Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
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Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0078150 | sp|O23320|CML8_ARATH | 83.065 | 124 | 21 | 0 | 4 | 127 | 27 | 150 | 1.22e-72 | 216 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0078150 | A0A072VLW5 | 100.000 | 125 | 0 | 0 | 4 | 128 | 26 | 150 | 2.55e-83 | 249 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
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Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0078150 | Msa0090380 | 0.809881 | 1.519588e-50 | -8.615850e-47 |
Msa0078150 | Msa0125890 | 0.805903 | 1.066096e-49 | -8.615850e-47 |
Msa0078150 | Msa0137860 | 0.815588 | 8.559582e-52 | -8.615850e-47 |
Msa0078150 | Msa0170600 | 0.936620 | 1.296707e-97 | -8.615850e-47 |
Msa0078150 | Msa0187310 | 0.802946 | 4.406473e-49 | -8.615850e-47 |
Msa0078150 | Msa0224130 | 0.803618 | 3.199120e-49 | -8.615850e-47 |
Msa0078150 | Msa0228530 | 0.801128 | 1.042020e-48 | -8.615850e-47 |
Msa0078150 | Msa0265270 | 0.804338 | 2.265837e-49 | -8.615850e-47 |
Msa0078150 | Msa0482280 | 0.819864 | 9.281348e-53 | -8.615850e-47 |
Msa0078150 | Msa0484800 | 0.802343 | 5.869025e-49 | -8.615850e-47 |
Msa0078150 | Msa0590390 | 0.825952 | 3.540379e-54 | -8.615850e-47 |
Msa0078150 | Msa0945130 | 0.800921 | 1.148853e-48 | -8.615850e-47 |
Msa0078150 | Msa1089190 | 0.801137 | 1.037469e-48 | -8.615850e-47 |
Msa0078150 | Msa1258470 | 0.808994 | 2.356181e-50 | -8.615850e-47 |
Msa0078150 | Msa1258670 | 0.813160 | 2.946152e-51 | -8.615850e-47 |
Msa0078150 | Msa1364080 | 0.805160 | 1.526555e-49 | -8.615850e-47 |
Msa0078150 | Msa1413680 | 0.933989 | 8.077066e-96 | -8.615850e-47 |
Msa0078150 | Msa1433410 | 0.806164 | 9.395751e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0078150 | MtrunA17_Chr1g0188171 | 100.000 | 125 | 0 | 0 | 4 | 128 | 26 | 150 | 4.92e-87 | 249 |
Msa0078150 | MtrunA17_Chr1g0188171 | 43.548 | 62 | 35 | 0 | 63 | 124 | 12 | 73 | 1.41e-11 | 58.2 |
Msa0078150 | MtrunA17_Chr1g0166281 | 89.516 | 124 | 13 | 0 | 4 | 127 | 26 | 149 | 1.75e-77 | 225 |
Msa0078150 | MtrunA17_Chr1g0166281 | 43.548 | 62 | 35 | 0 | 63 | 124 | 12 | 73 | 4.41e-11 | 56.6 |
Msa0078150 | MtrunA17_Chr3g0093271 | 78.862 | 123 | 26 | 0 | 4 | 126 | 77 | 199 | 8.74e-70 | 208 |
Msa0078150 | MtrunA17_Chr3g0093271 | 44.595 | 74 | 40 | 1 | 51 | 124 | 52 | 124 | 1.68e-13 | 63.9 |
Msa0078150 | MtrunA17_Chr5g0440931 | 78.862 | 123 | 26 | 0 | 4 | 126 | 26 | 148 | 1.19e-69 | 206 |
Msa0078150 | MtrunA17_Chr5g0440931 | 46.774 | 62 | 33 | 0 | 63 | 124 | 12 | 73 | 3.19e-13 | 62.4 |
Msa0078150 | MtrunA17_Chr6g0460211 | 78.862 | 123 | 26 | 0 | 4 | 126 | 26 | 148 | 1.23e-69 | 206 |
Msa0078150 | MtrunA17_Chr6g0460211 | 44.595 | 74 | 40 | 1 | 51 | 124 | 1 | 73 | 2.00e-13 | 62.8 |
Msa0078150 | MtrunA17_Chr7g0254731 | 78.862 | 123 | 26 | 0 | 4 | 126 | 26 | 148 | 3.53e-69 | 204 |
Msa0078150 | MtrunA17_Chr7g0254731 | 44.595 | 74 | 40 | 1 | 51 | 124 | 1 | 73 | 1.48e-13 | 63.2 |
Msa0078150 | MtrunA17_Chr7g0274101 | 69.355 | 124 | 38 | 0 | 4 | 127 | 26 | 149 | 1.91e-51 | 159 |
Msa0078150 | MtrunA17_Chr1g0185001 | 59.016 | 122 | 49 | 1 | 4 | 125 | 26 | 146 | 1.00e-47 | 150 |
Msa0078150 | MtrunA17_Chr8g0366401 | 45.238 | 126 | 66 | 1 | 4 | 126 | 31 | 156 | 2.80e-34 | 116 |
Msa0078150 | MtrunA17_Chr1g0161211 | 50.000 | 122 | 61 | 0 | 4 | 125 | 60 | 181 | 7.93e-34 | 116 |
Msa0078150 | MtrunA17_Chr1g0161211 | 41.935 | 62 | 36 | 0 | 62 | 123 | 45 | 106 | 8.27e-12 | 59.7 |
Msa0078150 | MtrunA17_Chr4g0062221 | 43.651 | 126 | 63 | 2 | 4 | 124 | 25 | 147 | 4.27e-31 | 108 |
Msa0078150 | MtrunA17_Chr7g0245231 | 43.089 | 123 | 70 | 0 | 4 | 126 | 44 | 166 | 6.59e-31 | 108 |
Msa0078150 | MtrunA17_Chr7g0245231 | 47.619 | 63 | 33 | 0 | 62 | 124 | 29 | 91 | 4.66e-13 | 62.4 |
Msa0078150 | MtrunA17_Chr6g0450921 | 41.322 | 121 | 71 | 0 | 4 | 124 | 43 | 163 | 8.25e-29 | 103 |
Msa0078150 | MtrunA17_Chr6g0450921 | 43.836 | 73 | 41 | 0 | 52 | 124 | 18 | 90 | 2.82e-13 | 62.8 |
Msa0078150 | MtrunA17_Chr5g0398751 | 37.398 | 123 | 75 | 1 | 4 | 126 | 26 | 146 | 9.44e-29 | 102 |
Msa0078150 | MtrunA17_Chr8g0391691 | 46.154 | 117 | 63 | 0 | 4 | 120 | 50 | 166 | 3.88e-28 | 102 |
Msa0078150 | MtrunA17_Chr8g0391691 | 47.541 | 61 | 32 | 0 | 63 | 123 | 36 | 96 | 3.05e-12 | 60.5 |
Msa0078150 | MtrunA17_Chr8g0392951 | 47.107 | 121 | 63 | 1 | 4 | 124 | 38 | 157 | 2.30e-27 | 99.4 |
Msa0078150 | MtrunA17_Chr3g0100541 | 45.614 | 114 | 47 | 1 | 9 | 122 | 71 | 169 | 4.69e-27 | 99.0 |
Msa0078150 | MtrunA17_Chr8g0368681 | 40.650 | 123 | 71 | 1 | 4 | 124 | 26 | 148 | 6.96e-27 | 97.8 |
Msa0078150 | MtrunA17_Chr5g0434951 | 42.149 | 121 | 69 | 1 | 4 | 124 | 18 | 137 | 6.23e-25 | 92.4 |
Msa0078150 | MtrunA17_Chr5g0434951 | 40.909 | 66 | 39 | 0 | 61 | 126 | 2 | 67 | 7.00e-11 | 55.8 |
Msa0078150 | MtrunA17_Chr6g0482731 | 45.082 | 122 | 65 | 2 | 4 | 124 | 40 | 160 | 7.14e-25 | 93.2 |
Msa0078150 | MtrunA17_Chr1g0169581 | 41.463 | 123 | 70 | 1 | 4 | 124 | 18 | 140 | 1.91e-24 | 91.3 |
Msa0078150 | MtrunA17_Chr4g0033601 | 41.463 | 123 | 70 | 1 | 4 | 124 | 19 | 141 | 2.71e-23 | 88.6 |
Msa0078150 | MtrunA17_Chr7g0256701 | 44.444 | 126 | 65 | 3 | 4 | 124 | 87 | 212 | 3.05e-23 | 90.1 |
Msa0078150 | MtrunA17_Chr8g0351681 | 42.636 | 129 | 66 | 3 | 4 | 124 | 63 | 191 | 1.37e-22 | 87.8 |
Msa0078150 | MtrunA17_Chr3g0111371 | 44.628 | 121 | 63 | 2 | 4 | 124 | 19 | 135 | 1.92e-22 | 85.9 |
Msa0078150 | MtrunA17_Chr3g0111371 | 46.667 | 60 | 32 | 0 | 61 | 120 | 3 | 62 | 1.36e-11 | 57.8 |
Msa0078150 | MtrunA17_Chr7g0267751 | 41.322 | 121 | 68 | 2 | 4 | 124 | 454 | 571 | 6.56e-22 | 89.7 |
Msa0078150 | MtrunA17_Chr3g0100511 | 40.000 | 115 | 54 | 1 | 9 | 123 | 71 | 170 | 1.79e-20 | 81.6 |
Msa0078150 | MtrunA17_Chr1g0176751 | 38.017 | 121 | 72 | 2 | 4 | 124 | 443 | 560 | 2.96e-20 | 85.1 |
Msa0078150 | MtrunA17_Chr1g0200601 | 41.463 | 123 | 65 | 3 | 4 | 124 | 349 | 466 | 4.09e-20 | 84.7 |
Msa0078150 | MtrunA17_Chr7g0245911 | 37.879 | 132 | 73 | 3 | 4 | 126 | 61 | 192 | 1.07e-19 | 80.1 |
Msa0078150 | MtrunA17_Chr4g0064231 | 38.129 | 139 | 68 | 2 | 4 | 124 | 78 | 216 | 1.33e-19 | 80.9 |
Msa0078150 | MtrunA17_Chr5g0444171 | 37.097 | 124 | 74 | 3 | 4 | 126 | 411 | 531 | 1.70e-19 | 82.8 |
Msa0078150 | MtrunA17_Chr7g0242561 | 36.585 | 123 | 77 | 1 | 4 | 126 | 375 | 496 | 2.42e-19 | 82.4 |
Msa0078150 | MtrunA17_Chr8g0385341 | 38.017 | 121 | 72 | 2 | 4 | 124 | 349 | 466 | 2.79e-19 | 82.4 |
Msa0078150 | MtrunA17_Chr3g0100561 | 40.000 | 115 | 54 | 1 | 9 | 123 | 71 | 170 | 2.80e-19 | 78.6 |
Msa0078150 | MtrunA17_Chr3g0131181 | 37.190 | 121 | 73 | 2 | 4 | 124 | 348 | 465 | 3.54e-19 | 82.0 |
Msa0078150 | MtrunA17_Chr7g0256171 | 42.276 | 123 | 69 | 1 | 4 | 124 | 19 | 141 | 3.90e-19 | 77.8 |
Msa0078150 | MtrunA17_Chr4g0044961 | 36.364 | 121 | 75 | 1 | 4 | 124 | 71 | 189 | 4.33e-19 | 78.6 |
Msa0078150 | MtrunA17_Chr4g0059951 | 37.600 | 125 | 73 | 4 | 4 | 126 | 392 | 513 | 4.65e-19 | 81.6 |
Msa0078150 | MtrunA17_Chr0c02g0489761 | 36.585 | 123 | 72 | 3 | 4 | 124 | 397 | 515 | 5.48e-19 | 81.6 |
Msa0078150 | MtrunA17_Chr0c02g0489761 | 38.095 | 84 | 49 | 1 | 45 | 125 | 362 | 445 | 1.41e-11 | 60.5 |
Msa0078150 | MtrunA17_Chr5g0441691 | 36.585 | 123 | 72 | 3 | 4 | 124 | 387 | 505 | 7.43e-19 | 81.3 |
Msa0078150 | MtrunA17_Chr5g0402361 | 37.302 | 126 | 72 | 2 | 4 | 126 | 62 | 183 | 1.29e-18 | 79.7 |
Msa0078150 | MtrunA17_Chr5g0402361 | 35.433 | 127 | 74 | 3 | 4 | 126 | 234 | 356 | 1.12e-16 | 74.3 |
Msa0078150 | MtrunA17_Chr1g0169621 | 34.000 | 150 | 72 | 2 | 4 | 126 | 18 | 167 | 1.58e-18 | 76.6 |
Msa0078150 | MtrunA17_Chr8g0387671 | 35.772 | 123 | 73 | 3 | 4 | 124 | 385 | 503 | 2.01e-18 | 79.7 |
Msa0078150 | MtrunA17_Chr1g0170281 | 37.190 | 121 | 73 | 2 | 4 | 124 | 437 | 554 | 2.31e-18 | 79.7 |
Msa0078150 | MtrunA17_Chr4g0074811 | 34.677 | 124 | 77 | 3 | 4 | 126 | 410 | 530 | 3.32e-18 | 79.3 |
Msa0078150 | MtrunA17_Chr1g0157131 | 35.246 | 122 | 75 | 3 | 4 | 124 | 393 | 511 | 4.20e-18 | 79.0 |
Msa0078150 | MtrunA17_Chr5g0448721 | 36.364 | 121 | 74 | 2 | 4 | 124 | 415 | 532 | 4.47e-18 | 79.0 |
Msa0078150 | MtrunA17_Chr5g0397101 | 34.959 | 123 | 74 | 3 | 4 | 124 | 385 | 503 | 4.60e-18 | 79.0 |
Msa0078150 | MtrunA17_Chr7g0225921 | 32.520 | 123 | 81 | 2 | 4 | 125 | 20 | 141 | 6.12e-18 | 74.3 |
Msa0078150 | MtrunA17_Chr3g0116141 | 34.127 | 126 | 72 | 2 | 4 | 124 | 19 | 138 | 6.43e-18 | 74.3 |
Msa0078150 | MtrunA17_Chr3g0116151 | 34.127 | 126 | 72 | 2 | 4 | 124 | 20 | 139 | 6.73e-18 | 74.3 |
Msa0078150 | MtrunA17_Chr5g0402331 | 35.433 | 127 | 74 | 3 | 4 | 126 | 62 | 184 | 9.26e-18 | 75.1 |
Msa0078150 | MtrunA17_Chr3g0100461 | 57.407 | 54 | 23 | 0 | 71 | 124 | 53 | 106 | 1.07e-17 | 73.2 |
Msa0078150 | MtrunA17_Chr6g0459231 | 33.607 | 122 | 80 | 1 | 4 | 125 | 22 | 142 | 1.18e-16 | 71.2 |
Msa0078150 | MtrunA17_Chr3g0098951 | 34.351 | 131 | 75 | 3 | 4 | 126 | 402 | 529 | 1.75e-16 | 74.3 |
Msa0078150 | MtrunA17_Chr3g0100501 | 49.180 | 61 | 31 | 0 | 62 | 122 | 71 | 131 | 3.18e-16 | 70.1 |
Msa0078150 | MtrunA17_Chr4g0057641 | 34.400 | 125 | 73 | 2 | 4 | 124 | 20 | 139 | 1.87e-15 | 67.8 |
Msa0078150 | MtrunA17_Chr5g0409441 | 32.479 | 117 | 79 | 0 | 4 | 120 | 36 | 152 | 2.14e-15 | 68.2 |
Msa0078150 | MtrunA17_Chr7g0245371 | 36.842 | 133 | 72 | 2 | 6 | 126 | 40 | 172 | 2.86e-15 | 68.2 |
Msa0078150 | MtrunA17_Chr4g0057661 | 33.600 | 125 | 74 | 2 | 4 | 124 | 20 | 139 | 3.22e-15 | 67.4 |
Msa0078150 | MtrunA17_Chr4g0033371 | 33.871 | 124 | 80 | 2 | 3 | 126 | 390 | 511 | 3.55e-15 | 70.5 |
Msa0078150 | MtrunA17_Chr2g0329371 | 38.400 | 125 | 73 | 2 | 4 | 124 | 78 | 202 | 4.90e-15 | 68.6 |
Msa0078150 | MtrunA17_Chr4g0057651 | 33.600 | 125 | 74 | 2 | 4 | 124 | 20 | 139 | 5.68e-15 | 66.6 |
Msa0078150 | MtrunA17_Chr5g0396261 | 34.513 | 113 | 70 | 3 | 14 | 123 | 1 | 112 | 4.75e-14 | 63.5 |
Msa0078150 | MtrunA17_Chr7g0257751 | 31.707 | 123 | 79 | 2 | 4 | 124 | 377 | 496 | 4.94e-14 | 67.4 |
Msa0078150 | MtrunA17_Chr8g0373691 | 50.000 | 64 | 32 | 0 | 61 | 124 | 51 | 114 | 1.18e-13 | 64.3 |
Msa0078150 | MtrunA17_Chr8g0373691 | 32.787 | 122 | 80 | 2 | 4 | 124 | 67 | 187 | 1.61e-13 | 63.9 |
Msa0078150 | MtrunA17_Chr4g0074791 | 31.148 | 122 | 70 | 4 | 4 | 124 | 414 | 522 | 1.35e-13 | 66.2 |
Msa0078150 | MtrunA17_Chr3g0121191 | 29.688 | 128 | 64 | 1 | 24 | 125 | 91 | 218 | 2.11e-13 | 64.3 |
Msa0078150 | MtrunA17_Chr3g0100471 | 52.000 | 50 | 24 | 0 | 4 | 53 | 66 | 115 | 1.86e-12 | 59.7 |
Msa0078150 | MtrunA17_Chr1g0173541 | 28.099 | 121 | 86 | 1 | 4 | 124 | 371 | 490 | 3.81e-12 | 62.0 |
Msa0078150 | MtrunA17_Chr3g0125311 | 29.496 | 139 | 80 | 3 | 2 | 125 | 25 | 160 | 6.72e-12 | 59.3 |
Msa0078150 | MtrunA17_Chr8g0388331 | 33.071 | 127 | 72 | 3 | 4 | 120 | 50 | 173 | 1.00e-11 | 59.7 |
Msa0078150 | MtrunA17_Chr4g0042491 | 40.541 | 74 | 44 | 0 | 51 | 124 | 102 | 175 | 3.68e-11 | 57.4 |
Msa0078150 | MtrunA17_Chr5g0408251 | 47.692 | 65 | 32 | 1 | 62 | 124 | 131 | 195 | 5.24e-11 | 57.4 |
Msa0078150 | MtrunA17_Chr4g0068501 | 27.481 | 131 | 83 | 3 | 2 | 124 | 28 | 154 | 8.56e-11 | 56.2 |
Msa0078150 | MtrunA17_Chr1g0176421 | 27.451 | 153 | 76 | 3 | 4 | 124 | 480 | 629 | 9.19e-11 | 58.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0078150 | AT4G14640.2 | 83.065 | 124 | 21 | 0 | 4 | 127 | 9 | 132 | 2.52e-74 | 217 |
Msa0078150 | AT4G14640.1 | 83.065 | 124 | 21 | 0 | 4 | 127 | 27 | 150 | 1.24e-73 | 216 |
Msa0078150 | AT3G22930.1 | 83.607 | 122 | 20 | 0 | 4 | 125 | 49 | 170 | 4.78e-73 | 215 |
Msa0078150 | AT5G37780.3 | 77.778 | 126 | 28 | 0 | 1 | 126 | 49 | 174 | 6.47e-71 | 210 |
Msa0078150 | AT2G27030.3 | 79.200 | 125 | 26 | 0 | 4 | 128 | 26 | 150 | 1.73e-70 | 209 |
Msa0078150 | AT2G27030.3 | 44.595 | 74 | 40 | 1 | 51 | 124 | 1 | 73 | 7.54e-13 | 62.4 |
Msa0078150 | AT3G56800.1 | 79.675 | 123 | 25 | 0 | 4 | 126 | 26 | 148 | 6.78e-70 | 206 |
Msa0078150 | AT3G56800.1 | 44.595 | 74 | 40 | 1 | 51 | 124 | 1 | 73 | 2.67e-13 | 62.8 |
Msa0078150 | AT2G41110.1 | 79.675 | 123 | 25 | 0 | 4 | 126 | 26 | 148 | 6.78e-70 | 206 |
Msa0078150 | AT2G41110.1 | 44.595 | 74 | 40 | 1 | 51 | 124 | 1 | 73 | 2.67e-13 | 62.8 |
Msa0078150 | AT2G27030.1 | 79.675 | 123 | 25 | 0 | 4 | 126 | 26 | 148 | 6.78e-70 | 206 |
Msa0078150 | AT2G27030.1 | 44.595 | 74 | 40 | 1 | 51 | 124 | 1 | 73 | 2.67e-13 | 62.8 |
Msa0078150 | AT5G21274.1 | 79.675 | 123 | 25 | 0 | 4 | 126 | 26 | 148 | 6.78e-70 | 206 |
Msa0078150 | AT5G21274.1 | 44.595 | 74 | 40 | 1 | 51 | 124 | 1 | 73 | 3.07e-13 | 62.8 |
Msa0078150 | AT5G37780.4 | 78.862 | 123 | 26 | 0 | 4 | 126 | 13 | 135 | 7.66e-70 | 206 |
Msa0078150 | AT2G41110.2 | 79.675 | 123 | 25 | 0 | 4 | 126 | 38 | 160 | 8.15e-70 | 207 |
Msa0078150 | AT1G66410.1 | 78.862 | 123 | 26 | 0 | 4 | 126 | 26 | 148 | 1.19e-69 | 206 |
Msa0078150 | AT1G66410.1 | 46.774 | 62 | 33 | 0 | 63 | 124 | 12 | 73 | 4.31e-13 | 62.4 |
Msa0078150 | AT5G37780.1 | 78.862 | 123 | 26 | 0 | 4 | 126 | 26 | 148 | 1.19e-69 | 206 |
Msa0078150 | AT5G37780.1 | 46.774 | 62 | 33 | 0 | 63 | 124 | 12 | 73 | 4.31e-13 | 62.4 |
Msa0078150 | AT1G66410.2 | 78.862 | 123 | 26 | 0 | 4 | 126 | 36 | 158 | 1.52e-69 | 206 |
Msa0078150 | AT3G43810.1 | 78.862 | 123 | 26 | 0 | 4 | 126 | 26 | 148 | 1.70e-69 | 206 |
Msa0078150 | AT3G43810.1 | 44.595 | 74 | 40 | 1 | 51 | 124 | 1 | 73 | 2.76e-13 | 62.8 |
Msa0078150 | AT5G37780.2 | 78.862 | 123 | 26 | 0 | 4 | 126 | 41 | 163 | 2.39e-69 | 206 |
Msa0078150 | AT3G43810.2 | 78.862 | 123 | 26 | 0 | 4 | 126 | 26 | 148 | 5.46e-69 | 207 |
Msa0078150 | AT3G43810.2 | 44.595 | 74 | 40 | 1 | 51 | 124 | 1 | 73 | 3.14e-13 | 63.9 |
Msa0078150 | AT1G66410.4 | 79.464 | 112 | 23 | 0 | 15 | 126 | 1 | 112 | 2.69e-63 | 189 |
Msa0078150 | AT1G66410.3 | 79.464 | 112 | 23 | 0 | 15 | 126 | 1 | 112 | 2.69e-63 | 189 |
Msa0078150 | AT3G43810.4 | 79.464 | 112 | 23 | 0 | 15 | 126 | 1 | 112 | 3.78e-63 | 188 |
Msa0078150 | AT3G43810.3 | 79.464 | 112 | 23 | 0 | 15 | 126 | 1 | 112 | 3.78e-63 | 188 |
Msa0078150 | AT4G14640.3 | 81.707 | 82 | 15 | 0 | 4 | 85 | 27 | 108 | 1.04e-45 | 144 |
Msa0078150 | AT3G22930.2 | 79.518 | 83 | 17 | 0 | 4 | 86 | 49 | 131 | 9.42e-45 | 142 |
Msa0078150 | AT3G22930.2 | 43.548 | 62 | 35 | 0 | 63 | 124 | 35 | 96 | 2.60e-11 | 57.4 |
Msa0078150 | AT2G41090.1 | 50.820 | 122 | 57 | 1 | 4 | 125 | 26 | 144 | 9.75e-36 | 121 |
Msa0078150 | AT3G51920.1 | 48.780 | 123 | 63 | 0 | 4 | 126 | 26 | 148 | 1.81e-34 | 117 |
Msa0078150 | AT2G41100.7 | 47.101 | 138 | 56 | 1 | 4 | 124 | 80 | 217 | 1.31e-32 | 116 |
Msa0078150 | AT2G41100.7 | 40.945 | 127 | 59 | 2 | 14 | 124 | 1 | 127 | 5.58e-26 | 99.0 |
Msa0078150 | AT2G41100.7 | 50.000 | 72 | 33 | 1 | 4 | 75 | 170 | 238 | 1.44e-14 | 68.6 |
Msa0078150 | AT2G41100.6 | 47.101 | 138 | 56 | 1 | 4 | 124 | 80 | 217 | 1.31e-32 | 116 |
Msa0078150 | AT2G41100.6 | 40.945 | 127 | 59 | 2 | 14 | 124 | 1 | 127 | 5.58e-26 | 99.0 |
Msa0078150 | AT2G41100.6 | 50.000 | 72 | 33 | 1 | 4 | 75 | 170 | 238 | 1.44e-14 | 68.6 |
Msa0078150 | AT2G41100.3 | 47.101 | 138 | 56 | 1 | 4 | 124 | 80 | 217 | 1.31e-32 | 116 |
Msa0078150 | AT2G41100.3 | 40.945 | 127 | 59 | 2 | 14 | 124 | 1 | 127 | 5.58e-26 | 99.0 |
Msa0078150 | AT2G41100.3 | 50.000 | 72 | 33 | 1 | 4 | 75 | 170 | 238 | 1.44e-14 | 68.6 |
Msa0078150 | AT2G41100.4 | 47.101 | 138 | 56 | 1 | 4 | 124 | 115 | 252 | 2.62e-32 | 116 |
Msa0078150 | AT2G41100.4 | 42.336 | 137 | 63 | 2 | 4 | 124 | 26 | 162 | 4.46e-30 | 110 |
Msa0078150 | AT2G41100.4 | 50.000 | 72 | 33 | 1 | 4 | 75 | 205 | 273 | 1.87e-14 | 68.6 |
Msa0078150 | AT2G41100.4 | 43.243 | 74 | 41 | 1 | 51 | 124 | 1 | 73 | 1.92e-12 | 62.8 |
Msa0078150 | AT2G41100.1 | 47.101 | 138 | 56 | 1 | 4 | 124 | 115 | 252 | 2.62e-32 | 116 |
Msa0078150 | AT2G41100.1 | 42.336 | 137 | 63 | 2 | 4 | 124 | 26 | 162 | 4.46e-30 | 110 |
Msa0078150 | AT2G41100.1 | 50.000 | 72 | 33 | 1 | 4 | 75 | 205 | 273 | 1.87e-14 | 68.6 |
Msa0078150 | AT2G41100.1 | 43.243 | 74 | 41 | 1 | 51 | 124 | 1 | 73 | 1.92e-12 | 62.8 |
Msa0078150 | AT1G66400.1 | 48.387 | 124 | 62 | 1 | 4 | 125 | 29 | 152 | 4.73e-32 | 111 |
Msa0078150 | AT3G50360.1 | 43.802 | 121 | 68 | 0 | 4 | 124 | 41 | 161 | 1.79e-31 | 110 |
Msa0078150 | AT3G50360.1 | 46.269 | 67 | 36 | 0 | 58 | 124 | 22 | 88 | 9.37e-14 | 64.7 |
Msa0078150 | AT2G41100.2 | 46.400 | 125 | 50 | 1 | 17 | 124 | 3 | 127 | 3.91e-29 | 105 |
Msa0078150 | AT2G41100.2 | 50.000 | 72 | 33 | 1 | 4 | 75 | 80 | 148 | 3.52e-15 | 68.9 |
Msa0078150 | AT1G18530.1 | 41.270 | 126 | 66 | 2 | 4 | 124 | 21 | 143 | 5.96e-29 | 103 |
Msa0078150 | AT5G37770.1 | 46.400 | 125 | 63 | 1 | 4 | 124 | 31 | 155 | 7.80e-29 | 103 |
Msa0078150 | AT5G37770.2 | 46.400 | 125 | 63 | 1 | 4 | 124 | 31 | 155 | 7.80e-29 | 103 |
Msa0078150 | AT1G32250.1 | 39.370 | 127 | 71 | 1 | 4 | 124 | 30 | 156 | 2.31e-28 | 102 |
Msa0078150 | AT1G24620.1 | 45.161 | 124 | 67 | 1 | 4 | 127 | 51 | 173 | 6.28e-28 | 101 |
Msa0078150 | AT1G62820.1 | 36.585 | 123 | 76 | 1 | 4 | 126 | 27 | 147 | 9.35e-28 | 100 |
Msa0078150 | AT4G37010.1 | 40.496 | 121 | 72 | 0 | 4 | 124 | 41 | 161 | 1.72e-27 | 100 |
Msa0078150 | AT4G37010.1 | 43.750 | 64 | 36 | 0 | 63 | 126 | 27 | 90 | 5.51e-11 | 57.4 |
Msa0078150 | AT4G37010.2 | 40.496 | 121 | 72 | 0 | 4 | 124 | 45 | 165 | 1.77e-27 | 100 |
Msa0078150 | AT4G37010.2 | 43.750 | 64 | 36 | 0 | 63 | 126 | 31 | 94 | 5.75e-11 | 57.4 |
Msa0078150 | AT1G12310.1 | 35.772 | 123 | 77 | 1 | 4 | 126 | 27 | 147 | 3.96e-27 | 98.6 |
Msa0078150 | AT3G03000.1 | 37.857 | 140 | 66 | 2 | 8 | 126 | 18 | 157 | 9.98e-27 | 97.8 |
Msa0078150 | AT1G18210.2 | 43.802 | 121 | 64 | 1 | 4 | 124 | 37 | 153 | 7.45e-26 | 95.9 |
Msa0078150 | AT1G18210.1 | 43.802 | 121 | 64 | 1 | 4 | 124 | 37 | 153 | 7.45e-26 | 95.9 |
Msa0078150 | AT3G25600.1 | 38.095 | 126 | 70 | 2 | 4 | 124 | 26 | 148 | 2.91e-24 | 91.7 |
Msa0078150 | AT1G73630.1 | 41.463 | 123 | 68 | 1 | 4 | 126 | 34 | 152 | 3.75e-24 | 91.3 |
Msa0078150 | AT1G05990.1 | 39.516 | 124 | 72 | 2 | 4 | 124 | 19 | 142 | 3.69e-21 | 83.2 |
Msa0078150 | AT1G05990.1 | 43.077 | 65 | 37 | 0 | 63 | 127 | 5 | 69 | 2.94e-11 | 57.8 |
Msa0078150 | AT2G15680.1 | 37.398 | 123 | 75 | 1 | 4 | 126 | 64 | 184 | 1.60e-20 | 82.4 |
Msa0078150 | AT5G23580.1 | 39.669 | 121 | 70 | 2 | 4 | 124 | 341 | 458 | 2.92e-20 | 85.5 |
Msa0078150 | AT1G76040.1 | 37.190 | 121 | 74 | 2 | 4 | 124 | 192 | 310 | 3.94e-20 | 84.0 |
Msa0078150 | AT1G76040.4 | 37.190 | 121 | 74 | 2 | 4 | 124 | 192 | 310 | 3.94e-20 | 84.0 |
Msa0078150 | AT4G38230.1 | 38.843 | 121 | 71 | 2 | 4 | 124 | 199 | 316 | 5.14e-20 | 84.0 |
Msa0078150 | AT4G38230.4 | 38.843 | 121 | 71 | 2 | 4 | 124 | 343 | 460 | 7.19e-20 | 84.3 |
Msa0078150 | AT4G38230.3 | 38.843 | 121 | 71 | 2 | 4 | 124 | 343 | 460 | 7.19e-20 | 84.3 |
Msa0078150 | AT4G38230.2 | 38.843 | 121 | 71 | 2 | 4 | 124 | 373 | 490 | 7.49e-20 | 84.3 |
Msa0078150 | AT4G04700.1 | 40.323 | 124 | 70 | 3 | 4 | 126 | 350 | 470 | 8.94e-20 | 84.0 |
Msa0078150 | AT1G35670.1 | 39.669 | 121 | 70 | 2 | 4 | 124 | 345 | 462 | 8.98e-20 | 84.0 |
Msa0078150 | AT4G04720.2 | 37.903 | 124 | 73 | 3 | 4 | 126 | 398 | 518 | 1.16e-19 | 84.0 |
Msa0078150 | AT4G04720.1 | 37.903 | 124 | 73 | 3 | 4 | 126 | 398 | 518 | 1.16e-19 | 84.0 |
Msa0078150 | AT1G76040.2 | 37.190 | 121 | 74 | 2 | 4 | 124 | 430 | 548 | 1.18e-19 | 84.0 |
Msa0078150 | AT5G12180.1 | 39.344 | 122 | 70 | 3 | 4 | 124 | 392 | 510 | 1.19e-19 | 84.0 |
Msa0078150 | AT5G12180.1 | 37.209 | 86 | 51 | 1 | 45 | 127 | 357 | 442 | 5.92e-11 | 58.9 |
Msa0078150 | AT2G43290.1 | 38.281 | 128 | 72 | 3 | 4 | 124 | 79 | 206 | 1.23e-19 | 80.9 |
Msa0078150 | AT4G04695.1 | 37.903 | 124 | 73 | 3 | 4 | 126 | 350 | 470 | 1.29e-19 | 83.6 |
Msa0078150 | AT4G09570.1 | 40.650 | 123 | 66 | 3 | 4 | 124 | 344 | 461 | 1.96e-19 | 83.2 |
Msa0078150 | AT5G17470.1 | 37.398 | 123 | 75 | 1 | 4 | 124 | 16 | 138 | 2.22e-19 | 78.6 |
Msa0078150 | AT2G17290.1 | 38.017 | 121 | 72 | 2 | 4 | 124 | 404 | 521 | 2.91e-19 | 82.8 |
Msa0078150 | AT2G17290.2 | 38.017 | 121 | 72 | 2 | 4 | 124 | 404 | 521 | 2.91e-19 | 82.8 |
Msa0078150 | AT5G19360.1 | 38.525 | 122 | 71 | 3 | 4 | 124 | 387 | 505 | 3.22e-19 | 82.4 |
Msa0078150 | AT5G19360.1 | 37.209 | 86 | 51 | 1 | 45 | 127 | 352 | 437 | 7.75e-11 | 58.5 |
Msa0078150 | AT4G04740.4 | 37.705 | 122 | 72 | 3 | 4 | 124 | 387 | 505 | 4.14e-19 | 82.0 |
Msa0078150 | AT4G04740.6 | 37.705 | 122 | 72 | 3 | 4 | 124 | 387 | 505 | 4.14e-19 | 82.0 |
Msa0078150 | AT4G04740.5 | 37.705 | 122 | 72 | 3 | 4 | 124 | 387 | 505 | 4.14e-19 | 82.0 |
Msa0078150 | AT4G04740.3 | 37.705 | 122 | 72 | 3 | 4 | 124 | 387 | 505 | 4.14e-19 | 82.0 |
Msa0078150 | AT4G04740.1 | 37.705 | 122 | 72 | 3 | 4 | 124 | 387 | 505 | 4.14e-19 | 82.0 |
Msa0078150 | AT4G04740.7 | 37.705 | 122 | 72 | 3 | 4 | 124 | 387 | 505 | 4.14e-19 | 82.0 |
Msa0078150 | AT3G10190.1 | 39.024 | 123 | 72 | 3 | 4 | 124 | 84 | 205 | 4.86e-19 | 79.3 |
Msa0078150 | AT2G41410.1 | 38.889 | 126 | 74 | 3 | 4 | 126 | 84 | 209 | 6.69e-19 | 79.0 |
Msa0078150 | AT4G21940.1 | 36.290 | 124 | 75 | 3 | 4 | 126 | 420 | 540 | 1.22e-18 | 80.9 |
Msa0078150 | AT4G21940.2 | 36.290 | 124 | 75 | 3 | 4 | 126 | 420 | 540 | 1.25e-18 | 80.9 |
Msa0078150 | AT3G03400.1 | 36.207 | 116 | 72 | 1 | 4 | 117 | 19 | 134 | 1.98e-18 | 75.9 |
Msa0078150 | AT3G10660.2 | 35.537 | 121 | 75 | 2 | 4 | 124 | 505 | 622 | 2.42e-18 | 80.1 |
Msa0078150 | AT3G10660.1 | 35.537 | 121 | 75 | 2 | 4 | 124 | 505 | 622 | 2.42e-18 | 80.1 |
Msa0078150 | AT3G59440.1 | 37.600 | 125 | 75 | 2 | 4 | 126 | 65 | 188 | 3.08e-18 | 77.0 |
Msa0078150 | AT1G61950.1 | 36.000 | 125 | 74 | 3 | 4 | 126 | 418 | 538 | 3.79e-18 | 79.3 |
Msa0078150 | AT5G04870.1 | 35.537 | 121 | 75 | 2 | 4 | 124 | 469 | 586 | 4.37e-18 | 79.3 |
Msa0078150 | AT4G23650.1 | 35.772 | 123 | 73 | 3 | 4 | 124 | 397 | 515 | 5.98e-18 | 79.0 |
Msa0078150 | AT4G23650.1 | 41.463 | 82 | 44 | 1 | 48 | 125 | 364 | 445 | 3.51e-12 | 62.4 |
Msa0078150 | AT4G12860.1 | 38.211 | 123 | 74 | 1 | 4 | 124 | 19 | 141 | 6.57e-18 | 75.1 |
Msa0078150 | AT2G36180.1 | 41.129 | 124 | 70 | 2 | 4 | 124 | 14 | 137 | 7.15e-18 | 74.7 |
Msa0078150 | AT4G35310.2 | 35.537 | 121 | 75 | 2 | 4 | 124 | 416 | 533 | 7.71e-18 | 78.6 |
Msa0078150 | AT4G35310.1 | 35.537 | 121 | 75 | 2 | 4 | 124 | 416 | 533 | 7.71e-18 | 78.6 |
Msa0078150 | AT3G50770.1 | 35.714 | 126 | 76 | 2 | 4 | 124 | 78 | 203 | 1.32e-17 | 75.5 |
Msa0078150 | AT3G50770.1 | 46.154 | 65 | 35 | 0 | 60 | 124 | 61 | 125 | 4.34e-13 | 63.5 |
Msa0078150 | AT4G03290.1 | 36.508 | 126 | 75 | 2 | 4 | 124 | 19 | 144 | 1.51e-17 | 73.9 |
Msa0078150 | AT1G50700.1 | 33.333 | 123 | 80 | 2 | 4 | 126 | 392 | 512 | 4.31e-17 | 76.6 |
Msa0078150 | AT3G07490.1 | 39.837 | 123 | 72 | 1 | 4 | 124 | 19 | 141 | 5.50e-17 | 72.8 |
Msa0078150 | AT3G20410.2 | 33.333 | 123 | 80 | 2 | 4 | 126 | 410 | 530 | 6.67e-17 | 75.9 |
Msa0078150 | AT3G20410.1 | 33.333 | 123 | 80 | 2 | 4 | 126 | 410 | 530 | 6.67e-17 | 75.9 |
Msa0078150 | AT2G41100.5 | 50.000 | 74 | 36 | 1 | 51 | 124 | 1 | 73 | 7.29e-17 | 72.0 |
Msa0078150 | AT2G41100.5 | 50.000 | 72 | 33 | 1 | 4 | 75 | 26 | 94 | 8.67e-16 | 69.3 |
Msa0078150 | AT5G42380.1 | 35.246 | 122 | 78 | 1 | 4 | 124 | 63 | 184 | 1.10e-16 | 72.4 |
Msa0078150 | AT5G42380.1 | 46.774 | 62 | 33 | 0 | 63 | 124 | 49 | 110 | 9.79e-12 | 59.7 |
Msa0078150 | AT3G03410.1 | 32.787 | 122 | 73 | 1 | 4 | 125 | 16 | 128 | 1.58e-16 | 70.9 |
Msa0078150 | AT3G51850.1 | 34.146 | 123 | 80 | 1 | 4 | 126 | 373 | 494 | 1.80e-16 | 74.7 |
Msa0078150 | AT4G20780.1 | 35.862 | 145 | 71 | 3 | 4 | 127 | 43 | 186 | 4.68e-16 | 70.9 |
Msa0078150 | AT2G38910.1 | 33.884 | 121 | 77 | 2 | 4 | 124 | 453 | 570 | 7.70e-16 | 72.8 |
Msa0078150 | AT5G12480.2 | 34.426 | 122 | 78 | 2 | 4 | 124 | 284 | 404 | 8.67e-16 | 72.8 |
Msa0078150 | AT1G74740.1 | 33.607 | 122 | 78 | 3 | 4 | 124 | 378 | 497 | 8.80e-16 | 72.8 |
Msa0078150 | AT5G12480.1 | 34.426 | 122 | 78 | 2 | 4 | 124 | 378 | 498 | 9.04e-16 | 72.8 |
Msa0078150 | AT3G57530.1 | 35.714 | 126 | 73 | 4 | 4 | 126 | 382 | 502 | 3.25e-15 | 71.2 |
Msa0078150 | AT5G44460.1 | 37.956 | 137 | 71 | 4 | 4 | 127 | 42 | 177 | 3.92e-15 | 68.6 |
Msa0078150 | AT4G04710.2 | 34.426 | 122 | 76 | 3 | 4 | 124 | 351 | 469 | 5.87e-15 | 70.5 |
Msa0078150 | AT4G04710.3 | 34.426 | 122 | 76 | 3 | 4 | 124 | 337 | 455 | 6.05e-15 | 70.5 |
Msa0078150 | AT4G04710.1 | 34.426 | 122 | 76 | 3 | 4 | 124 | 364 | 482 | 6.83e-15 | 70.1 |
Msa0078150 | AT2G31500.1 | 33.071 | 127 | 81 | 3 | 3 | 126 | 384 | 509 | 9.02e-15 | 69.7 |
Msa0078150 | AT2G41860.1 | 31.707 | 123 | 83 | 1 | 4 | 126 | 373 | 494 | 1.72e-14 | 68.9 |
Msa0078150 | AT2G41860.2 | 31.707 | 123 | 83 | 1 | 4 | 126 | 373 | 494 | 1.75e-14 | 68.9 |
Msa0078150 | AT4G04710.4 | 34.677 | 124 | 75 | 4 | 4 | 124 | 364 | 484 | 1.09e-13 | 66.6 |
Msa0078150 | AT1G18890.1 | 34.127 | 126 | 72 | 4 | 4 | 124 | 382 | 501 | 1.89e-13 | 66.2 |
Msa0078150 | AT5G19450.2 | 32.787 | 122 | 80 | 2 | 4 | 124 | 376 | 496 | 2.16e-13 | 65.9 |
Msa0078150 | AT5G19450.1 | 32.787 | 122 | 80 | 2 | 4 | 124 | 376 | 496 | 2.16e-13 | 65.9 |
Msa0078150 | AT4G04740.2 | 36.111 | 108 | 65 | 3 | 4 | 110 | 387 | 491 | 3.82e-13 | 65.1 |
Msa0078150 | AT1G50700.2 | 28.188 | 149 | 79 | 3 | 4 | 126 | 392 | 538 | 1.18e-12 | 63.9 |
Msa0078150 | AT1G76640.1 | 32.000 | 125 | 79 | 2 | 4 | 124 | 36 | 158 | 1.75e-12 | 60.8 |
Msa0078150 | AT3G51850.2 | 38.272 | 81 | 49 | 1 | 4 | 84 | 373 | 452 | 1.21e-11 | 60.8 |
Msa0078150 | AT1G21550.1 | 31.884 | 138 | 74 | 4 | 4 | 127 | 24 | 155 | 2.13e-11 | 58.2 |
Msa0078150 | AT1G76650.1 | 32.258 | 124 | 77 | 2 | 4 | 124 | 57 | 176 | 5.56e-11 | 57.4 |
Msa0078150 | AT1G76650.3 | 32.258 | 124 | 77 | 2 | 4 | 124 | 57 | 176 | 5.56e-11 | 57.4 |
Msa0078150 | AT2G17890.1 | 28.462 | 130 | 81 | 5 | 3 | 126 | 428 | 551 | 6.23e-11 | 58.9 |
Find 28 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAAAATACAACAACGATTT+TGG | 0.109408 | 1_2:+55497964 | None:intergenic |
GCTTAAAAGAATAACAATTT+TGG | 0.121932 | 1_2:+55497853 | None:intergenic |
TGATGAGTTCTTGAACTTGA+TGG | 0.326901 | 1_2:-55499244 | Msa0078150:CDS |
AGCCACTGTTATCAGGTCAT+TGG | 0.372626 | 1_2:-55499343 | Msa0078150:CDS |
GATGATTAAAGAAGCAGATA+TGG | 0.394958 | 1_2:-55498126 | Msa0078150:CDS |
TCATCTCAATTGGAGGATAT+TGG | 0.401466 | 1_2:-55498029 | Msa0078150:three_prime_UTR |
GGAGCTTAGAGAGGCTTTCA+AGG | 0.423469 | 1_2:-55499020 | Msa0078150:CDS |
GTCTTTGACAAAGATCAAAA+TGG | 0.424272 | 1_2:-55498998 | Msa0078150:CDS |
CAAGAACTCATCAAATTCAA+TGG | 0.434228 | 1_2:+55499254 | None:intergenic |
AAGAATTAGCCACTGTTATC+AGG | 0.445790 | 1_2:-55499350 | Msa0078150:CDS |
TATTGGTCATTCAAATTCGT+TGG | 0.447181 | 1_2:-55498012 | Msa0078150:three_prime_UTR |
TCTTGTAGCTCTTCTTCAGT+GGG | 0.469600 | 1_2:+55499312 | None:intergenic |
AGTTCTTGAACTTGATGGCT+AGG | 0.482060 | 1_2:-55499239 | Msa0078150:CDS |
GTGGTTAACTAACTAATGCT+TGG | 0.505143 | 1_2:+55497892 | None:intergenic |
ATCTTGTAGCTCTTCTTCAG+TGG | 0.512984 | 1_2:+55499311 | None:intergenic |
AGACACGTGATGATCAATCT+AGG | 0.540494 | 1_2:-55498179 | Msa0078150:CDS |
TGGGTTGGGAACTAGATATG+TGG | 0.544994 | 1_2:+55497873 | None:intergenic |
CATTTAGGACACTGATGCAG+AGG | 0.570696 | 1_2:-55499044 | Msa0078150:intron |
GAAGTTGATGCAGATGGCAA+TGG | 0.578787 | 1_2:-55499279 | Msa0078150:CDS |
TATAGTTGTATTGTACCTAG+TGG | 0.585647 | 1_2:-55497944 | Msa0078150:three_prime_UTR |
TTCACTAAGGACATGTGCCA+TGG | 0.599624 | 1_2:-55500316 | None:intergenic |
ATTAAAGAAGCAGATATGGA+TGG | 0.602493 | 1_2:-55498122 | Msa0078150:CDS |
GAAGCAGATATGGATGGTGA+TGG | 0.608277 | 1_2:-55498116 | Msa0078150:CDS |
TTAGGACACTGATGCAGAGG+AGG | 0.624491 | 1_2:-55499041 | Msa0078150:intron |
TGCAGAGGAGGAGCTTAGAG+AGG | 0.630033 | 1_2:-55499029 | Msa0078150:CDS |
ATAAGTGAAGTTGATGCAGA+TGG | 0.649786 | 1_2:-55499285 | Msa0078150:CDS |
TGGCTATATATCAGCCAGTG+AGG | 0.688712 | 1_2:-55498978 | Msa0078150:intron |
ATCCAATGACCTGATAACAG+TGG | 0.720716 | 1_2:+55499341 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAATAAATAATGAATAGAA+TGG | + | chr1_2:55498916-55498935 | None:intergenic | 10.0% |
!!! | AATTTTAGAAAATCTAATAT+GGG | + | chr1_2:55499279-55499298 | None:intergenic | 10.0% |
!!! | AAATTTTAGAAAATCTAATA+TGG | + | chr1_2:55499280-55499299 | None:intergenic | 10.0% |
!!! | TCTAAAATTTTATTTTTTGA+TGG | - | chr1_2:55499290-55499309 | Msa0078150:CDS | 10.0% |
!!! | AACTTATGACTTTTTTAATT+TGG | - | chr1_2:55497974-55497993 | Msa0078150:three_prime_UTR | 15.0% |
!! | ATAACTTATATAACATGTTA+TGG | + | chr1_2:55498120-55498139 | None:intergenic | 15.0% |
!!! | CTGTTATTTTATTTTCATTT+AGG | - | chr1_2:55499035-55499054 | Msa0078150:CDS | 15.0% |
!!! | AAAATTTTATTTTTTGATGG+TGG | - | chr1_2:55499293-55499312 | Msa0078150:CDS | 15.0% |
!! | TTATTAAGGTGAAAAAAAAA+TGG | + | chr1_2:55499399-55499418 | None:intergenic | 15.0% |
!! | AAAAAGAAAAACTATGTAAA+TGG | + | chr1_2:55499422-55499441 | None:intergenic | 15.0% |
!!! | TAGCATCATTTTTTTTTTTA+TGG | + | chr1_2:55500177-55500196 | None:intergenic | 15.0% |
!!! | CTTAAAAGAATAACAATTTT+GGG | + | chr1_2:55500243-55500262 | None:intergenic | 15.0% |
!! | GTAAACTATTTGATTGATAA+TGG | - | chr1_2:55498065-55498084 | Msa0078150:exon | 20.0% |
!! | CTTATATATGGTTATACTTA+CGG | - | chr1_2:55498278-55498297 | Msa0078150:intron | 20.0% |
!!! | AATTTTTTTATCTCCAATGA+GGG | + | chr1_2:55498388-55498407 | None:intergenic | 20.0% |
!!! | AAATTTTTTTATCTCCAATG+AGG | + | chr1_2:55498389-55498408 | None:intergenic | 20.0% |
!! | ATTGGAGATAAAAAAATTTG+AGG | - | chr1_2:55498390-55498409 | Msa0078150:intron | 20.0% |
!! | TAAATAATGAATAGAATGGA+AGG | + | chr1_2:55498912-55498931 | None:intergenic | 20.0% |
!!! | ACAATTTTATATACCTCAAT+GGG | + | chr1_2:55499203-55499222 | None:intergenic | 20.0% |
!!! | AACAATTTTATATACCTCAA+TGG | + | chr1_2:55499204-55499223 | None:intergenic | 20.0% |
!! | AACTATGTAAATGGTTATTA+AGG | + | chr1_2:55499413-55499432 | None:intergenic | 20.0% |
!!! | TTTTTTTTTTCTTCATCGAA+TGG | + | chr1_2:55500042-55500061 | None:intergenic | 20.0% |
!! | AAAAAAAATCTCATCTCAAT+TGG | - | chr1_2:55500055-55500074 | Msa0078150:intron | 20.0% |
!!! | ATAAAATACAACAACGATTT+TGG | + | chr1_2:55500133-55500152 | None:intergenic | 20.0% |
!!! | GCTTAAAAGAATAACAATTT+TGG | + | chr1_2:55500244-55500263 | None:intergenic | 20.0% |
! | AAAATGAAATCTACCTAGAT+TGG | + | chr1_2:55497927-55497946 | None:intergenic | 25.0% |
! | CAAATAGTTTACAAGCTTAT+AGG | + | chr1_2:55498057-55498076 | None:intergenic | 25.0% |
!! | GAGATTGAAGTTAAAGTATT+TGG | + | chr1_2:55498187-55498206 | None:intergenic | 25.0% |
! | TATCCAACATGACTTATATA+TGG | - | chr1_2:55498266-55498285 | Msa0078150:intron | 25.0% |
! | TAACCATATATAAGTCATGT+TGG | + | chr1_2:55498272-55498291 | None:intergenic | 25.0% |
!!! | GGTTCTAAACTTTTAAGATT+CGG | - | chr1_2:55498349-55498368 | Msa0078150:intron | 25.0% |
! | ATATTCCTACTTAAGATTGA+GGG | + | chr1_2:55498444-55498463 | None:intergenic | 25.0% |
! | AATATTCCTACTTAAGATTG+AGG | + | chr1_2:55498445-55498464 | None:intergenic | 25.0% |
!! | AGTTATTGATAGTTGATTAG+CGG | - | chr1_2:55498490-55498509 | Msa0078150:intron | 25.0% |
! | TTTAAGAAATTTGTGTGAGA+TGG | - | chr1_2:55498519-55498538 | Msa0078150:intron | 25.0% |
! | CTTTCAATATCAAAGTTCTA+AGG | - | chr1_2:55498950-55498969 | Msa0078150:intron | 25.0% |
!! | AACAATTTTATATACCTCAC+TGG | + | chr1_2:55499133-55499152 | None:intergenic | 25.0% |
!! | ATATTTTCATTTCCTCTGTT+TGG | - | chr1_2:55499558-55499577 | Msa0078150:intron | 25.0% |
!! | TATTTTCATTTCCTCTGTTT+GGG | - | chr1_2:55499559-55499578 | Msa0078150:intron | 25.0% |
! | TACAATACAAGATATATACG+TGG | + | chr1_2:55499818-55499837 | None:intergenic | 25.0% |
! | ATATCTTGTATTGTACATGA+AGG | - | chr1_2:55499823-55499842 | Msa0078150:intron | 25.0% |
!!! | TTTTTTTTTTATGGACCACT+AGG | + | chr1_2:55500168-55500187 | None:intergenic | 25.0% |
!!! | AAGAATAACAATTTTGGGTT+GGG | + | chr1_2:55500238-55500257 | None:intergenic | 25.0% |
!!! | AAAGAATAACAATTTTGGGT+TGG | + | chr1_2:55500239-55500258 | None:intergenic | 25.0% |
AATAGAGAAAGAGAATGAGA+GGG | - | chr1_2:55497843-55497862 | Msa0078150:three_prime_UTR | 30.0% | |
GTGTCAAGTATAGTTCAATT+AGG | - | chr1_2:55497874-55497893 | Msa0078150:three_prime_UTR | 30.0% | |
TCAAGTATAGTTCAATTAGG+TGG | - | chr1_2:55497877-55497896 | Msa0078150:three_prime_UTR | 30.0% | |
CTCATTGAAGTTCTACAAAT+AGG | + | chr1_2:55497903-55497922 | None:intergenic | 30.0% | |
CTATTTGTAGAACTTCAATG+AGG | - | chr1_2:55497901-55497920 | Msa0078150:three_prime_UTR | 30.0% | |
ATATCTATCTAGTCTAGTCT+AGG | - | chr1_2:55498003-55498022 | Msa0078150:three_prime_UTR | 30.0% | |
GAAAAATGTTATAAGTTCGC+GGG | + | chr1_2:55498098-55498117 | None:intergenic | 30.0% | |
GGAAAAATGTTATAAGTTCG+CGG | + | chr1_2:55498099-55498118 | None:intergenic | 30.0% | |
!! | GTTGATAGTGGATAATTCTA+CGG | + | chr1_2:55498222-55498241 | None:intergenic | 30.0% |
!! | GGTAATGAATAAGTTGATAG+TGG | + | chr1_2:55498234-55498253 | None:intergenic | 30.0% |
TGTTGGATAAGAAAAATTGC+AGG | + | chr1_2:55498255-55498274 | None:intergenic | 30.0% | |
! | TTCCTTTTCTTTCCACAATA+AGG | + | chr1_2:55498304-55498323 | None:intergenic | 30.0% |
! | GTTATTGATAGTTGATTAGC+GGG | - | chr1_2:55498491-55498510 | Msa0078150:intron | 30.0% |
CAAGAACTCATCAAATTCAA+TGG | + | chr1_2:55498843-55498862 | None:intergenic | 30.0% | |
!! | ATCAAAGTTCTAAGGTCTAT+AGG | - | chr1_2:55498958-55498977 | Msa0078150:intron | 30.0% |
CAATAACCAAAGACTAAGTT+TGG | - | chr1_2:55499010-55499029 | Msa0078150:CDS | 30.0% | |
GTCTTTGACAAAGATCAAAA+TGG | - | chr1_2:55499096-55499115 | Msa0078150:intron | 30.0% | |
GACAATGCATAATATATGCA+AGG | + | chr1_2:55499338-55499357 | None:intergenic | 30.0% | |
ACAAGATATATACGTGGAAA+AGG | + | chr1_2:55499812-55499831 | None:intergenic | 30.0% | |
TTGGATAGTGAAATATACGA+TGG | - | chr1_2:55499860-55499879 | Msa0078150:intron | 30.0% | |
TGAAAAACTAAGTGATGAAG+AGG | - | chr1_2:55499938-55499957 | Msa0078150:intron | 30.0% | |
GATGATTAAAGAAGCAGATA+TGG | - | chr1_2:55499968-55499987 | Msa0078150:intron | 30.0% | |
ATTAAAGAAGCAGATATGGA+TGG | - | chr1_2:55499972-55499991 | Msa0078150:intron | 30.0% | |
AAAAATCTCATCTCAATTGG+AGG | - | chr1_2:55500058-55500077 | Msa0078150:intron | 30.0% | |
TATTGGTCATTCAAATTCGT+TGG | - | chr1_2:55500082-55500101 | Msa0078150:intron | 30.0% | |
!! | ATACAACAACGATTTTGGAA+AGG | + | chr1_2:55500128-55500147 | None:intergenic | 30.0% |
TATAGTTGTATTGTACCTAG+TGG | - | chr1_2:55500150-55500169 | Msa0078150:intron | 30.0% | |
CTCAAAGACAAAACATACCA+TGG | + | chr1_2:55497798-55497817 | None:intergenic | 35.0% | |
! | TCTTTGAGAGAGAAATAGAG+AGG | - | chr1_2:55497810-55497829 | Msa0078150:three_prime_UTR | 35.0% |
GAATAGAGAAAGAGAATGAG+AGG | - | chr1_2:55497842-55497861 | Msa0078150:three_prime_UTR | 35.0% | |
!! | TTATACTTACGGCCTTATTG+TGG | - | chr1_2:55498289-55498308 | Msa0078150:intron | 35.0% |
ATAAGACCATCTTCAATGAG+AGG | - | chr1_2:55498328-55498347 | Msa0078150:intron | 35.0% | |
TTAGAACCTCTCATTGAAGA+TGG | + | chr1_2:55498337-55498356 | None:intergenic | 35.0% | |
TATCTATTACGTACCCTCAT+TGG | - | chr1_2:55498372-55498391 | Msa0078150:intron | 35.0% | |
TAAGACCCTCAATCTTAAGT+AGG | - | chr1_2:55498436-55498455 | Msa0078150:intron | 35.0% | |
AAGAAATTTGTGTGAGATGG+TGG | - | chr1_2:55498522-55498541 | Msa0078150:intron | 35.0% | |
AGAAATTTGTGTGAGATGGT+GGG | - | chr1_2:55498523-55498542 | Msa0078150:intron | 35.0% | |
!! | GAATGGATTGAGTGCTTATT+AGG | - | chr1_2:55498548-55498567 | Msa0078150:intron | 35.0% |
AAGAATTAGCCACTGTTATC+AGG | - | chr1_2:55498744-55498763 | Msa0078150:intron | 35.0% | |
!! | ATAAGTGAAGTTGATGCAGA+TGG | - | chr1_2:55498809-55498828 | Msa0078150:intron | 35.0% |
TGATGAGTTCTTGAACTTGA+TGG | - | chr1_2:55498850-55498869 | Msa0078150:intron | 35.0% | |
! | ACAGAACCAAACTTAGTCTT+TGG | + | chr1_2:55499019-55499038 | None:intergenic | 35.0% |
TTATTCATGAACACCCATTG+AGG | - | chr1_2:55499187-55499206 | Msa0078150:intron | 35.0% | |
!!! | TTATTTTTTGATGGTGGTCG+AGG | - | chr1_2:55499299-55499318 | Msa0078150:CDS | 35.0% |
CATAATATATGCAAGGTCTG+GGG | + | chr1_2:55499331-55499350 | None:intergenic | 35.0% | |
GCATAATATATGCAAGGTCT+GGG | + | chr1_2:55499332-55499351 | None:intergenic | 35.0% | |
TGCATAATATATGCAAGGTC+TGG | + | chr1_2:55499333-55499352 | None:intergenic | 35.0% | |
! | TGAGTTTAGTTCAGTTGGTA+AGG | + | chr1_2:55499360-55499379 | None:intergenic | 35.0% |
AATGATTACTTCCCAAACAG+AGG | + | chr1_2:55499573-55499592 | None:intergenic | 35.0% | |
TTATATCCACATGCACATCT+AGG | - | chr1_2:55499665-55499684 | Msa0078150:intron | 35.0% | |
! | GAAGGCATAAACATGCATAT+TGG | - | chr1_2:55499841-55499860 | Msa0078150:intron | 35.0% |
TCATCTCAATTGGAGGATAT+TGG | - | chr1_2:55500065-55500084 | Msa0078150:intron | 35.0% | |
!! | ACGATTTTGGAAAGGTAATG+AGG | + | chr1_2:55500120-55500139 | None:intergenic | 35.0% |
GTGGTTAACTAACTAATGCT+TGG | + | chr1_2:55500205-55500224 | None:intergenic | 35.0% | |
AACTTCAATGAGGCCAATCT+AGG | - | chr1_2:55497911-55497930 | Msa0078150:three_prime_UTR | 40.0% | |
GCTATAATCACGTGAGTAGA+AGG | + | chr1_2:55498035-55498054 | None:intergenic | 40.0% | |
!! | GGCCTTATTGTGGAAAGAAA+AGG | - | chr1_2:55498299-55498318 | Msa0078150:intron | 40.0% |
GAGGGTCTTAATTGAGATCT+GGG | + | chr1_2:55498426-55498445 | None:intergenic | 40.0% | |
TGAGGGTCTTAATTGAGATC+TGG | + | chr1_2:55498427-55498446 | None:intergenic | 40.0% | |
ATCCAATGACCTGATAACAG+TGG | + | chr1_2:55498756-55498775 | None:intergenic | 40.0% | |
TCTTGTAGCTCTTCTTCAGT+GGG | + | chr1_2:55498785-55498804 | None:intergenic | 40.0% | |
ATCTTGTAGCTCTTCTTCAG+TGG | + | chr1_2:55498786-55498805 | None:intergenic | 40.0% | |
! | AGTTCTTGAACTTGATGGCT+AGG | - | chr1_2:55498855-55498874 | Msa0078150:intron | 40.0% |
! | CCTTGTGAGTTTAGTTCAGT+TGG | + | chr1_2:55499365-55499384 | None:intergenic | 40.0% |
CCAACTGAACTAAACTCACA+AGG | - | chr1_2:55499362-55499381 | Msa0078150:CDS | 40.0% | |
CAGCTAATATTCACTGCATG+TGG | + | chr1_2:55499709-55499728 | None:intergenic | 40.0% | |
AGACACGTGATGATCAATCT+AGG | - | chr1_2:55499915-55499934 | Msa0078150:intron | 40.0% | |
GCAAACAGGTTGCATTACTG+TGG | - | chr1_2:55498721-55498740 | Msa0078150:intron | 45.0% | |
AGCCACTGTTATCAGGTCAT+TGG | - | chr1_2:55498751-55498770 | Msa0078150:intron | 45.0% | |
!! | GAAGTTGATGCAGATGGCAA+TGG | - | chr1_2:55498815-55498834 | Msa0078150:intron | 45.0% |
! | CATTTAGGACACTGATGCAG+AGG | - | chr1_2:55499050-55499069 | Msa0078150:intron | 45.0% |
TGGCTATATATCAGCCAGTG+AGG | - | chr1_2:55499116-55499135 | Msa0078150:intron | 45.0% | |
TACTGTCCTAGATGTGCATG+TGG | + | chr1_2:55499674-55499693 | None:intergenic | 45.0% | |
TCACTGCATGTGGAAACGTA+CGG | + | chr1_2:55499699-55499718 | None:intergenic | 45.0% | |
GAAGCAGATATGGATGGTGA+TGG | - | chr1_2:55499978-55499997 | Msa0078150:intron | 45.0% | |
! | TGGGTTGGGAACTAGATATG+TGG | + | chr1_2:55500224-55500243 | None:intergenic | 45.0% |
!! | TTAAAATTTGTATTTAAAAA+TGG | + | chr1_2:55499461-55499480 | None:intergenic | 5.0% |
!! | GTGTGAGATGGTGGGTTGAA+TGG | - | chr1_2:55498531-55498550 | Msa0078150:intron | 50.0% |
TTAGGACACTGATGCAGAGG+AGG | - | chr1_2:55499053-55499072 | Msa0078150:intron | 50.0% | |
GGAGCTTAGAGAGGCTTTCA+AGG | - | chr1_2:55499074-55499093 | Msa0078150:intron | 50.0% | |
TGCAGAGGAGGAGCTTAGAG+AGG | - | chr1_2:55499065-55499084 | Msa0078150:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 55497790 | 55500326 | 55497790 | ID=Msa0078150;Name=Msa0078150 |
chr1_2 | mRNA | 55497790 | 55500326 | 55497790 | ID=Msa0078150-mRNA-1;Parent=Msa0078150;Name=Msa0078150-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.66|0.5|0.75|1|1|4|277|128 |
chr1_2 | exon | 55497790 | 55498204 | 55497790 | ID=Msa0078150-mRNA-1:exon:17319;Parent=Msa0078150-mRNA-1 |
chr1_2 | exon | 55498979 | 55499059 | 55498979 | ID=Msa0078150-mRNA-1:exon:17318;Parent=Msa0078150-mRNA-1 |
chr1_2 | exon | 55499230 | 55499387 | 55499230 | ID=Msa0078150-mRNA-1:exon:17317;Parent=Msa0078150-mRNA-1 |
chr1_2 | exon | 55500317 | 55500326 | 55500317 | ID=Msa0078150-mRNA-1:exon:17316;Parent=Msa0078150-mRNA-1 |
chr1_2 | CDS | 55500317 | 55500326 | 55500317 | ID=Msa0078150-mRNA-1:cds;Parent=Msa0078150-mRNA-1 |
chr1_2 | CDS | 55499230 | 55499387 | 55499230 | ID=Msa0078150-mRNA-1:cds;Parent=Msa0078150-mRNA-1 |
chr1_2 | CDS | 55498979 | 55499059 | 55498979 | ID=Msa0078150-mRNA-1:cds;Parent=Msa0078150-mRNA-1 |
chr1_2 | CDS | 55498067 | 55498204 | 55498067 | ID=Msa0078150-mRNA-1:cds;Parent=Msa0078150-mRNA-1 |
chr1_2 | three_prime_UTR | 55497790 | 55498066 | 55497790 | ID=Msa0078150-mRNA-1:three_prime_utr;Parent=Msa0078150-mRNA-1 |
Gene Sequence |
Protein sequence |