Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0050870 | sp|Q96512|PER9_ARATH | 77.483 | 302 | 68 | 0 | 5 | 306 | 45 | 346 | 1.54e-171 | 481 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0050870 | G8A1S1 | 98.693 | 306 | 4 | 0 | 1 | 306 | 42 | 347 | 0.0 | 623 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024650 | Msa0050870 | 0.800601 | 1.334919e-48 | -8.615850e-47 |
| Msa0050870 | Msa0120450 | 0.803717 | 3.050733e-49 | -8.615850e-47 |
| Msa0050870 | Msa0146590 | 0.959695 | 1.000850e-117 | -8.615850e-47 |
| Msa0050870 | Msa0303900 | 0.803089 | 4.117942e-49 | -8.615850e-47 |
| Msa0050870 | Msa0333770 | 0.823531 | 1.317570e-53 | -8.615850e-47 |
| Msa0050870 | Msa0547370 | 0.806347 | 8.598120e-50 | -8.615850e-47 |
| Msa0050870 | Msa0567330 | 0.808082 | 3.688344e-50 | -8.615850e-47 |
| Msa0050870 | Msa0567570 | 0.801187 | 1.013492e-48 | -8.615850e-47 |
| Msa0050870 | Msa0638300 | -0.801295 | 9.629814e-49 | -8.615850e-47 |
| Msa0050870 | Msa0906680 | 0.816252 | 6.087286e-52 | -8.615850e-47 |
| Msa0050870 | Msa0975950 | 0.812307 | 4.527665e-51 | -8.615850e-47 |
| Msa0050870 | Msa1227070 | 0.976034 | 4.632636e-141 | -8.615850e-47 |
| Msa0050870 | Msa1241960 | 0.801174 | 1.019837e-48 | -8.615850e-47 |
| Msa0050870 | Msa1281780 | 0.816667 | 4.913591e-52 | -8.615850e-47 |
| Msa0050870 | Msa1283070 | 0.800710 | 1.268595e-48 | -8.615850e-47 |
| Msa0050870 | Msa1321010 | 0.805010 | 1.641142e-49 | -8.615850e-47 |
| Msa0050870 | Msa1407810 | 0.811337 | 7.363337e-51 | -8.615850e-47 |
| Msa0050870 | Msa1433360 | 0.810553 | 1.088701e-50 | -8.615850e-47 |
| Msa0050870 | Msa1437780 | 0.812697 | 3.720793e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0050870 | MtrunA17_Chr1g0155611 | 98.693 | 306 | 4 | 0 | 1 | 306 | 42 | 347 | 0.0 | 623 |
| Msa0050870 | MtrunA17_Chr8g0372601 | 64.052 | 306 | 109 | 1 | 1 | 306 | 26 | 330 | 1.34e-142 | 405 |
| Msa0050870 | MtrunA17_Chr5g0404721 | 62.252 | 302 | 113 | 1 | 5 | 306 | 30 | 330 | 9.49e-139 | 395 |
| Msa0050870 | MtrunA17_Chr3g0114451 | 52.980 | 302 | 133 | 2 | 5 | 306 | 26 | 318 | 6.26e-111 | 324 |
| Msa0050870 | MtrunA17_Chr5g0400331 | 52.614 | 306 | 141 | 2 | 5 | 306 | 26 | 331 | 7.24e-109 | 319 |
| Msa0050870 | MtrunA17_Chr3g0106921 | 52.787 | 305 | 132 | 4 | 5 | 306 | 25 | 320 | 1.60e-108 | 318 |
| Msa0050870 | MtrunA17_Chr4g0068621 | 51.987 | 302 | 142 | 2 | 5 | 306 | 38 | 336 | 3.56e-108 | 318 |
| Msa0050870 | MtrunA17_Chr5g0432441 | 52.941 | 306 | 131 | 4 | 5 | 306 | 30 | 326 | 1.67e-107 | 315 |
| Msa0050870 | MtrunA17_Chr4g0013171 | 51.475 | 305 | 137 | 4 | 4 | 306 | 26 | 321 | 2.72e-107 | 315 |
| Msa0050870 | MtrunA17_Chr3g0129051 | 50.329 | 304 | 140 | 3 | 5 | 306 | 28 | 322 | 1.28e-106 | 313 |
| Msa0050870 | MtrunA17_Chr2g0320061 | 51.656 | 302 | 138 | 2 | 5 | 306 | 25 | 318 | 1.32e-105 | 310 |
| Msa0050870 | MtrunA17_Chr2g0320051 | 51.656 | 302 | 138 | 2 | 5 | 306 | 25 | 318 | 1.41e-105 | 310 |
| Msa0050870 | MtrunA17_Chr7g0244461 | 47.386 | 306 | 152 | 2 | 1 | 306 | 16 | 312 | 1.80e-104 | 307 |
| Msa0050870 | MtrunA17_Chr2g0320071 | 50.331 | 302 | 141 | 2 | 5 | 306 | 25 | 317 | 5.98e-104 | 306 |
| Msa0050870 | MtrunA17_Chr2g0292241 | 49.007 | 302 | 154 | 0 | 5 | 306 | 29 | 330 | 1.87e-103 | 306 |
| Msa0050870 | MtrunA17_Chr4g0013181 | 51.667 | 300 | 134 | 4 | 9 | 306 | 63 | 353 | 2.35e-103 | 306 |
| Msa0050870 | MtrunA17_Chr2g0320031 | 50.000 | 302 | 143 | 2 | 5 | 306 | 26 | 319 | 2.72e-103 | 305 |
| Msa0050870 | MtrunA17_Chr2g0292091 | 48.675 | 302 | 155 | 0 | 5 | 306 | 24 | 325 | 3.81e-103 | 305 |
| Msa0050870 | MtrunA17_Chr2g0292251 | 49.338 | 302 | 153 | 0 | 5 | 306 | 28 | 329 | 4.28e-103 | 305 |
| Msa0050870 | MtrunA17_Chr7g0258811 | 48.185 | 303 | 156 | 1 | 5 | 306 | 69 | 371 | 5.14e-103 | 306 |
| Msa0050870 | MtrunA17_Chr5g0438021 | 49.013 | 304 | 144 | 3 | 5 | 306 | 31 | 325 | 1.43e-102 | 303 |
| Msa0050870 | MtrunA17_Chr1g0175561 | 48.515 | 303 | 155 | 1 | 5 | 306 | 24 | 326 | 1.63e-102 | 303 |
| Msa0050870 | MtrunA17_Chr2g0292211 | 48.344 | 302 | 156 | 0 | 5 | 306 | 40 | 341 | 3.08e-102 | 303 |
| Msa0050870 | MtrunA17_Chr2g0292151 | 49.007 | 302 | 154 | 0 | 5 | 306 | 29 | 330 | 4.59e-102 | 303 |
| Msa0050870 | MtrunA17_Chr4g0013201 | 50.000 | 302 | 142 | 2 | 5 | 306 | 46 | 338 | 5.21e-102 | 302 |
| Msa0050870 | MtrunA17_Chr2g0292111 | 49.338 | 302 | 153 | 0 | 5 | 306 | 29 | 330 | 1.59e-101 | 301 |
| Msa0050870 | MtrunA17_Chr2g0320101 | 49.669 | 302 | 143 | 2 | 5 | 306 | 25 | 317 | 1.67e-101 | 300 |
| Msa0050870 | MtrunA17_Chr2g0292101 | 48.344 | 302 | 156 | 0 | 5 | 306 | 25 | 326 | 2.75e-101 | 300 |
| Msa0050870 | MtrunA17_Chr4g0013191 | 49.508 | 305 | 142 | 4 | 5 | 306 | 45 | 340 | 3.61e-101 | 300 |
| Msa0050870 | MtrunA17_Chr2g0292271 | 48.344 | 302 | 156 | 0 | 5 | 306 | 29 | 330 | 8.77e-101 | 299 |
| Msa0050870 | MtrunA17_Chr2g0299691 | 49.191 | 309 | 152 | 2 | 1 | 306 | 52 | 358 | 2.02e-100 | 299 |
| Msa0050870 | MtrunA17_Chr2g0292261 | 48.675 | 302 | 155 | 0 | 5 | 306 | 29 | 330 | 3.46e-100 | 298 |
| Msa0050870 | MtrunA17_Chr2g0292291 | 49.013 | 304 | 152 | 2 | 5 | 306 | 30 | 332 | 4.84e-100 | 297 |
| Msa0050870 | MtrunA17_Chr7g0244451 | 49.677 | 310 | 139 | 4 | 1 | 306 | 20 | 316 | 7.42e-100 | 296 |
| Msa0050870 | MtrunA17_Chr3g0129061 | 49.013 | 304 | 144 | 3 | 5 | 306 | 28 | 322 | 7.50e-100 | 296 |
| Msa0050870 | MtrunA17_Chr5g0432351 | 47.869 | 305 | 148 | 4 | 5 | 306 | 25 | 321 | 3.19e-99 | 294 |
| Msa0050870 | MtrunA17_Chr3g0129041 | 49.342 | 304 | 143 | 3 | 5 | 306 | 28 | 322 | 9.18e-99 | 293 |
| Msa0050870 | MtrunA17_Chr4g0070951 | 48.355 | 304 | 153 | 2 | 5 | 306 | 28 | 329 | 1.05e-98 | 293 |
| Msa0050870 | MtrunA17_Chr2g0292181 | 47.020 | 302 | 160 | 0 | 5 | 306 | 38 | 339 | 1.07e-98 | 294 |
| Msa0050870 | MtrunA17_Chr5g0402571 | 51.171 | 299 | 142 | 3 | 9 | 306 | 31 | 326 | 1.14e-98 | 293 |
| Msa0050870 | MtrunA17_Chr2g0320091 | 49.175 | 303 | 144 | 3 | 5 | 306 | 25 | 318 | 1.34e-98 | 293 |
| Msa0050870 | MtrunA17_Chr5g0432341 | 47.541 | 305 | 149 | 4 | 5 | 306 | 25 | 321 | 1.82e-98 | 292 |
| Msa0050870 | MtrunA17_Chr2g0291751 | 49.007 | 302 | 154 | 0 | 5 | 306 | 29 | 330 | 2.08e-98 | 293 |
| Msa0050870 | MtrunA17_Chr7g0224371 | 48.658 | 298 | 143 | 3 | 9 | 306 | 35 | 322 | 2.20e-97 | 290 |
| Msa0050870 | MtrunA17_Chr5g0421411 | 48.070 | 285 | 145 | 3 | 25 | 306 | 1 | 285 | 6.41e-97 | 287 |
| Msa0050870 | MtrunA17_Chr5g0432331 | 47.869 | 305 | 148 | 4 | 5 | 306 | 56 | 352 | 7.71e-97 | 289 |
| Msa0050870 | MtrunA17_Chr5g0402581 | 50.167 | 299 | 145 | 3 | 9 | 306 | 31 | 326 | 4.30e-96 | 286 |
| Msa0050870 | MtrunA17_Chr4g0038151 | 47.213 | 305 | 150 | 3 | 5 | 306 | 25 | 321 | 3.33e-95 | 284 |
| Msa0050870 | MtrunA17_Chr4g0013721 | 47.682 | 302 | 153 | 3 | 5 | 306 | 100 | 396 | 7.14e-95 | 286 |
| Msa0050870 | MtrunA17_Chr4g0038161 | 47.213 | 305 | 150 | 3 | 5 | 306 | 24 | 320 | 1.09e-94 | 283 |
| Msa0050870 | MtrunA17_Chr4g0043391 | 46.557 | 305 | 153 | 3 | 5 | 306 | 27 | 324 | 2.75e-94 | 282 |
| Msa0050870 | MtrunA17_Chr1g0213061 | 46.711 | 304 | 151 | 4 | 5 | 306 | 27 | 321 | 3.59e-94 | 282 |
| Msa0050870 | MtrunA17_Chr4g0013821 | 46.557 | 305 | 158 | 3 | 2 | 306 | 25 | 324 | 4.82e-94 | 282 |
| Msa0050870 | MtrunA17_Chr3g0106901 | 48.013 | 302 | 148 | 2 | 5 | 306 | 31 | 323 | 2.67e-93 | 279 |
| Msa0050870 | MtrunA17_Chr4g0038171 | 46.230 | 305 | 154 | 3 | 5 | 306 | 24 | 321 | 5.54e-93 | 278 |
| Msa0050870 | MtrunA17_Chr3g0107881 | 44.918 | 305 | 158 | 3 | 5 | 306 | 27 | 324 | 5.22e-90 | 271 |
| Msa0050870 | MtrunA17_Chr1g0204011 | 45.033 | 302 | 160 | 5 | 5 | 306 | 27 | 322 | 3.51e-84 | 256 |
| Msa0050870 | MtrunA17_Chr5g0405991 | 44.771 | 306 | 155 | 7 | 4 | 306 | 22 | 316 | 8.72e-83 | 252 |
| Msa0050870 | MtrunA17_Chr3g0128061 | 43.813 | 299 | 165 | 3 | 9 | 306 | 30 | 326 | 1.57e-82 | 252 |
| Msa0050870 | MtrunA17_Chr6g0477071 | 43.564 | 303 | 158 | 7 | 4 | 306 | 53 | 342 | 1.61e-81 | 250 |
| Msa0050870 | MtrunA17_Chr2g0322861 | 45.333 | 300 | 158 | 5 | 9 | 306 | 91 | 386 | 2.68e-81 | 251 |
| Msa0050870 | MtrunA17_Chr8g0371381 | 42.951 | 305 | 160 | 7 | 5 | 306 | 26 | 319 | 2.08e-80 | 246 |
| Msa0050870 | MtrunA17_Chr4g0076211 | 44.295 | 298 | 155 | 6 | 10 | 306 | 46 | 333 | 4.26e-80 | 246 |
| Msa0050870 | MtrunA17_Chr1g0188431 | 42.053 | 302 | 162 | 6 | 5 | 306 | 39 | 327 | 5.44e-80 | 245 |
| Msa0050870 | MtrunA17_Chr1g0194151 | 43.377 | 302 | 165 | 3 | 9 | 306 | 34 | 333 | 5.58e-79 | 243 |
| Msa0050870 | MtrunA17_Chr2g0279041 | 43.709 | 302 | 159 | 5 | 9 | 306 | 31 | 325 | 7.86e-79 | 242 |
| Msa0050870 | MtrunA17_Chr4g0024121 | 42.244 | 303 | 171 | 3 | 5 | 306 | 27 | 326 | 2.82e-78 | 241 |
| Msa0050870 | MtrunA17_Chr5g0432401 | 42.105 | 304 | 126 | 4 | 5 | 305 | 29 | 285 | 5.52e-77 | 236 |
| Msa0050870 | MtrunA17_Chr1g0157051 | 42.810 | 306 | 166 | 6 | 1 | 305 | 20 | 317 | 1.20e-76 | 236 |
| Msa0050870 | MtrunA17_Chr1g0164891 | 42.384 | 302 | 168 | 5 | 9 | 306 | 93 | 392 | 1.41e-76 | 239 |
| Msa0050870 | MtrunA17_Chr1g0194271 | 41.456 | 316 | 172 | 4 | 2 | 306 | 27 | 340 | 1.66e-76 | 237 |
| Msa0050870 | MtrunA17_Chr7g0268501 | 42.715 | 302 | 167 | 4 | 5 | 306 | 25 | 320 | 1.13e-75 | 234 |
| Msa0050870 | MtrunA17_Chr7g0268521 | 42.715 | 302 | 167 | 4 | 5 | 306 | 25 | 320 | 1.13e-75 | 234 |
| Msa0050870 | MtrunA17_Chr7g0254201 | 42.617 | 298 | 162 | 6 | 9 | 306 | 24 | 312 | 2.39e-75 | 233 |
| Msa0050870 | MtrunA17_Chr2g0296621 | 42.904 | 303 | 161 | 8 | 5 | 306 | 50 | 341 | 2.85e-74 | 231 |
| Msa0050870 | MtrunA17_Chr6g0460711 | 42.667 | 300 | 160 | 6 | 9 | 306 | 25 | 314 | 3.54e-74 | 230 |
| Msa0050870 | MtrunA17_Chr4g0075241 | 39.297 | 313 | 178 | 5 | 1 | 306 | 20 | 327 | 1.42e-71 | 224 |
| Msa0050870 | MtrunA17_Chr7g0254231 | 41.060 | 302 | 166 | 6 | 5 | 306 | 22 | 311 | 6.73e-71 | 222 |
| Msa0050870 | MtrunA17_Chr4g0063671 | 42.997 | 307 | 163 | 5 | 5 | 306 | 21 | 320 | 7.02e-71 | 222 |
| Msa0050870 | MtrunA17_Chr6g0467161 | 41.830 | 306 | 162 | 6 | 4 | 306 | 44 | 336 | 1.87e-70 | 221 |
| Msa0050870 | MtrunA17_Chr7g0225221 | 38.511 | 309 | 170 | 4 | 5 | 306 | 25 | 320 | 3.26e-70 | 220 |
| Msa0050870 | MtrunA17_Chr4g0046131 | 40.264 | 303 | 174 | 5 | 5 | 302 | 42 | 342 | 1.20e-69 | 219 |
| Msa0050870 | MtrunA17_Chr2g0316791 | 40.841 | 333 | 162 | 7 | 5 | 305 | 76 | 405 | 1.21e-68 | 219 |
| Msa0050870 | MtrunA17_Chr2g0316831 | 40.541 | 333 | 163 | 7 | 5 | 305 | 112 | 441 | 2.92e-67 | 216 |
| Msa0050870 | MtrunA17_Chr2g0316481 | 40.240 | 333 | 164 | 7 | 5 | 305 | 76 | 405 | 7.70e-67 | 214 |
| Msa0050870 | MtrunA17_Chr2g0316191 | 40.120 | 334 | 164 | 7 | 5 | 305 | 76 | 406 | 2.96e-66 | 213 |
| Msa0050870 | MtrunA17_Chr2g0311251 | 39.640 | 333 | 165 | 7 | 5 | 305 | 11 | 339 | 1.54e-65 | 209 |
| Msa0050870 | MtrunA17_Chr6g0467121 | 40.656 | 305 | 165 | 7 | 4 | 306 | 73 | 363 | 4.37e-65 | 209 |
| Msa0050870 | MtrunA17_Chr1g0148021 | 36.721 | 305 | 187 | 4 | 5 | 306 | 27 | 328 | 9.20e-64 | 204 |
| Msa0050870 | MtrunA17_Chr5g0401431 | 36.213 | 301 | 187 | 3 | 5 | 302 | 27 | 325 | 1.23e-63 | 204 |
| Msa0050870 | MtrunA17_Chr2g0329641 | 36.482 | 307 | 183 | 4 | 5 | 306 | 36 | 335 | 2.08e-63 | 203 |
| Msa0050870 | MtrunA17_Chr8g0364291 | 39.344 | 305 | 179 | 5 | 5 | 306 | 23 | 324 | 3.00e-63 | 202 |
| Msa0050870 | MtrunA17_Chr6g0467251 | 39.667 | 300 | 170 | 5 | 4 | 302 | 35 | 324 | 1.24e-62 | 201 |
| Msa0050870 | MtrunA17_Chr4g0053871 | 37.542 | 301 | 178 | 4 | 5 | 302 | 27 | 320 | 7.28e-62 | 199 |
| Msa0050870 | MtrunA17_Chr3g0136751 | 39.145 | 304 | 177 | 4 | 5 | 306 | 25 | 322 | 7.74e-62 | 199 |
| Msa0050870 | MtrunA17_Chr2g0311241 | 35.829 | 374 | 163 | 7 | 5 | 305 | 60 | 429 | 5.44e-61 | 200 |
| Msa0050870 | MtrunA17_Chr1g0181431 | 39.016 | 305 | 175 | 4 | 5 | 306 | 27 | 323 | 6.21e-61 | 196 |
| Msa0050870 | MtrunA17_Chr4g0072091 | 37.582 | 306 | 181 | 5 | 5 | 306 | 24 | 323 | 9.64e-61 | 196 |
| Msa0050870 | MtrunA17_Chr1g0197411 | 37.049 | 305 | 187 | 4 | 5 | 306 | 28 | 330 | 1.39e-60 | 196 |
| Msa0050870 | MtrunA17_Chr2g0278671 | 40.836 | 311 | 156 | 8 | 9 | 306 | 28 | 323 | 2.51e-60 | 195 |
| Msa0050870 | MtrunA17_Chr2g0279061 | 41.985 | 262 | 141 | 5 | 49 | 306 | 12 | 266 | 4.79e-60 | 192 |
| Msa0050870 | MtrunA17_Chr1g0181511 | 38.033 | 305 | 178 | 4 | 5 | 306 | 27 | 323 | 8.66e-60 | 194 |
| Msa0050870 | MtrunA17_Chr1g0181481 | 38.870 | 301 | 173 | 4 | 9 | 306 | 31 | 323 | 6.64e-58 | 189 |
| Msa0050870 | MtrunA17_Chr5g0413051 | 37.500 | 304 | 181 | 7 | 9 | 306 | 77 | 377 | 1.62e-57 | 189 |
| Msa0050870 | MtrunA17_Chr3g0114461 | 47.208 | 197 | 94 | 3 | 111 | 306 | 5 | 192 | 7.60e-57 | 182 |
| Msa0050870 | MtrunA17_Chr6g0451571 | 34.967 | 306 | 190 | 6 | 5 | 306 | 34 | 334 | 3.54e-56 | 184 |
| Msa0050870 | MtrunA17_Chr4g0074851 | 35.948 | 306 | 177 | 5 | 4 | 302 | 31 | 324 | 4.34e-53 | 176 |
| Msa0050870 | MtrunA17_Chr4g0004591 | 34.877 | 324 | 149 | 4 | 2 | 305 | 74 | 355 | 6.20e-51 | 171 |
| Msa0050870 | MtrunA17_Chr2g0292281 | 43.128 | 211 | 106 | 2 | 98 | 306 | 18 | 216 | 6.19e-50 | 166 |
| Msa0050870 | MtrunA17_Chr2g0316811 | 36.491 | 285 | 133 | 6 | 5 | 242 | 50 | 333 | 1.95e-46 | 159 |
| Msa0050870 | MtrunA17_Chr2g0316141 | 35.417 | 288 | 132 | 7 | 51 | 305 | 11 | 277 | 8.99e-41 | 143 |
| Msa0050870 | MtrunA17_Chr2g0316181 | 35.417 | 288 | 132 | 7 | 51 | 305 | 11 | 277 | 8.99e-41 | 143 |
| Msa0050870 | MtrunA17_Chr3g0114491 | 59.633 | 109 | 44 | 0 | 5 | 113 | 18 | 126 | 1.39e-39 | 135 |
| Msa0050870 | MtrunA17_Chr3g0104101 | 46.099 | 141 | 73 | 3 | 169 | 306 | 9 | 149 | 3.69e-35 | 124 |
| Msa0050870 | MtrunA17_Chr5g0432321 | 45.161 | 124 | 60 | 2 | 126 | 249 | 17 | 132 | 2.67e-29 | 108 |
| Msa0050870 | MtrunA17_Chr1g0181501 | 37.245 | 196 | 108 | 5 | 116 | 306 | 4 | 189 | 1.52e-28 | 108 |
| Msa0050870 | MtrunA17_Chr6g0468731 | 64.789 | 71 | 21 | 2 | 44 | 114 | 22 | 88 | 6.25e-23 | 90.9 |
| Msa0050870 | MtrunA17_Chr7g0254181 | 44.762 | 105 | 54 | 2 | 67 | 171 | 22 | 122 | 1.46e-21 | 89.0 |
| Msa0050870 | MtrunA17_Chr5g0432361 | 44.086 | 93 | 51 | 1 | 213 | 305 | 17 | 108 | 1.42e-19 | 82.4 |
| Msa0050870 | MtrunA17_Chr2g0316771 | 32.973 | 185 | 90 | 4 | 152 | 305 | 4 | 185 | 3.98e-19 | 83.6 |
| Msa0050870 | MtrunA17_Chr3g0137751 | 28.839 | 267 | 116 | 8 | 36 | 287 | 105 | 312 | 5.58e-19 | 85.5 |
| Msa0050870 | MtrunA17_Chr1g0181491 | 41.905 | 105 | 59 | 2 | 5 | 109 | 12 | 114 | 8.34e-18 | 78.6 |
| Msa0050870 | MtrunA17_Chr4g0013811 | 49.333 | 75 | 38 | 0 | 115 | 189 | 5 | 79 | 8.46e-18 | 76.6 |
| Msa0050870 | MtrunA17_Chr7g0268491 | 43.023 | 86 | 46 | 2 | 221 | 306 | 15 | 97 | 5.23e-15 | 69.7 |
| Msa0050870 | MtrunA17_Chr7g0254171 | 44.578 | 83 | 45 | 1 | 48 | 130 | 1 | 82 | 6.63e-15 | 70.5 |
| Msa0050870 | MtrunA17_Chr1g0196191 | 40.244 | 82 | 44 | 2 | 47 | 124 | 27 | 107 | 4.21e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0050870 | AT1G44970.1 | 77.483 | 302 | 68 | 0 | 5 | 306 | 45 | 346 | 1.57e-172 | 481 |
| Msa0050870 | AT4G36430.1 | 60.927 | 302 | 117 | 1 | 5 | 306 | 30 | 330 | 2.88e-140 | 399 |
| Msa0050870 | AT2G18150.1 | 60.927 | 302 | 117 | 1 | 5 | 306 | 36 | 336 | 1.10e-139 | 398 |
| Msa0050870 | AT5G66390.1 | 61.589 | 302 | 115 | 1 | 5 | 306 | 33 | 333 | 5.64e-139 | 396 |
| Msa0050870 | AT2G18140.1 | 57.285 | 302 | 128 | 1 | 5 | 306 | 35 | 335 | 4.53e-130 | 374 |
| Msa0050870 | AT3G50990.1 | 57.616 | 302 | 127 | 1 | 5 | 306 | 41 | 341 | 1.01e-125 | 363 |
| Msa0050870 | AT5G06720.1 | 50.662 | 302 | 149 | 0 | 5 | 306 | 32 | 333 | 2.54e-111 | 326 |
| Msa0050870 | AT2G35380.1 | 53.548 | 310 | 124 | 4 | 9 | 306 | 34 | 335 | 5.10e-106 | 312 |
| Msa0050870 | AT5G06730.1 | 47.682 | 302 | 158 | 0 | 5 | 306 | 33 | 334 | 7.91e-105 | 310 |
| Msa0050870 | AT2G38390.1 | 50.165 | 303 | 150 | 1 | 5 | 306 | 31 | 333 | 2.69e-104 | 308 |
| Msa0050870 | AT2G38380.1 | 49.835 | 303 | 151 | 1 | 5 | 306 | 31 | 333 | 3.22e-101 | 301 |
| Msa0050870 | AT5G05340.1 | 46.711 | 304 | 151 | 3 | 5 | 306 | 30 | 324 | 1.89e-100 | 298 |
| Msa0050870 | AT4G16270.1 | 50.485 | 309 | 140 | 7 | 1 | 306 | 50 | 348 | 2.46e-100 | 298 |
| Msa0050870 | AT5G58400.1 | 48.197 | 305 | 146 | 4 | 5 | 306 | 30 | 325 | 3.09e-100 | 297 |
| Msa0050870 | AT5G19890.1 | 50.000 | 304 | 144 | 4 | 5 | 306 | 30 | 327 | 3.44e-100 | 297 |
| Msa0050870 | AT4G08770.1 | 48.355 | 304 | 155 | 2 | 5 | 306 | 24 | 327 | 1.87e-99 | 296 |
| Msa0050870 | AT2G22420.1 | 48.344 | 302 | 151 | 3 | 5 | 306 | 23 | 319 | 2.39e-99 | 295 |
| Msa0050870 | AT4G08780.1 | 48.026 | 304 | 156 | 2 | 5 | 306 | 24 | 327 | 2.53e-99 | 296 |
| Msa0050870 | AT1G49570.1 | 51.495 | 301 | 141 | 3 | 5 | 302 | 48 | 346 | 7.10e-99 | 295 |
| Msa0050870 | AT5G58390.1 | 50.492 | 305 | 139 | 4 | 5 | 306 | 21 | 316 | 1.17e-95 | 285 |
| Msa0050870 | AT3G32980.1 | 46.711 | 304 | 160 | 2 | 5 | 306 | 31 | 334 | 2.22e-95 | 286 |
| Msa0050870 | AT3G49110.1 | 47.368 | 304 | 158 | 2 | 5 | 306 | 33 | 336 | 4.48e-95 | 285 |
| Msa0050870 | AT1G14550.1 | 48.515 | 303 | 148 | 3 | 5 | 306 | 26 | 321 | 2.09e-94 | 282 |
| Msa0050870 | AT1G68850.1 | 44.118 | 306 | 167 | 3 | 5 | 306 | 30 | 335 | 1.92e-93 | 280 |
| Msa0050870 | AT3G49120.1 | 46.711 | 304 | 160 | 2 | 5 | 306 | 32 | 335 | 3.54e-93 | 280 |
| Msa0050870 | AT1G14540.1 | 45.364 | 302 | 158 | 2 | 5 | 306 | 21 | 315 | 1.06e-90 | 273 |
| Msa0050870 | AT3G03670.1 | 44.482 | 299 | 163 | 2 | 8 | 306 | 26 | 321 | 9.42e-88 | 265 |
| Msa0050870 | AT5G19880.1 | 44.262 | 305 | 167 | 2 | 5 | 306 | 25 | 329 | 8.19e-87 | 263 |
| Msa0050870 | AT5G42180.1 | 45.215 | 303 | 157 | 6 | 4 | 305 | 22 | 316 | 4.77e-83 | 253 |
| Msa0050870 | AT5G64120.1 | 43.960 | 298 | 159 | 5 | 9 | 306 | 39 | 328 | 6.50e-83 | 253 |
| Msa0050870 | AT5G51890.1 | 44.262 | 305 | 161 | 6 | 4 | 306 | 25 | 322 | 1.21e-82 | 252 |
| Msa0050870 | AT5G17820.1 | 41.946 | 298 | 161 | 5 | 9 | 306 | 28 | 313 | 4.49e-82 | 251 |
| Msa0050870 | AT1G05260.1 | 44.224 | 303 | 165 | 4 | 5 | 306 | 26 | 325 | 1.38e-81 | 250 |
| Msa0050870 | AT5G17820.2 | 41.946 | 298 | 161 | 5 | 9 | 306 | 81 | 366 | 7.57e-81 | 249 |
| Msa0050870 | AT1G71695.1 | 44.444 | 306 | 158 | 6 | 4 | 306 | 43 | 339 | 1.33e-80 | 248 |
| Msa0050870 | AT2G35380.2 | 51.765 | 255 | 103 | 4 | 64 | 306 | 1 | 247 | 1.61e-80 | 244 |
| Msa0050870 | AT4G33420.1 | 43.894 | 303 | 157 | 6 | 4 | 306 | 36 | 325 | 9.63e-79 | 243 |
| Msa0050870 | AT4G33420.2 | 43.894 | 303 | 157 | 6 | 4 | 306 | 83 | 372 | 3.74e-78 | 243 |
| Msa0050870 | AT4G11290.1 | 43.333 | 300 | 166 | 3 | 9 | 306 | 29 | 326 | 3.93e-78 | 241 |
| Msa0050870 | AT3G21770.1 | 42.857 | 301 | 164 | 5 | 5 | 302 | 29 | 324 | 5.26e-77 | 238 |
| Msa0050870 | AT5G15180.1 | 43.092 | 304 | 167 | 5 | 4 | 306 | 31 | 329 | 1.85e-76 | 237 |
| Msa0050870 | AT1G05240.1 | 41.196 | 301 | 169 | 5 | 5 | 302 | 26 | 321 | 1.23e-73 | 229 |
| Msa0050870 | AT1G05250.1 | 41.196 | 301 | 169 | 5 | 5 | 302 | 26 | 321 | 1.23e-73 | 229 |
| Msa0050870 | AT2G41480.1 | 42.904 | 303 | 161 | 5 | 9 | 306 | 33 | 328 | 3.17e-73 | 228 |
| Msa0050870 | AT5G39580.1 | 42.475 | 299 | 163 | 6 | 9 | 306 | 29 | 319 | 4.12e-73 | 228 |
| Msa0050870 | AT3G01190.1 | 40.984 | 305 | 174 | 5 | 2 | 306 | 23 | 321 | 3.69e-71 | 223 |
| Msa0050870 | AT4G26010.1 | 41.137 | 299 | 160 | 6 | 9 | 306 | 26 | 309 | 4.28e-71 | 223 |
| Msa0050870 | AT4G26010.2 | 41.137 | 299 | 160 | 6 | 9 | 306 | 54 | 337 | 9.27e-71 | 223 |
| Msa0050870 | AT2G18980.1 | 40.000 | 305 | 174 | 4 | 5 | 306 | 25 | 323 | 2.63e-70 | 221 |
| Msa0050870 | AT4G25980.1 | 40.924 | 303 | 168 | 5 | 9 | 306 | 30 | 326 | 7.11e-70 | 220 |
| Msa0050870 | AT2G39040.1 | 42.395 | 309 | 167 | 6 | 5 | 306 | 46 | 350 | 1.21e-69 | 220 |
| Msa0050870 | AT4G30170.1 | 39.032 | 310 | 178 | 5 | 1 | 306 | 23 | 325 | 2.10e-69 | 219 |
| Msa0050870 | AT4G33870.1 | 37.048 | 332 | 171 | 4 | 9 | 305 | 72 | 400 | 7.88e-69 | 219 |
| Msa0050870 | AT1G30870.1 | 41.967 | 305 | 164 | 7 | 5 | 306 | 51 | 345 | 7.88e-68 | 215 |
| Msa0050870 | AT5G64100.1 | 40.199 | 301 | 167 | 7 | 9 | 306 | 41 | 331 | 1.60e-67 | 214 |
| Msa0050870 | AT5G64110.1 | 41.528 | 301 | 165 | 5 | 9 | 306 | 38 | 330 | 1.64e-67 | 214 |
| Msa0050870 | AT4G37530.1 | 38.889 | 306 | 180 | 4 | 5 | 306 | 27 | 329 | 3.84e-66 | 210 |
| Msa0050870 | AT4G31760.1 | 40.065 | 307 | 176 | 3 | 2 | 306 | 26 | 326 | 5.72e-66 | 210 |
| Msa0050870 | AT4G37520.1 | 36.877 | 301 | 185 | 3 | 5 | 302 | 27 | 325 | 2.71e-64 | 206 |
| Msa0050870 | AT3G49960.1 | 36.393 | 305 | 189 | 3 | 5 | 306 | 27 | 329 | 7.00e-64 | 204 |
| Msa0050870 | AT5G40150.1 | 40.461 | 304 | 172 | 5 | 5 | 306 | 32 | 328 | 7.10e-64 | 204 |
| Msa0050870 | AT5G47000.1 | 38.636 | 308 | 173 | 7 | 5 | 306 | 33 | 330 | 3.64e-63 | 203 |
| Msa0050870 | AT1G77100.1 | 39.604 | 303 | 167 | 6 | 9 | 306 | 28 | 319 | 1.73e-62 | 201 |
| Msa0050870 | AT4G37520.2 | 36.545 | 301 | 183 | 4 | 5 | 302 | 27 | 322 | 1.93e-62 | 201 |
| Msa0050870 | AT5G67400.1 | 36.721 | 305 | 188 | 3 | 5 | 306 | 27 | 329 | 7.73e-62 | 199 |
| Msa0050870 | AT2G34060.1 | 38.033 | 305 | 180 | 7 | 5 | 303 | 42 | 343 | 9.14e-62 | 199 |
| Msa0050870 | AT3G28200.1 | 37.500 | 304 | 180 | 4 | 5 | 306 | 21 | 316 | 3.07e-60 | 195 |
| Msa0050870 | AT2G24800.1 | 39.016 | 305 | 177 | 5 | 5 | 306 | 31 | 329 | 4.86e-60 | 194 |
| Msa0050870 | AT4G17690.1 | 37.377 | 305 | 180 | 5 | 5 | 306 | 26 | 322 | 5.60e-60 | 194 |
| Msa0050870 | AT1G24110.1 | 37.908 | 306 | 181 | 7 | 5 | 306 | 22 | 322 | 6.73e-60 | 194 |
| Msa0050870 | AT5G14130.1 | 35.314 | 303 | 191 | 4 | 5 | 306 | 32 | 330 | 7.82e-59 | 191 |
| Msa0050870 | AT1G34510.1 | 37.458 | 299 | 171 | 6 | 9 | 306 | 26 | 309 | 1.24e-58 | 191 |
| Msa0050870 | AT5G14130.2 | 35.314 | 303 | 191 | 4 | 5 | 306 | 73 | 371 | 2.10e-58 | 192 |
| Msa0050870 | AT5G22410.1 | 38.000 | 300 | 172 | 8 | 9 | 303 | 32 | 322 | 1.41e-57 | 188 |
| Msa0050870 | AT2G43480.1 | 35.599 | 309 | 184 | 6 | 5 | 306 | 35 | 335 | 4.00e-57 | 187 |
| Msa0050870 | AT2G37130.2 | 38.079 | 302 | 175 | 5 | 9 | 306 | 3 | 296 | 7.24e-57 | 186 |
| Msa0050870 | AT3G17070.1 | 36.306 | 314 | 178 | 7 | 4 | 306 | 37 | 339 | 7.60e-57 | 187 |
| Msa0050870 | AT2G37130.1 | 37.908 | 306 | 178 | 5 | 5 | 306 | 30 | 327 | 1.23e-56 | 186 |
| Msa0050870 | AT5G24070.1 | 34.177 | 316 | 187 | 6 | 4 | 306 | 28 | 335 | 2.00e-56 | 186 |
| Msa0050870 | AT4G37530.2 | 38.281 | 256 | 155 | 2 | 2 | 254 | 24 | 279 | 3.17e-56 | 183 |
| Msa0050870 | AT4G21960.1 | 37.742 | 310 | 174 | 5 | 4 | 306 | 30 | 327 | 6.32e-56 | 184 |
| Msa0050870 | AT4G25980.2 | 48.171 | 164 | 81 | 3 | 9 | 172 | 75 | 234 | 5.54e-44 | 152 |
| Msa0050870 | AT3G17070.2 | 34.686 | 271 | 154 | 8 | 47 | 306 | 18 | 276 | 1.89e-42 | 147 |
| Msa0050870 | AT5G39580.2 | 45.455 | 165 | 85 | 3 | 9 | 173 | 29 | 188 | 2.28e-39 | 138 |
| Msa0050870 | AT2G24800.2 | 38.614 | 202 | 109 | 3 | 5 | 206 | 31 | 217 | 7.64e-37 | 132 |
| Msa0050870 | AT4G32320.1 | 30.337 | 267 | 112 | 8 | 36 | 287 | 114 | 321 | 2.07e-20 | 90.1 |
| Msa0050870 | AT3G42570.1 | 35.052 | 97 | 62 | 1 | 77 | 172 | 53 | 149 | 2.51e-13 | 67.0 |
| Msa0050870 | AT4G08390.2 | 26.394 | 269 | 144 | 10 | 39 | 288 | 127 | 360 | 2.21e-12 | 67.4 |
| Msa0050870 | AT4G08390.5 | 26.394 | 269 | 144 | 10 | 39 | 288 | 127 | 360 | 2.21e-12 | 67.4 |
| Msa0050870 | AT4G08390.1 | 26.394 | 269 | 144 | 10 | 39 | 288 | 127 | 360 | 2.21e-12 | 67.4 |
| Msa0050870 | AT4G08390.3 | 26.394 | 269 | 144 | 10 | 39 | 288 | 126 | 359 | 2.34e-12 | 67.4 |
| Msa0050870 | AT1G77490.2 | 25.573 | 262 | 155 | 10 | 39 | 288 | 106 | 339 | 6.00e-11 | 63.2 |
| Msa0050870 | AT1G77490.1 | 25.573 | 262 | 155 | 10 | 39 | 288 | 106 | 339 | 6.12e-11 | 63.2 |
Find 78 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGTTGGTTGTTTCCATTT+TGG | 0.258817 | 1_2:+4898521 | None:intergenic |
| CCTAAGTAAGAGTTTGTAAT+AGG | 0.274011 | 1_2:+4898384 | None:intergenic |
| ACCACTAGAGGAATGTCTTT+TGG | 0.298662 | 1_2:-4899769 | Msa0050870:exon |
| CCTATTACAAACTCTTACTT+AGG | 0.320265 | 1_2:-4898384 | Msa0050870:CDS |
| CAAAGACTATACAACCAAAA+TGG | 0.350393 | 1_2:-4898535 | Msa0050870:CDS |
| ATTATTTCTCCCTTGGACTT+TGG | 0.352038 | 1_2:-4898430 | Msa0050870:CDS |
| AGGTATTATCAAACATTCTT+GGG | 0.352062 | 1_2:+4898404 | None:intergenic |
| TTTGAGTCTCTCCTTCCTAA+TGG | 0.355118 | 1_2:+4898844 | None:intergenic |
| TAGGTATTATCAAACATTCT+TGG | 0.367240 | 1_2:+4898403 | None:intergenic |
| GCCTTGTCTATGATCAAGTT+GGG | 0.368870 | 1_2:-4898250 | Msa0050870:CDS |
| TTTGGCTGGGGTGGTCATCA+TGG | 0.381646 | 1_2:-4899796 | Msa0050870:five_prime_UTR |
| AGACCTTCAATAGTTGCATT+TGG | 0.390969 | 1_2:+4898781 | None:intergenic |
| TGACAATATTATTTCTCCCT+TGG | 0.404351 | 1_2:-4898437 | Msa0050870:CDS |
| CCACCAAATGCAACTATTGA+AGG | 0.405803 | 1_2:-4898784 | Msa0050870:CDS |
| GTAGACCTTGTTGCCCTCTC+AGG | 0.409416 | 1_2:-4898724 | Msa0050870:intron |
| TATTGTTGCCCTTGCTGCTA+GGG | 0.421519 | 1_2:-4899152 | Msa0050870:CDS |
| ATATTGTTGCCCTTGCTGCT+AGG | 0.427899 | 1_2:-4899153 | Msa0050870:CDS |
| AAACTCTTACTTAGGGGAAA+AGG | 0.433563 | 1_2:-4898376 | Msa0050870:CDS |
| CTATTACAAACTCTTACTTA+GGG | 0.433600 | 1_2:-4898383 | Msa0050870:CDS |
| ATATTGTCACCACCTGATCT+TGG | 0.435527 | 1_2:+4898451 | None:intergenic |
| AACAGAGTGGAGGACCCAAC+TGG | 0.440175 | 1_2:-4898873 | Msa0050870:intron |
| AAATCAATGTGCCCAAGATC+AGG | 0.449302 | 1_2:-4898463 | Msa0050870:CDS |
| TCCTAATGGTAGCTCCCAGT+TGG | 0.462642 | 1_2:+4898858 | None:intergenic |
| GGGAACCTTCGTCCTCTCAC+TGG | 0.462709 | 1_2:-4898229 | Msa0050870:CDS |
| CCTTCAATAGTTGCATTTGG+TGG | 0.468155 | 1_2:+4898784 | None:intergenic |
| GCTTCTCACGGGGAATGTTA+AGG | 0.470744 | 1_2:-4898332 | Msa0050870:CDS |
| TGCCTTGTCTATGATCAAGT+TGG | 0.474042 | 1_2:-4898251 | Msa0050870:CDS |
| AATGTAGGTGCACATACAAT+TGG | 0.478313 | 1_2:-4898583 | Msa0050870:intron |
| TGATGAGATCAAATCTAAGT+TGG | 0.478968 | 1_2:-4899209 | Msa0050870:CDS |
| TATTGTCACCACCTGATCTT+GGG | 0.480354 | 1_2:+4898452 | None:intergenic |
| TTTCTAGATTCGAATCTGGT+TGG | 0.488001 | 1_2:+4898506 | None:intergenic |
| CTTCAATAGTTGCATTTGGT+GGG | 0.492398 | 1_2:+4898785 | None:intergenic |
| TGACATTGTCATGTCAGTCT+TGG | 0.493447 | 1_2:-4899704 | Msa0050870:CDS |
| CCTAATGGTAGCTCCCAGTT+GGG | 0.500426 | 1_2:+4898859 | None:intergenic |
| TCAATAGTTGCATTTGGTGG+GGG | 0.508864 | 1_2:+4898787 | None:intergenic |
| TTCAATAGTTGCATTTGGTG+GGG | 0.518047 | 1_2:+4898786 | None:intergenic |
| TGACAATGTCATTAGCTTGA+GGG | 0.524979 | 1_2:+4899716 | None:intergenic |
| CCCAACTGGGAGCTACCATT+AGG | 0.529796 | 1_2:-4898859 | Msa0050870:CDS |
| TCAGATGAAGTGCTTCTCAC+GGG | 0.531970 | 1_2:-4898343 | Msa0050870:CDS |
| CTTCCACGACTGCTTCGTGC+AGG | 0.531991 | 1_2:-4899629 | Msa0050870:intron |
| TTTGAAAGTTCCACCTGAGA+GGG | 0.537314 | 1_2:+4898711 | None:intergenic |
| TCTGCACATGAGACTGTATG+AGG | 0.537536 | 1_2:+4899175 | None:intergenic |
| CATGAAAACTGATAGAATTG+AGG | 0.540572 | 1_2:+4899739 | None:intergenic |
| CCAAAGTGAAAATCATGGAC+AGG | 0.542594 | 1_2:+4899814 | None:intergenic |
| TTCAGATGAAGTGCTTCTCA+CGG | 0.542726 | 1_2:-4898344 | Msa0050870:CDS |
| TCTTGGGGAGCCAAAGTCCA+AGG | 0.548432 | 1_2:+4898420 | None:intergenic |
| CCCAGCCAAAGTGAAAATCA+TGG | 0.562562 | 1_2:+4899809 | None:intergenic |
| ATTGTTGCCCTTGCTGCTAG+GGG | 0.562619 | 1_2:-4899151 | Msa0050870:CDS |
| GGCTGGGGTGGTCATCATGG+TGG | 0.563986 | 1_2:-4899793 | Msa0050870:five_prime_UTR |
| TGTTAAGGAGACTCGTGACT+TGG | 0.564179 | 1_2:-4898317 | Msa0050870:CDS |
| CTTGGAGAAGGCCATTGCTA+AGG | 0.567799 | 1_2:-4899686 | Msa0050870:CDS |
| AATCATGGACAGGATGAGCA+TGG | 0.575254 | 1_2:+4899824 | None:intergenic |
| ATCATGGACAGGATGAGCAT+GGG | 0.575357 | 1_2:+4899825 | None:intergenic |
| TCCAAAAGACATTCCTCTAG+TGG | 0.581773 | 1_2:+4899768 | None:intergenic |
| AGTGGATCCCCTAGCAGCAA+GGG | 0.584231 | 1_2:+4899144 | None:intergenic |
| CCTTGTCTATGATCAAGTTG+GGG | 0.590007 | 1_2:-4898249 | Msa0050870:CDS |
| ATGACAATGTCATTAGCTTG+AGG | 0.594591 | 1_2:+4899715 | None:intergenic |
| CAACAAGGTCTACTTCATCA+AGG | 0.594873 | 1_2:+4898734 | None:intergenic |
| CAGTGGATCCCCTAGCAGCA+AGG | 0.596237 | 1_2:+4899143 | None:intergenic |
| CATCATGGTGGAACCACTAG+AGG | 0.601048 | 1_2:-4899781 | Msa0050870:five_prime_UTR |
| TTACCTGCACGAAGCAGTCG+TGG | 0.601762 | 1_2:+4899626 | None:intergenic |
| AATCACTTCAAAACCTCGGA+CGG | 0.602593 | 1_2:+4899231 | None:intergenic |
| GGTATTATCAAACATTCTTG+GGG | 0.603868 | 1_2:+4898405 | None:intergenic |
| CCCCAACTTGATCATAGACA+AGG | 0.616517 | 1_2:+4898249 | None:intergenic |
| ACAGAGTGGAGGACCCAACT+GGG | 0.620032 | 1_2:-4898872 | Msa0050870:intron |
| TGTCATGTCAGTCTTGGAGA+AGG | 0.621040 | 1_2:-4899698 | Msa0050870:CDS |
| CATCAATCACTTCAAAACCT+CGG | 0.621498 | 1_2:+4899227 | None:intergenic |
| TATTACAAACTCTTACTTAG+GGG | 0.623907 | 1_2:-4898382 | Msa0050870:CDS |
| ATTTGAAAGTTCCACCTGAG+AGG | 0.625792 | 1_2:+4898710 | None:intergenic |
| ACTGGGAGCTACCATTAGGA+AGG | 0.630159 | 1_2:-4898855 | Msa0050870:CDS |
| TATTCTGATATCCTTAGCAA+TGG | 0.632717 | 1_2:+4899675 | None:intergenic |
| TTCCACCTGAGAGGGCAACA+AGG | 0.641016 | 1_2:+4898719 | None:intergenic |
| CTTGGGGAGCCAAAGTCCAA+GGG | 0.659085 | 1_2:+4898421 | None:intergenic |
| TCAATGTGCCCAAGATCAGG+TGG | 0.661889 | 1_2:-4898460 | Msa0050870:CDS |
| CAGATGAAGTGCTTCTCACG+GGG | 0.668421 | 1_2:-4898342 | Msa0050870:CDS |
| TCGCCATTAAAACCAGTGAG+AGG | 0.697253 | 1_2:+4898217 | None:intergenic |
| TAAAACCAGTGAGAGGACGA+AGG | 0.705812 | 1_2:+4898224 | None:intergenic |
| AGGTGCACATACAATTGGTG+TGG | 0.734240 | 1_2:-4898578 | Msa0050870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTTTATGTTTTACTTG+CGG | + | chr1_2:4898548-4898567 | None:intergenic | 15.0% |
| !!! | TTTATTTTACTTTTAATGAC+AGG | - | chr1_2:4898694-4898713 | Msa0050870:intron | 15.0% |
| !!! | TTATTTTACTTTTAATGACA+GGG | - | chr1_2:4898695-4898714 | Msa0050870:intron | 15.0% |
| !!! | AACAATTTTTTAATAGACTA+TGG | - | chr1_2:4899018-4899037 | Msa0050870:intron | 15.0% |
| !!! | ATTATTTTATGTTTTACTTG+CGG | + | chr1_2:4898548-4898567 | None:intergenic | 15.0% |
| !!! | TTTATTTTACTTTTAATGAC+AGG | - | chr1_2:4898694-4898713 | Msa0050870:intron | 15.0% |
| !!! | TTATTTTACTTTTAATGACA+GGG | - | chr1_2:4898695-4898714 | Msa0050870:intron | 15.0% |
| !!! | AACAATTTTTTAATAGACTA+TGG | - | chr1_2:4899018-4899037 | Msa0050870:intron | 15.0% |
| !!! | TTTTTTCTCTCAAAATTTGT+TGG | + | chr1_2:4898618-4898637 | None:intergenic | 20.0% |
| !!! | CTAGAAAAAACATTTTACTT+TGG | - | chr1_2:4899533-4899552 | Msa0050870:intron | 20.0% |
| !!! | TTTTTTCTCTCAAAATTTGT+TGG | + | chr1_2:4898618-4898637 | None:intergenic | 20.0% |
| !!! | CTAGAAAAAACATTTTACTT+TGG | - | chr1_2:4899533-4899552 | Msa0050870:intron | 20.0% |
| ! | ACAATTGTCAGTGAAAAAAA+TGG | - | chr1_2:4898752-4898771 | Msa0050870:CDS | 25.0% |
| !!! | TTTTTTTCTTACAAGAACAG+TGG | + | chr1_2:4898900-4898919 | None:intergenic | 25.0% |
| ! | CATGCAAAGTATATAAAAGT+TGG | + | chr1_2:4898947-4898966 | None:intergenic | 25.0% |
| !!! | AATATTCTTTTGAAACAGAG+TGG | - | chr1_2:4899137-4899156 | Msa0050870:intron | 25.0% |
| ! | TGTAACACTAATAGAAAATG+TGG | + | chr1_2:4899345-4899364 | None:intergenic | 25.0% |
| ! | AGGTATTATCAAACATTCTT+GGG | + | chr1_2:4899622-4899641 | None:intergenic | 25.0% |
| ! | TAGGTATTATCAAACATTCT+TGG | + | chr1_2:4899623-4899642 | None:intergenic | 25.0% |
| ! | CTATTACAAACTCTTACTTA+GGG | - | chr1_2:4899640-4899659 | Msa0050870:CDS | 25.0% |
| ! | TATTACAAACTCTTACTTAG+GGG | - | chr1_2:4899641-4899660 | Msa0050870:CDS | 25.0% |
| ! | ACAATTGTCAGTGAAAAAAA+TGG | - | chr1_2:4898752-4898771 | Msa0050870:CDS | 25.0% |
| !!! | TTTTTTTCTTACAAGAACAG+TGG | + | chr1_2:4898900-4898919 | None:intergenic | 25.0% |
| ! | CATGCAAAGTATATAAAAGT+TGG | + | chr1_2:4898947-4898966 | None:intergenic | 25.0% |
| !!! | AATATTCTTTTGAAACAGAG+TGG | - | chr1_2:4899137-4899156 | Msa0050870:intron | 25.0% |
| ! | TGTAACACTAATAGAAAATG+TGG | + | chr1_2:4899345-4899364 | None:intergenic | 25.0% |
| ! | AGGTATTATCAAACATTCTT+GGG | + | chr1_2:4899622-4899641 | None:intergenic | 25.0% |
| ! | TAGGTATTATCAAACATTCT+TGG | + | chr1_2:4899623-4899642 | None:intergenic | 25.0% |
| ! | CTATTACAAACTCTTACTTA+GGG | - | chr1_2:4899640-4899659 | Msa0050870:CDS | 25.0% |
| ! | TATTACAAACTCTTACTTAG+GGG | - | chr1_2:4899641-4899660 | Msa0050870:CDS | 25.0% |
| CATGAAAACTGATAGAATTG+AGG | + | chr1_2:4898287-4898306 | None:intergenic | 30.0% | |
| TATTCTGATATCCTTAGCAA+TGG | + | chr1_2:4898351-4898370 | None:intergenic | 30.0% | |
| ! | GCAATACATGTTCTAAATAC+AGG | - | chr1_2:4898435-4898454 | Msa0050870:CDS | 30.0% |
| TTAAGTCTTTGCATTTGTAC+CGG | - | chr1_2:4898481-4898500 | Msa0050870:CDS | 30.0% | |
| CTTGATGTTATATCGAAGTA+CGG | + | chr1_2:4898517-4898536 | None:intergenic | 30.0% | |
| CAAATTAAGAACGTGTATTC+AGG | + | chr1_2:4898595-4898614 | None:intergenic | 30.0% | |
| ATTGTCAGTGAAAAAAATGG+TGG | - | chr1_2:4898755-4898774 | Msa0050870:CDS | 30.0% | |
| TGATGAGATCAAATCTAAGT+TGG | - | chr1_2:4898814-4898833 | Msa0050870:CDS | 30.0% | |
| ACTTTGCATGTCATATACTA+AGG | - | chr1_2:4898957-4898976 | Msa0050870:intron | 30.0% | |
| CTTTGCATGTCATATACTAA+GGG | - | chr1_2:4898958-4898977 | Msa0050870:intron | 30.0% | |
| TTTGCATGTCATATACTAAG+GGG | - | chr1_2:4898959-4898978 | Msa0050870:intron | 30.0% | |
| !!! | TTAACATTTTTCAAGCGTCA+AGG | - | chr1_2:4899266-4899285 | Msa0050870:CDS | 30.0% |
| ! | AGATCGTCACTTTATAATGT+AGG | - | chr1_2:4899425-4899444 | Msa0050870:intron | 30.0% |
| CAAAGACTATACAACCAAAA+TGG | - | chr1_2:4899488-4899507 | Msa0050870:intron | 30.0% | |
| !!! | GTTTTTTCTAGATTCGAATC+TGG | + | chr1_2:4899524-4899543 | None:intergenic | 30.0% |
| ! | TGACAATATTATTTCTCCCT+TGG | - | chr1_2:4899586-4899605 | Msa0050870:intron | 30.0% |
| GGTATTATCAAACATTCTTG+GGG | + | chr1_2:4899621-4899640 | None:intergenic | 30.0% | |
| CCTAAGTAAGAGTTTGTAAT+AGG | + | chr1_2:4899642-4899661 | None:intergenic | 30.0% | |
| CCTATTACAAACTCTTACTT+AGG | - | chr1_2:4899639-4899658 | Msa0050870:CDS | 30.0% | |
| CATGAAAACTGATAGAATTG+AGG | + | chr1_2:4898287-4898306 | None:intergenic | 30.0% | |
| TATTCTGATATCCTTAGCAA+TGG | + | chr1_2:4898351-4898370 | None:intergenic | 30.0% | |
| ! | GCAATACATGTTCTAAATAC+AGG | - | chr1_2:4898435-4898454 | Msa0050870:CDS | 30.0% |
| TTAAGTCTTTGCATTTGTAC+CGG | - | chr1_2:4898481-4898500 | Msa0050870:CDS | 30.0% | |
| CTTGATGTTATATCGAAGTA+CGG | + | chr1_2:4898517-4898536 | None:intergenic | 30.0% | |
| CAAATTAAGAACGTGTATTC+AGG | + | chr1_2:4898595-4898614 | None:intergenic | 30.0% | |
| ATTGTCAGTGAAAAAAATGG+TGG | - | chr1_2:4898755-4898774 | Msa0050870:CDS | 30.0% | |
| TGATGAGATCAAATCTAAGT+TGG | - | chr1_2:4898814-4898833 | Msa0050870:CDS | 30.0% | |
| ACTTTGCATGTCATATACTA+AGG | - | chr1_2:4898957-4898976 | Msa0050870:intron | 30.0% | |
| CTTTGCATGTCATATACTAA+GGG | - | chr1_2:4898958-4898977 | Msa0050870:intron | 30.0% | |
| TTTGCATGTCATATACTAAG+GGG | - | chr1_2:4898959-4898978 | Msa0050870:intron | 30.0% | |
| !!! | TTAACATTTTTCAAGCGTCA+AGG | - | chr1_2:4899266-4899285 | Msa0050870:CDS | 30.0% |
| ! | AGATCGTCACTTTATAATGT+AGG | - | chr1_2:4899425-4899444 | Msa0050870:intron | 30.0% |
| CAAAGACTATACAACCAAAA+TGG | - | chr1_2:4899488-4899507 | Msa0050870:intron | 30.0% | |
| !!! | GTTTTTTCTAGATTCGAATC+TGG | + | chr1_2:4899524-4899543 | None:intergenic | 30.0% |
| ! | TGACAATATTATTTCTCCCT+TGG | - | chr1_2:4899586-4899605 | Msa0050870:intron | 30.0% |
| GGTATTATCAAACATTCTTG+GGG | + | chr1_2:4899621-4899640 | None:intergenic | 30.0% | |
| CCTAAGTAAGAGTTTGTAAT+AGG | + | chr1_2:4899642-4899661 | None:intergenic | 30.0% | |
| CCTATTACAAACTCTTACTT+AGG | - | chr1_2:4899639-4899658 | Msa0050870:CDS | 30.0% | |
| ! | TGACAATGTCATTAGCTTGA+GGG | + | chr1_2:4898310-4898329 | None:intergenic | 35.0% |
| ! | ATGACAATGTCATTAGCTTG+AGG | + | chr1_2:4898311-4898330 | None:intergenic | 35.0% |
| TTAAGAACGTGTATTCAGGA+AGG | + | chr1_2:4898591-4898610 | None:intergenic | 35.0% | |
| ! | TCTTTTGCATGCATATGTCA+AGG | - | chr1_2:4898655-4898674 | Msa0050870:intron | 35.0% |
| CATCAATCACTTCAAAACCT+CGG | + | chr1_2:4898799-4898818 | None:intergenic | 35.0% | |
| !!! | ATTCTTTTGAAACAGAGTGG+AGG | - | chr1_2:4899140-4899159 | Msa0050870:CDS | 35.0% |
| !! | TGTTTTTGTTTGATCCCCTT+AGG | + | chr1_2:4899214-4899233 | None:intergenic | 35.0% |
| ! | TTCAATAGTTGCATTTGGTG+GGG | + | chr1_2:4899240-4899259 | None:intergenic | 35.0% |
| CTTCAATAGTTGCATTTGGT+GGG | + | chr1_2:4899241-4899260 | None:intergenic | 35.0% | |
| AGACCTTCAATAGTTGCATT+TGG | + | chr1_2:4899245-4899264 | None:intergenic | 35.0% | |
| AATGTAGGTGCACATACAAT+TGG | - | chr1_2:4899440-4899459 | Msa0050870:intron | 35.0% | |
| TTTCTAGATTCGAATCTGGT+TGG | + | chr1_2:4899520-4899539 | None:intergenic | 35.0% | |
| ! | ATTATTTCTCCCTTGGACTT+TGG | - | chr1_2:4899593-4899612 | Msa0050870:intron | 35.0% |
| AAACTCTTACTTAGGGGAAA+AGG | - | chr1_2:4899647-4899666 | Msa0050870:CDS | 35.0% | |
| ! | TGACAATGTCATTAGCTTGA+GGG | + | chr1_2:4898310-4898329 | None:intergenic | 35.0% |
| ! | ATGACAATGTCATTAGCTTG+AGG | + | chr1_2:4898311-4898330 | None:intergenic | 35.0% |
| TTAAGAACGTGTATTCAGGA+AGG | + | chr1_2:4898591-4898610 | None:intergenic | 35.0% | |
| ! | TCTTTTGCATGCATATGTCA+AGG | - | chr1_2:4898655-4898674 | Msa0050870:intron | 35.0% |
| CATCAATCACTTCAAAACCT+CGG | + | chr1_2:4898799-4898818 | None:intergenic | 35.0% | |
| !!! | ATTCTTTTGAAACAGAGTGG+AGG | - | chr1_2:4899140-4899159 | Msa0050870:CDS | 35.0% |
| !! | TGTTTTTGTTTGATCCCCTT+AGG | + | chr1_2:4899214-4899233 | None:intergenic | 35.0% |
| ! | TTCAATAGTTGCATTTGGTG+GGG | + | chr1_2:4899240-4899259 | None:intergenic | 35.0% |
| CTTCAATAGTTGCATTTGGT+GGG | + | chr1_2:4899241-4899260 | None:intergenic | 35.0% | |
| AGACCTTCAATAGTTGCATT+TGG | + | chr1_2:4899245-4899264 | None:intergenic | 35.0% | |
| AATGTAGGTGCACATACAAT+TGG | - | chr1_2:4899440-4899459 | Msa0050870:intron | 35.0% | |
| TTTCTAGATTCGAATCTGGT+TGG | + | chr1_2:4899520-4899539 | None:intergenic | 35.0% | |
| ! | ATTATTTCTCCCTTGGACTT+TGG | - | chr1_2:4899593-4899612 | Msa0050870:intron | 35.0% |
| AAACTCTTACTTAGGGGAAA+AGG | - | chr1_2:4899647-4899666 | Msa0050870:CDS | 35.0% | |
| CCAAAGTGAAAATCATGGAC+AGG | + | chr1_2:4898212-4898231 | None:intergenic | 40.0% | |
| ! | CCTGTCCATGATTTTCACTT+TGG | - | chr1_2:4898209-4898228 | Msa0050870:CDS | 40.0% |
| ! | TCCATGATTTTCACTTTGGC+TGG | - | chr1_2:4898213-4898232 | Msa0050870:CDS | 40.0% |
| ! | CCATGATTTTCACTTTGGCT+GGG | - | chr1_2:4898214-4898233 | Msa0050870:CDS | 40.0% |
| ! | CATGATTTTCACTTTGGCTG+GGG | - | chr1_2:4898215-4898234 | Msa0050870:CDS | 40.0% |
| ! | ACCACTAGAGGAATGTCTTT+TGG | - | chr1_2:4898254-4898273 | Msa0050870:CDS | 40.0% |
| TCCAAAAGACATTCCTCTAG+TGG | + | chr1_2:4898258-4898277 | None:intergenic | 40.0% | |
| TGACATTGTCATGTCAGTCT+TGG | - | chr1_2:4898319-4898338 | Msa0050870:CDS | 40.0% | |
| ! | CTGCGATGCATCAATTTTGT+TGG | - | chr1_2:4898718-4898737 | Msa0050870:intron | 40.0% |
| AATCACTTCAAAACCTCGGA+CGG | + | chr1_2:4898795-4898814 | None:intergenic | 40.0% | |
| AGAGACAAACACACACATCT+AGG | + | chr1_2:4899081-4899100 | None:intergenic | 40.0% | |
| TTTGAGTCTCTCCTTCCTAA+TGG | + | chr1_2:4899182-4899201 | None:intergenic | 40.0% | |
| ! | ACTCAAAAACAGCTAGCCTA+AGG | - | chr1_2:4899195-4899214 | Msa0050870:CDS | 40.0% |
| ! | CTCAAAAACAGCTAGCCTAA+GGG | - | chr1_2:4899196-4899215 | Msa0050870:CDS | 40.0% |
| ! | TCAAAAACAGCTAGCCTAAG+GGG | - | chr1_2:4899197-4899216 | Msa0050870:CDS | 40.0% |
| ! | TCAATAGTTGCATTTGGTGG+GGG | + | chr1_2:4899239-4899258 | None:intergenic | 40.0% |
| CCTTCAATAGTTGCATTTGG+TGG | + | chr1_2:4899242-4899261 | None:intergenic | 40.0% | |
| CCACCAAATGCAACTATTGA+AGG | - | chr1_2:4899239-4899258 | Msa0050870:CDS | 40.0% | |
| CAACAAGGTCTACTTCATCA+AGG | + | chr1_2:4899292-4899311 | None:intergenic | 40.0% | |
| TTTGAAAGTTCCACCTGAGA+GGG | + | chr1_2:4899315-4899334 | None:intergenic | 40.0% | |
| ATTTGAAAGTTCCACCTGAG+AGG | + | chr1_2:4899316-4899335 | None:intergenic | 40.0% | |
| !! | CTGGTTGGTTGTTTCCATTT+TGG | + | chr1_2:4899505-4899524 | None:intergenic | 40.0% |
| AAATCAATGTGCCCAAGATC+AGG | - | chr1_2:4899560-4899579 | Msa0050870:intron | 40.0% | |
| TATTGTCACCACCTGATCTT+GGG | + | chr1_2:4899574-4899593 | None:intergenic | 40.0% | |
| ATATTGTCACCACCTGATCT+TGG | + | chr1_2:4899575-4899594 | None:intergenic | 40.0% | |
| ! | TTCAGATGAAGTGCTTCTCA+CGG | - | chr1_2:4899679-4899698 | Msa0050870:CDS | 40.0% |
| TGCCTTGTCTATGATCAAGT+TGG | - | chr1_2:4899772-4899791 | Msa0050870:exon | 40.0% | |
| GCCTTGTCTATGATCAAGTT+GGG | - | chr1_2:4899773-4899792 | Msa0050870:exon | 40.0% | |
| ! | CCTTGTCTATGATCAAGTTG+GGG | - | chr1_2:4899774-4899793 | Msa0050870:exon | 40.0% |
| CCAAAGTGAAAATCATGGAC+AGG | + | chr1_2:4898212-4898231 | None:intergenic | 40.0% | |
| ! | CCTGTCCATGATTTTCACTT+TGG | - | chr1_2:4898209-4898228 | Msa0050870:CDS | 40.0% |
| ! | TCCATGATTTTCACTTTGGC+TGG | - | chr1_2:4898213-4898232 | Msa0050870:CDS | 40.0% |
| ! | CCATGATTTTCACTTTGGCT+GGG | - | chr1_2:4898214-4898233 | Msa0050870:CDS | 40.0% |
| ! | CATGATTTTCACTTTGGCTG+GGG | - | chr1_2:4898215-4898234 | Msa0050870:CDS | 40.0% |
| ! | ACCACTAGAGGAATGTCTTT+TGG | - | chr1_2:4898254-4898273 | Msa0050870:CDS | 40.0% |
| TCCAAAAGACATTCCTCTAG+TGG | + | chr1_2:4898258-4898277 | None:intergenic | 40.0% | |
| TGACATTGTCATGTCAGTCT+TGG | - | chr1_2:4898319-4898338 | Msa0050870:CDS | 40.0% | |
| ! | CTGCGATGCATCAATTTTGT+TGG | - | chr1_2:4898718-4898737 | Msa0050870:intron | 40.0% |
| AATCACTTCAAAACCTCGGA+CGG | + | chr1_2:4898795-4898814 | None:intergenic | 40.0% | |
| AGAGACAAACACACACATCT+AGG | + | chr1_2:4899081-4899100 | None:intergenic | 40.0% | |
| TTTGAGTCTCTCCTTCCTAA+TGG | + | chr1_2:4899182-4899201 | None:intergenic | 40.0% | |
| ! | ACTCAAAAACAGCTAGCCTA+AGG | - | chr1_2:4899195-4899214 | Msa0050870:CDS | 40.0% |
| ! | CTCAAAAACAGCTAGCCTAA+GGG | - | chr1_2:4899196-4899215 | Msa0050870:CDS | 40.0% |
| ! | TCAAAAACAGCTAGCCTAAG+GGG | - | chr1_2:4899197-4899216 | Msa0050870:CDS | 40.0% |
| ! | TCAATAGTTGCATTTGGTGG+GGG | + | chr1_2:4899239-4899258 | None:intergenic | 40.0% |
| CCTTCAATAGTTGCATTTGG+TGG | + | chr1_2:4899242-4899261 | None:intergenic | 40.0% | |
| CCACCAAATGCAACTATTGA+AGG | - | chr1_2:4899239-4899258 | Msa0050870:CDS | 40.0% | |
| CAACAAGGTCTACTTCATCA+AGG | + | chr1_2:4899292-4899311 | None:intergenic | 40.0% | |
| TTTGAAAGTTCCACCTGAGA+GGG | + | chr1_2:4899315-4899334 | None:intergenic | 40.0% | |
| ATTTGAAAGTTCCACCTGAG+AGG | + | chr1_2:4899316-4899335 | None:intergenic | 40.0% | |
| !! | CTGGTTGGTTGTTTCCATTT+TGG | + | chr1_2:4899505-4899524 | None:intergenic | 40.0% |
| AAATCAATGTGCCCAAGATC+AGG | - | chr1_2:4899560-4899579 | Msa0050870:intron | 40.0% | |
| TATTGTCACCACCTGATCTT+GGG | + | chr1_2:4899574-4899593 | None:intergenic | 40.0% | |
| ATATTGTCACCACCTGATCT+TGG | + | chr1_2:4899575-4899594 | None:intergenic | 40.0% | |
| ! | TTCAGATGAAGTGCTTCTCA+CGG | - | chr1_2:4899679-4899698 | Msa0050870:CDS | 40.0% |
| TGCCTTGTCTATGATCAAGT+TGG | - | chr1_2:4899772-4899791 | Msa0050870:exon | 40.0% | |
| GCCTTGTCTATGATCAAGTT+GGG | - | chr1_2:4899773-4899792 | Msa0050870:exon | 40.0% | |
| ! | CCTTGTCTATGATCAAGTTG+GGG | - | chr1_2:4899774-4899793 | Msa0050870:exon | 40.0% |
| ATCATGGACAGGATGAGCAT+GGG | + | chr1_2:4898201-4898220 | None:intergenic | 45.0% | |
| AATCATGGACAGGATGAGCA+TGG | + | chr1_2:4898202-4898221 | None:intergenic | 45.0% | |
| CCCAGCCAAAGTGAAAATCA+TGG | + | chr1_2:4898217-4898236 | None:intergenic | 45.0% | |
| TGTCATGTCAGTCTTGGAGA+AGG | - | chr1_2:4898325-4898344 | Msa0050870:CDS | 45.0% | |
| GAAGTACGGTCAAATGTGTC+CGG | + | chr1_2:4898503-4898522 | None:intergenic | 45.0% | |
| ! | CCTCGGACGGAATTTTTGTT+AGG | + | chr1_2:4898782-4898801 | None:intergenic | 45.0% |
| CCTAACAAAAATTCCGTCCG+AGG | - | chr1_2:4898779-4898798 | Msa0050870:CDS | 45.0% | |
| TCTGCACATGAGACTGTATG+AGG | + | chr1_2:4898851-4898870 | None:intergenic | 45.0% | |
| ATATTGTTGCCCTTGCTGCT+AGG | - | chr1_2:4898870-4898889 | Msa0050870:CDS | 45.0% | |
| TATTGTTGCCCTTGCTGCTA+GGG | - | chr1_2:4898871-4898890 | Msa0050870:CDS | 45.0% | |
| AGGTGCACATACAATTGGTG+TGG | - | chr1_2:4899445-4899464 | Msa0050870:intron | 45.0% | |
| ! | TCAGATGAAGTGCTTCTCAC+GGG | - | chr1_2:4899680-4899699 | Msa0050870:CDS | 45.0% |
| TGTTAAGGAGACTCGTGACT+TGG | - | chr1_2:4899706-4899725 | Msa0050870:CDS | 45.0% | |
| CCCCAACTTGATCATAGACA+AGG | + | chr1_2:4899777-4899796 | None:intergenic | 45.0% | |
| TAAAACCAGTGAGAGGACGA+AGG | + | chr1_2:4899802-4899821 | None:intergenic | 45.0% | |
| !!! | CGTCCTCTCACTGGTTTTAA+TGG | - | chr1_2:4899803-4899822 | Msa0050870:five_prime_UTR | 45.0% |
| TCGCCATTAAAACCAGTGAG+AGG | + | chr1_2:4899809-4899828 | None:intergenic | 45.0% | |
| ATCATGGACAGGATGAGCAT+GGG | + | chr1_2:4898201-4898220 | None:intergenic | 45.0% | |
| AATCATGGACAGGATGAGCA+TGG | + | chr1_2:4898202-4898221 | None:intergenic | 45.0% | |
| CCCAGCCAAAGTGAAAATCA+TGG | + | chr1_2:4898217-4898236 | None:intergenic | 45.0% | |
| TGTCATGTCAGTCTTGGAGA+AGG | - | chr1_2:4898325-4898344 | Msa0050870:CDS | 45.0% | |
| GAAGTACGGTCAAATGTGTC+CGG | + | chr1_2:4898503-4898522 | None:intergenic | 45.0% | |
| ! | CCTCGGACGGAATTTTTGTT+AGG | + | chr1_2:4898782-4898801 | None:intergenic | 45.0% |
| CCTAACAAAAATTCCGTCCG+AGG | - | chr1_2:4898779-4898798 | Msa0050870:CDS | 45.0% | |
| TCTGCACATGAGACTGTATG+AGG | + | chr1_2:4898851-4898870 | None:intergenic | 45.0% | |
| ATATTGTTGCCCTTGCTGCT+AGG | - | chr1_2:4898870-4898889 | Msa0050870:CDS | 45.0% | |
| TATTGTTGCCCTTGCTGCTA+GGG | - | chr1_2:4898871-4898890 | Msa0050870:CDS | 45.0% | |
| AGGTGCACATACAATTGGTG+TGG | - | chr1_2:4899445-4899464 | Msa0050870:intron | 45.0% | |
| ! | TCAGATGAAGTGCTTCTCAC+GGG | - | chr1_2:4899680-4899699 | Msa0050870:CDS | 45.0% |
| TGTTAAGGAGACTCGTGACT+TGG | - | chr1_2:4899706-4899725 | Msa0050870:CDS | 45.0% | |
| CCCCAACTTGATCATAGACA+AGG | + | chr1_2:4899777-4899796 | None:intergenic | 45.0% | |
| TAAAACCAGTGAGAGGACGA+AGG | + | chr1_2:4899802-4899821 | None:intergenic | 45.0% | |
| !!! | CGTCCTCTCACTGGTTTTAA+TGG | - | chr1_2:4899803-4899822 | Msa0050870:five_prime_UTR | 45.0% |
| TCGCCATTAAAACCAGTGAG+AGG | + | chr1_2:4899809-4899828 | None:intergenic | 45.0% | |
| ! | GATTTTCACTTTGGCTGGGG+TGG | - | chr1_2:4898218-4898237 | Msa0050870:CDS | 50.0% |
| ! | CATCATGGTGGAACCACTAG+AGG | - | chr1_2:4898242-4898261 | Msa0050870:CDS | 50.0% |
| CTTGGAGAAGGCCATTGCTA+AGG | - | chr1_2:4898337-4898356 | Msa0050870:CDS | 50.0% | |
| AGGTCTGAGTCGCGACATAA+AGG | - | chr1_2:4898455-4898474 | Msa0050870:CDS | 50.0% | |
| ATTGTTGCCCTTGCTGCTAG+GGG | - | chr1_2:4898872-4898891 | Msa0050870:intron | 50.0% | |
| CCTAATGGTAGCTCCCAGTT+GGG | + | chr1_2:4899167-4899186 | None:intergenic | 50.0% | |
| TCCTAATGGTAGCTCCCAGT+TGG | + | chr1_2:4899168-4899187 | None:intergenic | 50.0% | |
| ACTGGGAGCTACCATTAGGA+AGG | - | chr1_2:4899168-4899187 | Msa0050870:CDS | 50.0% | |
| TCAATGTGCCCAAGATCAGG+TGG | - | chr1_2:4899563-4899582 | Msa0050870:intron | 50.0% | |
| ! | CAGATGAAGTGCTTCTCACG+GGG | - | chr1_2:4899681-4899700 | Msa0050870:CDS | 50.0% |
| GCTTCTCACGGGGAATGTTA+AGG | - | chr1_2:4899691-4899710 | Msa0050870:CDS | 50.0% | |
| ! | GATTTTCACTTTGGCTGGGG+TGG | - | chr1_2:4898218-4898237 | Msa0050870:CDS | 50.0% |
| ! | CATCATGGTGGAACCACTAG+AGG | - | chr1_2:4898242-4898261 | Msa0050870:CDS | 50.0% |
| CTTGGAGAAGGCCATTGCTA+AGG | - | chr1_2:4898337-4898356 | Msa0050870:CDS | 50.0% | |
| AGGTCTGAGTCGCGACATAA+AGG | - | chr1_2:4898455-4898474 | Msa0050870:CDS | 50.0% | |
| ATTGTTGCCCTTGCTGCTAG+GGG | - | chr1_2:4898872-4898891 | Msa0050870:intron | 50.0% | |
| CCTAATGGTAGCTCCCAGTT+GGG | + | chr1_2:4899167-4899186 | None:intergenic | 50.0% | |
| TCCTAATGGTAGCTCCCAGT+TGG | + | chr1_2:4899168-4899187 | None:intergenic | 50.0% | |
| ACTGGGAGCTACCATTAGGA+AGG | - | chr1_2:4899168-4899187 | Msa0050870:CDS | 50.0% | |
| TCAATGTGCCCAAGATCAGG+TGG | - | chr1_2:4899563-4899582 | Msa0050870:intron | 50.0% | |
| ! | CAGATGAAGTGCTTCTCACG+GGG | - | chr1_2:4899681-4899700 | Msa0050870:CDS | 50.0% |
| GCTTCTCACGGGGAATGTTA+AGG | - | chr1_2:4899691-4899710 | Msa0050870:CDS | 50.0% | |
| TTTGGCTGGGGTGGTCATCA+TGG | - | chr1_2:4898227-4898246 | Msa0050870:CDS | 55.0% | |
| TTACCTGCACGAAGCAGTCG+TGG | + | chr1_2:4898400-4898419 | None:intergenic | 55.0% | |
| AGTGGATCCCCTAGCAGCAA+GGG | + | chr1_2:4898882-4898901 | None:intergenic | 55.0% | |
| AACAGAGTGGAGGACCCAAC+TGG | - | chr1_2:4899150-4899169 | Msa0050870:CDS | 55.0% | |
| ACAGAGTGGAGGACCCAACT+GGG | - | chr1_2:4899151-4899170 | Msa0050870:CDS | 55.0% | |
| CCCAACTGGGAGCTACCATT+AGG | - | chr1_2:4899164-4899183 | Msa0050870:CDS | 55.0% | |
| GTAGACCTTGTTGCCCTCTC+AGG | - | chr1_2:4899299-4899318 | Msa0050870:CDS | 55.0% | |
| TTCCACCTGAGAGGGCAACA+AGG | + | chr1_2:4899307-4899326 | None:intergenic | 55.0% | |
| CTTGGGGAGCCAAAGTCCAA+GGG | + | chr1_2:4899605-4899624 | None:intergenic | 55.0% | |
| TCTTGGGGAGCCAAAGTCCA+AGG | + | chr1_2:4899606-4899625 | None:intergenic | 55.0% | |
| TTTGGCTGGGGTGGTCATCA+TGG | - | chr1_2:4898227-4898246 | Msa0050870:CDS | 55.0% | |
| TTACCTGCACGAAGCAGTCG+TGG | + | chr1_2:4898400-4898419 | None:intergenic | 55.0% | |
| AGTGGATCCCCTAGCAGCAA+GGG | + | chr1_2:4898882-4898901 | None:intergenic | 55.0% | |
| AACAGAGTGGAGGACCCAAC+TGG | - | chr1_2:4899150-4899169 | Msa0050870:CDS | 55.0% | |
| ACAGAGTGGAGGACCCAACT+GGG | - | chr1_2:4899151-4899170 | Msa0050870:CDS | 55.0% | |
| CCCAACTGGGAGCTACCATT+AGG | - | chr1_2:4899164-4899183 | Msa0050870:CDS | 55.0% | |
| GTAGACCTTGTTGCCCTCTC+AGG | - | chr1_2:4899299-4899318 | Msa0050870:CDS | 55.0% | |
| TTCCACCTGAGAGGGCAACA+AGG | + | chr1_2:4899307-4899326 | None:intergenic | 55.0% | |
| CTTGGGGAGCCAAAGTCCAA+GGG | + | chr1_2:4899605-4899624 | None:intergenic | 55.0% | |
| TCTTGGGGAGCCAAAGTCCA+AGG | + | chr1_2:4899606-4899625 | None:intergenic | 55.0% | |
| CTTCCACGACTGCTTCGTGC+AGG | - | chr1_2:4898394-4898413 | Msa0050870:CDS | 60.0% | |
| CAGTGGATCCCCTAGCAGCA+AGG | + | chr1_2:4898883-4898902 | None:intergenic | 60.0% | |
| GACCTTGTTGCCCTCTCAGG+TGG | - | chr1_2:4899302-4899321 | Msa0050870:CDS | 60.0% | |
| GGGAACCTTCGTCCTCTCAC+TGG | - | chr1_2:4899794-4899813 | Msa0050870:five_prime_UTR | 60.0% | |
| CTTCCACGACTGCTTCGTGC+AGG | - | chr1_2:4898394-4898413 | Msa0050870:CDS | 60.0% | |
| CAGTGGATCCCCTAGCAGCA+AGG | + | chr1_2:4898883-4898902 | None:intergenic | 60.0% | |
| GACCTTGTTGCCCTCTCAGG+TGG | - | chr1_2:4899302-4899321 | Msa0050870:CDS | 60.0% | |
| GGGAACCTTCGTCCTCTCAC+TGG | - | chr1_2:4899794-4899813 | Msa0050870:five_prime_UTR | 60.0% | |
| GGCTGGGGTGGTCATCATGG+TGG | - | chr1_2:4898230-4898249 | Msa0050870:CDS | 65.0% | |
| GGCTGGGGTGGTCATCATGG+TGG | - | chr1_2:4898230-4898249 | Msa0050870:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 4898189 | 4899856 | 4898189 | ID=Msa0050870;Name=Msa0050870 |
| chr1_2 | mRNA | 4898189 | 4899856 | 4898189 | ID=Msa0050870-mRNA-1;Parent=Msa0050870;Name=Msa0050870-mRNA-1;_AED=0.13;_eAED=0.14;_QI=77|0|0|1|1|0.75|4|0|306 |
| chr1_2 | exon | 4899630 | 4899856 | 4899630 | ID=Msa0050870-mRNA-1:exon:1391;Parent=Msa0050870-mRNA-1 |
| chr1_2 | exon | 4899138 | 4899329 | 4899138 | ID=Msa0050870-mRNA-1:exon:1390;Parent=Msa0050870-mRNA-1 |
| chr1_2 | exon | 4898725 | 4898890 | 4898725 | ID=Msa0050870-mRNA-1:exon:1389;Parent=Msa0050870-mRNA-1 |
| chr1_2 | exon | 4898189 | 4898598 | 4898189 | ID=Msa0050870-mRNA-1:exon:1388;Parent=Msa0050870-mRNA-1 |
| chr1_2 | five_prime_UTR | 4899780 | 4899856 | 4899780 | ID=Msa0050870-mRNA-1:five_prime_utr;Parent=Msa0050870-mRNA-1 |
| chr1_2 | CDS | 4899630 | 4899779 | 4899630 | ID=Msa0050870-mRNA-1:cds;Parent=Msa0050870-mRNA-1 |
| chr1_2 | CDS | 4899138 | 4899329 | 4899138 | ID=Msa0050870-mRNA-1:cds;Parent=Msa0050870-mRNA-1 |
| chr1_2 | CDS | 4898725 | 4898890 | 4898725 | ID=Msa0050870-mRNA-1:cds;Parent=Msa0050870-mRNA-1 |
| chr1_2 | CDS | 4898189 | 4898598 | 4898189 | ID=Msa0050870-mRNA-1:cds;Parent=Msa0050870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
