Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1245440 | XP_003628144.2 | 98.554 | 1176 | 17 | 0 | 2 | 1177 | 1 | 1176 | 0.0 | 2407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1245440 | sp|P98204|ALA1_ARATH | 69.576 | 1157 | 332 | 7 | 22 | 1177 | 20 | 1157 | 0.0 | 1700 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002680 | Msa1245440 | 0.800095 | 1.692340e-48 | -8.615850e-47 |
| Msa0028620 | Msa1245440 | 0.816598 | 5.092358e-52 | -8.615850e-47 |
| Msa0035390 | Msa1245440 | 0.806560 | 7.752508e-50 | -8.615850e-47 |
| Msa0053860 | Msa1245440 | 0.824933 | 6.169618e-54 | -8.615850e-47 |
| Msa0056450 | Msa1245440 | 0.806461 | 8.136405e-50 | -8.615850e-47 |
| Msa0065680 | Msa1245440 | -0.804986 | 1.660144e-49 | -8.615850e-47 |
| Msa0089730 | Msa1245440 | 0.802826 | 4.666496e-49 | -8.615850e-47 |
| Msa0089980 | Msa1245440 | 0.819774 | 9.732784e-53 | -8.615850e-47 |
| Msa0090010 | Msa1245440 | 0.816187 | 6.292154e-52 | -8.615850e-47 |
| Msa0101860 | Msa1245440 | 0.824442 | 8.052614e-54 | -8.615850e-47 |
| Msa0104670 | Msa1245440 | 0.810430 | 1.157252e-50 | -8.615850e-47 |
| Msa0105410 | Msa1245440 | 0.804262 | 2.350800e-49 | -8.615850e-47 |
| Msa0108390 | Msa1245440 | 0.804632 | 1.968215e-49 | -8.615850e-47 |
| Msa0108410 | Msa1245440 | 0.810353 | 1.202095e-50 | -8.615850e-47 |
| Msa0116790 | Msa1245440 | 0.804045 | 2.608175e-49 | -8.615850e-47 |
| Msa0607320 | Msa1245440 | 0.839638 | 1.405468e-57 | -8.615850e-47 |
| Msa0656000 | Msa1245440 | 0.816204 | 6.237389e-52 | -8.615850e-47 |
| Msa0661320 | Msa1245440 | 0.812246 | 4.668127e-51 | -8.615850e-47 |
| Msa0698100 | Msa1245440 | 0.814036 | 1.889963e-51 | -8.615850e-47 |
| Msa0702720 | Msa1245440 | 0.818110 | 2.325026e-52 | -8.615850e-47 |
| Msa0709270 | Msa1245440 | 0.814145 | 1.788707e-51 | -8.615850e-47 |
| Msa0733010 | Msa1245440 | 0.807835 | 4.163610e-50 | -8.615850e-47 |
| Msa0738340 | Msa1245440 | 0.804108 | 2.530685e-49 | -8.615850e-47 |
| Msa0743930 | Msa1245440 | 0.827200 | 1.784223e-54 | -8.615850e-47 |
| Msa0763920 | Msa1245440 | 0.808662 | 2.774072e-50 | -8.615850e-47 |
| Msa0772280 | Msa1245440 | 0.837333 | 5.530170e-57 | -8.615850e-47 |
| Msa0784960 | Msa1245440 | 0.849728 | 2.684176e-60 | -8.615850e-47 |
| Msa0797770 | Msa1245440 | 0.810501 | 1.117189e-50 | -8.615850e-47 |
| Msa0816130 | Msa1245440 | 0.808614 | 2.840149e-50 | -8.615850e-47 |
| Msa0817460 | Msa1245440 | 0.801532 | 8.615234e-49 | -8.615850e-47 |
| Msa0833530 | Msa1245440 | 0.823961 | 1.044932e-53 | -8.615850e-47 |
| Msa0835230 | Msa1245440 | 0.809182 | 2.146937e-50 | -8.615850e-47 |
| Msa0126790 | Msa1245440 | 0.805269 | 1.448246e-49 | -8.615850e-47 |
| Msa0141400 | Msa1245440 | 0.814818 | 1.269132e-51 | -8.615850e-47 |
| Msa0152560 | Msa1245440 | 0.803045 | 4.203917e-49 | -8.615850e-47 |
| Msa0171870 | Msa1245440 | 0.800770 | 1.233025e-48 | -8.615850e-47 |
| Msa0183760 | Msa1245440 | 0.806782 | 6.960414e-50 | -8.615850e-47 |
| Msa0225220 | Msa1245440 | 0.809471 | 1.861912e-50 | -8.615850e-47 |
| Msa0232020 | Msa1245440 | 0.804736 | 1.871769e-49 | -8.615850e-47 |
| Msa1226460 | Msa1245440 | 0.815693 | 8.110311e-52 | -8.615850e-47 |
| Msa1238660 | Msa1245440 | 0.809896 | 1.508636e-50 | -8.615850e-47 |
| Msa1245440 | Msa1259860 | 0.826929 | 2.071049e-54 | -8.615850e-47 |
| Msa1245440 | Msa1284900 | 0.816250 | 6.091416e-52 | -8.615850e-47 |
| Msa1245440 | Msa1319560 | 0.841637 | 4.210201e-58 | -8.615850e-47 |
| Msa1245440 | Msa1340200 | 0.822406 | 2.409535e-53 | -8.615850e-47 |
| Msa1245440 | Msa1341840 | 0.819739 | 9.915022e-53 | -8.615850e-47 |
| Msa1245440 | Msa1347890 | 0.810917 | 9.081584e-51 | -8.615850e-47 |
| Msa1245440 | Msa1358240 | 0.816099 | 6.584128e-52 | -8.615850e-47 |
| Msa1245440 | Msa1440900 | 0.809511 | 1.825183e-50 | -8.615850e-47 |
| Msa1245440 | Msa1442920 | 0.827536 | 1.481791e-54 | -8.615850e-47 |
| Msa1245440 | Msa1456190 | 0.814612 | 1.410068e-51 | -8.615850e-47 |
| Msa1245440 | Msa1458340 | 0.804523 | 2.073939e-49 | -8.615850e-47 |
| Msa1245440 | Msa1458680 | 0.838546 | 2.696255e-57 | -8.615850e-47 |
| Msa1245440 | Msa1461370 | 0.819303 | 1.246537e-52 | -8.615850e-47 |
| Msa0395980 | Msa1245440 | 0.809813 | 1.571614e-50 | -8.615850e-47 |
| Msa0403640 | Msa1245440 | 0.805374 | 1.376855e-49 | -8.615850e-47 |
| Msa0403660 | Msa1245440 | 0.802224 | 6.210124e-49 | -8.615850e-47 |
| Msa0418630 | Msa1245440 | 0.809109 | 2.226130e-50 | -8.615850e-47 |
| Msa0432160 | Msa1245440 | 0.812927 | 3.314458e-51 | -8.615850e-47 |
| Msa0432670 | Msa1245440 | 0.810293 | 1.238725e-50 | -8.615850e-47 |
| Msa0438600 | Msa1245440 | 0.812901 | 3.357965e-51 | -8.615850e-47 |
| Msa0476680 | Msa1245440 | 0.822269 | 2.592504e-53 | -8.615850e-47 |
| Msa0999680 | Msa1245440 | 0.826003 | 3.442643e-54 | -8.615850e-47 |
| Msa1002960 | Msa1245440 | 0.809977 | 1.449141e-50 | -8.615850e-47 |
| Msa1011090 | Msa1245440 | 0.805284 | 1.437728e-49 | -8.615850e-47 |
| Msa1028280 | Msa1245440 | 0.803608 | 3.214475e-49 | -8.615850e-47 |
| Msa1034500 | Msa1245440 | 0.834327 | 3.195327e-56 | -8.615850e-47 |
| Msa1089450 | Msa1245440 | 0.804278 | 2.332642e-49 | -8.615850e-47 |
| Msa0240900 | Msa1245440 | 0.806246 | 9.027352e-50 | -8.615850e-47 |
| Msa0287870 | Msa1245440 | 0.834070 | 3.706157e-56 | -8.615850e-47 |
| Msa0305840 | Msa1245440 | 0.820655 | 6.116980e-53 | -8.615850e-47 |
| Msa0317970 | Msa1245440 | 0.803662 | 3.132376e-49 | -8.615850e-47 |
| Msa0339910 | Msa1245440 | 0.800515 | 1.390323e-48 | -8.615850e-47 |
| Msa0340340 | Msa1245440 | 0.803433 | 3.494681e-49 | -8.615850e-47 |
| Msa0342010 | Msa1245440 | 0.815002 | 1.155387e-51 | -8.615850e-47 |
| Msa0361330 | Msa1245440 | 0.811206 | 7.862558e-51 | -8.615850e-47 |
| Msa0362890 | Msa1245440 | 0.808120 | 3.619392e-50 | -8.615850e-47 |
| Msa1111290 | Msa1245440 | 0.809702 | 1.660269e-50 | -8.615850e-47 |
| Msa1111380 | Msa1245440 | 0.840038 | 1.106216e-57 | -8.615850e-47 |
| Msa1114780 | Msa1245440 | 0.819648 | 1.039926e-52 | -8.615850e-47 |
| Msa1161810 | Msa1245440 | 0.824886 | 6.328783e-54 | -8.615850e-47 |
| Msa1176370 | Msa1245440 | 0.816998 | 4.142173e-52 | -8.615850e-47 |
| Msa0521010 | Msa1245440 | 0.818263 | 2.147573e-52 | -8.615850e-47 |
| Msa0553200 | Msa1245440 | 0.822611 | 2.159863e-53 | -8.615850e-47 |
| Msa0573180 | Msa1245440 | 0.817215 | 3.701536e-52 | -8.615850e-47 |
| Msa0575320 | Msa1245440 | 0.810629 | 1.048375e-50 | -8.615850e-47 |
| Msa0846860 | Msa1245440 | 0.820479 | 6.713732e-53 | -8.615850e-47 |
| Msa0867010 | Msa1245440 | 0.807226 | 5.604950e-50 | -8.615850e-47 |
| Msa0867870 | Msa1245440 | 0.803152 | 3.995760e-49 | -8.615850e-47 |
| Msa0868160 | Msa1245440 | 0.811808 | 5.816616e-51 | -8.615850e-47 |
| Msa0894710 | Msa1245440 | 0.803152 | 3.995253e-49 | -8.615850e-47 |
| Msa0899970 | Msa1245440 | 0.815376 | 9.543642e-52 | -8.615850e-47 |
| Msa0965080 | Msa1245440 | 0.828755 | 7.534717e-55 | -8.615850e-47 |
| Msa0965290 | Msa1245440 | 0.824288 | 8.753881e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1245440 | MtrunA17_Chr8g0355251 | 98.554 | 1176 | 17 | 0 | 2 | 1177 | 1 | 1176 | 0.0 | 2407 |
| Msa1245440 | MtrunA17_Chr3g0078371 | 77.481 | 1159 | 237 | 7 | 22 | 1176 | 73 | 1211 | 0.0 | 1831 |
| Msa1245440 | MtrunA17_Chr7g0244991 | 58.311 | 1137 | 429 | 10 | 65 | 1160 | 137 | 1269 | 0.0 | 1310 |
| Msa1245440 | MtrunA17_Chr8g0363911 | 37.148 | 1171 | 652 | 24 | 53 | 1174 | 26 | 1161 | 0.0 | 707 |
| Msa1245440 | MtrunA17_Chr5g0415271 | 36.796 | 1136 | 639 | 19 | 71 | 1158 | 24 | 1128 | 0.0 | 704 |
| Msa1245440 | MtrunA17_Chr6g0450601 | 37.413 | 1144 | 646 | 23 | 70 | 1157 | 37 | 1166 | 0.0 | 691 |
| Msa1245440 | MtrunA17_Chr8g0368691 | 36.446 | 1103 | 642 | 19 | 87 | 1144 | 67 | 1155 | 0.0 | 681 |
| Msa1245440 | MtrunA17_Chr4g0062251 | 37.209 | 1075 | 615 | 20 | 70 | 1101 | 38 | 1095 | 0.0 | 679 |
| Msa1245440 | MtrunA17_Chr2g0329991 | 36.222 | 1154 | 649 | 25 | 70 | 1157 | 40 | 1172 | 0.0 | 679 |
| Msa1245440 | MtrunA17_Chr8g0342811 | 35.314 | 1161 | 652 | 28 | 70 | 1158 | 40 | 1173 | 0.0 | 661 |
| Msa1245440 | MtrunA17_Chr3g0091611 | 36.511 | 1112 | 642 | 23 | 79 | 1144 | 41 | 1134 | 0.0 | 657 |
| Msa1245440 | MtrunA17_Chr0c05g0492131 | 35.708 | 1123 | 628 | 25 | 70 | 1131 | 33 | 1122 | 0.0 | 632 |
| Msa1245440 | MtrunA17_Chr2g0324791 | 33.069 | 1134 | 653 | 25 | 71 | 1176 | 3 | 1058 | 0.0 | 563 |
| Msa1245440 | MtrunA17_Chr1g0173111 | 22.285 | 534 | 248 | 18 | 387 | 900 | 389 | 775 | 8.45e-17 | 86.3 |
| Msa1245440 | MtrunA17_Chr8g0346461 | 25.714 | 350 | 205 | 11 | 442 | 767 | 352 | 670 | 2.96e-11 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1245440 | AT5G04930.1 | 69.576 | 1157 | 332 | 7 | 22 | 1177 | 20 | 1157 | 0.0 | 1700 |
| Msa1245440 | AT3G27870.1 | 38.488 | 1151 | 617 | 27 | 70 | 1158 | 37 | 1158 | 0.0 | 716 |
| Msa1245440 | AT1G59820.1 | 35.906 | 1192 | 676 | 21 | 23 | 1176 | 11 | 1152 | 0.0 | 711 |
| Msa1245440 | AT3G13900.1 | 36.915 | 1154 | 640 | 21 | 71 | 1156 | 41 | 1174 | 0.0 | 696 |
| Msa1245440 | AT3G25610.1 | 37.288 | 1121 | 639 | 24 | 70 | 1144 | 39 | 1141 | 0.0 | 689 |
| Msa1245440 | AT1G17500.2 | 36.924 | 1151 | 641 | 30 | 70 | 1161 | 40 | 1164 | 0.0 | 688 |
| Msa1245440 | AT1G17500.1 | 36.924 | 1151 | 641 | 30 | 70 | 1161 | 40 | 1164 | 0.0 | 688 |
| Msa1245440 | AT1G54280.2 | 36.810 | 1160 | 635 | 26 | 71 | 1156 | 41 | 1176 | 0.0 | 686 |
| Msa1245440 | AT1G54280.3 | 36.810 | 1160 | 635 | 26 | 71 | 1156 | 41 | 1176 | 0.0 | 686 |
| Msa1245440 | AT1G54280.1 | 36.810 | 1160 | 635 | 26 | 71 | 1156 | 41 | 1176 | 0.0 | 686 |
| Msa1245440 | AT1G68710.2 | 35.893 | 1120 | 659 | 20 | 70 | 1144 | 41 | 1146 | 0.0 | 686 |
| Msa1245440 | AT1G68710.1 | 35.893 | 1120 | 659 | 20 | 70 | 1144 | 41 | 1146 | 0.0 | 686 |
| Msa1245440 | AT1G72700.1 | 36.606 | 1161 | 646 | 30 | 70 | 1165 | 40 | 1175 | 0.0 | 683 |
| Msa1245440 | AT1G72700.3 | 36.606 | 1161 | 646 | 30 | 70 | 1165 | 40 | 1175 | 0.0 | 683 |
| Msa1245440 | AT1G72700.2 | 36.606 | 1161 | 646 | 30 | 70 | 1165 | 40 | 1175 | 0.0 | 683 |
| Msa1245440 | AT1G26130.1 | 36.428 | 1131 | 634 | 24 | 70 | 1144 | 41 | 1142 | 0.0 | 681 |
| Msa1245440 | AT1G26130.2 | 36.396 | 1132 | 634 | 25 | 70 | 1144 | 41 | 1143 | 0.0 | 678 |
| Msa1245440 | AT1G26130.4 | 36.396 | 1132 | 634 | 25 | 70 | 1144 | 41 | 1143 | 0.0 | 678 |
| Msa1245440 | AT1G26130.3 | 36.396 | 1132 | 634 | 25 | 70 | 1144 | 41 | 1143 | 0.0 | 678 |
| Msa1245440 | AT1G68710.3 | 35.166 | 1146 | 658 | 21 | 70 | 1144 | 41 | 1172 | 0.0 | 674 |
| Msa1245440 | AT3G27870.2 | 40.452 | 974 | 513 | 20 | 70 | 1000 | 37 | 986 | 0.0 | 661 |
| Msa1245440 | AT1G13210.1 | 35.911 | 1125 | 652 | 25 | 70 | 1144 | 37 | 1142 | 0.0 | 659 |
| Msa1245440 | AT3G27870.3 | 38.004 | 992 | 533 | 24 | 224 | 1158 | 1 | 967 | 0.0 | 595 |
| Msa1245440 | AT3G13900.2 | 38.519 | 932 | 500 | 16 | 71 | 945 | 41 | 956 | 0.0 | 593 |
| Msa1245440 | AT5G44240.2 | 33.455 | 1094 | 650 | 18 | 71 | 1155 | 3 | 1027 | 0.0 | 571 |
| Msa1245440 | AT5G44240.1 | 33.455 | 1094 | 650 | 18 | 71 | 1155 | 35 | 1059 | 0.0 | 570 |
| Msa1245440 | AT3G13900.3 | 36.797 | 924 | 504 | 17 | 71 | 941 | 41 | 937 | 3.05e-175 | 543 |
Find 255 sgRNAs with CRISPR-Local
Find 400 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAATATCAATGAAGATTT+AGG | 0.134302 | 8_2:-35542188 | Msa1245440:CDS |
| GACTATTTCGATAGTTATTT+TGG | 0.183975 | 8_2:-35539480 | Msa1245440:CDS |
| CTACAGAGTCCTCAGCTTTA+TGG | 0.189123 | 8_2:-35539650 | Msa1245440:CDS |
| TTCTTCTTTCACTCTGTCTT+TGG | 0.199217 | 8_2:-35543743 | Msa1245440:five_prime_UTR |
| AGTTTCAATGCGCTAGTATT+TGG | 0.205298 | 8_2:-35542109 | Msa1245440:CDS |
| TGTTCCTCTCTTTGCATATT+GGG | 0.205345 | 8_2:-35539540 | Msa1245440:CDS |
| CCCTTTGATCCATATCTTAC+AGG | 0.214010 | 8_2:+35543388 | None:intergenic |
| ATTACCTTATTATAGGAAAT+TGG | 0.214718 | 8_2:-35542426 | Msa1245440:CDS |
| TGAATCGATTACCTTATTAT+AGG | 0.220322 | 8_2:-35542433 | Msa1245440:CDS |
| GTTCTTGTATTTATAAAATT+AGG | 0.226742 | 8_2:-35538139 | Msa1245440:three_prime_UTR |
| GTGAGAGATGCTTGTGAATT+TGG | 0.230511 | 8_2:+35543913 | None:intergenic |
| GATTTCTCATGCATCCATTT+GGG | 0.234204 | 8_2:-35539417 | Msa1245440:CDS |
| GAAAAGAATGTCTGTTATAT+TGG | 0.236706 | 8_2:-35541259 | Msa1245440:CDS |
| GTTTCAATGCGCTAGTATTT+GGG | 0.239935 | 8_2:-35542108 | Msa1245440:CDS |
| GATATCCTTGTACATTTCTA+TGG | 0.241630 | 8_2:-35542300 | Msa1245440:CDS |
| AATCTCTCATTTGTTCTATC+AGG | 0.248475 | 8_2:+35543286 | None:intergenic |
| CACTGTAGATATAGCAAGTA+TGG | 0.259906 | 8_2:-35539513 | Msa1245440:CDS |
| GAGGAAAGTTATCAATATTA+TGG | 0.260563 | 8_2:-35542386 | Msa1245440:CDS |
| TTGTTCCTCTCTTTGCATAT+TGG | 0.261562 | 8_2:-35539541 | Msa1245440:CDS |
| TTGACAAGGATCTTAGTAAA+AGG | 0.262036 | 8_2:-35539679 | Msa1245440:CDS |
| AGAAAATAACCTATGCATAT+TGG | 0.269137 | 8_2:-35540971 | Msa1245440:CDS |
| TAGGAATATATATGGATTTC+AGG | 0.274349 | 8_2:-35542735 | Msa1245440:CDS |
| TAGTACTAAAACATTTATTA+AGG | 0.277021 | 8_2:+35543589 | None:intergenic |
| GGAAAGCCGGTATTAAAGTA+TGG | 0.277372 | 8_2:-35540888 | Msa1245440:CDS |
| CTATGCAGGTTCAATGTCTT+GGG | 0.277909 | 8_2:-35541306 | Msa1245440:intron |
| AATGAGAGATTTGAATTTGC+AGG | 0.278596 | 8_2:-35543274 | Msa1245440:CDS |
| TGTAAAGTTATTCATTCTTT+AGG | 0.285816 | 8_2:-35538259 | Msa1245440:three_prime_UTR |
| TTTAGTACTAGAACAAATTA+TGG | 0.286657 | 8_2:-35543576 | Msa1245440:five_prime_UTR |
| TCTTTGTGCTAATTCTGTTT+TGG | 0.290282 | 8_2:-35539997 | Msa1245440:intron |
| AAATCCAATTTCCTATAATA+AGG | 0.292418 | 8_2:+35542422 | None:intergenic |
| TACAGAGTCCTCAGCTTTAT+GGG | 0.300068 | 8_2:-35539649 | Msa1245440:CDS |
| AAAAGAATGTCTGTTATATT+GGG | 0.301829 | 8_2:-35541258 | Msa1245440:CDS |
| GGATTTCTCATGCATCCATT+TGG | 0.302390 | 8_2:-35539418 | Msa1245440:CDS |
| CACATAATGATTGATATTCT+TGG | 0.309887 | 8_2:-35541586 | Msa1245440:CDS |
| TCAACTAGGGAAGTCACTTT+TGG | 0.326432 | 8_2:-35543427 | Msa1245440:CDS |
| TGAATATCAATGAAGATTTA+GGG | 0.327800 | 8_2:-35542187 | Msa1245440:CDS |
| CAATAGGTTAGGATTGGTTT+TGG | 0.334033 | 8_2:-35543011 | Msa1245440:CDS |
| TGGCAAGCACCACATTATTC+TGG | 0.338022 | 8_2:-35538503 | Msa1245440:CDS |
| GAAAATAACCTATGCATATT+GGG | 0.338089 | 8_2:-35540970 | Msa1245440:CDS |
| TACCATCACTTCATGGTTAC+TGG | 0.339835 | 8_2:-35539349 | Msa1245440:intron |
| TCGAGAAGTTTGAGAATAGA+AGG | 0.341274 | 8_2:-35538377 | Msa1245440:CDS |
| GGTTTGAGGACGCTTGTTAT+TGG | 0.342303 | 8_2:-35541105 | Msa1245440:CDS |
| TTATTCTGGTTATGTTTGTT+TGG | 0.343657 | 8_2:-35538489 | Msa1245440:CDS |
| AAACCGAATAGGAATATATA+TGG | 0.343990 | 8_2:-35542743 | Msa1245440:CDS |
| GATTAAGTATAGCAATTATA+AGG | 0.352400 | 8_2:+35543161 | None:intergenic |
| ATAGAAATGTACAAGGATAT+CGG | 0.355230 | 8_2:+35542302 | None:intergenic |
| GTCATTTCATAGAGAAGAAA+TGG | 0.355531 | 8_2:-35542982 | Msa1245440:CDS |
| CCTATGGCGTTGATTATTGA+TGG | 0.358296 | 8_2:-35540652 | Msa1245440:CDS |
| CAGATAAAGTTGAGAACAAT+AGG | 0.358646 | 8_2:-35543027 | Msa1245440:CDS |
| AATCCATATATATTCCTATT+CGG | 0.359921 | 8_2:+35542740 | None:intergenic |
| CTTAGAGACTCAATAGCTTC+TGG | 0.360179 | 8_2:+35540910 | None:intergenic |
| TCCTCGAATATTGTACTTAG+AGG | 0.362052 | 8_2:-35542674 | Msa1245440:CDS |
| GTTTGAGGACGCTTGTTATT+GGG | 0.362402 | 8_2:-35541104 | Msa1245440:CDS |
| CAACACTAGTGTTATCTTTG+TGG | 0.362784 | 8_2:+35538312 | None:intergenic |
| GTCGTGTAGAAGACGTTTAC+AGG | 0.364160 | 8_2:-35540761 | Msa1245440:CDS |
| GCTATGCAGGTTCAATGTCT+TGG | 0.366620 | 8_2:-35541307 | Msa1245440:intron |
| AAAGGGTAGCTTTGGAGAAA+TGG | 0.374344 | 8_2:+35543845 | None:intergenic |
| GTGAAAGGTGGTAGAAGAAA+AGG | 0.376860 | 8_2:+35543827 | None:intergenic |
| CTTCAGTTTGTGCTGCTGTT+TGG | 0.377271 | 8_2:-35542478 | Msa1245440:CDS |
| TGACGAGTAGCCAATTGATA+TGG | 0.383546 | 8_2:+35540837 | None:intergenic |
| ATTTGAATTTGCAGGGAATT+CGG | 0.386310 | 8_2:-35543266 | Msa1245440:CDS |
| TATGTCAACGCTTGTTCATC+TGG | 0.387878 | 8_2:+35541655 | None:intergenic |
| CTTATTCTTCTGTGGGTTTG+AGG | 0.389069 | 8_2:-35541119 | Msa1245440:CDS |
| CACGAAAAGGAGAGGTTTAG+TGG | 0.390088 | 8_2:-35542782 | Msa1245440:CDS |
| TGATCCATATCTTACAGGTT+TGG | 0.394759 | 8_2:+35543393 | None:intergenic |
| TAAATCTTCATTGATATTCA+AGG | 0.394762 | 8_2:+35542190 | None:intergenic |
| CAAACCCAGAAGTTCAAATC+TGG | 0.395330 | 8_2:+35543785 | None:intergenic |
| GATGCTATACCATCACTTCA+TGG | 0.395891 | 8_2:-35539356 | Msa1245440:CDS |
| GAGTCCAAACCTGTAAGATA+TGG | 0.399018 | 8_2:-35543397 | Msa1245440:CDS |
| TGGGGTTGGCATCAGTGGTC+AGG | 0.401702 | 8_2:-35540158 | Msa1245440:CDS |
| CAGAAGCTATTGAGTCTCTA+AGG | 0.403410 | 8_2:-35540909 | Msa1245440:CDS |
| CTTCACTCTTATTCTTCTGT+GGG | 0.407311 | 8_2:-35541126 | Msa1245440:CDS |
| CAAGAAACTGCCATATCAAT+TGG | 0.409612 | 8_2:-35540847 | Msa1245440:CDS |
| AACTTGCTCATTCTCAAGGC+TGG | 0.412722 | 8_2:+35542061 | None:intergenic |
| TCATCATCAAGAAGAAGTTC+TGG | 0.413308 | 8_2:-35543457 | Msa1245440:CDS |
| TGACGATAGCCGATACGTTA+TGG | 0.415621 | 8_2:-35539583 | Msa1245440:CDS |
| CAGAAGAATAAGAGTGAAGA+TGG | 0.418864 | 8_2:+35541130 | None:intergenic |
| GGAGCTTGTTCGTGTTGGTC+AGG | 0.421237 | 8_2:-35542279 | Msa1245440:CDS |
| GTTCAAACTCTTAATCTAGA+TGG | 0.424791 | 8_2:-35542857 | Msa1245440:CDS |
| CATCAGAATATTATTGATGT+TGG | 0.427133 | 8_2:-35538233 | Msa1245440:three_prime_UTR |
| GTAGAAGAAAAGGGTAGCTT+TGG | 0.427448 | 8_2:+35543837 | None:intergenic |
| CATGTCGGTTATAGTTTACC+AGG | 0.432869 | 8_2:-35542333 | Msa1245440:CDS |
| CAAGTACTTCTATGATTGGT+AGG | 0.433645 | 8_2:-35541026 | Msa1245440:CDS |
| CAAGTTGAATACTCTCTTCA+AGG | 0.436098 | 8_2:-35542044 | Msa1245440:intron |
| TCAATTTAAGTTTCACGAAA+AGG | 0.436590 | 8_2:-35542795 | Msa1245440:CDS |
| TTTGAGAATAGAAGGGTCAA+TGG | 0.436649 | 8_2:-35538369 | Msa1245440:CDS |
| AGTGGATTTGCAAGCAAAGA+TGG | 0.436723 | 8_2:-35541790 | Msa1245440:CDS |
| ACATATGCTGCCGCTGCCTA+TGG | 0.439035 | 8_2:-35541637 | Msa1245440:CDS |
| CAACCCCAACATCAGCCATT+TGG | 0.441854 | 8_2:+35540173 | None:intergenic |
| CAGGCTACAATGGAGGTTGA+TGG | 0.445940 | 8_2:-35542716 | Msa1245440:CDS |
| ATTGGGGTGCAATGACAATT+CGG | 0.449050 | 8_2:-35541241 | Msa1245440:CDS |
| TCTTCACTCTTATTCTTCTG+TGG | 0.450704 | 8_2:-35541127 | Msa1245440:CDS |
| AAAGTTGAGAACAATAGGTT+AGG | 0.450930 | 8_2:-35543022 | Msa1245440:CDS |
| ATGCTTCAGAATTTGATCAA+TGG | 0.454118 | 8_2:-35541068 | Msa1245440:CDS |
| ATTAAAGTATGGGTGTTGAC+TGG | 0.454694 | 8_2:-35540877 | Msa1245440:CDS |
| TGGATGTAATCAGGTGGACT+TGG | 0.459902 | 8_2:-35539439 | Msa1245440:CDS |
| CGATGTATCAATGATCCAAA+TGG | 0.463472 | 8_2:-35540188 | Msa1245440:CDS |
| CCTGTAAGATATGGATCAAA+GGG | 0.464998 | 8_2:-35543388 | Msa1245440:CDS |
| GGAGGGTAGGCAAGCTGTAA+TGG | 0.466999 | 8_2:-35540137 | Msa1245440:CDS |
| TCAATATAGTTGCCAACCTC+AGG | 0.470528 | 8_2:+35540703 | None:intergenic |
| ATATATTCTTGATAGTGAAC+TGG | 0.471039 | 8_2:-35540617 | Msa1245440:CDS |
| GTAGCTCCGTTGCAAAAGGC+TGG | 0.475516 | 8_2:-35540452 | Msa1245440:CDS |
| TGATCCAAATGGCTGATGTT+GGG | 0.475834 | 8_2:-35540177 | Msa1245440:CDS |
| GATAGAAAACAATGAAATCA+TGG | 0.476780 | 8_2:+35538207 | None:intergenic |
| GCAGCAAGTACTTCTATGAT+TGG | 0.480124 | 8_2:-35541030 | Msa1245440:CDS |
| TGAGAACAATAGGTTAGGAT+TGG | 0.482905 | 8_2:-35543017 | Msa1245440:CDS |
| TGAAAGGTGGTAGAAGAAAA+GGG | 0.483991 | 8_2:+35543828 | None:intergenic |
| TGGAGTTGTTTCAACTCCTA+TGG | 0.484075 | 8_2:-35540668 | Msa1245440:CDS |
| TTGTCTCTCTCGTAAAGAAT+AGG | 0.484493 | 8_2:-35540427 | Msa1245440:CDS |
| GATGTTGGGGTTGGCATCAG+TGG | 0.487356 | 8_2:-35540163 | Msa1245440:CDS |
| AGTCCTCAGCTTTATGGGGC+TGG | 0.487402 | 8_2:-35539644 | Msa1245440:CDS |
| GCAGGGAATTCGGTTCGGAC+CGG | 0.488633 | 8_2:-35543256 | Msa1245440:CDS |
| GGTCAATTTGCACTTGGCCA+TGG | 0.490285 | 8_2:-35539459 | Msa1245440:CDS |
| GACGCTTGTTATTGGGATGC+GGG | 0.490460 | 8_2:-35541097 | Msa1245440:CDS |
| TTGCAAGCAAAGATGGAAAA+CGG | 0.491112 | 8_2:-35541783 | Msa1245440:CDS |
| TCCTCTAAGTACAATATTCG+AGG | 0.493160 | 8_2:+35542673 | None:intergenic |
| ATAAAGAAGTAGAAGCAAGT+TGG | 0.494242 | 8_2:+35543891 | None:intergenic |
| AAAGTTATCAATATTATGGA+TGG | 0.497507 | 8_2:-35542382 | Msa1245440:CDS |
| GAGGTTGGCAACTATATTGA+AGG | 0.497643 | 8_2:-35540700 | Msa1245440:CDS |
| AAGATGCATATGAGGATTGG+AGG | 0.498020 | 8_2:-35543060 | Msa1245440:CDS |
| TAGAAATGTACAAGGATATC+GGG | 0.498250 | 8_2:+35542303 | None:intergenic |
| TTACGATTTCTTTCTTGCAC+TGG | 0.499106 | 8_2:-35541758 | Msa1245440:CDS |
| AAAATGGCAACAACAATAGT+TGG | 0.499937 | 8_2:+35539701 | None:intergenic |
| GTTCCTCTCTTTGCATATTG+GGG | 0.500684 | 8_2:-35539539 | Msa1245440:CDS |
| AATCTATCAGCTTGACTGTA+GGG | 0.500945 | 8_2:+35541692 | None:intergenic |
| CGAATTCAAGATTTCAGTGT+AGG | 0.501122 | 8_2:-35542214 | Msa1245440:CDS |
| GGACGCTTGTTATTGGGATG+CGG | 0.502399 | 8_2:-35541098 | Msa1245440:CDS |
| GGTTGGCATCAGTGGTCAGG+AGG | 0.503044 | 8_2:-35540155 | Msa1245440:CDS |
| TCTTATTTGTACACGGACAC+TGG | 0.506057 | 8_2:-35540072 | Msa1245440:CDS |
| AGAATCTTTGATCATGAAGT+AGG | 0.508208 | 8_2:+35542256 | None:intergenic |
| CGCAACTTTCATATGTGTCA+TGG | 0.509300 | 8_2:-35539384 | Msa1245440:CDS |
| AATTTGCAGGGAATTCGGTT+CGG | 0.509635 | 8_2:-35543261 | Msa1245440:CDS |
| CAACACCCATACTTTAATAC+CGG | 0.510191 | 8_2:+35540882 | None:intergenic |
| TCGAGTAGCTCCGTTGCAAA+AGG | 0.511123 | 8_2:-35540456 | Msa1245440:CDS |
| ACTTGGCCATGGATGTAATC+AGG | 0.511345 | 8_2:-35539448 | Msa1245440:CDS |
| TTAAAGTATGGGTGTTGACT+GGG | 0.511818 | 8_2:-35540876 | Msa1245440:CDS |
| AACTTTGAAGAATTCTCAGA+TGG | 0.512471 | 8_2:+35543499 | None:intergenic |
| CCGACATGAGGAATGTGAAA+AGG | 0.513314 | 8_2:+35542348 | None:intergenic |
| ACCTGTAAGATATGGATCAA+AGG | 0.514913 | 8_2:-35543389 | Msa1245440:CDS |
| ATTTCTCATGCATCCATTTG+GGG | 0.515709 | 8_2:-35539416 | Msa1245440:CDS |
| ATGAGAGATTTGAATTTGCA+GGG | 0.516205 | 8_2:-35543273 | Msa1245440:CDS |
| CTTGAAATCTGAATATCGTC+GGG | 0.518724 | 8_2:+35538405 | None:intergenic |
| TATATTGAAGGAAGTTCTGA+TGG | 0.519157 | 8_2:-35540688 | Msa1245440:CDS |
| ATGCTTATAGAGCGAACCTC+AGG | 0.520554 | 8_2:-35541610 | Msa1245440:CDS |
| TGCTGTGAAAGATGCATATG+AGG | 0.524329 | 8_2:-35543068 | Msa1245440:CDS |
| AAAACAAAATCACAAGGAAT+CGG | 0.524501 | 8_2:+35542914 | None:intergenic |
| TGACAACAGCTATAAATGAA+TGG | 0.524690 | 8_2:-35539760 | Msa1245440:CDS |
| TGCATGAATTTGATAGTGAT+CGG | 0.526715 | 8_2:-35541281 | Msa1245440:CDS |
| AATGTAGCTGCACCTGAGGT+TGG | 0.530978 | 8_2:-35540715 | Msa1245440:CDS |
| TCTTGAAATCTGAATATCGT+CGG | 0.531604 | 8_2:+35538404 | None:intergenic |
| TGAAAGATGCATATGAGGAT+TGG | 0.536868 | 8_2:-35543063 | Msa1245440:CDS |
| TTAAGTGCGAGAAACCGAAT+AGG | 0.537373 | 8_2:-35542754 | Msa1245440:CDS |
| TCTATGGAGCTTGTTCGTGT+TGG | 0.538618 | 8_2:-35542284 | Msa1245440:CDS |
| GTCAAGCTGATAGATTATCA+AGG | 0.540142 | 8_2:-35541685 | Msa1245440:CDS |
| ATTGAATACAGACATAATAC+AGG | 0.540454 | 8_2:-35541163 | Msa1245440:CDS |
| CACTATCAAGAATATATACA+AGG | 0.541563 | 8_2:+35540623 | None:intergenic |
| AAATGGAAAGATATTAGAGT+TGG | 0.541680 | 8_2:-35542965 | Msa1245440:CDS |
| AACTGTTCAAACAAATTCCT+AGG | 0.542452 | 8_2:+35543208 | None:intergenic |
| AGAAGTACTTGCTGCCTCAA+AGG | 0.546382 | 8_2:+35541038 | None:intergenic |
| GTTGGCATCAGTGGTCAGGA+GGG | 0.546555 | 8_2:-35540154 | Msa1245440:CDS |
| TAGGGCTGCTTTGCTTCGCA+AGG | 0.549839 | 8_2:-35541007 | Msa1245440:CDS |
| ATCAAGAATATATACAAGGC+TGG | 0.550049 | 8_2:+35540627 | None:intergenic |
| TTGGACAGCACAATGGTCAA+TGG | 0.551043 | 8_2:+35543932 | None:intergenic |
| GTGAGTCTAATTTGAAGACT+AGG | 0.551484 | 8_2:-35542835 | Msa1245440:CDS |
| AAGTTATCAATATTATGGAT+GGG | 0.551657 | 8_2:-35542381 | Msa1245440:CDS |
| GAAAGCCGGTATTAAAGTAT+GGG | 0.552040 | 8_2:-35540887 | Msa1245440:CDS |
| ACAGAGTCCTCAGCTTTATG+GGG | 0.554892 | 8_2:-35539648 | Msa1245440:CDS |
| ATTCAACTTGCTCATTCTCA+AGG | 0.555225 | 8_2:+35542057 | None:intergenic |
| GCATCAGTGGTCAGGAGGGT+AGG | 0.555914 | 8_2:-35540150 | Msa1245440:CDS |
| GTTGGTGTTGCTGTGTATTG+TGG | 0.557525 | 8_2:-35542623 | Msa1245440:CDS |
| CACTCTGACTGAGAACAAGA+TGG | 0.558857 | 8_2:-35542132 | Msa1245440:CDS |
| ATGATCCAAATGGCTGATGT+TGG | 0.559216 | 8_2:-35540178 | Msa1245440:CDS |
| TCAATATTATGGATGGGGAG+TGG | 0.560880 | 8_2:-35542375 | Msa1245440:CDS |
| ACTGTAGATATAGCAAGTAT+GGG | 0.561451 | 8_2:-35539512 | Msa1245440:CDS |
| TAATCTATCAGCTTGACTGT+AGG | 0.565808 | 8_2:+35541691 | None:intergenic |
| AAGAATACTAATTGTGTGGT+TGG | 0.566670 | 8_2:-35542641 | Msa1245440:CDS |
| ATATGGATTTCAGGCTACAA+TGG | 0.568671 | 8_2:-35542726 | Msa1245440:CDS |
| TCAAGCTGATAGATTATCAA+GGG | 0.569002 | 8_2:-35541684 | Msa1245440:CDS |
| ATGACTCTAGCCATCGGAGA+TGG | 0.569025 | 8_2:-35540395 | Msa1245440:intron |
| TTACCAACGACTAGGCTACA+TGG | 0.572195 | 8_2:-35540047 | Msa1245440:CDS |
| TTGCAGGGCTATCTTTGATG+TGG | 0.575261 | 8_2:-35538523 | Msa1245440:intron |
| TATGCAGGTTCAATGTCTTG+GGG | 0.575323 | 8_2:-35541305 | Msa1245440:intron |
| TGATAGTGAACTGGAAGAAG+AGG | 0.576970 | 8_2:-35540608 | Msa1245440:intron |
| AGTCCACCTGATTACATCCA+TGG | 0.578614 | 8_2:+35539442 | None:intergenic |
| ATTGAGTCTCTAAGGAAAGC+CGG | 0.578620 | 8_2:-35540901 | Msa1245440:CDS |
| AAATCAGTGATGAAGATGCT+AGG | 0.579456 | 8_2:-35543327 | Msa1245440:CDS |
| AGTTATCAATATTATGGATG+GGG | 0.580201 | 8_2:-35542380 | Msa1245440:CDS |
| CTCTATAAGCATAAAACCAT+AGG | 0.580922 | 8_2:+35541621 | None:intergenic |
| CTGTAGATATAGCAAGTATG+GGG | 0.581531 | 8_2:-35539511 | Msa1245440:CDS |
| TAGCTCCGTTGCAAAAGGCT+GGG | 0.582525 | 8_2:-35540451 | Msa1245440:CDS |
| TCAAGACGGCTCCTCTTAGA+CGG | 0.582988 | 8_2:+35542563 | None:intergenic |
| AACGCTTTGCCATAACGTAT+CGG | 0.583942 | 8_2:+35539574 | None:intergenic |
| TATAGCTGTTGTCAAAGTGA+AGG | 0.584322 | 8_2:+35539769 | None:intergenic |
| CAAATGGCTGATGTTGGGGT+TGG | 0.584450 | 8_2:-35540172 | Msa1245440:CDS |
| TTCTGGTAGAAATTCAACTA+GGG | 0.587363 | 8_2:-35543440 | Msa1245440:CDS |
| GAATTCAAGATTTCAGTGTA+GGG | 0.587595 | 8_2:-35542213 | Msa1245440:CDS |
| GTTCCTCTCTTATTTGTACA+CGG | 0.589784 | 8_2:-35540079 | Msa1245440:CDS |
| AAAGCTATGCTCAATAACTC+AGG | 0.590314 | 8_2:-35542590 | Msa1245440:CDS |
| GTTCTGGTAGAAATTCAACT+AGG | 0.591194 | 8_2:-35543441 | Msa1245440:CDS |
| AGTTCATTTGTGTCTCAAGA+CGG | 0.592225 | 8_2:+35542549 | None:intergenic |
| TTAAGTTTCACGAAAAGGAG+AGG | 0.592804 | 8_2:-35542790 | Msa1245440:CDS |
| TATCAGCTTGACTGTAGGGT+CGG | 0.595910 | 8_2:+35541696 | None:intergenic |
| TTTCAATGCGCTAGTATTTG+GGG | 0.596349 | 8_2:-35542107 | Msa1245440:CDS |
| TTTCTCATGCATCCATTTGG+GGG | 0.597711 | 8_2:-35539415 | Msa1245440:CDS |
| CGGTAGCGCCCAATATGCAT+AGG | 0.597956 | 8_2:+35540962 | None:intergenic |
| CACTGGAATTACCAACGACT+AGG | 0.598882 | 8_2:-35540055 | Msa1245440:CDS |
| AAGTACTTCTATGATTGGTA+GGG | 0.600513 | 8_2:-35541025 | Msa1245440:CDS |
| GATCCAAATGGCTGATGTTG+GGG | 0.600913 | 8_2:-35540176 | Msa1245440:CDS |
| AAAGAATGTCTGTTATATTG+GGG | 0.603285 | 8_2:-35541257 | Msa1245440:CDS |
| AGGATATCGGGATCATAACC+TGG | 0.604549 | 8_2:+35542315 | None:intergenic |
| AAGCATAAAACCATAGGCAG+CGG | 0.609256 | 8_2:+35541627 | None:intergenic |
| ACTTTGAAGAATTCTCAGAT+GGG | 0.609588 | 8_2:+35543500 | None:intergenic |
| CCATCAATAATCAACGCCAT+AGG | 0.614847 | 8_2:+35540652 | None:intergenic |
| CGAGAAGTTTGAGAATAGAA+GGG | 0.615333 | 8_2:-35538376 | Msa1245440:CDS |
| GCACCATGTAGCCTAGTCGT+TGG | 0.617009 | 8_2:+35540044 | None:intergenic |
| TCGGATGTGTCAACAACAAG+AGG | 0.617316 | 8_2:+35541715 | None:intergenic |
| TACCAGTAACCATGAAGTGA+TGG | 0.617533 | 8_2:+35539347 | None:intergenic |
| ACAAGAAGAACAAAAGCCAA+TGG | 0.621288 | 8_2:+35543094 | None:intergenic |
| TCGTCAAAGCTACTAACAAG+TGG | 0.621738 | 8_2:-35540820 | Msa1245440:CDS |
| TGGATTTCAGGCTACAATGG+AGG | 0.622974 | 8_2:-35542723 | Msa1245440:CDS |
| AAGCTCCATAGAAATGTACA+AGG | 0.624504 | 8_2:+35542295 | None:intergenic |
| TGAACATACGCAACACCGGT+AGG | 0.626091 | 8_2:+35542875 | None:intergenic |
| TTTGGTCTCAGTGAATGGAA+AGG | 0.626806 | 8_2:-35541869 | Msa1245440:intron |
| GAAACAAACAACGTTGGTGT+TGG | 0.631441 | 8_2:-35543695 | Msa1245440:five_prime_UTR |
| AGAAGAATAAGAGTGAAGAT+GGG | 0.633351 | 8_2:+35541131 | None:intergenic |
| TCCGATGGCTAGAGTCATGT+CGG | 0.637075 | 8_2:+35540400 | None:intergenic |
| GATGGAAAGAGATTGTCACT+TGG | 0.637955 | 8_2:-35542698 | Msa1245440:CDS |
| CTTCCCCAATATGCAAAGAG+AGG | 0.638044 | 8_2:+35539536 | None:intergenic |
| ATCAATCATTATGTGACCTG+AGG | 0.639691 | 8_2:+35541594 | None:intergenic |
| CTGCAGTTTATCTTCAATAG+CGG | 0.645080 | 8_2:+35540942 | None:intergenic |
| AGATACCATACCATCTCCGA+TGG | 0.645447 | 8_2:+35540385 | None:intergenic |
| AGATTCTAGATTGTATGATG+AGG | 0.647520 | 8_2:-35542240 | Msa1245440:CDS |
| CAAACATAACCAGAATAATG+TGG | 0.654557 | 8_2:+35538494 | None:intergenic |
| CTCTCTCGTAAAGAATAGGA+CGG | 0.658957 | 8_2:-35540423 | Msa1245440:CDS |
| GCCGACATGACTCTAGCCAT+CGG | 0.659172 | 8_2:-35540401 | Msa1245440:CDS |
| ATATTCTTGGAGAACAACAA+AGG | 0.660993 | 8_2:-35541573 | Msa1245440:intron |
| TGGCCATGGATGTAATCAGG+TGG | 0.664998 | 8_2:-35539445 | Msa1245440:CDS |
| TTGTCGACGAGTGATCCTAC+CGG | 0.666383 | 8_2:-35542890 | Msa1245440:CDS |
| TGTCCAGCCCCATAAAGCTG+AGG | 0.666629 | 8_2:+35539641 | None:intergenic |
| TAAAGTATGGGTGTTGACTG+GGG | 0.668570 | 8_2:-35540875 | Msa1245440:CDS |
| TACTCGACAACAAAGAACAA+CGG | 0.673269 | 8_2:+35540472 | None:intergenic |
| AGTTTGAACATACGCAACAC+CGG | 0.674253 | 8_2:+35542871 | None:intergenic |
| ACTTAAGAATACTAATTGTG+TGG | 0.675064 | 8_2:-35542645 | Msa1245440:CDS |
| TGCAGATGTGAAGTGAAAGG+TGG | 0.676711 | 8_2:+35543815 | None:intergenic |
| TGTGAATTTGGACAGCACAA+TGG | 0.678439 | 8_2:+35543925 | None:intergenic |
| TGTCCGTGTACAAATAAGAG+AGG | 0.679867 | 8_2:+35540076 | None:intergenic |
| ACAAACTTTACAACAAAACG+TGG | 0.683285 | 8_2:+35538444 | None:intergenic |
| TGGGGCTGGACAAAGACAAG+AGG | 0.684412 | 8_2:-35539630 | Msa1245440:CDS |
| ATTGAAGATAAACTGCAGCA+AGG | 0.685229 | 8_2:-35540937 | Msa1245440:CDS |
| TGTTGCAGATGTGAAGTGAA+AGG | 0.685702 | 8_2:+35543812 | None:intergenic |
| GACAACAAAACAAAATCACA+AGG | 0.688219 | 8_2:+35542908 | None:intergenic |
| CAAGCTGATAGATTATCAAG+GGG | 0.688461 | 8_2:-35541683 | Msa1245440:CDS |
| GGTAAACTATAACCGACATG+AGG | 0.690892 | 8_2:+35542336 | None:intergenic |
| TGTAGATATAGCAAGTATGG+GGG | 0.698937 | 8_2:-35539510 | Msa1245440:CDS |
| GTGTGTGAAACAAACAACGT+TGG | 0.752417 | 8_2:-35543701 | Msa1245440:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTTTATTATGTTTTAAAA+TGG | - | chr8_2:35542814-35542833 | Msa1245440:CDS | 10.0% |
| !!! | ATTAAGGTTGTTTTAAATAT+GGG | + | chr8_2:35538400-35538419 | None:intergenic | 15.0% |
| !!! | TATTAAGGTTGTTTTAAATA+TGG | + | chr8_2:35538401-35538420 | None:intergenic | 15.0% |
| !! | TAGTACTAAAACATTTATTA+AGG | + | chr8_2:35538416-35538435 | None:intergenic | 15.0% |
| !! | TATAACATGGTTATAAAAAA+CGG | - | chr8_2:35543026-35543045 | Msa1245440:CDS | 15.0% |
| !! | AAAAAGAAATAATACAACAA+AGG | + | chr8_2:35543724-35543743 | None:intergenic | 15.0% |
| !! | GTTCTTGTATTTATAAAATT+AGG | - | chr8_2:35543863-35543882 | Msa1245440:five_prime_UTR | 15.0% |
| !!! | TTTTATGTCTTTTTGATGAT+TGG | - | chr8_2:35538340-35538359 | Msa1245440:CDS | 20.0% |
| !! | TTTAGTACTAGAACAAATTA+TGG | - | chr8_2:35538426-35538445 | Msa1245440:CDS | 20.0% |
| !!! | AGTTATAAAAGAGTATTTTC+CGG | + | chr8_2:35538768-35538787 | None:intergenic | 20.0% |
| !! | GATTAAGTATAGCAATTATA+AGG | + | chr8_2:35538844-35538863 | None:intergenic | 20.0% |
| !! | AATCCATATATATTCCTATT+CGG | + | chr8_2:35539265-35539284 | None:intergenic | 20.0% |
| !! | ATTACCTTATTATAGGAAAT+TGG | - | chr8_2:35539576-35539595 | Msa1245440:CDS | 20.0% |
| !! | AAATCCAATTTCCTATAATA+AGG | + | chr8_2:35539583-35539602 | None:intergenic | 20.0% |
| !! | AAAGTTATCAATATTATGGA+TGG | - | chr8_2:35539620-35539639 | Msa1245440:CDS | 20.0% |
| !! | AAGTTATCAATATTATGGAT+GGG | - | chr8_2:35539621-35539640 | Msa1245440:CDS | 20.0% |
| !! | TAAATCTTCATTGATATTCA+AGG | + | chr8_2:35539815-35539834 | None:intergenic | 20.0% |
| !! | TTGAATATCAATGAAGATTT+AGG | - | chr8_2:35539814-35539833 | Msa1245440:intron | 20.0% |
| !! | TGAATATCAATGAAGATTTA+GGG | - | chr8_2:35539815-35539834 | Msa1245440:intron | 20.0% |
| !!! | CATATTTTTGTGTTGTTATT+TGG | - | chr8_2:35540115-35540134 | Msa1245440:CDS | 20.0% |
| !! | AACATAAAAATATCTGTTTG+GGG | + | chr8_2:35540498-35540517 | None:intergenic | 20.0% |
| !! | CAACATAAAAATATCTGTTT+GGG | + | chr8_2:35540499-35540518 | None:intergenic | 20.0% |
| !! | TCAACATAAAAATATCTGTT+TGG | + | chr8_2:35540500-35540519 | None:intergenic | 20.0% |
| !! | AAAAGAATGTCTGTTATATT+GGG | - | chr8_2:35540744-35540763 | Msa1245440:CDS | 20.0% |
| !!! | TTTTGTTCTCATTATTTGAA+GGG | + | chr8_2:35541671-35541690 | None:intergenic | 20.0% |
| !!! | ATTTTGTTCTCATTATTTGA+AGG | + | chr8_2:35541672-35541691 | None:intergenic | 20.0% |
| !! | AATAATGAGAACAAAATACA+AGG | - | chr8_2:35541675-35541694 | Msa1245440:CDS | 20.0% |
| !!! | GTTTTTTATAACCATGTTAT+AGG | + | chr8_2:35543027-35543046 | None:intergenic | 20.0% |
| !! | AAATGTAATTTATACGTAGA+TGG | - | chr8_2:35543091-35543110 | Msa1245440:CDS | 20.0% |
| !! | TGTAAAGTTATTCATTCTTT+AGG | - | chr8_2:35543743-35543762 | Msa1245440:five_prime_UTR | 20.0% |
| ! | GTGAAAGAAGAAAAAAAAAC+TGG | + | chr8_2:35538251-35538270 | None:intergenic | 25.0% |
| ! | GTCAAAAAGTCAAATTATGA+TGG | - | chr8_2:35538469-35538488 | Msa1245440:CDS | 25.0% |
| !! | CTTTTATAACTTTTCTTCCT+AGG | - | chr8_2:35538777-35538796 | Msa1245440:intron | 25.0% |
| ! | AAATGGAAAGATATTAGAGT+TGG | - | chr8_2:35539037-35539056 | Msa1245440:intron | 25.0% |
| ! | AAAACAAAATCACAAGGAAT+CGG | + | chr8_2:35539091-35539110 | None:intergenic | 25.0% |
| !! | TCAATTTAAGTTTCACGAAA+AGG | - | chr8_2:35539207-35539226 | Msa1245440:intron | 25.0% |
| ! | AAACCGAATAGGAATATATA+TGG | - | chr8_2:35539259-35539278 | Msa1245440:intron | 25.0% |
| ! | TAGGAATATATATGGATTTC+AGG | - | chr8_2:35539267-35539286 | Msa1245440:intron | 25.0% |
| ! | ACTTAAGAATACTAATTGTG+TGG | - | chr8_2:35539357-35539376 | Msa1245440:CDS | 25.0% |
| ! | TGAATCGATTACCTTATTAT+AGG | - | chr8_2:35539569-35539588 | Msa1245440:CDS | 25.0% |
| !!! | TAGGAAATTGGATTTTTCAA+AGG | - | chr8_2:35539588-35539607 | Msa1245440:CDS | 25.0% |
| !!! | AGGAAATTGGATTTTTCAAA+GGG | - | chr8_2:35539589-35539608 | Msa1245440:CDS | 25.0% |
| ! | GAGGAAAGTTATCAATATTA+TGG | - | chr8_2:35539616-35539635 | Msa1245440:CDS | 25.0% |
| ! | AGTTATCAATATTATGGATG+GGG | - | chr8_2:35539622-35539641 | Msa1245440:CDS | 25.0% |
| ! | ATAGAAATGTACAAGGATAT+CGG | + | chr8_2:35539703-35539722 | None:intergenic | 25.0% |
| ! | CACATAATGATTGATATTCT+TGG | - | chr8_2:35540416-35540435 | Msa1245440:CDS | 25.0% |
| !!! | TTAGAATGATTTGCTGTTAA+TGG | - | chr8_2:35540531-35540550 | Msa1245440:intron | 25.0% |
| !!! | CTGTTAATGGTTTTGTATTA+AGG | - | chr8_2:35540544-35540563 | Msa1245440:intron | 25.0% |
| ! | CATAAAAAAAGGACTACTTT+GGG | + | chr8_2:35540659-35540678 | None:intergenic | 25.0% |
| ! | TCATAAAAAAAGGACTACTT+TGG | + | chr8_2:35540660-35540679 | None:intergenic | 25.0% |
| !!! | ATGAGAGCATTCATAAAAAA+AGG | + | chr8_2:35540670-35540689 | None:intergenic | 25.0% |
| !! | TTTTATGAATGCTCTCATTT+TGG | - | chr8_2:35540672-35540691 | Msa1245440:CDS | 25.0% |
| !! | TTTATGAATGCTCTCATTTT+GGG | - | chr8_2:35540673-35540692 | Msa1245440:CDS | 25.0% |
| ! | GAAAAGAATGTCTGTTATAT+TGG | - | chr8_2:35540743-35540762 | Msa1245440:CDS | 25.0% |
| ! | AAAGAATGTCTGTTATATTG+GGG | - | chr8_2:35540745-35540764 | Msa1245440:CDS | 25.0% |
| ! | ATTGAATACAGACATAATAC+AGG | - | chr8_2:35540839-35540858 | Msa1245440:CDS | 25.0% |
| ! | AGAAAATAACCTATGCATAT+TGG | - | chr8_2:35541031-35541050 | Msa1245440:CDS | 25.0% |
| ! | GAAAATAACCTATGCATATT+GGG | - | chr8_2:35541032-35541051 | Msa1245440:CDS | 25.0% |
| ! | CACTATCAAGAATATATACA+AGG | + | chr8_2:35541382-35541401 | None:intergenic | 25.0% |
| !!! | ATATATTCTTGATAGTGAAC+TGG | - | chr8_2:35541385-35541404 | Msa1245440:intron | 25.0% |
| !!! | CCAAAACAATTTTTTGTTGT+AGG | + | chr8_2:35542398-35542417 | None:intergenic | 25.0% |
| !! | CCTACAACAAAAAATTGTTT+TGG | - | chr8_2:35542395-35542414 | Msa1245440:CDS | 25.0% |
| !! | GACTATTTCGATAGTTATTT+TGG | - | chr8_2:35542522-35542541 | Msa1245440:CDS | 25.0% |
| ! | ATAGATTAGTACTCGTTAAT+TGG | - | chr8_2:35542980-35542999 | Msa1245440:CDS | 25.0% |
| !!! | ATTGATTTTTCCATCCATAA+AGG | + | chr8_2:35543149-35543168 | None:intergenic | 25.0% |
| !! | TTATTCTGGTTATGTTTGTT+TGG | - | chr8_2:35543513-35543532 | Msa1245440:CDS | 25.0% |
| ! | CATCAGAATATTATTGATGT+TGG | - | chr8_2:35543769-35543788 | Msa1245440:five_prime_UTR | 25.0% |
| ! | GATAGAAAACAATGAAATCA+TGG | + | chr8_2:35543798-35543817 | None:intergenic | 25.0% |
| !! | TTTCATTGTTTTCTATCCAA+AGG | - | chr8_2:35543801-35543820 | Msa1245440:five_prime_UTR | 25.0% |
| !! | TTCATTGTTTTCTATCCAAA+GGG | - | chr8_2:35543802-35543821 | Msa1245440:five_prime_UTR | 25.0% |
| ATAAAGAAGTAGAAGCAAGT+TGG | + | chr8_2:35538114-35538133 | None:intergenic | 30.0% | |
| ! | ATTTTCCAGATTTGAACTTC+TGG | - | chr8_2:35538212-35538231 | Msa1245440:three_prime_UTR | 30.0% |
| ! | TTTTCCAGATTTGAACTTCT+GGG | - | chr8_2:35538213-35538232 | Msa1245440:three_prime_UTR | 30.0% |
| ! | ACTTTGAAGAATTCTCAGAT+GGG | + | chr8_2:35538505-35538524 | None:intergenic | 30.0% |
| ! | AACTTTGAAGAATTCTCAGA+TGG | + | chr8_2:35538506-35538525 | None:intergenic | 30.0% |
| TTCTGGTAGAAATTCAACTA+GGG | - | chr8_2:35538562-35538581 | Msa1245440:intron | 30.0% | |
| AATCTCTCATTTGTTCTATC+AGG | + | chr8_2:35538719-35538738 | None:intergenic | 30.0% | |
| AATGAGAGATTTGAATTTGC+AGG | - | chr8_2:35538728-35538747 | Msa1245440:intron | 30.0% | |
| ATGAGAGATTTGAATTTGCA+GGG | - | chr8_2:35538729-35538748 | Msa1245440:intron | 30.0% | |
| ATTTGAATTTGCAGGGAATT+CGG | - | chr8_2:35538736-35538755 | Msa1245440:intron | 30.0% | |
| AACTGTTCAAACAAATTCCT+AGG | + | chr8_2:35538797-35538816 | None:intergenic | 30.0% | |
| CAGATAAAGTTGAGAACAAT+AGG | - | chr8_2:35538975-35538994 | Msa1245440:intron | 30.0% | |
| AAAGTTGAGAACAATAGGTT+AGG | - | chr8_2:35538980-35538999 | Msa1245440:intron | 30.0% | |
| !!! | TTAGGATTGGTTTTGGTTAA+TGG | - | chr8_2:35538998-35539017 | Msa1245440:intron | 30.0% |
| GTCATTTCATAGAGAAGAAA+TGG | - | chr8_2:35539020-35539039 | Msa1245440:intron | 30.0% | |
| GACAACAAAACAAAATCACA+AGG | + | chr8_2:35539097-35539116 | None:intergenic | 30.0% | |
| GTTCAAACTCTTAATCTAGA+TGG | - | chr8_2:35539145-35539164 | Msa1245440:intron | 30.0% | |
| AAGAATACTAATTGTGTGGT+TGG | - | chr8_2:35539361-35539380 | Msa1245440:CDS | 30.0% | |
| TAGAAATGTACAAGGATATC+GGG | + | chr8_2:35539702-35539721 | None:intergenic | 30.0% | |
| GATATCCTTGTACATTTCTA+TGG | - | chr8_2:35539702-35539721 | Msa1245440:CDS | 30.0% | |
| AGAATCTTTGATCATGAAGT+AGG | + | chr8_2:35539749-35539768 | None:intergenic | 30.0% | |
| AGATTCTAGATTGTATGATG+AGG | - | chr8_2:35539762-35539781 | Msa1245440:CDS | 30.0% | |
| GAATTCAAGATTTCAGTGTA+GGG | - | chr8_2:35539789-35539808 | Msa1245440:CDS | 30.0% | |
| ! | TATGTCTTTTCAGACAAAAC+TGG | - | chr8_2:35539847-35539866 | Msa1245440:intron | 30.0% |
| ! | TTAACTTTCACCCTCATTTT+TGG | + | chr8_2:35540167-35540186 | None:intergenic | 30.0% |
| TCAAGCTGATAGATTATCAA+GGG | - | chr8_2:35540318-35540337 | Msa1245440:intron | 30.0% | |
| CTCTATAAGCATAAAACCAT+AGG | + | chr8_2:35540384-35540403 | None:intergenic | 30.0% | |
| ATATTCTTGGAGAACAACAA+AGG | - | chr8_2:35540429-35540448 | Msa1245440:CDS | 30.0% | |
| !! | TGCATGAATTTGATAGTGAT+CGG | - | chr8_2:35540721-35540740 | Msa1245440:CDS | 30.0% |
| AGAAGAATAAGAGTGAAGAT+GGG | + | chr8_2:35540874-35540893 | None:intergenic | 30.0% | |
| ATGCTTCAGAATTTGATCAA+TGG | - | chr8_2:35540934-35540953 | Msa1245440:CDS | 30.0% | |
| AAGTACTTCTATGATTGGTA+GGG | - | chr8_2:35540977-35540996 | Msa1245440:CDS | 30.0% | |
| ! | TATATTGAAGGAAGTTCTGA+TGG | - | chr8_2:35541314-35541333 | Msa1245440:intron | 30.0% |
| ATCAAGAATATATACAAGGC+TGG | + | chr8_2:35541378-35541397 | None:intergenic | 30.0% | |
| AAATACAAGGACAGAGAAAA+TGG | - | chr8_2:35541688-35541707 | Msa1245440:CDS | 30.0% | |
| ! | TCTTTGTGCTAATTCTGTTT+TGG | - | chr8_2:35542005-35542024 | Msa1245440:intron | 30.0% |
| TGACAACAGCTATAAATGAA+TGG | - | chr8_2:35542242-35542261 | Msa1245440:CDS | 30.0% | |
| AAAATGGCAACAACAATAGT+TGG | + | chr8_2:35542304-35542323 | None:intergenic | 30.0% | |
| ACTAAGATCCTTGTCAAAAA+TGG | + | chr8_2:35542320-35542339 | None:intergenic | 30.0% | |
| TTGACAAGGATCTTAGTAAA+AGG | - | chr8_2:35542323-35542342 | Msa1245440:CDS | 30.0% | |
| ACTGTAGATATAGCAAGTAT+GGG | - | chr8_2:35542490-35542509 | Msa1245440:CDS | 30.0% | |
| !!! | TATTTTGGTCAATTTGCACT+TGG | - | chr8_2:35542537-35542556 | Msa1245440:CDS | 30.0% |
| TTCAATTCCTAACTCATGTA+TGG | - | chr8_2:35542895-35542914 | Msa1245440:CDS | 30.0% | |
| TAACGAGTACTAATCTATGT+CGG | + | chr8_2:35542978-35542997 | None:intergenic | 30.0% | |
| GTAATTTATACGTAGATGGA+AGG | - | chr8_2:35543095-35543114 | Msa1245440:CDS | 30.0% | |
| !! | CAAAGTTGACTTGTAAGATA+AGG | + | chr8_2:35543237-35543256 | None:intergenic | 30.0% |
| ATCTTACAAGTCAACTTTGT+AGG | - | chr8_2:35543238-35543257 | Msa1245440:CDS | 30.0% | |
| TCTTACAAGTCAACTTTGTA+GGG | - | chr8_2:35543239-35543258 | Msa1245440:CDS | 30.0% | |
| !! | TGTTTCTATCCTAGTCTTAT+TGG | - | chr8_2:35543298-35543317 | Msa1245440:CDS | 30.0% |
| CAAACATAACCAGAATAATG+TGG | + | chr8_2:35543511-35543530 | None:intergenic | 30.0% | |
| ACAAACTTTACAACAAAACG+TGG | + | chr8_2:35543561-35543580 | None:intergenic | 30.0% | |
| TCTTGAAATCTGAATATCGT+CGG | + | chr8_2:35543601-35543620 | None:intergenic | 30.0% | |
| AAAAAACTCTATCTACCCTT+TGG | + | chr8_2:35543820-35543839 | None:intergenic | 30.0% | |
| TGAAAGGTGGTAGAAGAAAA+GGG | + | chr8_2:35538177-35538196 | None:intergenic | 35.0% | |
| TTCTTCTTTCACTCTGTCTT+TGG | - | chr8_2:35538259-35538278 | Msa1245440:three_prime_UTR | 35.0% | |
| TCATCATCAAGAAGAAGTTC+TGG | - | chr8_2:35538545-35538564 | Msa1245440:intron | 35.0% | |
| GTTCTGGTAGAAATTCAACT+AGG | - | chr8_2:35538561-35538580 | Msa1245440:intron | 35.0% | |
| TGATCCATATCTTACAGGTT+TGG | + | chr8_2:35538612-35538631 | None:intergenic | 35.0% | |
| ACCTGTAAGATATGGATCAA+AGG | - | chr8_2:35538613-35538632 | Msa1245440:intron | 35.0% | |
| CCTGTAAGATATGGATCAAA+GGG | - | chr8_2:35538614-35538633 | Msa1245440:intron | 35.0% | |
| AAATCAGTGATGAAGATGCT+AGG | - | chr8_2:35538675-35538694 | Msa1245440:intron | 35.0% | |
| !! | TTACCTCAACTAGCTGTTTT+TGG | - | chr8_2:35538866-35538885 | Msa1245440:intron | 35.0% |
| ! | AGGTGTATCAATTTTGCCAT+TGG | - | chr8_2:35538892-35538911 | Msa1245440:intron | 35.0% |
| ACAAGAAGAACAAAAGCCAA+TGG | + | chr8_2:35538911-35538930 | None:intergenic | 35.0% | |
| TGAAAGATGCATATGAGGAT+TGG | - | chr8_2:35538939-35538958 | Msa1245440:intron | 35.0% | |
| TGAGAACAATAGGTTAGGAT+TGG | - | chr8_2:35538985-35539004 | Msa1245440:intron | 35.0% | |
| !!! | CAATAGGTTAGGATTGGTTT+TGG | - | chr8_2:35538991-35539010 | Msa1245440:intron | 35.0% |
| GTGAGTCTAATTTGAAGACT+AGG | - | chr8_2:35539167-35539186 | Msa1245440:intron | 35.0% | |
| TTAAGTTTCACGAAAAGGAG+AGG | - | chr8_2:35539212-35539231 | Msa1245440:intron | 35.0% | |
| ATATGGATTTCAGGCTACAA+TGG | - | chr8_2:35539276-35539295 | Msa1245440:intron | 35.0% | |
| TCCTCGAATATTGTACTTAG+AGG | - | chr8_2:35539328-35539347 | Msa1245440:intron | 35.0% | |
| TCCTCTAAGTACAATATTCG+AGG | + | chr8_2:35539332-35539351 | None:intergenic | 35.0% | |
| AAAGCTATGCTCAATAACTC+AGG | - | chr8_2:35539412-35539431 | Msa1245440:CDS | 35.0% | |
| AGTTCATTTGTGTCTCAAGA+CGG | + | chr8_2:35539456-35539475 | None:intergenic | 35.0% | |
| !! | GGATTTTTCAAAGGGAAAAG+AGG | - | chr8_2:35539597-35539616 | Msa1245440:CDS | 35.0% |
| AAGCTCCATAGAAATGTACA+AGG | + | chr8_2:35539710-35539729 | None:intergenic | 35.0% | |
| CGAATTCAAGATTTCAGTGT+AGG | - | chr8_2:35539788-35539807 | Msa1245440:CDS | 35.0% | |
| AGTTTCAATGCGCTAGTATT+TGG | - | chr8_2:35539893-35539912 | Msa1245440:intron | 35.0% | |
| GTTTCAATGCGCTAGTATTT+GGG | - | chr8_2:35539894-35539913 | Msa1245440:intron | 35.0% | |
| TTTCAATGCGCTAGTATTTG+GGG | - | chr8_2:35539895-35539914 | Msa1245440:intron | 35.0% | |
| ! | ATTCAACTTGCTCATTCTCA+AGG | + | chr8_2:35539948-35539967 | None:intergenic | 35.0% |
| ! | CAAGTTGAATACTCTCTTCA+AGG | - | chr8_2:35539958-35539977 | Msa1245440:intron | 35.0% |
| ! | TGTTATTTGGTCTCAGTGAA+TGG | - | chr8_2:35540128-35540147 | Msa1245440:CDS | 35.0% |
| CTTATGCGATTAGCAAAAAG+TGG | - | chr8_2:35540194-35540213 | Msa1245440:CDS | 35.0% | |
| TTGCAAGCAAAGATGGAAAA+CGG | - | chr8_2:35540219-35540238 | Msa1245440:intron | 35.0% | |
| TTACGATTTCTTTCTTGCAC+TGG | - | chr8_2:35540244-35540263 | Msa1245440:intron | 35.0% | |
| AATCTATCAGCTTGACTGTA+GGG | + | chr8_2:35540313-35540332 | None:intergenic | 35.0% | |
| TAATCTATCAGCTTGACTGT+AGG | + | chr8_2:35540314-35540333 | None:intergenic | 35.0% | |
| GTCAAGCTGATAGATTATCA+AGG | - | chr8_2:35540317-35540336 | Msa1245440:intron | 35.0% | |
| CAAGCTGATAGATTATCAAG+GGG | - | chr8_2:35540319-35540338 | Msa1245440:intron | 35.0% | |
| ATCAATCATTATGTGACCTG+AGG | + | chr8_2:35540411-35540430 | None:intergenic | 35.0% | |
| TAAAGCAGTTGAAGGAGTTA+AGG | + | chr8_2:35540621-35540640 | None:intergenic | 35.0% | |
| !! | TACTTTGGGACCTAATTCAA+GGG | + | chr8_2:35540645-35540664 | None:intergenic | 35.0% |
| CAGAAGAATAAGAGTGAAGA+TGG | + | chr8_2:35540875-35540894 | None:intergenic | 35.0% | |
| TCTTCACTCTTATTCTTCTG+TGG | - | chr8_2:35540875-35540894 | Msa1245440:CDS | 35.0% | |
| CTTCACTCTTATTCTTCTGT+GGG | - | chr8_2:35540876-35540895 | Msa1245440:CDS | 35.0% | |
| CAAGTACTTCTATGATTGGT+AGG | - | chr8_2:35540976-35540995 | Msa1245440:CDS | 35.0% | |
| CTGCAGTTTATCTTCAATAG+CGG | + | chr8_2:35541063-35541082 | None:intergenic | 35.0% | |
| ATTGAAGATAAACTGCAGCA+AGG | - | chr8_2:35541065-35541084 | Msa1245440:CDS | 35.0% | |
| GAAAGCCGGTATTAAAGTAT+GGG | - | chr8_2:35541115-35541134 | Msa1245440:CDS | 35.0% | |
| CAACACCCATACTTTAATAC+CGG | + | chr8_2:35541123-35541142 | None:intergenic | 35.0% | |
| !! | ATTAAAGTATGGGTGTTGAC+TGG | - | chr8_2:35541125-35541144 | Msa1245440:CDS | 35.0% |
| !! | TTAAAGTATGGGTGTTGACT+GGG | - | chr8_2:35541126-35541145 | Msa1245440:CDS | 35.0% |
| CAAGAAACTGCCATATCAAT+TGG | - | chr8_2:35541155-35541174 | Msa1245440:CDS | 35.0% | |
| ! | ATGTGTTGATAGATCTCAGA+TGG | - | chr8_2:35541418-35541437 | Msa1245440:intron | 35.0% |
| TACTCGACAACAAAGAACAA+CGG | + | chr8_2:35541533-35541552 | None:intergenic | 35.0% | |
| TTGTCTCTCTCGTAAAGAAT+AGG | - | chr8_2:35541575-35541594 | Msa1245440:CDS | 35.0% | |
| ! | GGAAAAGAGAGAAAAAGCAT+CGG | - | chr8_2:35541709-35541728 | Msa1245440:CDS | 35.0% |
| CTTTCTCCTTCATGTGTTAT+AGG | - | chr8_2:35541785-35541804 | Msa1245440:CDS | 35.0% | |
| TTAGCACCTATAACACATGA+AGG | + | chr8_2:35541794-35541813 | None:intergenic | 35.0% | |
| CGATGTATCAATGATCCAAA+TGG | - | chr8_2:35541814-35541833 | Msa1245440:CDS | 35.0% | |
| ! | AATGGCTTCAGATTTTGCAA+TGG | - | chr8_2:35541883-35541902 | Msa1245440:intron | 35.0% |
| ! | ATGGCTTCAGATTTTGCAAT+GGG | - | chr8_2:35541884-35541903 | Msa1245440:intron | 35.0% |
| ! | GTTCCTCTCTTATTTGTACA+CGG | - | chr8_2:35541923-35541942 | Msa1245440:intron | 35.0% |
| !!! | TTTGTGGCTTTTAAGATGCA+TGG | - | chr8_2:35542144-35542163 | Msa1245440:CDS | 35.0% |
| TATAGCTGTTGTCAAAGTGA+AGG | + | chr8_2:35542236-35542255 | None:intergenic | 35.0% | |
| !!! | TGTTGTTGCCATTTTTGACA+AGG | - | chr8_2:35542309-35542328 | Msa1245440:CDS | 35.0% |
| TTGTTCCTCTCTTTGCATAT+TGG | - | chr8_2:35542461-35542480 | Msa1245440:CDS | 35.0% | |
| TGTTCCTCTCTTTGCATATT+GGG | - | chr8_2:35542462-35542481 | Msa1245440:CDS | 35.0% | |
| CACTGTAGATATAGCAAGTA+TGG | - | chr8_2:35542489-35542508 | Msa1245440:CDS | 35.0% | |
| CTGTAGATATAGCAAGTATG+GGG | - | chr8_2:35542491-35542510 | Msa1245440:CDS | 35.0% | |
| TGTAGATATAGCAAGTATGG+GGG | - | chr8_2:35542492-35542511 | Msa1245440:CDS | 35.0% | |
| GATTTCTCATGCATCCATTT+GGG | - | chr8_2:35542585-35542604 | Msa1245440:CDS | 35.0% | |
| ATTTCTCATGCATCCATTTG+GGG | - | chr8_2:35542586-35542605 | Msa1245440:CDS | 35.0% | |
| ! | GTTTTCTCCATACATGAGTT+AGG | + | chr8_2:35542905-35542924 | None:intergenic | 35.0% |
| ATGTATGGAGAAAACTCTGT+TGG | - | chr8_2:35542910-35542929 | Msa1245440:CDS | 35.0% | |
| TGTATGGAGAAAACTCTGTT+GGG | - | chr8_2:35542911-35542930 | Msa1245440:CDS | 35.0% | |
| AACGAGTACTAATCTATGTC+GGG | + | chr8_2:35542977-35542996 | None:intergenic | 35.0% | |
| TTAGTACTCGTTAATTGGTG+TGG | - | chr8_2:35542985-35543004 | Msa1245440:CDS | 35.0% | |
| GATACTTCGTACCTATAACA+TGG | - | chr8_2:35543013-35543032 | Msa1245440:CDS | 35.0% | |
| CCAACGTAGACTTATTTAAG+AGG | + | chr8_2:35543172-35543191 | None:intergenic | 35.0% | |
| CCTCTTAAATAAGTCTACGT+TGG | - | chr8_2:35543169-35543188 | Msa1245440:CDS | 35.0% | |
| AATAAGTCTACGTTGGATAG+TGG | - | chr8_2:35543176-35543195 | Msa1245440:CDS | 35.0% | |
| TGTTCCAAATGTTCAATCCT+AGG | - | chr8_2:35543334-35543353 | Msa1245440:CDS | 35.0% | |
| ACTATTTAAGCCATCCAATG+TGG | + | chr8_2:35543384-35543403 | None:intergenic | 35.0% | |
| ACATGTGTACAAAACTTTGC+AGG | - | chr8_2:35543463-35543482 | Msa1245440:CDS | 35.0% | |
| CATGTGTACAAAACTTTGCA+GGG | - | chr8_2:35543464-35543483 | Msa1245440:CDS | 35.0% | |
| CTTGAAATCTGAATATCGTC+GGG | + | chr8_2:35543600-35543619 | None:intergenic | 35.0% | |
| TCGAGAAGTTTGAGAATAGA+AGG | - | chr8_2:35543625-35543644 | Msa1245440:five_prime_UTR | 35.0% | |
| CGAGAAGTTTGAGAATAGAA+GGG | - | chr8_2:35543626-35543645 | Msa1245440:five_prime_UTR | 35.0% | |
| TTTGAGAATAGAAGGGTCAA+TGG | - | chr8_2:35543633-35543652 | Msa1245440:five_prime_UTR | 35.0% | |
| CAACACTAGTGTTATCTTTG+TGG | + | chr8_2:35543693-35543712 | None:intergenic | 35.0% | |
| TGTGAATTTGGACAGCACAA+TGG | + | chr8_2:35538080-35538099 | None:intergenic | 40.0% | |
| GTGAGAGATGCTTGTGAATT+TGG | + | chr8_2:35538092-35538111 | None:intergenic | 40.0% | |
| !! | AAAGGGTAGCTTTGGAGAAA+TGG | + | chr8_2:35538160-35538179 | None:intergenic | 40.0% |
| GTAGAAGAAAAGGGTAGCTT+TGG | + | chr8_2:35538168-35538187 | None:intergenic | 40.0% | |
| GTGAAAGGTGGTAGAAGAAA+AGG | + | chr8_2:35538178-35538197 | None:intergenic | 40.0% | |
| TGTTGCAGATGTGAAGTGAA+AGG | + | chr8_2:35538193-35538212 | None:intergenic | 40.0% | |
| CAAACCCAGAAGTTCAAATC+TGG | + | chr8_2:35538220-35538239 | None:intergenic | 40.0% | |
| GTGTGTGAAACAAACAACGT+TGG | - | chr8_2:35538301-35538320 | Msa1245440:three_prime_UTR | 40.0% | |
| GAAACAAACAACGTTGGTGT+TGG | - | chr8_2:35538307-35538326 | Msa1245440:exon | 40.0% | |
| !! | TCAACTAGGGAAGTCACTTT+TGG | - | chr8_2:35538575-35538594 | Msa1245440:intron | 40.0% |
| GAGTCCAAACCTGTAAGATA+TGG | - | chr8_2:35538605-35538624 | Msa1245440:intron | 40.0% | |
| CCCTTTGATCCATATCTTAC+AGG | + | chr8_2:35538617-35538636 | None:intergenic | 40.0% | |
| AATTTGCAGGGAATTCGGTT+CGG | - | chr8_2:35538741-35538760 | Msa1245440:intron | 40.0% | |
| CTACCAAAAACAGCTAGTTG+AGG | + | chr8_2:35538872-35538891 | None:intergenic | 40.0% | |
| !!! | CAACTAGCTGTTTTTGGTAG+AGG | - | chr8_2:35538872-35538891 | Msa1245440:intron | 40.0% |
| TGCTGTGAAAGATGCATATG+AGG | - | chr8_2:35538934-35538953 | Msa1245440:intron | 40.0% | |
| AAGATGCATATGAGGATTGG+AGG | - | chr8_2:35538942-35538961 | Msa1245440:intron | 40.0% | |
| AGTTTGAACATACGCAACAC+CGG | + | chr8_2:35539134-35539153 | None:intergenic | 40.0% | |
| TTAAGTGCGAGAAACCGAAT+AGG | - | chr8_2:35539248-35539267 | Msa1245440:intron | 40.0% | |
| GATGGAAAGAGATTGTCACT+TGG | - | chr8_2:35539304-35539323 | Msa1245440:intron | 40.0% | |
| ! | TGAGCATAGCTTTTGTCTCA+CGG | + | chr8_2:35539405-35539424 | None:intergenic | 40.0% |
| TCAATATTATGGATGGGGAG+TGG | - | chr8_2:35539627-35539646 | Msa1245440:CDS | 40.0% | |
| ! | CCTTTTCACATTCCTCATGT+CGG | - | chr8_2:35539654-35539673 | Msa1245440:CDS | 40.0% |
| GGTAAACTATAACCGACATG+AGG | + | chr8_2:35539669-35539688 | None:intergenic | 40.0% | |
| ! | CATGTCGGTTATAGTTTACC+AGG | - | chr8_2:35539669-35539688 | Msa1245440:CDS | 40.0% |
| TTTGGTCTCAGTGAATGGAA+AGG | - | chr8_2:35540133-35540152 | Msa1245440:CDS | 40.0% | |
| AGGTCTTGAAGCCAAAAATG+AGG | - | chr8_2:35540153-35540172 | Msa1245440:CDS | 40.0% | |
| GGTCTTGAAGCCAAAAATGA+GGG | - | chr8_2:35540154-35540173 | Msa1245440:CDS | 40.0% | |
| ! | AGTGGATTTGCAAGCAAAGA+TGG | - | chr8_2:35540212-35540231 | Msa1245440:intron | 40.0% |
| TATGTCAACGCTTGTTCATC+TGG | + | chr8_2:35540350-35540369 | None:intergenic | 40.0% | |
| AAGCATAAAACCATAGGCAG+CGG | + | chr8_2:35540378-35540397 | None:intergenic | 40.0% | |
| ACTGCTTTAGCCCTTGAATT+AGG | - | chr8_2:35540632-35540651 | Msa1245440:CDS | 40.0% | |
| !! | CTACTTTGGGACCTAATTCA+AGG | + | chr8_2:35540646-35540665 | None:intergenic | 40.0% |
| CTATGCAGGTTCAATGTCTT+GGG | - | chr8_2:35540696-35540715 | Msa1245440:CDS | 40.0% | |
| TATGCAGGTTCAATGTCTTG+GGG | - | chr8_2:35540697-35540716 | Msa1245440:CDS | 40.0% | |
| ATTGGGGTGCAATGACAATT+CGG | - | chr8_2:35540761-35540780 | Msa1245440:CDS | 40.0% | |
| ! | TCGGTGAAACTTTTCGTCAA+AGG | - | chr8_2:35540780-35540799 | Msa1245440:CDS | 40.0% |
| ! | CGGTGAAACTTTTCGTCAAA+GGG | - | chr8_2:35540781-35540800 | Msa1245440:CDS | 40.0% |
| ! | GGTGAAACTTTTCGTCAAAG+GGG | - | chr8_2:35540782-35540801 | Msa1245440:CDS | 40.0% |
| CTTATTCTTCTGTGGGTTTG+AGG | - | chr8_2:35540883-35540902 | Msa1245440:CDS | 40.0% | |
| !! | GTTTGAGGACGCTTGTTATT+GGG | - | chr8_2:35540898-35540917 | Msa1245440:CDS | 40.0% |
| ! | TCAATGGCATTTTGCCTTTG+AGG | - | chr8_2:35540950-35540969 | Msa1245440:CDS | 40.0% |
| GCAGCAAGTACTTCTATGAT+TGG | - | chr8_2:35540972-35540991 | Msa1245440:CDS | 40.0% | |
| CTTAGAGACTCAATAGCTTC+TGG | + | chr8_2:35541095-35541114 | None:intergenic | 40.0% | |
| CAGAAGCTATTGAGTCTCTA+AGG | - | chr8_2:35541093-35541112 | Msa1245440:CDS | 40.0% | |
| ! | ATTGAGTCTCTAAGGAAAGC+CGG | - | chr8_2:35541101-35541120 | Msa1245440:CDS | 40.0% |
| GGAAAGCCGGTATTAAAGTA+TGG | - | chr8_2:35541114-35541133 | Msa1245440:CDS | 40.0% | |
| !! | TAAAGTATGGGTGTTGACTG+GGG | - | chr8_2:35541127-35541146 | Msa1245440:CDS | 40.0% |
| TGACGAGTAGCCAATTGATA+TGG | + | chr8_2:35541168-35541187 | None:intergenic | 40.0% | |
| TCGTCAAAGCTACTAACAAG+TGG | - | chr8_2:35541182-35541201 | Msa1245440:CDS | 40.0% | |
| AAAAAATGTAGCTGCACCTG+AGG | - | chr8_2:35541283-35541302 | Msa1245440:CDS | 40.0% | |
| TCAATATAGTTGCCAACCTC+AGG | + | chr8_2:35541302-35541321 | None:intergenic | 40.0% | |
| GAGGTTGGCAACTATATTGA+AGG | - | chr8_2:35541302-35541321 | Msa1245440:intron | 40.0% | |
| ! | TGGAGTTGTTTCAACTCCTA+TGG | - | chr8_2:35541334-35541353 | Msa1245440:intron | 40.0% |
| CCATCAATAATCAACGCCAT+AGG | + | chr8_2:35541353-35541372 | None:intergenic | 40.0% | |
| !! | CCTATGGCGTTGATTATTGA+TGG | - | chr8_2:35541350-35541369 | Msa1245440:intron | 40.0% |
| ! | TGATAGTGAACTGGAAGAAG+AGG | - | chr8_2:35541394-35541413 | Msa1245440:intron | 40.0% |
| CTCTCTCGTAAAGAATAGGA+CGG | - | chr8_2:35541579-35541598 | Msa1245440:CDS | 40.0% | |
| ATGATCCAAATGGCTGATGT+TGG | - | chr8_2:35541824-35541843 | Msa1245440:CDS | 40.0% | |
| TGATCCAAATGGCTGATGTT+GGG | - | chr8_2:35541825-35541844 | Msa1245440:CDS | 40.0% | |
| ! | TGGCTTCAGATTTTGCAATG+GGG | - | chr8_2:35541885-35541904 | Msa1245440:intron | 40.0% |
| ! | ATTTTGCAATGGGGCAGTTT+CGG | - | chr8_2:35541894-35541913 | Msa1245440:intron | 40.0% |
| TGTCCGTGTACAAATAAGAG+AGG | + | chr8_2:35541929-35541948 | None:intergenic | 40.0% | |
| ! | TCTTATTTGTACACGGACAC+TGG | - | chr8_2:35541930-35541949 | Msa1245440:intron | 40.0% |
| TTAAAAGCCACAAAGAGCGA+TGG | + | chr8_2:35542138-35542157 | None:intergenic | 40.0% | |
| ! | TACAGAGTCCTCAGCTTTAT+GGG | - | chr8_2:35542353-35542372 | Msa1245440:CDS | 40.0% |
| AACGCTTTGCCATAACGTAT+CGG | + | chr8_2:35542431-35542450 | None:intergenic | 40.0% | |
| GTTCCTCTCTTTGCATATTG+GGG | - | chr8_2:35542463-35542482 | Msa1245440:CDS | 40.0% | |
| GGATTTCTCATGCATCCATT+TGG | - | chr8_2:35542584-35542603 | Msa1245440:CDS | 40.0% | |
| TTTCTCATGCATCCATTTGG+GGG | - | chr8_2:35542587-35542606 | Msa1245440:CDS | 40.0% | |
| CGCAACTTTCATATGTGTCA+TGG | - | chr8_2:35542618-35542637 | Msa1245440:CDS | 40.0% | |
| GATGCTATACCATCACTTCA+TGG | - | chr8_2:35542646-35542665 | Msa1245440:CDS | 40.0% | |
| TACCATCACTTCATGGTTAC+TGG | - | chr8_2:35542653-35542672 | Msa1245440:CDS | 40.0% | |
| TACCAGTAACCATGAAGTGA+TGG | + | chr8_2:35542658-35542677 | None:intergenic | 40.0% | |
| ATCCAACGCTGTAAAACACA+AGG | - | chr8_2:35542700-35542719 | Msa1245440:CDS | 40.0% | |
| ! | TTCCTTGTGTTTTACAGCGT+TGG | + | chr8_2:35542705-35542724 | None:intergenic | 40.0% |
| GCATGCATGACATGACTAAT+TGG | + | chr8_2:35542754-35542773 | None:intergenic | 40.0% | |
| GTATGGAGAAAACTCTGTTG+GGG | - | chr8_2:35542912-35542931 | Msa1245440:CDS | 40.0% | |
| ACGAGTACTAATCTATGTCG+GGG | + | chr8_2:35542976-35542995 | None:intergenic | 40.0% | |
| GATGCACTGCTAATCCTTTA+TGG | - | chr8_2:35543132-35543151 | Msa1245440:CDS | 40.0% | |
| CACTGCTAATCCTTTATGGA+TGG | - | chr8_2:35543136-35543155 | Msa1245440:CDS | 40.0% | |
| ! | GAACATTTGGAACATGACCT+AGG | + | chr8_2:35543328-35543347 | None:intergenic | 40.0% |
| CAAGCCTAGGATTGAACATT+TGG | + | chr8_2:35543341-35543360 | None:intergenic | 40.0% | |
| TTCAATCCTAGGCTTGAGAA+GGG | - | chr8_2:35543345-35543364 | Msa1245440:CDS | 40.0% | |
| TTGGACAGCACAATGGTCAA+TGG | + | chr8_2:35538073-35538092 | None:intergenic | 45.0% | |
| TGCAGATGTGAAGTGAAAGG+TGG | + | chr8_2:35538190-35538209 | None:intergenic | 45.0% | |
| CACGAAAAGGAGAGGTTTAG+TGG | - | chr8_2:35539220-35539239 | Msa1245440:intron | 45.0% | |
| TGGATTTCAGGCTACAATGG+AGG | - | chr8_2:35539279-35539298 | Msa1245440:intron | 45.0% | |
| !! | GTTGGTGTTGCTGTGTATTG+TGG | - | chr8_2:35539379-35539398 | Msa1245440:CDS | 45.0% |
| ! | CTTCAGTTTGTGCTGCTGTT+TGG | - | chr8_2:35539524-35539543 | Msa1245440:CDS | 45.0% |
| CCGACATGAGGAATGTGAAA+AGG | + | chr8_2:35539657-35539676 | None:intergenic | 45.0% | |
| AGGATATCGGGATCATAACC+TGG | + | chr8_2:35539690-35539709 | None:intergenic | 45.0% | |
| ! | TCTATGGAGCTTGTTCGTGT+TGG | - | chr8_2:35539718-35539737 | Msa1245440:CDS | 45.0% |
| CACTCTGACTGAGAACAAGA+TGG | - | chr8_2:35539870-35539889 | Msa1245440:intron | 45.0% | |
| ! | AACTTGCTCATTCTCAAGGC+TGG | + | chr8_2:35539944-35539963 | None:intergenic | 45.0% |
| TCGGATGTGTCAACAACAAG+AGG | + | chr8_2:35540290-35540309 | None:intergenic | 45.0% | |
| TATCAGCTTGACTGTAGGGT+CGG | + | chr8_2:35540309-35540328 | None:intergenic | 45.0% | |
| ATGCTTATAGAGCGAACCTC+AGG | - | chr8_2:35540392-35540411 | Msa1245440:intron | 45.0% | |
| TTGAAGGAGTTAAGGAGCTG+GGG | + | chr8_2:35540613-35540632 | None:intergenic | 45.0% | |
| GTTGAAGGAGTTAAGGAGCT+GGG | + | chr8_2:35540614-35540633 | None:intergenic | 45.0% | |
| AGTTGAAGGAGTTAAGGAGC+TGG | + | chr8_2:35540615-35540634 | None:intergenic | 45.0% | |
| TCAAGGGCTAAAGCAGTTGA+AGG | + | chr8_2:35540629-35540648 | None:intergenic | 45.0% | |
| GCTATGCAGGTTCAATGTCT+TGG | - | chr8_2:35540695-35540714 | Msa1245440:CDS | 45.0% | |
| ! | GAAACTTTTCGTCAAAGGGG+CGG | - | chr8_2:35540785-35540804 | Msa1245440:CDS | 45.0% |
| !! | GGTTTGAGGACGCTTGTTAT+TGG | - | chr8_2:35540897-35540916 | Msa1245440:CDS | 45.0% |
| !! | AGAAGTACTTGCTGCCTCAA+AGG | + | chr8_2:35540967-35540986 | None:intergenic | 45.0% |
| GTCGTGTAGAAGACGTTTAC+AGG | - | chr8_2:35541241-35541260 | Msa1245440:CDS | 45.0% | |
| AGAGCTGGAATCAACAGCAT+TGG | + | chr8_2:35541489-35541508 | None:intergenic | 45.0% | |
| TTCGTGCAAGTTCAAAGAGC+TGG | + | chr8_2:35541504-35541523 | None:intergenic | 45.0% | |
| ! | ACAATCCCAGCCTTTTGCAA+CGG | + | chr8_2:35541559-35541578 | None:intergenic | 45.0% |
| AGATACCATACCATCTCCGA+TGG | + | chr8_2:35541620-35541639 | None:intergenic | 45.0% | |
| GATCCAAATGGCTGATGTTG+GGG | - | chr8_2:35541826-35541845 | Msa1245440:CDS | 45.0% | |
| CACTGGAATTACCAACGACT+AGG | - | chr8_2:35541947-35541966 | Msa1245440:intron | 45.0% | |
| TTACCAACGACTAGGCTACA+TGG | - | chr8_2:35541955-35541974 | Msa1245440:intron | 45.0% | |
| ACTATGACCATCGCTCTTTG+TGG | - | chr8_2:35542128-35542147 | Msa1245440:CDS | 45.0% | |
| CTACAGAGTCCTCAGCTTTA+TGG | - | chr8_2:35542352-35542371 | Msa1245440:CDS | 45.0% | |
| ! | ACAGAGTCCTCAGCTTTATG+GGG | - | chr8_2:35542354-35542373 | Msa1245440:CDS | 45.0% |
| TGACGATAGCCGATACGTTA+TGG | - | chr8_2:35542419-35542438 | Msa1245440:CDS | 45.0% | |
| CTTCCCCAATATGCAAAGAG+AGG | + | chr8_2:35542469-35542488 | None:intergenic | 45.0% | |
| TAGCAAGTATGGGGGATCTT+TGG | - | chr8_2:35542500-35542519 | Msa1245440:CDS | 45.0% | |
| ACTTGGCCATGGATGTAATC+AGG | - | chr8_2:35542554-35542573 | Msa1245440:CDS | 45.0% | |
| AGTCCACCTGATTACATCCA+TGG | + | chr8_2:35542563-35542582 | None:intergenic | 45.0% | |
| ! | TGGATGTAATCAGGTGGACT+TGG | - | chr8_2:35542563-35542582 | Msa1245440:CDS | 45.0% |
| CAGAGTCACCAACATGTGAT+AGG | - | chr8_2:35542839-35542858 | Msa1245440:CDS | 45.0% | |
| CACTCTGACCTATCACATGT+TGG | + | chr8_2:35542850-35542869 | None:intergenic | 45.0% | |
| CAACATGTGATAGGTCAGAG+TGG | - | chr8_2:35542848-35542867 | Msa1245440:CDS | 45.0% | |
| GTGATAGGTCAGAGTGGTAA+CGG | - | chr8_2:35542854-35542873 | Msa1245440:CDS | 45.0% | |
| TGATAGGTCAGAGTGGTAAC+GGG | - | chr8_2:35542855-35542874 | Msa1245440:CDS | 45.0% | |
| AGAAAACTCTGTTGGGGTGA+GGG | - | chr8_2:35542918-35542937 | Msa1245440:CDS | 45.0% | |
| ATACGTAGATGGAAGGCAAG+CGG | - | chr8_2:35543102-35543121 | Msa1245440:CDS | 45.0% | |
| CTAGGTGGTCCAATAAGACT+AGG | + | chr8_2:35543310-35543329 | None:intergenic | 45.0% | |
| !! | CTAGTCTTATTGGACCACCT+AGG | - | chr8_2:35543308-35543327 | Msa1245440:CDS | 45.0% |
| ! | CATTTGGAACATGACCTAGG+TGG | + | chr8_2:35543325-35543344 | None:intergenic | 45.0% |
| GTTCAATCCTAGGCTTGAGA+AGG | - | chr8_2:35543344-35543363 | Msa1245440:CDS | 45.0% | |
| GTTGAGAGTTCCACATTGGA+TGG | - | chr8_2:35543371-35543390 | Msa1245440:CDS | 45.0% | |
| TTGCAGGGCTATCTTTGATG+TGG | - | chr8_2:35543479-35543498 | Msa1245440:CDS | 45.0% | |
| TGGCAAGCACCACATTATTC+TGG | - | chr8_2:35543499-35543518 | Msa1245440:CDS | 45.0% | |
| TTGTCGACGAGTGATCCTAC+CGG | - | chr8_2:35539112-35539131 | Msa1245440:intron | 50.0% | |
| TGAACATACGCAACACCGGT+AGG | + | chr8_2:35539130-35539149 | None:intergenic | 50.0% | |
| CAGGCTACAATGGAGGTTGA+TGG | - | chr8_2:35539286-35539305 | Msa1245440:intron | 50.0% | |
| TCAAGACGGCTCCTCTTAGA+CGG | + | chr8_2:35539442-35539461 | None:intergenic | 50.0% | |
| ! | GCTCTCATTTTGGGCTATGC+AGG | - | chr8_2:35540682-35540701 | Msa1245440:CDS | 50.0% |
| !! | GGACGCTTGTTATTGGGATG+CGG | - | chr8_2:35540904-35540923 | Msa1245440:CDS | 50.0% |
| !! | GACGCTTGTTATTGGGATGC+GGG | - | chr8_2:35540905-35540924 | Msa1245440:CDS | 50.0% |
| AATGTAGCTGCACCTGAGGT+TGG | - | chr8_2:35541287-35541306 | Msa1245440:CDS | 50.0% | |
| TCGAGTAGCTCCGTTGCAAA+AGG | - | chr8_2:35541546-35541565 | Msa1245440:intron | 50.0% | |
| TAGCTCCGTTGCAAAAGGCT+GGG | - | chr8_2:35541551-35541570 | Msa1245440:intron | 50.0% | |
| TCCGATGGCTAGAGTCATGT+CGG | + | chr8_2:35541605-35541624 | None:intergenic | 50.0% | |
| ATGACTCTAGCCATCGGAGA+TGG | - | chr8_2:35541607-35541626 | Msa1245440:CDS | 50.0% | |
| TCTAGCCATCGGAGATGGTA+TGG | - | chr8_2:35541612-35541631 | Msa1245440:CDS | 50.0% | |
| CAACCCCAACATCAGCCATT+TGG | + | chr8_2:35541832-35541851 | None:intergenic | 50.0% | |
| CAAATGGCTGATGTTGGGGT+TGG | - | chr8_2:35541830-35541849 | Msa1245440:CDS | 50.0% | |
| GTTGTGTGTCTTTGTCTGCC+AGG | - | chr8_2:35542194-35542213 | Msa1245440:CDS | 50.0% | |
| GGCAGTGAAGAGAACATACC+TGG | + | chr8_2:35542215-35542234 | None:intergenic | 50.0% | |
| GGTCAATTTGCACTTGGCCA+TGG | - | chr8_2:35542543-35542562 | Msa1245440:CDS | 50.0% | |
| TGGCCATGGATGTAATCAGG+TGG | - | chr8_2:35542557-35542576 | Msa1245440:CDS | 50.0% | |
| TGCGATGATAGACCCCCAAA+TGG | + | chr8_2:35542602-35542621 | None:intergenic | 50.0% | |
| GAGAAAACTCTGTTGGGGTG+AGG | - | chr8_2:35542917-35542936 | Msa1245440:CDS | 50.0% | |
| ACCTGTTGGATGCACAAGGT+GGG | + | chr8_2:35542952-35542971 | None:intergenic | 50.0% | |
| AACCTGTTGGATGCACAAGG+TGG | + | chr8_2:35542953-35542972 | None:intergenic | 50.0% | |
| ATCTATGTCGGGGAACCTGT+TGG | + | chr8_2:35542966-35542985 | None:intergenic | 50.0% | |
| CTCGTTAATTGGTGTGGCAG+TGG | - | chr8_2:35542991-35543010 | Msa1245440:CDS | 50.0% | |
| GCGTGTTGAGAGTTCCACAT+TGG | - | chr8_2:35543367-35543386 | Msa1245440:CDS | 50.0% | |
| ACTCAGGAGCTCCGTCTAAG+AGG | - | chr8_2:35539428-35539447 | Msa1245440:CDS | 55.0% | |
| ! | GGAGCTTGTTCGTGTTGGTC+AGG | - | chr8_2:35539723-35539742 | Msa1245440:CDS | 55.0% |
| ACATATGCTGCCGCTGCCTA+TGG | - | chr8_2:35540365-35540384 | Msa1245440:intron | 55.0% | |
| ! | TAGGGCTGCTTTGCTTCGCA+AGG | - | chr8_2:35540995-35541014 | Msa1245440:CDS | 55.0% |
| CGGTAGCGCCCAATATGCAT+AGG | + | chr8_2:35541043-35541062 | None:intergenic | 55.0% | |
| GTAGCTCCGTTGCAAAAGGC+TGG | - | chr8_2:35541550-35541569 | Msa1245440:intron | 55.0% | |
| GCCGACATGACTCTAGCCAT+CGG | - | chr8_2:35541601-35541620 | Msa1245440:CDS | 55.0% | |
| ! | GATGTTGGGGTTGGCATCAG+TGG | - | chr8_2:35541839-35541858 | Msa1245440:CDS | 55.0% |
| GTTGGCATCAGTGGTCAGGA+GGG | - | chr8_2:35541848-35541867 | Msa1245440:CDS | 55.0% | |
| GGAGGGTAGGCAAGCTGTAA+TGG | - | chr8_2:35541865-35541884 | Msa1245440:intron | 55.0% | |
| GCACCATGTAGCCTAGTCGT+TGG | + | chr8_2:35541961-35541980 | None:intergenic | 55.0% | |
| ! | AGTCCTCAGCTTTATGGGGC+TGG | - | chr8_2:35542358-35542377 | Msa1245440:CDS | 55.0% |
| TGTCCAGCCCCATAAAGCTG+AGG | + | chr8_2:35542364-35542383 | None:intergenic | 55.0% | |
| TGGGGCTGGACAAAGACAAG+AGG | - | chr8_2:35542372-35542391 | Msa1245440:CDS | 55.0% | |
| !! | GAGTGGTAACGGGAAGCAAG+TGG | - | chr8_2:35542865-35542884 | Msa1245440:CDS | 55.0% |
| AAACTCTGTTGGGGTGAGGG+TGG | - | chr8_2:35542921-35542940 | Msa1245440:CDS | 55.0% | |
| AACTCTGTTGGGGTGAGGGT+GGG | - | chr8_2:35542922-35542941 | Msa1245440:CDS | 55.0% | |
| ACCCACCTTGTGCATCCAAC+AGG | - | chr8_2:35542948-35542967 | Msa1245440:CDS | 55.0% | |
| GGGAACCTGTTGGATGCACA+AGG | + | chr8_2:35542956-35542975 | None:intergenic | 55.0% | |
| AACACGCCCTTCTCAAGCCT+AGG | + | chr8_2:35543354-35543373 | None:intergenic | 55.0% | |
| !! | GCAGGGAATTCGGTTCGGAC+CGG | - | chr8_2:35538746-35538765 | Msa1245440:intron | 60.0% |
| ! | TGGGGTTGGCATCAGTGGTC+AGG | - | chr8_2:35541844-35541863 | Msa1245440:CDS | 60.0% |
| GGTTGGCATCAGTGGTCAGG+AGG | - | chr8_2:35541847-35541866 | Msa1245440:CDS | 60.0% | |
| GCATCAGTGGTCAGGAGGGT+AGG | - | chr8_2:35541852-35541871 | Msa1245440:CDS | 60.0% | |
| TCTGTTGGGGTGAGGGTGGG+AGG | - | chr8_2:35542925-35542944 | Msa1245440:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 35538061 | 35543963 | 35538061 | ID=Msa1245440;Name=Msa1245440 |
| chr8_2 | mRNA | 35538061 | 35543963 | 35538061 | ID=Msa1245440-mRNA-1;Parent=Msa1245440;Name=Msa1245440-mRNA-1;_AED=0.06;_eAED=0.06;_QI=424|1|1|1|1|1|7|262|1177 |
| chr8_2 | exon | 35538061 | 35538539 | 35538061 | ID=Msa1245440-mRNA-1:exon:11275;Parent=Msa1245440-mRNA-1 |
| chr8_2 | exon | 35539350 | 35539808 | 35539350 | ID=Msa1245440-mRNA-1:exon:11274;Parent=Msa1245440-mRNA-1 |
| chr8_2 | exon | 35539998 | 35540217 | 35539998 | ID=Msa1245440-mRNA-1:exon:11273;Parent=Msa1245440-mRNA-1 |
| chr8_2 | exon | 35540396 | 35540519 | 35540396 | ID=Msa1245440-mRNA-1:exon:11272;Parent=Msa1245440-mRNA-1 |
| chr8_2 | exon | 35540609 | 35541320 | 35540609 | ID=Msa1245440-mRNA-1:exon:11271;Parent=Msa1245440-mRNA-1 |
| chr8_2 | exon | 35541574 | 35541880 | 35541574 | ID=Msa1245440-mRNA-1:exon:11270;Parent=Msa1245440-mRNA-1 |
| chr8_2 | exon | 35542045 | 35543963 | 35542045 | ID=Msa1245440-mRNA-1:exon:11269;Parent=Msa1245440-mRNA-1 |
| chr8_2 | five_prime_UTR | 35543540 | 35543963 | 35543540 | ID=Msa1245440-mRNA-1:five_prime_utr;Parent=Msa1245440-mRNA-1 |
| chr8_2 | CDS | 35542045 | 35543539 | 35542045 | ID=Msa1245440-mRNA-1:cds;Parent=Msa1245440-mRNA-1 |
| chr8_2 | CDS | 35541574 | 35541880 | 35541574 | ID=Msa1245440-mRNA-1:cds;Parent=Msa1245440-mRNA-1 |
| chr8_2 | CDS | 35540609 | 35541320 | 35540609 | ID=Msa1245440-mRNA-1:cds;Parent=Msa1245440-mRNA-1 |
| chr8_2 | CDS | 35540396 | 35540519 | 35540396 | ID=Msa1245440-mRNA-1:cds;Parent=Msa1245440-mRNA-1 |
| chr8_2 | CDS | 35539998 | 35540217 | 35539998 | ID=Msa1245440-mRNA-1:cds;Parent=Msa1245440-mRNA-1 |
| chr8_2 | CDS | 35539350 | 35539808 | 35539350 | ID=Msa1245440-mRNA-1:cds;Parent=Msa1245440-mRNA-1 |
| chr8_2 | CDS | 35538323 | 35538539 | 35538323 | ID=Msa1245440-mRNA-1:cds;Parent=Msa1245440-mRNA-1 |
| chr8_2 | three_prime_UTR | 35538061 | 35538322 | 35538061 | ID=Msa1245440-mRNA-1:three_prime_utr;Parent=Msa1245440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
