG - chr1_1:63562854-63562873 Msa0035390:intron 20.0%
!! TATGTTAGGATATAGAATAA+AGG - chr1_1:63562945-63562964 Msa0035390:CDS 20.0%
!! ATGTTAGGATATAGAATAAA+GGG - chr1_1:63562946-63562965 Msa0035390:CDS 20.0%
!!! TGATATTTCTGTTGTTTTTT+CGG - chr1_1:63563046-63563065 Msa0035390:CDS 20.0%
!!! ATGCTTTATTTAACTTTGAA+AGG - chr1_1:63563494-63563513 Msa0035390:CDS 20.0%
!! CATTATTAGTATTAGGAATT+AGG - chr1_1:63563908-63563927 Msa0035390:intron 20.0%
!!! ACTTACATATTTTCTTAACA+CGG + chr1_1:63564894-63564913 None:intergenic 20.0%
!! AATCGATGAAATAAATAAAG+GGG + chr1_1:63565578-63565597 None:intergenic 20.0%
!! CAAATCGATGAAATAAATAA+AGG + chr1_1:63565580-63565599 None:intergenic 20.0%
!!! CTTTATTTATTTCATCGATT+TGG - chr1_1:63565578-63565597 Msa0035390:intron 20.0%
!! NNNNATGACCTTATAATTAG+GGG + chr1_1:63566115-63566134 None:intergenic 20.0%
!!! GCAAAATGTTACTTATAAAA+AGG - chr1_1:63566241-63566260 Msa0035390:CDS 20.0%
!! TAGAGAAAAAAATATCTGAA+AGG + chr1_1:63566284-63566303 None:intergenic 20.0%
!! AAACTTAAATTCAAACAATG+TGG + chr1_1:63566325-63566344 None:intergenic 20.0%
!! TCTCTATATTAGATAATGTT+TGG - chr1_1:63567325-63567344 Msa0035390:intron 20.0%
!! GTATATATAAATCCTAATAC+TGG - chr1_1:63567926-63567945 Msa0035390:intron 20.0%
! TAGGATTAGAAATTACAAGT+TGG - chr1_1:63559569-63559588 Msa0035390:CDS 25.0%
! AGGATTAGAAATTACAAGTT+GGG - chr1_1:63559570-63559589 Msa0035390:CDS 25.0%
!! GTTTCACTTATAGTTTTTCT+AGG + chr1_1:63559712-63559731 None:intergenic 25.0%
!!! TTTTTTACATCTGACAAAAC+TGG + chr1_1:63559944-63559963 None:intergenic 25.0%
! TGTCAGATGTAAAAAAAGAA+TGG - chr1_1:63559948-63559967 Msa0035390:intron 25.0%
! ACTGGGAAATATATTTACTA+TGG - chr1_1:63559993-63560012 Msa0035390:intron 25.0%
! AGCATAACCCATAATTTAAT+TGG - chr1_1:63560217-63560236 Msa0035390:CDS 25.0%
! TCATTGGCCAATTAAATTAT+GGG + chr1_1:63560227-63560246 None:intergenic 25.0%
! TGCAAATTATTTATGCTCAT+TGG + chr1_1:63560243-63560262 None:intergenic 25.0%
!! TAAATTTTCCCGTTCAATTA+AGG - chr1_1:63560278-63560297 Msa0035390:CDS 25.0%
!! TAAGTGTTATAGTTGATGTT+TGG - chr1_1:63560443-63560462 Msa0035390:intron 25.0%
!!! TTGCTATTTTCTATTAACAC+TGG - chr1_1:63560651-63560670 Msa0035390:intron 25.0%
!!! GTTTGCTTTTCAAAAACATA+TGG - chr1_1:63560919-63560938 Msa0035390:intron 25.0%
! ATTTGTTTGAATGCTTTATG+TGG - chr1_1:63561111-63561130 Msa0035390:intron 25.0%
! TTTGTTTGAATGCTTTATGT+GGG - chr1_1:63561112-63561131 Msa0035390:intron 25.0%
!! TGTTTTGTATGTCAGATTTT+AGG - chr1_1:63561186-63561205 Msa0035390:intron 25.0%
!! GTTTTGTATGTCAGATTTTA+GGG - chr1_1:63561187-63561206 Msa0035390:intron 25.0%
!!! GATTCAAGTACACTTATTTT+AGG + chr1_1:63561379-63561398 None:intergenic 25.0%
! AGACATTAAAAATGACACAA+GGG + chr1_1:63561688-63561707 None:intergenic 25.0%
! AAGACATTAAAAATGACACA+AGG + chr1_1:63561689-63561708 None:intergenic 25.0%
!!! AAATTTGTTGTATGAACTGT+AGG - chr1_1:63562160-63562179 Msa0035390:intron 25.0%
! TCGACATAAAAACATATTCA+CGG + chr1_1:63562231-63562250 None:intergenic 25.0%
!!! TGAATATGTTTTTATGTCGA+TGG - chr1_1:63562231-63562250 Msa0035390:intron 25.0%
!!! GAATATGTTTTTATGTCGAT+GGG - chr1_1:63562232-63562251 Msa0035390:intron 25.0%
!! TTTGAAATGCTTGATCAATA+GGG - chr1_1:63562273-63562292 Msa0035390:intron 25.0%
!! AAATTTTCTGTTTCCAAAGA+AGG + chr1_1:63562343-63562362 None:intergenic 25.0%
! TTGGAAACAGAAAATTTGAT+AGG - chr1_1:63562346-63562365 Msa0035390:CDS 25.0%
! TAAGTTAGTTAGAATTGAAC+AGG + chr1_1:63562585-63562604 None:intergenic 25.0%
! ACTAACTTATTACTGACATT+TGG - chr1_1:63562596-63562615 Msa0035390:CDS 25.0%
! CTAACTTATTACTGACATTT+GGG - chr1_1:63562597-63562616 Msa0035390:CDS 25.0%
! TAACTTATTACTGACATTTG+GGG - chr1_1:63562598-63562617 Msa0035390:CDS 25.0%
! CAAAACATTTCACGTAAAAA+TGG + chr1_1:63562700-63562719 None:intergenic 25.0%
! TGTTAGGATATAGAATAAAG+GGG - chr1_1:63562947-63562966 Msa0035390:CDS 25.0%
!!! AAGTTAGTTAGTTTGTTATG+CGG - chr1_1:63563005-63563024 Msa0035390:CDS 25.0%
! ATTCTTTCTTACTCAAAGAA+AGG - chr1_1:63563268-63563287 Msa0035390:intron 25.0%
! TTCTTTCTTACTCAAAGAAA+GGG - chr1_1:63563269-63563288 Msa0035390:intron 25.0%
! TCTTGAATAATCCATATCAA+TGG + chr1_1:63563732-63563751 None:intergenic 25.0%
! ACTTGGACATTATTAGTATT+AGG - chr1_1:63563901-63563920 Msa0035390:intron 25.0%
!! TGGATTTGGTAAAAATGATA+TGG - chr1_1:63564123-63564142 Msa0035390:intron 25.0%
! ATTTGGTAAAAATGATATGG+TGG - chr1_1:63564126-63564145 Msa0035390:intron 25.0%
! TGCTATCAAAAGATAACATT+AGG - chr1_1:63564377-63564396 Msa0035390:intron 25.0%
!! TCAATTATTTCTTGGAGATA+GGG + chr1_1:63564439-63564458 None:intergenic 25.0%
!! TCTTGTACTCAATTATTTCT+TGG + chr1_1:63564447-63564466 None:intergenic 25.0%
! AAGAAGAATTTCTCATTACA+TGG - chr1_1:63564463-63564482 Msa0035390:intron 25.0%
! AGAAGAATTTCTCATTACAT+GGG - chr1_1:63564464-63564483 Msa0035390:intron 25.0%
! ATTCAAATACAACATACTGA+AGG + chr1_1:63564654-63564673 None:intergenic 25.0%
!! CTTACATATTTTCTTAACAC+GGG + chr1_1:63564893-63564912 None:intergenic 25.0%
!!! TATCTAGTTCTATTTCATTC+TGG + chr1_1:63565275-63565294 None:intergenic 25.0%
!!! AGATATTGACTTGCTAAAAA+TGG - chr1_1:63565290-63565309 Msa0035390:intron 25.0%
!! ATGGATGATGATTTTTCTAA+TGG - chr1_1:63565309-63565328 Msa0035390:intron 25.0%
! AATATTGAAATTGCTGCAAT+TGG - chr1_1:63565516-63565535 Msa0035390:intron 25.0%
! AAATAAAGGGGTAGTAAAAA+GGG + chr1_1:63565566-63565585 None:intergenic 25.0%
! TAAATAAAGGGGTAGTAAAA+AGG + chr1_1:63565567-63565586 None:intergenic 25.0%
! GAATCATTTCTTTCTGTTAT+AGG - chr1_1:63565640-63565659 Msa0035390:intron 25.0%
!! ATGTTACTTATAAAAAGGGA+CGG - chr1_1:63566246-63566265 Msa0035390:CDS 25.0%
!!! ATTTTTTTCTCTATTTCCCT+TGG - chr1_1:63566291-63566310 Msa0035390:intron 25.0%
!!! TTTTTTTCTCTATTTCCCTT+GGG - chr1_1:63566292-63566311 Msa0035390:intron 25.0%
!! GTTTTTATGTTAAACCATGT+AGG - chr1_1:63566656-63566675 Msa0035390:intron 25.0%
!!! TTTAAATTCTGAAACCTACA+TGG + chr1_1:63566673-63566692 None:intergenic 25.0%
! GAAAACTAATCTAAATCTGA+AGG + chr1_1:63566722-63566741 None:intergenic 25.0%
! TTTGATTAAGGAATCAAAAG+AGG + chr1_1:63566758-63566777 None:intergenic 25.0%
!!! TTGCTTGATTTGAATCATTT+TGG - chr1_1:63566918-63566937 Msa0035390:intron 25.0%
!! AGGGGATGTAATATATTTTT+GGG - chr1_1:63567008-63567027 Msa0035390:intron 25.0%
! TCAATGTGTGATATCTTAAA+TGG - chr1_1:63567087-63567106 Msa0035390:intron 25.0%
! GAATAGAATAGAATGTATCA+GGG + chr1_1:63567212-63567231 None:intergenic 25.0%
! AGAATAGAATAGAATGTATC+AGG + chr1_1:63567213-63567232 None:intergenic 25.0%
! AAAAACATTCCTAATGCAAT+AGG + chr1_1:63567426-63567445 None:intergenic 25.0%
!! CATTCAATTGATAACATTGT+GGG + chr1_1:63567679-63567698 None:intergenic 25.0%
! CTTGAGGTTTCATAATTTAT+TGG - chr1_1:63567803-63567822 Msa0035390:intron 25.0%
!! AGAAAGGTACAGAATAAAAA+TGG - chr1_1:63568144-63568163 Msa0035390:intron 25.0%
!! GAAAAATGGTCTTGAAATTA+GGG + chr1_1:63568481-63568500 None:intergenic 25.0%
!! TGAAAAATGGTCTTGAAATT+AGG + chr1_1:63568482-63568501 None:intergenic 25.0%
!!! AATTTCAAGACCATTTTTCA+TGG - chr1_1:63568482-63568501 Msa0035390:CDS 25.0%
!!! ATTTTGAGTAGAATAATAGC+TGG - chr1_1:63568646-63568665 Msa0035390:CDS 25.0%
GGATTAGAAATTACAAGTTG+GGG - chr1_1:63559571-63559590 Msa0035390:CDS 30.0%
!!! ACCTATAGTAGAAAGCATTT+TGG - chr1_1:63559598-63559617 Msa0035390:CDS 30.0%
TCCAAAATGCTTTCTACTAT+AGG + chr1_1:63559602-63559621 None:intergenic 30.0%
!! AAAGCATTTTGGAAACTACT+AGG - chr1_1:63559609-63559628 Msa0035390:CDS 30.0%
! CAATGAGTTGGATAGAAATA+TGG - chr1_1:63559746-63559765 Msa0035390:CDS 30.0%
TATTTCCCAGTAACTAACTT+TGG + chr1_1:63559984-63560003 None:intergenic 30.0%
TTAAGGAAACCAAAAGTAGT+AGG + chr1_1:63560182-63560201 None:intergenic 30.0%
! CTAACAAAGAACACTTGTTA+AGG + chr1_1:63560199-63560218 None:intergenic 30.0%
CTCATTGGCCAATTAAATTA+TGG + chr1_1:63560228-63560247 None:intergenic 30.0%
!! GAAAATTTAGTTGATAACGG+GGG + chr1_1:63560267-63560286 None:intergenic 30.0%
!! GGAAAATTTAGTTGATAACG+GGG + chr1_1:63560268-63560287 None:intergenic 30.0%
!! GGGAAAATTTAGTTGATAAC+GGG + chr1_1:63560269-63560288 None:intergenic 30.0%
!! CGGGAAAATTTAGTTGATAA+CGG + chr1_1:63560270-63560289 None:intergenic 30.0%
CTGAATATCTTGAAGAATTC+TGG - chr1_1:63560339-63560358 Msa0035390:CDS 30.0%
TTCTTATACCAACATTCACT+AGG - chr1_1:63560727-63560746 Msa0035390:CDS 30.0%
GGAAAATCATAACTTCTTTG+CGG - chr1_1:63560940-63560959 Msa0035390:intron 30.0%
AGTAACCAACATCAATGATT+GGG + chr1_1:63561229-63561248 None:intergenic 30.0%
AATTCAGAATCTACAGAAGT+TGG - chr1_1:63561251-63561270 Msa0035390:CDS 30.0%
ATTCAGAATCTACAGAAGTT+GGG - chr1_1:63561252-63561271 Msa0035390:CDS 30.0%
!! GAAGTTGGGTTATGTTTTTA+AGG - chr1_1:63561266-63561285 Msa0035390:CDS 30.0%
!! TTTTAGGAGAGTTGAATCTA+AGG + chr1_1:63561363-63561382 None:intergenic 30.0%
!! AGCTTGTTAAAATATTCGTC+TGG - chr1_1:63561435-63561454 Msa0035390:intron 30.0%
ATTAAAAATGACACAAGGGA+AGG + chr1_1:63561684-63561703 None:intergenic 30.0%
! TCTTATGGTAAATCTGCTTT+TGG - chr1_1:63561720-63561739 Msa0035390:intron 30.0%
AATGATACCTTCAAAACTAC+GGG + chr1_1:63561810-63561829 None:intergenic 30.0%
CAATGATACCTTCAAAACTA+CGG + chr1_1:63561811-63561830 None:intergenic 30.0%
!!! AAGCAGTGTTGCTATTTTTT+GGG - chr1_1:63561974-63561993 Msa0035390:CDS 30.0%
! GTTTGAAATGCTTGATCAAT+AGG - chr1_1:63562272-63562291 Msa0035390:intron 30.0%
!! GGGATGTATTTTGTTTGAAA+TGG - chr1_1:63562293-63562312 Msa0035390:intron 30.0%
CAATGTTTGTTTACCTTCTT+TGG - chr1_1:63562327-63562346 Msa0035390:CDS 30.0%
TGATAGGAGTGAAATAAAAC+TGG - chr1_1:63562362-63562381 Msa0035390:CDS 30.0%
ACTGGACAAGTAATAGTAAT+AGG - chr1_1:63562380-63562399 Msa0035390:CDS 30.0%
ATACCTGAGAATTACAAAGA+GGG + chr1_1:63562485-63562504 None:intergenic 30.0%
AATACCTGAGAATTACAAAG+AGG + chr1_1:63562486-63562505 None:intergenic 30.0%
ATTTATGGAAAGAGAAAACC+AGG + chr1_1:63562516-63562535 None:intergenic 30.0%
TAAAAATGGTCAGAGAGAAA+CGG + chr1_1:63562686-63562705 None:intergenic 30.0%
ACAAGTTAAAATTCTTGGAG+AGG - chr1_1:63562859-63562878 Msa0035390:intron 30.0%
!! GAGTAATTGAGTTTTATGAC+TGG - chr1_1:63563124-63563143 Msa0035390:intron 30.0%
ACAGCAAAATTCAAACAATC+AGG + chr1_1:63563330-63563349 None:intergenic 30.0%
GAGAAATGAATTAGAAATGC+AGG - chr1_1:63563430-63563449 Msa0035390:intron 30.0%
! AGAAATGCAGGATATTTTGT+TGG - chr1_1:63563442-63563461 Msa0035390:intron 30.0%
TGGTGGTTTAGGTATTAAAA+AGG - chr1_1:63563462-63563481 Msa0035390:intron 30.0%
TCAAAATCAGAGTTAAAGCA+GGG + chr1_1:63563543-63563562 None:intergenic 30.0%
TTCAAAATCAGAGTTAAAGC+AGG + chr1_1:63563544-63563563 None:intergenic 30.0%
! ATCAATGGTACTGAACAAAA+AGG + chr1_1:63563717-63563736 None:intergenic 30.0%
TTTGTTCAGTACCATTGATA+TGG - chr1_1:63563718-63563737 Msa0035390:CDS 30.0%
TCTTCCAGTTTACAAACAAA+TGG - chr1_1:63563770-63563789 Msa0035390:CDS 30.0%
CTTCCAGTTTACAAACAAAT+GGG - chr1_1:63563771-63563790 Msa0035390:CDS 30.0%
! CTTTCCAGATTTTACTTATC+CGG - chr1_1:63563851-63563870 Msa0035390:intron 30.0%
TTTACCGGATAAGTAAAATC+TGG + chr1_1:63563858-63563877 None:intergenic 30.0%
AAACGTAACTACATCTTTAC+CGG + chr1_1:63563873-63563892 None:intergenic 30.0%
!!! ATATGGTGGTTTTAGTTGTT+GGG - chr1_1:63564140-63564159 Msa0035390:intron 30.0%
GAAAACAAACTTGAATGACT+CGG + chr1_1:63564263-63564282 None:intergenic 30.0%
!! TTCAAGTTTGTTTTCCTTTG+TGG - chr1_1:63564268-63564287 Msa0035390:intron 30.0%
! CTCAATTATTTCTTGGAGAT+AGG + chr1_1:63564440-63564459 None:intergenic 30.0%
! TAAAGACAAGTTGAACACAA+CGG + chr1_1:63564617-63564636 None:intergenic 30.0%
! TTTACTGATCCCATATCTTT+TGG - chr1_1:63564676-63564695 Msa0035390:intron 30.0%
TAATGTCTTATAGAACCATG+AGG + chr1_1:63564731-63564750 None:intergenic 30.0%
! CATGGTTCTATAAGACATTA+TGG - chr1_1:63564731-63564750 Msa0035390:intron 30.0%
ATAAGACATTATGGCTTGAA+TGG - chr1_1:63564740-63564759 Msa0035390:intron 30.0%
ATAGCTGATATTGTCCTATA+TGG - chr1_1:63564785-63564804 Msa0035390:intron 30.0%
ATTGCTCTGATTAATAATGG+AGG + chr1_1:63564836-63564855 None:intergenic 30.0%
GTCATTGCTCTGATTAATAA+TGG + chr1_1:63564839-63564858 None:intergenic 30.0%
ACTTAATGAAAATGAAGCAG+TGG + chr1_1:63564964-63564983 None:intergenic 30.0%
! TCTAAATTTGCTCAAGCTAT+TGG - chr1_1:63565093-63565112 Msa0035390:intron 30.0%
!!! CAGTTTATTTTAGAAACACC+TGG - chr1_1:63565611-63565630 Msa0035390:intron 30.0%
AAGAAATGATTCTTAGAACC+AGG + chr1_1:63565632-63565651 None:intergenic 30.0%
ATGAGATATATCGTAATGCT+AGG - chr1_1:63565699-63565718 Msa0035390:intron 30.0%
TATATCTCATAAATGCACAC+AGG + chr1_1:63565791-63565810 None:intergenic 30.0%
GTGTGCATTTATGAGATATA+CGG - chr1_1:63565791-63565810 Msa0035390:intron 30.0%
TTAGATATACTTGCAAGAAG+GGG + chr1_1:63565939-63565958 None:intergenic 30.0%
CTTAGATATACTTGCAAGAA+GGG + chr1_1:63565940-63565959 None:intergenic 30.0%
TCTTAGATATACTTGCAAGA+AGG + chr1_1:63565941-63565960 None:intergenic 30.0%
!! TGCTTTTTAAGGGATAAAAG+AGG + chr1_1:63566050-63566069 None:intergenic 30.0%
!!! GCTTTTCTCTTGCTTTTTAA+GGG + chr1_1:63566060-63566079 None:intergenic 30.0%
!!! TGCTTTTCTCTTGCTTTTTA+AGG + chr1_1:63566061-63566080 None:intergenic 30.0%
!!! TTTTTTCTCTATTTCCCTTG+GGG - chr1_1:63566293-63566312 Msa0035390:intron 30.0%
! TAATATGTGTCATTCAGAAG+AGG + chr1_1:63566478-63566497 None:intergenic 30.0%
!!! ACGCAGATTAAGTTTTGTTT+TGG - chr1_1:63566843-63566862 Msa0035390:intron 30.0%
!!! CGCAGATTAAGTTTTGTTTT+GGG - chr1_1:63566844-63566863 Msa0035390:intron 30.0%
!!! AGTTTTGTTTTGGGAAAACT+TGG - chr1_1:63566853-63566872 Msa0035390:intron 30.0%
!! TTGAATCATTTTGGAAAAGC+AGG - chr1_1:63566927-63566946 Msa0035390:intron 30.0%
! GAGGGGATGTAATATATTTT+TGG - chr1_1:63567007-63567026 Msa0035390:intron 30.0%
!! GGGGATGTAATATATTTTTG+GGG - chr1_1:63567009-63567028 Msa0035390:intron 30.0%
ATGTGTGATATCTTAAATGG+AGG - chr1_1:63567090-63567109 Msa0035390:intron 30.0%
TGTGTGATATCTTAAATGGA+GGG - chr1_1:63567091-63567110 Msa0035390:intron 30.0%
! TTAGAATGTTTGGAATCAGT+TGG - chr1_1:63567262-63567281 Msa0035390:intron 30.0%
TAATGTTTGGAAGTCCAAAA+TGG - chr1_1:63567338-63567357 Msa0035390:intron 30.0%
TTATAGTTTCATTCGCTTCA+AGG + chr1_1:63567655-63567674 None:intergenic 30.0%
! GCATTCAATTGATAACATTG+TGG + chr1_1:63567680-63567699 None:intergenic 30.0%
CAATGTTATCAATTGAATGC+AGG - chr1_1:63567680-63567699 Msa0035390:intron 30.0%
! TAACAGTGTTTTTCCTAAGT+GGG + chr1_1:63567848-63567867 None:intergenic 30.0%
TGGAACTTCTTATCAATGTA+TGG - chr1_1:63567879-63567898 Msa0035390:intron 30.0%
GGAACTTCTTATCAATGTAT+GGG - chr1_1:63567880-63567899 Msa0035390:intron 30.0%
TTATCATAGTTCACGAAAGA+TGG - chr1_1:63567904-63567923 Msa0035390:intron 30.0%
CAAAAGAGAAACTATACGAA+AGG - chr1_1:63568182-63568201 Msa0035390:intron 30.0%
GCTTAATTGACCATGAAAAA+TGG + chr1_1:63568495-63568514 None:intergenic 30.0%
GTATAGTCAGTAAACATTAG+TGG - chr1_1:63568621-63568640 Msa0035390:CDS 30.0%
AAACTCACTAGAGCAATTCT+GGG + chr1_1:63559432-63559451 None:intergenic 35.0%
AAAACTCACTAGAGCAATTC+TGG + chr1_1:63559433-63559452 None:intergenic 35.0%
TATCGATGTAGATGTTGCAT+TGG - chr1_1:63559523-63559542 Msa0035390:three_prime_UTR 35.0%
AGATCTAGAGATCAATGAGT+TGG - chr1_1:63559734-63559753 Msa0035390:CDS 35.0%
TAAGGGAAATGCTAAAGAGT+AGG - chr1_1:63560053-63560072 Msa0035390:CDS 35.0%
AAGGGAAATGCTAAAGAGTA+GGG - chr1_1:63560054-63560073 Msa0035390:CDS 35.0%
AGAAATACTGCATTGAGAAG+TGG - chr1_1:63560099-63560118 Msa0035390:intron 35.0%
CAAAAGTAGTAGGTTTGCAT+TGG + chr1_1:63560172-63560191 None:intergenic 35.0%
! CAATGCAAACCTACTACTTT+TGG - chr1_1:63560170-63560189 Msa0035390:intron 35.0%
!! TCCTCTTAGCCTTAATTGAA+CGG + chr1_1:63560290-63560309 None:intergenic 35.0%
AAAATGTCAGACAGAAGTGA+AGG - chr1_1:63560484-63560503 Msa0035390:intron 35.0%
! GAAGGTTTGCTTCAATAAAC+TGG - chr1_1:63560502-63560521 Msa0035390:intron 35.0%
TTTGTGCCATGTTTCATTAC+AGG + chr1_1:63560532-63560551 None:intergenic 35.0%
TGGAATTACATCATGACTGT+GGG + chr1_1:63560680-63560699 None:intergenic 35.0%
! ACAAAAGTGCAAAGTCTATC+TGG - chr1_1:63560702-63560721 Msa0035390:CDS 35.0%
!! TTTTTCAGTTTGAACAGCAC+AGG + chr1_1:63560765-63560784 None:intergenic 35.0%
AATACCCAAGTTCATATGCA+GGG + chr1_1:63560824-63560843 None:intergenic 35.0%
GCTTTATGTGGGATAAAGAT+CGG - chr1_1:63561123-63561142 Msa0035390:intron 35.0%
GTAACCAACATCAATGATTG+GGG + chr1_1:63561228-63561247 None:intergenic 35.0%
CAGTAACCAACATCAATGAT+TGG + chr1_1:63561230-63561249 None:intergenic 35.0%
AGACGCGGAAAAAAAAATCA+GGG + chr1_1:63561491-63561510 None:intergenic 35.0%
CATACTTTGACCAATCAATC+TGG + chr1_1:63561608-63561627 None:intergenic 35.0%
ATGATACCTTCAAAACTACG+GGG + chr1_1:63561809-63561828 None:intergenic 35.0%
! AATGGCTTCTTTTGCTTCTA+GGG + chr1_1:63561840-63561859 None:intergenic 35.0%
! AAATGGCTTCTTTTGCTTCT+AGG + chr1_1:63561841-63561860 None:intergenic 35.0%
AAGCAAAAGAAGCCATTTCA+AGG - chr1_1:63561843-63561862 Msa0035390:intron 35.0%
AAAAGAAGCCATTTCAAGGT+GGG - chr1_1:63561847-63561866 Msa0035390:intron 35.0%
AAAGAAAACCCACCTTGAAA+TGG + chr1_1:63561858-63561877 None:intergenic 35.0%
GTTGCAAAATCTTTGAGCTT+TGG - chr1_1:63561901-63561920 Msa0035390:intron 35.0%
!!! GAAGCAGTGTTGCTATTTTT+TGG - chr1_1:63561973-63561992 Msa0035390:CDS 35.0%
GGGTTTCATTGAATCATTCT+TGG + chr1_1:63562465-63562484 None:intergenic 35.0%
AAACCCTCTTTGTAATTCTC+AGG - chr1_1:63562479-63562498 Msa0035390:CDS 35.0%
! TCTTCTAATTTTCATTCGGC+AGG + chr1_1:63562631-63562650 None:intergenic 35.0%
CTTTGCTTCCATTAAGAGTT+AGG - chr1_1:63562807-63562826 Msa0035390:intron 35.0%
TTGATATGTAGACCCACATT+AGG - chr1_1:63562914-63562933 Msa0035390:CDS 35.0%
TGATATGTAGACCCACATTA+GGG - chr1_1:63562915-63562934 Msa0035390:CDS 35.0%
AAAGTACAGAAGACTCTCAA+AGG + chr1_1:63563176-63563195 None:intergenic 35.0%
CTCTTTATTCAACAGCAGTA+GGG + chr1_1:63563203-63563222 None:intergenic 35.0%
ACTCTTTATTCAACAGCAGT+AGG + chr1_1:63563204-63563223 None:intergenic 35.0%
AAAAGGTCAAGGAAACTGTT+AGG + chr1_1:63563296-63563315 None:intergenic 35.0%
TTCAGCAAAGAAAAAGGTCA+AGG + chr1_1:63563307-63563326 None:intergenic 35.0%
ATCAGGTTCAGCAAAGAAAA+AGG + chr1_1:63563313-63563332 None:intergenic 35.0%
ATGTGTACTCGTACATACAA+GGG + chr1_1:63563379-63563398 None:intergenic 35.0%
TATGTGTACTCGTACATACA+AGG + chr1_1:63563380-63563399 None:intergenic 35.0%
TGTATGTACGAGTACACATA+TGG - chr1_1:63563380-63563399 Msa0035390:intron 35.0%
! AATGCAGGATATTTTGTTGG+TGG - chr1_1:63563445-63563464 Msa0035390:intron 35.0%
!!! GGATATTTTGTTGGTGGTTT+AGG - chr1_1:63563451-63563470 Msa0035390:intron 35.0%
ATCTTTCTGTCTCTTCACTT+TGG - chr1_1:63563613-63563632 Msa0035390:CDS 35.0%
AAACTGGAAGACGATTTGAA+AGG + chr1_1:63563761-63563780 None:intergenic 35.0%
CAACCCATTTGTTTGTAAAC+TGG + chr1_1:63563777-63563796 None:intergenic 35.0%
CAGTTTACAAACAAATGGGT+TGG - chr1_1:63563775-63563794 Msa0035390:CDS 35.0%
!!! GATATGGTGGTTTTAGTTGT+TGG - chr1_1:63564139-63564158 Msa0035390:intron 35.0%
TCTTCTATGATGACCTATCT+TGG - chr1_1:63564170-63564189 Msa0035390:intron 35.0%
CTTCTATGATGACCTATCTT+GGG - chr1_1:63564171-63564190 Msa0035390:intron 35.0%
CTGTTGCAATGAATTCCATA+GGG - chr1_1:63564200-63564219 Msa0035390:intron 35.0%
AGAATTTCTCATTACATGGG+AGG - chr1_1:63564467-63564486 Msa0035390:intron 35.0%
AGGAATAAGTCGGTAATGAA+AGG - chr1_1:63564514-63564533 Msa0035390:intron 35.0%
AGTTGAACACAACGGAATAA+AGG + chr1_1:63564609-63564628 None:intergenic 35.0%
CTTCCTACACCAAAAGATAT+GGG + chr1_1:63564688-63564707 None:intergenic 35.0%
ACTTCCTACACCAAAAGATA+TGG + chr1_1:63564689-63564708 None:intergenic 35.0%
TTTCTTAACACGGGAAAATC+AGG + chr1_1:63564884-63564903 None:intergenic 35.0%
TTCAACTCTCAGATTGATGA+TGG - chr1_1:63564988-63565007 Msa0035390:intron 35.0%
! TCAACTCTCAGATTGATGAT+GGG - chr1_1:63564989-63565008 Msa0035390:intron 35.0%
! AAAGCATTCATCAAAGCTTC+AGG + chr1_1:63565045-63565064 None:intergenic 35.0%
!! TTTTCGCTTTTGCTTTCAAG+TGG - chr1_1:63565063-63565082 Msa0035390:intron 35.0%
TGCTAAAAATGTGCTTGCTT+TGG - chr1_1:63565134-63565153 Msa0035390:intron 35.0%
! ACTTGTTGGATTTGAGAAAC+AGG + chr1_1:63565231-63565250 None:intergenic 35.0%
TCAAATCCAACAAGTAGCAT+GGG - chr1_1:63565236-63565255 Msa0035390:intron 35.0%
TCAACAAACTTCCTTGAGAA+TGG - chr1_1:63565384-63565403 Msa0035390:intron 35.0%
AGAAAGTGAAATGCTCGAAA+TGG - chr1_1:63565479-63565498 Msa0035390:intron 35.0%
! TTCTGTTATAGGTTGAAGAG+AGG - chr1_1:63565651-63565670 Msa0035390:intron 35.0%
TGCATTTATGAGATATACGG+TGG - chr1_1:63565794-63565813 Msa0035390:intron 35.0%
AAAGATCCATGGTGCAAAAA+TGG + chr1_1:63565833-63565852 None:intergenic 35.0%
ACCATGGATCTTTATATCGT+GGG - chr1_1:63565840-63565859 Msa0035390:intron 35.0%
TTCAGAGAAAGATACTCACA+AGG + chr1_1:63565871-63565890 None:intergenic 35.0%
TAGATATACTTGCAAGAAGG+GGG + chr1_1:63565938-63565957 None:intergenic 35.0%
! TTTTTCTCTATTTCCCTTGG+GGG - chr1_1:63566294-63566313 Msa0035390:intron 35.0%
ACTCTTACATGTTAATCTGC+TGG - chr1_1:63566354-63566373 Msa0035390:intron 35.0%
! ATCATCAGAGCTTTGTCTTT+GGG + chr1_1:63566434-63566453 None:intergenic 35.0%
GTTTGCAATTGCAAATAGAG+TGG - chr1_1:63566528-63566547 Msa0035390:CDS 35.0%
ATAGAGTGGATAGTATTCAC+AGG - chr1_1:63566542-63566561 Msa0035390:CDS 35.0%
TGATTCAAATCAAGCAACAC+AGG + chr1_1:63566915-63566934 None:intergenic 35.0%
!!! AATATATTTTTGGGGACGCT+TGG - chr1_1:63567017-63567036 Msa0035390:intron 35.0%
!! GCAACAATGCACTTACTTTT+TGG - chr1_1:63567064-63567083 Msa0035390:intron 35.0%
GGAACTGCAGGTATATAATA+TGG - chr1_1:63567112-63567131 Msa0035390:intron 35.0%
AGAATAGAATGTATCAGGGA+AGG + chr1_1:63567208-63567227 None:intergenic 35.0%
TTCCTACGCATTAGAATGTT+TGG - chr1_1:63567252-63567271 Msa0035390:intron 35.0%
TTCCAAACATTCTAATGCGT+AGG + chr1_1:63567257-63567276 None:intergenic 35.0%
! AACATCCAGAAACTCCATTT+TGG + chr1_1:63567355-63567374 None:intergenic 35.0%
! AAAATGGAGTTTCTGGATGT+TGG - chr1_1:63567354-63567373 Msa0035390:intron 35.0%
ATTGTGCTTCCTATTGCATT+AGG - chr1_1:63567414-63567433 Msa0035390:intron 35.0%
TTATGAACTCCAGGAAAGAA+GGG + chr1_1:63567559-63567578 None:intergenic 35.0%
ATTATGAACTCCAGGAAAGA+AGG + chr1_1:63567560-63567579 None:intergenic 35.0%
TGGAGTTCATAATGTTCTCT+CGG - chr1_1:63567567-63567586 Msa0035390:intron 35.0%
AAATACAGCATGTGCTTGTT+AGG - chr1_1:63567745-63567764 Msa0035390:intron 35.0%
! GTAACAGTGTTTTTCCTAAG+TGG + chr1_1:63567849-63567868 None:intergenic 35.0%
!! AAATCCTAATACTGGCTCTT+TGG - chr1_1:63567934-63567953 Msa0035390:intron 35.0%
CTATACGAAAGGATGAAGTA+TGG - chr1_1:63568193-63568212 Msa0035390:intron 35.0%
TTTACACACACATGCACTTA+TGG - chr1_1:63568262-63568281 Msa0035390:intron 35.0%
TTCCCGAATGAAGCAAAATT+GGG + chr1_1:63568289-63568308 None:intergenic 35.0%
TTTCCCGAATGAAGCAAAAT+TGG + chr1_1:63568290-63568309 None:intergenic 35.0%
GTTTGAAAGGAAATCGACCA+CGG + chr1_1:63559050-63559069 None:intergenic 40.0%
! TTTTGCGAGAGAAACGGTTA+TGG + chr1_1:63559149-63559168 None:intergenic 40.0%
! GTAAGCTTTTGCGAGAGAAA+CGG + chr1_1:63559155-63559174 None:intergenic 40.0%
GAAGATCAATGCGTAGAAAC+CGG + chr1_1:63559196-63559215 None:intergenic 40.0%
CTGCATAACCATTGAAGCAA+AGG + chr1_1:63559238-63559257 None:intergenic 40.0%
CTCATTCCTCTGTCGAAAAA+CGG + chr1_1:63559274-63559293 None:intergenic 40.0%
! AGTACGCTTAAGTTTGTTCC+TGG - chr1_1:63559330-63559349 Msa0035390:three_prime_UTR 40.0%
! GTACGCTTAAGTTTGTTCCT+GGG - chr1_1:63559331-63559350 Msa0035390:three_prime_UTR 40.0%
TTTCGCAGAGGTTTCTTTCT+GGG - chr1_1:63559358-63559377 Msa0035390:three_prime_UTR 40.0%
TAGATGTTGCATTGGATGTG+TGG - chr1_1:63559531-63559550 Msa0035390:three_prime_UTR 40.0%
GTGGTAACATTAGACGAGAT+AGG - chr1_1:63559550-63559569 Msa0035390:exon 40.0%
ACTACTAGGCGTAGATGATT+TGG - chr1_1:63559623-63559642 Msa0035390:CDS 40.0%
CTACTAGGCGTAGATGATTT+GGG - chr1_1:63559624-63559643 Msa0035390:CDS 40.0%
GACTTGTAGTTTCCGAACTT+AGG - chr1_1:63559660-63559679 Msa0035390:CDS 40.0%
CTGATCTACTCTCCTAAGTT+CGG + chr1_1:63559675-63559694 None:intergenic 40.0%
AAACCTTATCCCACTAAGTG+GGG + chr1_1:63559816-63559835 None:intergenic 40.0%
CAAACCTTATCCCACTAAGT+GGG + chr1_1:63559817-63559836 None:intergenic 40.0%
AATGGGCCAAAGTTAGTTAC+TGG - chr1_1:63559975-63559994 Msa0035390:intron 40.0%
ATGGGCCAAAGTTAGTTACT+GGG - chr1_1:63559976-63559995 Msa0035390:intron 40.0%
AATGCTAAAGAGTAGGGCAT+TGG - chr1_1:63560060-63560079 Msa0035390:CDS 40.0%
!! CCTCTTAGCCTTAATTGAAC+GGG + chr1_1:63560289-63560308 None:intergenic 40.0%
! GGTTTGCTTCAATAAACTGG+TGG - chr1_1:63560505-63560524 Msa0035390:intron 40.0%
GTGGAATTACATCATGACTG+TGG + chr1_1:63560681-63560700 None:intergenic 40.0%
! TAGACTTTGCACTTTTGTCG+TGG + chr1_1:63560700-63560719 None:intergenic 40.0%
AGGATTTGCCTAGTGAATGT+TGG + chr1_1:63560738-63560757 None:intergenic 40.0%
GTTTGAACAGCACAGGAATA+AGG + chr1_1:63560758-63560777 None:intergenic 40.0%
AGAATCCCTGCATATGAACT+TGG - chr1_1:63560816-63560835 Msa0035390:CDS 40.0%
GAATCCCTGCATATGAACTT+GGG - chr1_1:63560817-63560836 Msa0035390:CDS 40.0%
GAATACCCAAGTTCATATGC+AGG + chr1_1:63560825-63560844 None:intergenic 40.0%
!!! TCAGATTTTAGGGCACATGA+CGG - chr1_1:63561197-63561216 Msa0035390:CDS 40.0%
AGATCCCCAATCATTGATGT+TGG - chr1_1:63561221-63561240 Msa0035390:CDS 40.0%
!! ATGCTGCTTTGCTAAAGACT+TGG - chr1_1:63561336-63561355 Msa0035390:CDS 40.0%
!! TGCTGCTTTGCTAAAGACTT+GGG - chr1_1:63561337-63561356 Msa0035390:CDS 40.0%
GACGCGGAAAAAAAAATCAG+GGG + chr1_1:63561490-63561509 None:intergenic 40.0%
GAGACGCGGAAAAAAAAATC+AGG + chr1_1:63561492-63561511 None:intergenic 40.0%
!!! TCTTGCCAGATTTTTGGAGT+AGG - chr1_1:63561510-63561529 Msa0035390:intron 40.0%
!!! CTTGCCAGATTTTTGGAGTA+GGG - chr1_1:63561511-63561530 Msa0035390:intron 40.0%
TCCATATGGGAAAACATAGG+TGG - chr1_1:63561549-63561568 Msa0035390:intron 40.0%
! ACCACCTATGTTTTCCCATA+TGG + chr1_1:63561553-63561572 None:intergenic 40.0%
ATATGGGAAAACATAGGTGG+TGG - chr1_1:63561552-63561571 Msa0035390:intron 40.0%
GTTCTGTACTGAAAGGAGAA+AGG + chr1_1:63561578-63561597 None:intergenic 40.0%
! TTTTTCCCCTCTTTTCCGTT+TGG - chr1_1:63561780-63561799 Msa0035390:intron 40.0%
AAAACTACGGGGAAACCAAA+CGG + chr1_1:63561798-63561817 None:intergenic 40.0%
CAAAAGAAGCCATTTCAAGG+TGG - chr1_1:63561846-63561865 Msa0035390:intron 40.0%
!! GAGCTTTGGATTAGCATGTT+AGG - chr1_1:63561915-63561934 Msa0035390:intron 40.0%
GTATGAACTGTAGGTAACTC+TGG - chr1_1:63562169-63562188 Msa0035390:intron 40.0%
CATCACATTGACACTGATCA+GGG + chr1_1:63562436-63562455 None:intergenic 40.0%
TCAGTGTCAATGTGATGCTT+AGG - chr1_1:63562439-63562458 Msa0035390:CDS 40.0%
ATTAGGGTAGGGTGTATGTT+AGG - chr1_1:63562931-63562950 Msa0035390:CDS 40.0%
! CTCTTTAAAAAGCCCTCCAT+TGG - chr1_1:63563082-63563101 Msa0035390:intron 40.0%
GATATCCTCCTTTGTACCAA+TGG + chr1_1:63563101-63563120 None:intergenic 40.0%
ACTGGTTAATCCAGTGTGAA+AGG - chr1_1:63563142-63563161 Msa0035390:intron 40.0%
!! ACTCTAAGACTGTTCTGTTC+TGG - chr1_1:63563243-63563262 Msa0035390:intron 40.0%
!! CTCTAAGACTGTTCTGTTCT+GGG - chr1_1:63563244-63563263 Msa0035390:intron 40.0%
TGTGTACTCGTACATACAAG+GGG + chr1_1:63563378-63563397 None:intergenic 40.0%
AATCAGAGTTAAAGCAGGGA+TGG + chr1_1:63563539-63563558 None:intergenic 40.0%
ACGAAGCAGTGAGCATTATA+TGG - chr1_1:63563589-63563608 Msa0035390:CDS 40.0%
TGTCTCTTCACTTTGGTTGT+AGG - chr1_1:63563620-63563639 Msa0035390:CDS 40.0%
! ATATTTGTGCAGCCTTATGC+AGG - chr1_1:63563689-63563708 Msa0035390:CDS 40.0%
AACAAAAAGGCTCCTGCATA+AGG + chr1_1:63563704-63563723 None:intergenic 40.0%
ATCTGGAAAGACAATGACAC+TGG + chr1_1:63563841-63563860 None:intergenic 40.0%
GTTACGTTTGCACAAAGACT+TGG - chr1_1:63563884-63563903 Msa0035390:intron 40.0%
TTATATAGCGAGCTTGACAC+TGG - chr1_1:63564007-63564026 Msa0035390:CDS 40.0%
!!! GGAAACTTTTTTGTGATCCC+TGG - chr1_1:63564028-63564047 Msa0035390:CDS 40.0%
!! CTCAGAGAACTTAGTGGATT+TGG - chr1_1:63564109-63564128 Msa0035390:intron 40.0%
CAACAGCATATTCCCAAGAT+AGG + chr1_1:63564186-63564205 None:intergenic 40.0%
GCTGTTGCAATGAATTCCAT+AGG - chr1_1:63564199-63564218 Msa0035390:intron 40.0%
! CTTGCATATTTTGTCAGCAG+AGG + chr1_1:63564226-63564245 None:intergenic 40.0%
CTCTGCTGACAAAATATGCA+AGG - chr1_1:63564224-63564243 Msa0035390:intron 40.0%
TGCTGACAAAATATGCAAGG+AGG - chr1_1:63564227-63564246 Msa0035390:intron 40.0%
CATCAGTTGAATTGCCACAA+AGG + chr1_1:63564285-63564304 None:intergenic 40.0%
CTTTGTGGCAATTCAACTGA+TGG - chr1_1:63564283-63564302 Msa0035390:intron 40.0%
! TGGTTATGATGACGCTTTAC+AGG - chr1_1:63564303-63564322 Msa0035390:intron 40.0%
GGAGGTAACAGTAAGAAAAG+TGG - chr1_1:63564485-63564504 Msa0035390:intron 40.0%
GTAACAGTAAGAAAAGTGGC+AGG - chr1_1:63564489-63564508 Msa0035390:intron 40.0%
AGTAAGAAAAGTGGCAGGAT+AGG - chr1_1:63564494-63564513 Msa0035390:intron 40.0%
!! GATCCCATATCTTTTGGTGT+AGG - chr1_1:63564682-63564701 Msa0035390:intron 40.0%
TAGGAAGTTGCTTCACGTTT+GGG - chr1_1:63564701-63564720 Msa0035390:intron 40.0%
CATCTTGAGCAGAACCATAT+AGG + chr1_1:63564802-63564821 None:intergenic 40.0%
GAAAATCAGGTGCAATGACA+GGG + chr1_1:63564871-63564890 None:intergenic 40.0%
GTGGCTATGGTTACAGAAAT+CGG + chr1_1:63564945-63564964 None:intergenic 40.0%
TGAAAATGAAGCAGTGGCTA+TGG + chr1_1:63564958-63564977 None:intergenic 40.0%
!! CAACTCTCAGATTGATGATG+GGG - chr1_1:63564990-63565009 Msa0035390:intron 40.0%
!! AGATTGATGATGGGGTTCAT+GGG - chr1_1:63564998-63565017 Msa0035390:intron 40.0%
! CTTGCTTTGGATTGCATAAC+TGG - chr1_1:63565147-63565166 Msa0035390:intron 40.0%
CCAGGTAGTAAAGAATCTGA+AGG + chr1_1:63565207-63565226 None:intergenic 40.0%
CCTTCAGATTCTTTACTACC+TGG - chr1_1:63565204-63565223 Msa0035390:intron 40.0%
CTCAAATCCAACAAGTAGCA+TGG - chr1_1:63565235-63565254 Msa0035390:intron 40.0%
CAAATCCAACAAGTAGCATG+GGG - chr1_1:63565237-63565256 Msa0035390:intron 40.0%
!! TTTCTCAACGGCATTGACAA+CGG + chr1_1:63565343-63565362 None:intergenic 40.0%
ACTAGCCAACTCTTTCTCAA+CGG + chr1_1:63565355-63565374 None:intergenic 40.0%
GAACATCTGTTCCATTCTCA+AGG + chr1_1:63565398-63565417 None:intergenic 40.0%
TTGGTCAGTTCGTCTTGTAT+TGG + chr1_1:63565420-63565439 None:intergenic 40.0%
ACAAGACGAACTGACCAAAT+TGG - chr1_1:63565422-63565441 Msa0035390:intron 40.0%
AAGAATGTCCCAGTCCAATT+TGG + chr1_1:63565439-63565458 None:intergenic 40.0%
TGAAATGCTCGAAATGGAAC+AGG - chr1_1:63565485-63565504 Msa0035390:intron 40.0%
! GTTATAGGTTGAAGAGAGGT+TGG - chr1_1:63565655-63565674 Msa0035390:intron 40.0%
! TGGAGAAAGATGTTGGTGTT+TGG - chr1_1:63565675-63565694 Msa0035390:intron 40.0%
! GGAGAAAGATGTTGGTGTTT+GGG - chr1_1:63565676-63565695 Msa0035390:intron 40.0%
! TGAAGTTTGAAGCCAATGAG+CGG - chr1_1:63565735-63565754 Msa0035390:intron 40.0%
CACCATGGATCTTTATATCG+TGG - chr1_1:63565839-63565858 Msa0035390:intron 40.0%
ACCCACGATATAAAGATCCA+TGG + chr1_1:63565844-63565863 None:intergenic 40.0%
AGATATACTTGCAAGAAGGG+GGG + chr1_1:63565937-63565956 None:intergenic 40.0%
ACCTTATAATTAGGGGACAG+AGG + chr1_1:63566108-63566127 None:intergenic 40.0%
! TTTTCTCTATTTCCCTTGGG+GGG - chr1_1:63566295-63566314 Msa0035390:intron 40.0%
! CATCATCAGAGCTTTGTCTT+TGG + chr1_1:63566435-63566454 None:intergenic 40.0%
! AAGACAAAGCTCTGATGATG+TGG - chr1_1:63566435-63566454 Msa0035390:intron 40.0%
CCATTTCACAGAGAATGTCA+CGG + chr1_1:63566501-63566520 None:intergenic 40.0%
CGTGACATTCTCTGTGAAAT+GGG - chr1_1:63566499-63566518 Msa0035390:intron 40.0%
TGCGCTTAGTGCTTTGATTA+AGG + chr1_1:63566770-63566789 None:intergenic 40.0%
AAGCAACACAGGTGCAATAA+GGG + chr1_1:63566904-63566923 None:intergenic 40.0%
ATTGTCAGTGGAAGCTGAAA+GGG - chr1_1:63566954-63566973 Msa0035390:intron 40.0%
ACAATGCATGAGAATGCTAG+AGG - chr1_1:63566988-63567007 Msa0035390:intron 40.0%
CAATGCATGAGAATGCTAGA+GGG - chr1_1:63566989-63567008 Msa0035390:intron 40.0%
AATGCATGAGAATGCTAGAG+GGG - chr1_1:63566990-63567009 Msa0035390:intron 40.0%
! AAGTGCATTGTTGCTTCCTA+TGG + chr1_1:63567058-63567077 None:intergenic 40.0%
! TGGGATGCTTTGCAATTTTC+AGG + chr1_1:63567184-63567203 None:intergenic 40.0%
GAAGTCCAAAATGGAGTTTC+TGG - chr1_1:63567347-63567366 Msa0035390:intron 40.0%
TATGAACTCCAGGAAAGAAG+GGG + chr1_1:63567558-63567577 None:intergenic 40.0%
GAGAGAACATTATGAACTCC+AGG + chr1_1:63567568-63567587 None:intergenic 40.0%
!! GTCTCTGTGAAAAGCATCAA+TGG + chr1_1:63567719-63567738 None:intergenic 40.0%
!! GTTAACTTGCTTACTGCTTG+AGG - chr1_1:63567787-63567806 Msa0035390:intron 40.0%
ACACTGTTACTGTCGAATGT+TGG - chr1_1:63567859-63567878 Msa0035390:intron 40.0%
TCTTCCAAAGAGCCAGTATT+AGG + chr1_1:63567941-63567960 None:intergenic 40.0%
AACAACGGAAGAGTTTCATG+TGG - chr1_1:63567975-63567994 Msa0035390:intron 40.0%
ACAACGGAAGAGTTTCATGT+GGG - chr1_1:63567976-63567995 Msa0035390:intron 40.0%
ACTGGCAAGGGATTTATGAA+AGG - chr1_1:63568113-63568132 Msa0035390:intron 40.0%
CTGGCAAGGGATTTATGAAA+GGG - chr1_1:63568114-63568133 Msa0035390:intron 40.0%
AAGGGATTTATGAAAGGGAG+AGG - chr1_1:63568119-63568138 Msa0035390:intron 40.0%
AGGGATTTATGAAAGGGAGA+GGG - chr1_1:63568120-63568139 Msa0035390:intron 40.0%
GGTTACAAGCAGAAATCACT+TGG - chr1_1:63568214-63568233 Msa0035390:intron 40.0%
! GGACCCAATTTTGCTTCATT+CGG - chr1_1:63568283-63568302 Msa0035390:intron 40.0%
! GACCCAATTTTGCTTCATTC+GGG - chr1_1:63568284-63568303 Msa0035390:intron 40.0%
GGGAAAATTGTCTAGCGAAT+TGG - chr1_1:63568304-63568323 Msa0035390:intron 40.0%
CTCTATGATATGTGCCAATG+TGG + chr1_1:63568352-63568371 None:intergenic 40.0%
!! TGTCTCAAGCTTTTCTGAGA+CGG + chr1_1:63568424-63568443 None:intergenic 40.0%
TCATGGTCAATTAAGCAGCA+TGG - chr1_1:63568499-63568518 Msa0035390:CDS 40.0%
! AGCTCAAGAGTACACTGATT+AGG + chr1_1:63568779-63568798 None:intergenic 40.0%
TGGCTAGGGTTTCGTTTGAA+AGG + chr1_1:63559063-63559082 None:intergenic 45.0%
!! ATTTTTGTCGGTGGTGGCTA+GGG + chr1_1:63559077-63559096 None:intergenic 45.0%
! AGAGAGATTTTTGTCGGTGG+TGG + chr1_1:63559083-63559102 None:intergenic 45.0%
! AGGAGAGAGATTTTTGTCGG+TGG + chr1_1:63559086-63559105 None:intergenic 45.0%
! CGGAGGAGAGAGATTTTTGT+CGG + chr1_1:63559089-63559108 None:intergenic 45.0%
GGAACGAGGTAATTGACGAT+CGG + chr1_1:63559109-63559128 None:intergenic 45.0%
GTTATGGAGATGAGATCGAG+TGG + chr1_1:63559133-63559152 None:intergenic 45.0%
ATGCGTAGAAACCGGACTTA+GGG + chr1_1:63559188-63559207 None:intergenic 45.0%
AATGCGTAGAAACCGGACTT+AGG + chr1_1:63559189-63559208 None:intergenic 45.0%
TCTCTTCGCCTTTGCTTCAA+TGG - chr1_1:63559227-63559246 Msa0035390:three_prime_UTR 45.0%
!! TTACGTCCGTTTTTCGACAG+AGG - chr1_1:63559265-63559284 Msa0035390:three_prime_UTR 45.0%
CTTCGTGAAGGTCTTGAGTT+TGG - chr1_1:63559306-63559325 Msa0035390:three_prime_UTR 45.0%
GTTTCGCAGAGGTTTCTTTC+TGG - chr1_1:63559357-63559376 Msa0035390:three_prime_UTR 45.0%
TTCGCAGAGGTTTCTTTCTG+GGG - chr1_1:63559359-63559378 Msa0035390:three_prime_UTR 45.0%
GGAGAGTAGATCAGATGAAG+AGG - chr1_1:63559681-63559700 Msa0035390:CDS 45.0%
AACCTTATCCCACTAAGTGG+GGG + chr1_1:63559815-63559834 None:intergenic 45.0%
CCAAACCTTATCCCACTAAG+TGG + chr1_1:63559818-63559837 None:intergenic 45.0%
CCACTTAGTGGGATAAGGTT+TGG - chr1_1:63559815-63559834 Msa0035390:CDS 45.0%
!! AGAGTAGGGCATTGGTTAAG+AGG - chr1_1:63560068-63560087 Msa0035390:CDS 45.0%
CCCGTTCAATTAAGGCTAAG+AGG - chr1_1:63560286-63560305 Msa0035390:CDS 45.0%
CTACTTAGTTCACTCGTGCA+GGG - chr1_1:63560362-63560381 Msa0035390:intron 45.0%
TACTTAGTTCACTCGTGCAG+GGG - chr1_1:63560363-63560382 Msa0035390:intron 45.0%
GGTGGTCCTGTAATGAAACA+TGG - chr1_1:63560523-63560542 Msa0035390:intron 45.0%
GCAAAAAATGCAGGCCCTAA+AGG - chr1_1:63560989-63561008 Msa0035390:intron 45.0%
CAAAAATCTGGCAAGAGACG+CGG + chr1_1:63561506-63561525 None:intergenic 45.0%
!!! AGATTTTTGGAGTAGGGCGT+GGG - chr1_1:63561517-63561536 Msa0035390:intron 45.0%
CGCTCCATATGGGAAAACAT+AGG - chr1_1:63561546-63561565 Msa0035390:intron 45.0%
!! CCTTGCTGTTCTGTACTGAA+AGG + chr1_1:63561585-63561604 None:intergenic 45.0%
CCTTTCAGTACAGAACAGCA+AGG - chr1_1:63561582-63561601 Msa0035390:intron 45.0%
AACAGCAAGGCCAGATTGAT+TGG - chr1_1:63561595-63561614 Msa0035390:intron 45.0%
GGAAACCAAACGGAAAAGAG+GGG + chr1_1:63561788-63561807 None:intergenic 45.0%
GGGAAACCAAACGGAAAAGA+GGG + chr1_1:63561789-63561808 None:intergenic 45.0%
!!! TGGTTTCCCCGTAGTTTTGA+AGG - chr1_1:63561800-63561819 Msa0035390:intron 45.0%
! GGATTAGCATGTTAGGCTTG+TGG - chr1_1:63561922-63561941 Msa0035390:intron 45.0%
TTAGCATGTTAGGCTTGTGG+TGG - chr1_1:63561925-63561944 Msa0035390:intron 45.0%
TAGCATGTTAGGCTTGTGGT+GGG - chr1_1:63561926-63561945 Msa0035390:intron 45.0%
!! CTTGTGGTGGGTTTCTGATT+TGG - chr1_1:63561938-63561957 Msa0035390:CDS 45.0%
! AGCAACACTGCTTCAGCTTT+TGG + chr1_1:63561967-63561986 None:intergenic 45.0%
GCATCACATTGACACTGATC+AGG + chr1_1:63562437-63562456 None:intergenic 45.0%
TCTCAGGTATTTGAGAGACC+TGG - chr1_1:63562495-63562514 Msa0035390:CDS 45.0%
CAGAGAGAAACGGAAGTTGT+GGG + chr1_1:63562676-63562695 None:intergenic 45.0%
TCAGAGAGAAACGGAAGTTG+TGG + chr1_1:63562677-63562696 None:intergenic 45.0%
TGGGTCTACATATCAAGACG+TGG + chr1_1:63562910-63562929 None:intergenic 45.0%
ATGTAGACCCACATTAGGGT+AGG - chr1_1:63562919-63562938 Msa0035390:CDS 45.0%
TGTAGACCCACATTAGGGTA+GGG - chr1_1:63562920-63562939 Msa0035390:CDS 45.0%
CATACACCCTACCCTAATGT+GGG + chr1_1:63562929-63562948 None:intergenic 45.0%
ACATACACCCTACCCTAATG+TGG + chr1_1:63562930-63562949 None:intergenic 45.0%
AAAGCCCTCCATTGGTACAA+AGG - chr1_1:63563090-63563109 Msa0035390:intron 45.0%
TCCTCCTTTGTACCAATGGA+GGG + chr1_1:63563097-63563116 None:intergenic 45.0%
ATCCTCCTTTGTACCAATGG+AGG + chr1_1:63563098-63563117 None:intergenic 45.0%
AAGCAGGGATGGTTATGCAT+TGG + chr1_1:63563528-63563547 None:intergenic 45.0%
! GGCAGCATCTTATTTCTCAC+TGG - chr1_1:63563796-63563815 Msa0035390:intron 45.0%
ATACATCTACTGGCGATCCA+GGG + chr1_1:63564048-63564067 None:intergenic 45.0%
TCTGCAGACCATACATCTAC+TGG + chr1_1:63564058-63564077 None:intergenic 45.0%
CTATAGTAAGACCCACACCA+AGG - chr1_1:63564081-63564100 Msa0035390:CDS 45.0%
AAGTTCTCTGAGCTGATCCT+TGG + chr1_1:63564101-63564120 None:intergenic 45.0%
GATCAGCTCAGAGAACTTAG+TGG - chr1_1:63564103-63564122 Msa0035390:intron 45.0%
GTGGCAGGATAGGAATAAGT+CGG - chr1_1:63564504-63564523 Msa0035390:intron 45.0%
GTAGGAAGTTGCTTCACGTT+TGG - chr1_1:63564700-63564719 Msa0035390:intron 45.0%
! TGGTTCTGCTCAAGATGTAC+AGG - chr1_1:63564805-63564824 Msa0035390:intron 45.0%
GGTTCTGCTCAAGATGTACA+GGG - chr1_1:63564806-63564825 Msa0035390:intron 45.0%
GGAAAATCAGGTGCAATGAC+AGG + chr1_1:63564872-63564891 None:intergenic 45.0%
!! CAGATTGATGATGGGGTTCA+TGG - chr1_1:63564997-63565016 Msa0035390:intron 45.0%
!! GATTGATGATGGGGTTCATG+GGG - chr1_1:63564999-63565018 Msa0035390:intron 45.0%
GCTCAAGCTATTGGATCATC+TGG - chr1_1:63565102-63565121 Msa0035390:intron 45.0%
AACTGGCTATGCAAGACTTC+TGG - chr1_1:63565164-63565183 Msa0035390:intron 45.0%
TGGATTTGAGAAACAGGACC+AGG + chr1_1:63565225-63565244 None:intergenic 45.0%
CAATGCCGTTGAGAAAGAGT+TGG - chr1_1:63565347-63565366 Msa0035390:intron 45.0%
ACGAACTGACCAAATTGGAC+TGG - chr1_1:63565427-63565446 Msa0035390:intron 45.0%
CGAACTGACCAAATTGGACT+GGG - chr1_1:63565428-63565447 Msa0035390:intron 45.0%
GAGAGGTTGGAGAAAGATGT+TGG - chr1_1:63565668-63565687 Msa0035390:intron 45.0%
! GAAGTTTGAAGCCAATGAGC+GGG - chr1_1:63565736-63565755 Msa0035390:intron 45.0%
TATGAGATATACGGTGGTGC+TGG - chr1_1:63565800-63565819 Msa0035390:intron 45.0%
GCCTCTGTCCCCTAATTATA+AGG - chr1_1:63566104-63566123 Msa0035390:intron 45.0%
! TCTGATGATGTGGATGCTGT+TGG - chr1_1:63566445-63566464 Msa0035390:intron 45.0%
CCGTGACATTCTCTGTGAAA+TGG - chr1_1:63566498-63566517 Msa0035390:intron 45.0%
GACATTCTCTGTGAAATGGG+AGG - chr1_1:63566502-63566521 Msa0035390:intron 45.0%
GAGTGGATAGTATTCACAGG+AGG - chr1_1:63566545-63566564 Msa0035390:CDS 45.0%
ATAGTATTCACAGGAGGCCT+TGG - chr1_1:63566551-63566570 Msa0035390:CDS 45.0%
CATGACTGAAACCCAATCCA+AGG + chr1_1:63566571-63566590 None:intergenic 45.0%
! CTTGGATTGGGTTTCAGTCA+TGG - chr1_1:63566569-63566588 Msa0035390:CDS 45.0%
CAAGCAACACAGGTGCAATA+AGG + chr1_1:63566905-63566924 None:intergenic 45.0%
AAAGCAGGTAGCATTGTCAG+TGG - chr1_1:63566942-63566961 Msa0035390:intron 45.0%
CATTGTCAGTGGAAGCTGAA+AGG - chr1_1:63566953-63566972 Msa0035390:intron 45.0%
! AGTGGAAGCTGAAAGGGTTT+TGG - chr1_1:63566960-63566979 Msa0035390:intron 45.0%
TCTTAAATGGAGGGAACTGC+AGG - chr1_1:63567100-63567119 Msa0035390:intron 45.0%
!! GCTTTGCAATTTTCAGGCAG+CGG + chr1_1:63567178-63567197 None:intergenic 45.0%
AGAATGTATCAGGGAAGGCT+GGG + chr1_1:63567203-63567222 None:intergenic 45.0%
TAGAATGTATCAGGGAAGGC+TGG + chr1_1:63567204-63567223 None:intergenic 45.0%
AACCACCATCTTCAGGCATA+GGG + chr1_1:63567502-63567521 None:intergenic 45.0%
TAACCACCATCTTCAGGCAT+AGG + chr1_1:63567503-63567522 None:intergenic 45.0%
! TGCCTGAAGATGGTGGTTAT+TGG - chr1_1:63567504-63567523 Msa0035390:intron 45.0%
GACCAATAACCACCATCTTC+AGG + chr1_1:63567509-63567528 None:intergenic 45.0%
! GATGCTTTTCACAGAGACTC+TGG - chr1_1:63567721-63567740 Msa0035390:intron 45.0%
GTTAGGCTCTTCAGAGATTG+AGG - chr1_1:63567762-63567781 Msa0035390:intron 45.0%
! TACTTTTGCTCGTCCCACTT+AGG - chr1_1:63567832-63567851 Msa0035390:intron 45.0%
AACTCTTCCGTTGTTCCACT+AGG + chr1_1:63567970-63567989 None:intergenic 45.0%
! AGATGATGGTGACGATCCAA+GGG - chr1_1:63568057-63568076 Msa0035390:intron 45.0%
ATCCAAGGGATAAGTGGTTG+TGG - chr1_1:63568071-63568090 Msa0035390:intron 45.0%
ATGAAAGGGAGAGGGAAGAA+AGG - chr1_1:63568128-63568147 Msa0035390:intron 45.0%
TCTAGCGAATTGGAGAAGCT+TGG - chr1_1:63568314-63568333 Msa0035390:intron 45.0%
GGAGTCTAACATTGCCACAT+TGG - chr1_1:63568335-63568354 Msa0035390:intron 45.0%
!!! GTCTCAAGCTTTTCTGAGAC+GGG + chr1_1:63568423-63568442 None:intergenic 45.0%
AAGCTTGAGACAGAGAGCAA+AGG - chr1_1:63568432-63568451 Msa0035390:CDS 45.0%
TTAAGCAGCATGGAAGATGC+AGG - chr1_1:63568509-63568528 Msa0035390:CDS 45.0%
!!! TAATTTGTATAAATAATTTA+AGG - chr1_1:63560035-63560054 Msa0035390:CDS 5.0%
!! AATTTGTATAAATAATTTAA+GGG - chr1_1:63560036-63560055 Msa0035390:CDS 5.0%
GATCGAAGAGAATGCGACGT+CGG + chr1_1:63559028-63559047 None:intergenic 50.0%
!! GATTTTTGTCGGTGGTGGCT+AGG + chr1_1:63559078-63559097 None:intergenic 50.0%
ACGAGGTAATTGACGATCGG+AGG + chr1_1:63559106-63559125 None:intergenic 50.0%
ATGGAGATGAGATCGAGTGG+AGG + chr1_1:63559130-63559149 None:intergenic 50.0%
CTCTCTCTCTTCCCTAAGTC+CGG - chr1_1:63559174-63559193 Msa0035390:three_prime_UTR 50.0%
TTTCGACAGAGGAATGAGCG+TGG - chr1_1:63559276-63559295 Msa0035390:three_prime_UTR 50.0%
CGTGGTAGGAATCTTCGTGA+AGG - chr1_1:63559294-63559313 Msa0035390:three_prime_UTR 50.0%
TTCCTGGGAAAGTTTCGCAG+AGG - chr1_1:63559346-63559365 Msa0035390:three_prime_UTR 50.0%
AACCTCTGCGAAACTTTCCC+AGG + chr1_1:63559351-63559370 None:intergenic 50.0%
! CAGAGGTTTCTTTCTGGGGA+TGG - chr1_1:63559363-63559382 Msa0035390:three_prime_UTR 50.0%
! GGATGGACTTGATCGCTTGA+GGG - chr1_1:63559380-63559399 Msa0035390:three_prime_UTR 50.0%
TTGAGGGTTCAGCCTAGGAT+TGG - chr1_1:63559396-63559415 Msa0035390:three_prime_UTR 50.0%
! GCGTAGATGATTTGGGCATG+TGG - chr1_1:63559631-63559650 Msa0035390:CDS 50.0%
GCTACTTAGTTCACTCGTGC+AGG - chr1_1:63560361-63560380 Msa0035390:intron 50.0%
ACTTAGTTCACTCGTGCAGG+GGG - chr1_1:63560364-63560383 Msa0035390:intron 50.0%
TGAACCTGTACTGTAGCCCT+TGG - chr1_1:63560966-63560985 Msa0035390:intron 50.0%
GAACCTGTACTGTAGCCCTT+GGG - chr1_1:63560967-63560986 Msa0035390:intron 50.0%
AGCCCTTGGGCAAAAAATGC+AGG - chr1_1:63560980-63560999 Msa0035390:intron 50.0%
!!! GGCCTGCATTTTTTGCCCAA+GGG + chr1_1:63560985-63561004 None:intergenic 50.0%
AAATGCAGGCCCTAAAGGTG+TGG - chr1_1:63560994-63561013 Msa0035390:intron 50.0%
! AATGCAGGCCCTAAAGGTGT+GGG - chr1_1:63560995-63561014 Msa0035390:intron 50.0%
! TTGGCTAGCCCACACCTTTA+GGG + chr1_1:63561006-63561025 None:intergenic 50.0%
! ATTGGCTAGCCCACACCTTT+AGG + chr1_1:63561007-63561026 None:intergenic 50.0%
! CGCGTCTCTTGCCAGATTTT+TGG - chr1_1:63561504-63561523 Msa0035390:intron 50.0%
CACGCCCTACTCCAAAAATC+TGG + chr1_1:63561518-63561537 None:intergenic 50.0%
!!! CAGATTTTTGGAGTAGGGCG+TGG - chr1_1:63561516-63561535 Msa0035390:intron 50.0%
GGGGAAACCAAACGGAAAAG+AGG + chr1_1:63561790-63561809 None:intergenic 50.0%
GAACTGTAGGTAACTCTGGC+AGG - chr1_1:63562173-63562192 Msa0035390:intron 50.0%
TGTAGGTAACTCTGGCAGGT+AGG - chr1_1:63562177-63562196 Msa0035390:intron 50.0%
GAAGTTGTGGGAGTGAAAGC+AGG + chr1_1:63562664-63562683 None:intergenic 50.0%
CATACATCTACTGGCGATCC+AGG + chr1_1:63564049-63564068 None:intergenic 50.0%
CTGGATCGCCAGTAGATGTA+TGG - chr1_1:63564047-63564066 Msa0035390:CDS 50.0%
! TCTGAGCTGATCCTTGGTGT+GGG + chr1_1:63564095-63564114 None:intergenic 50.0%
! TTTTGTCAGCAGAGGCCCTA+TGG + chr1_1:63564218-63564237 None:intergenic 50.0%
! TCACGTTTGGGACTTCCTCA+TGG - chr1_1:63564713-63564732 Msa0035390:intron 50.0%
TCCAACAAGTAGCATGGGGA+TGG - chr1_1:63565241-63565260 Msa0035390:intron 50.0%
! TCCATCCCCATGCTACTTGT+TGG + chr1_1:63565245-63565264 None:intergenic 50.0%
AAGCCAATGAGCGGGATGAA+GGG - chr1_1:63565744-63565763 Msa0035390:intron 50.0%
!!! GTGTGGCCATTTTTGCACCA+TGG - chr1_1:63565824-63565843 Msa0035390:intron 50.0%
ATACTTGCAAGAAGGGGGGA+AGG + chr1_1:63565933-63565952 None:intergenic 50.0%
ATTCACAGGAGGCCTTGGAT+TGG - chr1_1:63566556-63566575 Msa0035390:CDS 50.0%
TTCACAGGAGGCCTTGGATT+GGG - chr1_1:63566557-63566576 Msa0035390:CDS 50.0%
AGGCAGCGGAAAGATAGCAA+TGG + chr1_1:63567164-63567183 None:intergenic 50.0%
GGGGCAATGAATACATCTGG+CGG + chr1_1:63567460-63567479 None:intergenic 50.0%
ACCACCATCTTCAGGCATAG+GGG + chr1_1:63567501-63567520 None:intergenic 50.0%
ATTGGTCAGCACTGCACAGT+TGG - chr1_1:63567522-63567541 Msa0035390:intron 50.0%
TTGGTCAGCACTGCACAGTT+GGG - chr1_1:63567523-63567542 Msa0035390:intron 50.0%
AACTCCAGGAAAGAAGGGGT+TGG + chr1_1:63567554-63567573 None:intergenic 50.0%
TTTGGAAGAGCAGCACCTAG+TGG - chr1_1:63567952-63567971 Msa0035390:intron 50.0%
AGCAGCACCTAGTGGAACAA+CGG - chr1_1:63567960-63567979 Msa0035390:intron 50.0%
CTAGCTGAAGCTGCAGATGA+TGG - chr1_1:63568043-63568062 Msa0035390:intron 50.0%
! CAGATGATGGTGACGATCCA+AGG - chr1_1:63568056-63568075 Msa0035390:intron 50.0%
GTGACGATCCAAGGGATAAG+TGG - chr1_1:63568065-63568084 Msa0035390:intron 50.0%
AAGTGGTTGTGGCCAATGAC+AGG - chr1_1:63568082-63568101 Msa0035390:intron 50.0%
!!! TCAAGCTTTTCTGAGACGGG+AGG + chr1_1:63568420-63568439 None:intergenic 50.0%
GTCGCATTCTCTTCGATCCG+TGG - chr1_1:63559030-63559049 Msa0035390:three_prime_UTR 55.0%
TGAGATCGAGTGGAGGAACG+AGG + chr1_1:63559123-63559142 None:intergenic 55.0%
GACAGAGGAATGAGCGTGGT+AGG - chr1_1:63559280-63559299 Msa0035390:three_prime_UTR 55.0%
! GGGATGGACTTGATCGCTTG+AGG - chr1_1:63559379-63559398 Msa0035390:three_prime_UTR 55.0%
ATCGCTTGAGGGTTCAGCCT+AGG - chr1_1:63559391-63559410 Msa0035390:three_prime_UTR 55.0%
GGAGCACGAACACCAATCCT+AGG + chr1_1:63559411-63559430 None:intergenic 55.0%
CTAAGTGGGGGTCGACTACA+TGG + chr1_1:63559803-63559822 None:intergenic 55.0%
TGTAGTCGACCCCCACTTAG+TGG - chr1_1:63559803-63559822 Msa0035390:CDS 55.0%
GTAGTCGACCCCCACTTAGT+GGG - chr1_1:63559804-63559823 Msa0035390:CDS 55.0%
GACCCCCACTTAGTGGGATA+AGG - chr1_1:63559810-63559829 Msa0035390:CDS 55.0%
TTGCCCAAGGGCTACAGTAC+AGG + chr1_1:63560973-63560992 None:intergenic 55.0%
!!! GGGCCTGCATTTTTTGCCCA+AGG + chr1_1:63560986-63561005 None:intergenic 55.0%
TGGGAACGCTCGCTCCATAT+GGG - chr1_1:63561536-63561555 Msa0035390:intron 55.0%
GCCCTCCATTGGTACAAAGG+AGG - chr1_1:63563093-63563112 Msa0035390:intron 55.0%
! GGAGCACTCTCCTTTCACAC+TGG + chr1_1:63563155-63563174 None:intergenic 55.0%
CTCTGAGCTGATCCTTGGTG+TGG + chr1_1:63564096-63564115 None:intergenic 55.0%
GAAGCCAATGAGCGGGATGA+AGG - chr1_1:63565743-63565762 Msa0035390:intron 55.0%
AGCCAATGAGCGGGATGAAG+GGG - chr1_1:63565745-63565764 Msa0035390:intron 55.0%
GAAGGGGAGCTTGAGAGAAC+AGG - chr1_1:63565761-63565780 Msa0035390:intron 55.0%
! TATACGGTGGTGCTGGAGTG+TGG - chr1_1:63565807-63565826 Msa0035390:intron 55.0%
CAATGTGGTTCTCCCCCCAA+GGG + chr1_1:63566310-63566329 None:intergenic 55.0%
ACAATGTGGTTCTCCCCCCA+AGG + chr1_1:63566311-63566330 None:intergenic 55.0%
TTTCAGTCATGGCGTGCTGC+TGG - chr1_1:63566580-63566599 Msa0035390:CDS 55.0%
!! TTTTTGGGGACGCTTGGACC+TGG - chr1_1:63567023-63567042 Msa0035390:intron 55.0%
GGGGGGGCAATGAATACATC+TGG + chr1_1:63567463-63567482 None:intergenic 55.0%
CCACCATCTTCAGGCATAGG+GGG + chr1_1:63567500-63567519 None:intergenic 55.0%
GATGCCAACCCCTTCTTTCC+TGG - chr1_1:63567547-63567566 Msa0035390:intron 55.0%
GGCCACAACCACTTATCCCT+TGG + chr1_1:63568076-63568095 None:intergenic 55.0%
GTTGTGGCCAATGACAGGAG+AGG - chr1_1:63568087-63568106 Msa0035390:intron 55.0%
CAGTGCACCTCTCCTGTCAT+TGG + chr1_1:63568097-63568116 None:intergenic 55.0%
! CAATGACAGGAGAGGTGCAC+TGG - chr1_1:63568095-63568114 Msa0035390:intron 55.0%
CAACCGGAGATCGACGACAC+CGG - chr1_1:63558997-63559016 Msa0035390:three_prime_UTR 60.0%
GTGGGAACGCTCGCTCCATA+TGG - chr1_1:63561535-63561554 Msa0035390:intron 60.0%
CTCCCCTTCATCCCGCTCAT+TGG + chr1_1:63565750-63565769 None:intergenic 60.0%
! AGTCATGGCGTGCTGCTGGT+AGG - chr1_1:63566584-63566603 Msa0035390:intron 60.0%
! ATGGCGTGCTGCTGGTAGGA+AGG - chr1_1:63566588-63566607 Msa0035390:intron 60.0%
CTGCCCCCTATGCCTGAAGA+TGG - chr1_1:63567494-63567513 Msa0035390:intron 60.0%
CCCCCTATGCCTGAAGATGG+TGG - chr1_1:63567497-63567516 Msa0035390:intron 60.0%
! ACAGGAGAGGTGCACTGGCA+AGG - chr1_1:63568100-63568119 Msa0035390:intron 60.0%
! CAGGAGAGGTGCACTGGCAA+GGG - chr1_1:63568101-63568120 Msa0035390:intron 60.0%
TCGCACCTCCTCGTCGCAAC+CGG - chr1_1:63558981-63559000 Msa0035390:three_prime_UTR 65.0%
GATCTCCGGTTGCGACGAGG+AGG + chr1_1:63558989-63559008 None:intergenic 65.0%
GTCGATCTCCGGTTGCGACG+AGG + chr1_1:63558992-63559011 None:intergenic 65.0%
TGGGGACGCTTGGACCTGGA+CGG - chr1_1:63567027-63567046 Msa0035390:intron 65.0%
TTCCTATGGCACCCCCGTCC+AGG + chr1_1:63567044-63567063 None:intergenic 65.0%
AGGGGGCAGCGCTTCAGCAT+GGG + chr1_1:63567483-63567502 None:intergenic 65.0%
TAGGGGGCAGCGCTTCAGCA+TGG + chr1_1:63567484-63567503 None:intergenic 65.0%
!! CCGCCGGTGTCGTCGATCTC+CGG + chr1_1:63559003-63559022 None:intergenic 70.0%
CCGGAGATCGACGACACCGG+CGG - chr1_1:63559000-63559019 Msa0035390:three_prime_UTR 70.0%
!! GAATGCGACGTCGGTGCCGC+CGG + chr1_1:63559019-63559038 None:intergenic 70.0%
GGGGACGCTTGGACCTGGAC+GGG - chr1_1:63567028-63567047 Msa0035390:intron 70.0%
GGGACGCTTGGACCTGGACG+GGG - chr1_1:63567029-63567048 Msa0035390:intron 70.0%
GGACGCTTGGACCTGGACGG+GGG - chr1_1:63567030-63567049 Msa0035390:intron 70.0%
!! GACCTGGACGGGGGTGCCAT+AGG - chr1_1:63567039-63567058 Msa0035390:intron 70.0%
GGCAGCGCTTCAGCATGGGG+GGG + chr1_1:63567479-63567498 None:intergenic 70.0%
GGGCAGCGCTTCAGCATGGG+GGG + chr1_1:63567480-63567499 None:intergenic 70.0%
GGGGCAGCGCTTCAGCATGG+GGG + chr1_1:63567481-63567500 None:intergenic 70.0%
GGGGGCAGCGCTTCAGCATG+GGG + chr1_1:63567482-63567501 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 63558970 63568832 63558970 ID=Msa0035390;Name=Msa0035390
chr1_1 mRNA 63558970 63568832 63558970 ID=Msa0035390-mRNA-1;Parent=Msa0035390;Name=Msa0035390-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.92|0.93|1|0.78|0.8|15|568|1030
chr1_1 exon 63558970 63559050 63558970 ID=Msa0035390-mRNA-1:exon:20246;Parent=Msa0035390-mRNA-1
chr1_1 exon 63559072 63559948 63559072 ID=Msa0035390-mRNA-1:exon:20245;Parent=Msa0035390-mRNA-1
chr1_1 exon 63560019 63560100 63560019 ID=Msa0035390-mRNA-1:exon:20244;Parent=Msa0035390-mRNA-1
chr1_1 exon 63560214 63560366 63560214 ID=Msa0035390-mRNA-1:exon:20243;Parent=Msa0035390-mRNA-1
chr1_1 exon 63560681 63560853 63560681 ID=Msa0035390-mRNA-1:exon:20242;Parent=Msa0035390-mRNA-1
chr1_1 exon 63561193 63561381 63561193 ID=Msa0035390-mRNA-1:exon:20241;Parent=Msa0035390-mRNA-1
chr1_1 exon 63561931 63562140 63561931 ID=Msa0035390-mRNA-1:exon:20240;Parent=Msa0035390-mRNA-1
chr1_1 exon 63562296 63562802 63562296 ID=Msa0035390-mRNA-1:exon:20239;Parent=Msa0035390-mRNA-1
chr1_1 exon 63562895 63563098 63562895 ID=Msa0035390-mRNA-1:exon:20238;Parent=Msa0035390-mRNA-1
chr1_1 exon 63563478 63563798 63563478 ID=Msa0035390-mRNA-1:exon:20237;Parent=Msa0035390-mRNA-1
chr1_1 exon 63563930 63564101 63563930 ID=Msa0035390-mRNA-1:exon:20236;Parent=Msa0035390-mRNA-1
chr1_1 exon 63565938 63565988 63565938 ID=Msa0035390-mRNA-1:exon:20235;Parent=Msa0035390-mRNA-1
chr1_1 exon 63566180 63566283 63566180 ID=Msa0035390-mRNA-1:exon:20234;Parent=Msa0035390-mRNA-1
chr1_1 exon 63566515 63566601 63566515 ID=Msa0035390-mRNA-1:exon:20233;Parent=Msa0035390-mRNA-1
chr1_1 exon 63568383 63568832 63568383 ID=Msa0035390-mRNA-1:exon:20232;Parent=Msa0035390-mRNA-1
chr1_1 CDS 63568383 63568832 63568383 ID=Msa0035390-mRNA-1:cds;Parent=Msa0035390-mRNA-1
chr1_1 CDS 63566515 63566601 63566515 ID=Msa0035390-mRNA-1:cds;Parent=Msa0035390-mRNA-1
chr1_1 CDS 63566180 63566283 63566180 ID=Msa0035390-mRNA-1:cds;Parent=Msa0035390-mRNA-1
chr1_1 CDS 63565938 63565988 63565938 ID=Msa0035390-mRNA-1:cds;Parent=Msa0035390-mRNA-1
chr1_1 CDS 63563930 63564101 63563930 ID=Msa0035390-mRNA-1:cds;Parent=Msa0035390-mRNA-1
chr1_1 CDS 63563478 63563798 63563478 ID=Msa0035390-mRNA-1:cds;Parent=Msa0035390-mRNA-1
chr1_1 CDS 63562895 63563098 63562895 ID=Msa0035390-mRNA-1:cds;Parent=Msa0035390-mRNA-1
chr1_1 CDS 63562296 63562802 63562296 ID=Msa0035390-mRNA-1:cds;Parent=Msa0035390-mRNA-1
chr1_1 CDS 63561931 63562140 63561931 ID=Msa0035390-mRNA-1:cds;Parent=Msa0035390-mRNA-1
chr1_1 CDS 63561193 63561381 63561193 ID=Msa0035390-mRNA-1:cds;Parent=Msa0035390-mRNA-1
chr1_1 CDS 63560681 63560853 63560681 ID=Msa0035390-mRNA-1:cds;Parent=Msa0035390-mRNA-1
chr1_1 CDS 63560214 63560366 63560214 ID=Msa0035390-mRNA-1:cds;Parent=Msa0035390-mRNA-1
chr1_1 CDS 63560019 63560100 63560019 ID=Msa0035390-mRNA-1:cds;Parent=Msa0035390-mRNA-1
chr1_1 CDS 63559559 63559948 63559559 ID=Msa0035390-mRNA-1:cds;Parent=Msa0035390-mRNA-1
chr1_1 three_prime_UTR 63559072 63559558 63559072 ID=Msa0035390-mRNA-1:three_prime_utr;Parent=Msa0035390-mRNA-1
chr1_1 three_prime_UTR 63558970 63559050 63558970 ID=Msa0035390-mRNA-1:three_prime_utr;Parent=Msa0035390-mRNA-1
Gene Sequence

>Msa0035390

ATGGGACTCTCTCGCACCTCCTCGTCGCAACCGGAGATCGACGACACCGGCGGCACCGACGTCGCATTCTCTTCGATCCGTGGTCGATTTCCTTTCAAACGAAACCCTAGCCACCACCGACAAAAATCTCTCTCCTCCGATCGTCAATTACCTCGTTCCTCCACTCGATCTCATCTCCATAACCGTTTCTCTCGCAAAAGCTTACTCTCTCTCTTCCCTAAGTCCGGTTTCTACGCATTGATCTTCGCTGTTGTGTTTCTCTTCGCCTTTGCTTCAATGGTTATGCAGAGTTCTATTACGTCCGTTTTTCGACAGAGGAATGAGCGTGGTAGGAATCTTCGTGAAGGTCTTGAGTTTGGTAGTACGCTTAAGTTTGTTCCTGGGAAAGTTTCGCAGAGGTTTCTTTCTGGGGATGGACTTGATCGCTTGAGGGTTCAGCCTAGGATTGGTATTTTAGGGCACATGACGGTAGATCCCCAATCATTGATGTTGGTTACTGTAATTCAGAATCTACAGAAGTTGGGTTATGTTTTTAAGATTTTTGGAGTAGGGCGTGGGAACGCTCGCTCCATATGGGAAAACATAGGTGGTGGCCTTTCTCCTTTCAGTACAGAACAGCAAGGCCAGATTGATTGGTCAAATTTTGAAGGTATCATTGTTGACTCCCTAGAAGCAAAAGAAGCCATTTCAAGCCTTATGCAGGAGCCTTTTTGTTCAGTACCATTGATATGGATTATTCAAGAAGATAGCCTTTCAAATCGTCTTCCAGTTTACAAACAAATGGGTTGGCAGCATCTTATTTCTCACTGGAGAAGTGCTTTCAGCAGAGCCAGTGTCATTGTCTTTCCAGATTTTACTTATCCGATGTTATATAGCGAGCTTGACACTGGAAACTTTTTTGTGATCCCTGGATCGCCAGTAGATGTATGGTCTGCAGAAAGCTATAGTAAGACCCACACCAAGGATCAGCTCAGAGAACTTAGTGGATTTGGTAAAAATGATATGGTGGTTTTAGTTGTTGGGAGCTCAATCTTCTATGATGACCTATCTTGGGAATATGCTGTTGCAATGAATTCCATAGGGCCTCTGCTGACAAAATATGCAAGGAGGAATGATGCAGCCGAGTCATTCAAGTTTGTTTTCCTTTGTGGCAATTCAACTGATGGTTATGATGACGCTTTACAGGAAGTTGCTTCACGTTTGGGACTTCCTCATGGTTCTATAAGACATTATGGCTTGAATGGTGATGTGAATAGTGTGTTACTGATAGCTGATATTGTCCTATATGGTTCTGCTCAAGATGTACAGGGTTTTCCTCCATTATTAATCAGAGCAATGACTTTTGAAATCCCTGTCATTGCACCTGATTTTCCCGTGTTAAGAAAATATATTGATGATGGGGTTCATGGGGTTTTTTATTCTAAACACAATCCTGAAGCTTTGATGAATGCTTTTTCGCTTTTGCTTTCAAGTGGAAGACTTTCTAAATTTGCTCAAGCTATTGGATCATCTGGAAGACAATTTGCTAAAAATGTGCTTGCTTTGGATTGCATAACTGGCTATGCAAGACTTCTGGAGAATGTACTAAGTTTTCCTTCAGATTCTTTACTACCTGGTCCTGTTTCTCAAATCCAACAAGTAGCATGGGGATGGAGTTTTTTCCAGAATGAAATAGAACTAGATATTGACTTGCTAAAAATGGATGATGATTTTTCTAATGGAAAAGCTACCGTTGTCAATGCCGTTGAGAAAGAGTTGGCTAGTCTTAATTATTCAACAAACTTCCTTGAGAATGGAACAGATGTTCCAATACAAGACGAACTGACCAAATTGGACTGGGACATTCTTAGAGAAATTGAAATTTCTGAAGAAAGTGAAATGCTCGAAATGGAACAGGTTGAAGAGAGGTTGGAGAAAGATGTTGGTGTTTGGGATGAGATATATCGTAATGCTAGGAAATCTGAGAAACTGAAGTTTGAAGCCAATGAGCGGGATGAAGGGGAGCTTGAGAGAACAGGACAACCTGTGTGCATTTATGAGATATACGGTGGTGCTGGAGTGTGGCCATTTTTGCACCATGGATCTTTATATCGTGGGTTAAGCCTTTCTAGAAGATCCCAAAGACAAAGCTCTGATGATGTGGATGCTGTTGGTCGTTTGCCTCTTCTGAATGACACATATTACCGTGACATTCTCTGTGAAATGGGAGGAATGTTTGCAATTGCAAATAGAGTGGATAGTATTCACAGGAGGCCTTGGATTGGGTTTCAGTCATGGCGTGCTGCTGGTAGGAAGGTAGCATTGTCAGTGGAAGCTGAAAGGGTTTTGGAAGAGACAATGCATGAGAATGCTAGAGGGGATGTAATATATTTTTGGGGACGCTTGGACCTGGACGGGGGTGCCATAGGAAGCAACAATGCACTTACTTTTTGGTCAATGTGTGATATCTTAAATGGAGGGAACTGCAGGAATGTTTTTCAAGATAGCTTCCGCCAGATGTATTCATTGCCCCCCCATGCTGAAGCGCTGCCCCCTATGCCTGAAGATGGTGGTTATTGGTCAGCACTGCACAGTTGGGTGATGCCAACCCCTTCTTTCCTGGAGTTCATAATGTTCTCTCGGATGTTCGTTGATTCCATTGATGCTTTTCACAGAGACTCTGGTAAATACAGCATGTGCTTGTTAGGCTCTTCAGAGATTGAGGAAAAACACTGTTACTGTCGAATGTTGGAACTTCTTATCAATGTATGGGCTTATCATAGTTCACGAAAGATGGTATATATAAATCCTAATACTGGCTCTTTGGAAGAGCAGCACCTAGTGGAACAACGGAAGAGTTTCATGTGGGCAAAATATTTCAATTTTTCATTGTTAAAAAGTATGGATGAAGATCTAGCTGAAGCTGCAGATGATGGTGACGATCCAAGGGATAAGTGGTTGTGGCCAATGACAGGAGAGGTGCACTGGCAAGGGATTTATGAAAGGGAGAGGGAAGAAAGGTACAGAATAAAAATGGATAAAAAAAGAAAAACAAAAGAGAAACTATACGAAAGGATGAAGTATGGTTACAAGCAGAAATCACTTGGACTATAA
Protein sequence

>Msa0035390

MGLSRTSSSQPEIDDTGGTDVAFSSIRGRFPFKRNPSHHRQKSLSSDRQLPRSSTRSHLHNRFSRKSLLSLFPKSGFYALIFAVVFLFAFASMVMQSSITSVFRQRNERGRNLREGLEFGSTLKFVPGKVSQRFLSGDGLDRLRVQPRIGILGHMTVDPQSLMLVTVIQNLQKLGYVFKIFGVGRGNARSIWENIGGGLSPFSTEQQGQIDWSNFEGIIVDSLEAKEAISSLMQEPFCSVPLIWIIQEDSLSNRLPVYKQMGWQHLISHWRSAFSRASVIVFPDFTYPMLYSELDTGNFFVIPGSPVDVWSAESYSKTHTKDQLRELSGFGKNDMVVLVVGSSIFYDDLSWEYAVAMNSIGPLLTKYARRNDAAESFKFVFLCGNSTDGYDDALQEVASRLGLPHGSIRHYGLNGDVNSVLLIADIVLYGSAQDVQGFPPLLIRAMTFEIPVIAPDFPVLRKYIDDGVHGVFYSKHNPEALMNAFSLLLSSGRLSKFAQAIGSSGRQFAKNVLALDCITGYARLLENVLSFPSDSLLPGPVSQIQQVAWGWSFFQNEIELDIDLLKMDDDFSNGKATVVNAVEKELASLNYSTNFLENGTDVPIQDELTKLDWDILREIEISEESEMLEMEQVEERLEKDVGVWDEIYRNARKSEKLKFEANERDEGELERTGQPVCIYEIYGGAGVWPFLHHGSLYRGLSLSRRSQRQSSDDVDAVGRLPLLNDTYYRDILCEMGGMFAIANRVDSIHRRPWIGFQSWRAAGRKVALSVEAERVLEETMHENARGDVIYFWGRLDLDGGAIGSNNALTFWSMCDILNGGNCRNVFQDSFRQMYSLPPHAEALPPMPEDGGYWSALHSWVMPTPSFLEFIMFSRMFVDSIDAFHRDSGKYSMCLLGSSEIEEKHCYCRMLELLINVWAYHSSRKMVYINPNTGSLEEQHLVEQRKSFMWAKYFNFSLLKSMDEDLAEAADDGDDPRDKWLWPMTGEVHWQGIYEREREERYRIKMDKKRKTKEKLYERMKYGYKQKSLGL*