AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1155470


Find 289 sgRNAs with CRISPR-Local

Find 1073 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr7_4 gene 43406959 43424350 43406959 ID=Msa1155470;Name=Msa1155470
chr7_4 mRNA 43406959 43424350 43406959 ID=Msa1155470-mRNA-1;Parent=Msa1155470;Name=Msa1155470-mRNA-1;_AED=0.15;_eAED=0.15;_QI=529|0.77|0.89|0.94|0.94|0.94|19|366|1153
chr7_4 exon 43406959 43407453 43406959 ID=Msa1155470-mRNA-1:exon:10949;Parent=Msa1155470-mRNA-1
chr7_4 exon 43408417 43408473 43408417 ID=Msa1155470-mRNA-1:exon:10948;Parent=Msa1155470-mRNA-1
chr7_4 exon 43408644 43408820 43408644 ID=Msa1155470-mRNA-1:exon:10947;Parent=Msa1155470-mRNA-1
chr7_4 exon 43408893 43408959 43408893 ID=Msa1155470-mRNA-1:exon:10946;Parent=Msa1155470-mRNA-1
chr7_4 exon 43410632 43410810 43410632 ID=Msa1155470-mRNA-1:exon:10945;Parent=Msa1155470-mRNA-1
chr7_4 exon 43412619 43412828 43412619 ID=Msa1155470-mRNA-1:exon:10944;Parent=Msa1155470-mRNA-1
chr7_4 exon 43414005 43414133 43414005 ID=Msa1155470-mRNA-1:exon:10943;Parent=Msa1155470-mRNA-1
chr7_4 exon 43414830 43414934 43414830 ID=Msa1155470-mRNA-1:exon:10942;Parent=Msa1155470-mRNA-1
chr7_4 exon 43416093 43416182 43416093 ID=Msa1155470-mRNA-1:exon:10941;Parent=Msa1155470-mRNA-1
chr7_4 exon 43416380 43416445 43416380 ID=Msa1155470-mRNA-1:exon:10940;Parent=Msa1155470-mRNA-1
chr7_4 exon 43417129 43417434 43417129 ID=Msa1155470-mRNA-1:exon:10939;Parent=Msa1155470-mRNA-1
chr7_4 exon 43417634 43417702 43417634 ID=Msa1155470-mRNA-1:exon:10938;Parent=Msa1155470-mRNA-1
chr7_4 exon 43419975 43420094 43419975 ID=Msa1155470-mRNA-1:exon:10937;Parent=Msa1155470-mRNA-1
chr7_4 exon 43420204 43420263 43420204 ID=Msa1155470-mRNA-1:exon:10936;Parent=Msa1155470-mRNA-1
chr7_4 exon 43420366 43420502 43420366 ID=Msa1155470-mRNA-1:exon:10935;Parent=Msa1155470-mRNA-1
chr7_4 exon 43421489 43421579 43421489 ID=Msa1155470-mRNA-1:exon:10934;Parent=Msa1155470-mRNA-1
chr7_4 exon 43421665 43421836 43421665 ID=Msa1155470-mRNA-1:exon:10933;Parent=Msa1155470-mRNA-1
chr7_4 exon 43422119 43423763 43422119 ID=Msa1155470-mRNA-1:exon:10932;Parent=Msa1155470-mRNA-1
chr7_4 exon 43424169 43424350 43424169 ID=Msa1155470-mRNA-1:exon:10931;Parent=Msa1155470-mRNA-1
chr7_4 five_prime_UTR 43424169 43424350 43424169 ID=Msa1155470-mRNA-1:five_prime_utr;Parent=Msa1155470-mRNA-1
chr7_4 five_prime_UTR 43423417 43423763 43423417 ID=Msa1155470-mRNA-1:five_prime_utr;Parent=Msa1155470-mRNA-1
chr7_4 CDS 43422119 43423416 43422119 ID=Msa1155470-mRNA-1:cds;Parent=Msa1155470-mRNA-1
chr7_4 CDS 43421665 43421836 43421665 ID=Msa1155470-mRNA-1:cds;Parent=Msa1155470-mRNA-1
chr7_4 CDS 43421489 43421579 43421489 ID=Msa1155470-mRNA-1:cds;Parent=Msa1155470-mRNA-1
chr7_4 CDS 43420366 43420502 43420366 ID=Msa1155470-mRNA-1:cds;Parent=Msa1155470-mRNA-1
chr7_4 CDS 43420204 43420263 43420204 ID=Msa1155470-mRNA-1:cds;Parent=Msa1155470-mRNA-1
chr7_4 CDS 43419975 43420094 43419975 ID=Msa1155470-mRNA-1:cds;Parent=Msa1155470-mRNA-1
chr7_4 CDS 43417634 43417702 43417634 ID=Msa1155470-mRNA-1:cds;Parent=Msa1155470-mRNA-1
chr7_4 CDS 43417129 43417434 43417129 ID=Msa1155470-mRNA-1:cds;Parent=Msa1155470-mRNA-1
chr7_4 CDS 43416380 43416445 43416380 ID=Msa1155470-mRNA-1:cds;Parent=Msa1155470-mRNA-1
chr7_4 CDS 43416093 43416182 43416093 ID=Msa1155470-mRNA-1:cds;Parent=Msa1155470-mRNA-1
chr7_4 CDS 43414830 43414934 43414830 ID=Msa1155470-mRNA-1:cds;Parent=Msa1155470-mRNA-1
chr7_4 CDS 43414005 43414133 43414005 ID=Msa1155470-mRNA-1:cds;Parent=Msa1155470-mRNA-1
chr7_4 CDS 43412619 43412828 43412619 ID=Msa1155470-mRNA-1:cds;Parent=Msa1155470-mRNA-1
chr7_4 CDS 43410632 43410810 43410632 ID=Msa1155470-mRNA-1:cds;Parent=Msa1155470-mRNA-1
chr7_4 CDS 43408893 43408959 43408893 ID=Msa1155470-mRNA-1:cds;Parent=Msa1155470-mRNA-1
chr7_4 CDS 43408644 43408820 43408644 ID=Msa1155470-mRNA-1:cds;Parent=Msa1155470-mRNA-1
chr7_4 CDS 43408417 43408473 43408417 ID=Msa1155470-mRNA-1:cds;Parent=Msa1155470-mRNA-1
chr7_4 CDS 43407325 43407453 43407325 ID=Msa1155470-mRNA-1:cds;Parent=Msa1155470-mRNA-1
chr7_4 three_prime_UTR 43406959 43407324 43406959 ID=Msa1155470-mRNA-1:three_prime_utr;Parent=Msa1155470-mRNA-1
Gene Sequence

>Msa1155470

ATGGGATCTAGAAAGATTTGGTTGAAGTGTCAGGGTAATGATTCTTTAGCTTATGTTAATGGAAATGGCCGCAATGTTGATTATGTGGAAGGTTCGGGTGAGGATGTAGGGGTGGTACCTGTAGCTGGTGTTGAATTGGATGTTTTAGGGGAAGAAGAAGAAGGAGAGAAGGTTGAGAAGGAAATAGGAGTAGTGGAAAAAAATGTTGATGAATTGAAAGAACTATTGCAAAAGGCCTCGAAAGAGCTTGAGGTAGCGCAAATAAATAGTACTATGTTTGAAGAAAAGGTTAAAAAAATATCAGAGACTGCCATTTTTTTGCATGATGAAGCAACCCGATCTTTGAATGATGTTAATTCTACCCTTGACAGCATTCAAAAAGTTGCAAATGAAGAACATATAGCCAAAGATGCTGTTCAAAATGCTACAATGGCTCTTTCATTGGCCGAGGCAAAACTTCAGGTAGCTATAGAGTCTTTAGAGGCCACAAAAGAAGTGCATGAAAGTTCTAATGAGAGTGATGGCGATAAGGACTTGACAGAAAAGGAGAGCACACTTTTCGTTGCGCAAGAAGATATAAAGAAATGCCAGGATAATTTGACAAATTGTGAGGTAGAGTTGAGGCGCTTGCAAAATAAAAAGGAGGAGTTGCAAAAGGAAGTTAGCAAATTGCAAGAAATTGCTGAAAAGGCACAACTGGATGCAGTGAAAGCTGAGGAGGATGTTACAAACATAATGCTTTTAGCGGAGCAAGCTGTTGCGTTTGAACTTGAGGCTACACAACGTGTGAACGATGCTGAGATTGCTTTACAGCGAGCTGATAAGTCTTTTCAAAATTTGAATGCTGACGCTGTAGAAACTATACAAGTAGAAGATGTCGTTCTTGTTTCCGAGGAGAACATGGTTGAAAGTTTTTCTGATGATGTCACAGTTGGTAGTGACAAGGATTTGGCCACAAGTGATGATGCATCTTTGCCTGCCAAGTTACCACCTGAAACACAATCTGAAAAAACCGGCCAAATTTTGGAAGAACCAACACAGTTGGATTATATAAGTGATAATGAGAATGGCGTCCAAACAAAAAAGCAGGAAACACAAAAAGATTTCACTAAAGATAGCTCACCATTAGCTCCCAAAGCATTATTGAAGAAGTCATCTCGATTCTTTCCTGCATCATTCTTTTCTTTTCCTGAAGAGGAGGCTGAGTCCACACCAACATCGGTTTTCCAGGGCCTCATACTATCTGCAAAAAAGCAGTTTCCCAAGCTAGTTCTTGGATTATTGTTAATGGGAGCAGGAGCCGCTGTCTATGCCAATAGAGCAGAGAAAAATGCTCAGCTTCTTCAACCGGCAGATGTCATTATGACCAGTGCTGAAGAACTTTCTTCTAATGCAAAGCCTCTCTTTAGAAAACTCCAGAAAATCCCCAAGAAAATTAAGAAGATTATTGCGTCGTTACCTCATCAAGAGGTGAATGAGGAAGAAGCCTCCCTCTTTGACATGCTCTGGTTATTACTTGCAAGTGTTATATTTGTGCCAATATTTCAAAAAATCCCTGGAGGTAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTCTCTCCATCATTCGTAATGTTCATGCGACAAAAGCAATAGCTGAATTTGGAGTTGTTTTCCTTTTATTTAATATTGGCCTGGAGCTCTCTGTTGAAAGGCTTAGTTCTATGAAGAAATATGTTTTCGGATTAGGTTCTGTGCAGGTTTTGGCAACTGCTGGAGTTATTGGTTTGGTGGCTCATTATATCTGTGGCCTACCTGGCCCTGCTGCTATAGTTATCGGGAATGGTCTGGCTTTATCATCCACCGCCGTTGTTCTGCAGGTGTTGCAGGAAAGAGGCGAGAGCACATCACGGCATGGGCGAGCTACATTTTCTGTTTTACTTTTTCAGGAGAGGTTATTTGAGATCATATCATCAAAATCATTGCACAGATCTGCCATACCGTTTCCGATCTTCCCATCAAGCTTTTCACGTTCTAGTTTATTAACAGGGTACAATAGTGGCGCTATTGCGGCATCACGCTCCGTTGCCACAGGTGGCCGCTATCTAGGGTTCTTCGCACCACATTTTGGTGTTGCGATGAAAATCACAACTTTTTGCGTGCTTTTGGAGAGAAAAGTGGTAGTGGTCGCTGCGAGATCCTTTTGCAGTAGCTACAATGGGGGTTTGGATCCTGTGGGTAAAGGTGAAACAGAAGATTTGGCTGTCGTAGTCTTACTAATACTCATACCTCTTATTTCACCTAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCCATTGCTGAAGCTCTTGGACTGGCTGCTGTTAAGGCAGCAGTTGCCATTACTGCCATAATTGCAGGTGGACGATTGCTCCTTCGGCCAATATACAAGCAAGTCGCAGAAAATCAAAATGCTGAAATATTCTCAGCCAATACACTTCTTGTTATTCTTGGGACCAGTCTTTTGACCGCCAGGGCAGGACTTTCCATGGCATTGGGGGCATTTTTGGCTGGTTTACTACTGGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTTTTGGGGCTCTTCTTTATGACGGTTGGAATGTCAATCGATCCAAAACTTTTTGTTTCAAACTTCCCAGTCGTCACGGGGACATTGGCACTCTTAATATGTGGCAAGACTCTCTTAGTTTCTTTGATGGGTAGAATCTTTGGGATTTCCGTCATTTCTGCTTTAAGAGCTGGACTTCTTCTTGCTCCTGGTGGAGAATTTGCATTTGTGGCTTTTGGGGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGCTATCTTCTTTGTTGTTTCTTGTTGTGGGCATTTCAATGGCCATCACTCCATGGCTAGCTGCAGGAGGTCAGCTGATTGCTTCCCGTTTCGAGCAGAATGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGGTAAAATCTCTTAAATTGGTTGCAGCCCATGAAAGAGTGGCAGTTGGGCGAGCACTCGATCTCCCTGTGTACTTTGGAGATGCTGGCAGTCGAGAGGTCCTTCATAAGATCGGGGCCGAAAGGGCATGTGCTGCAGCTATTACTCTAGATACGCCTGGAGCAAATTATAGAACTGTTTGGGCTCTGAGTAAGTACTTCCCAAATGTGAAGACTTTTGTTCGCGCCCATGACGTTGATCATGGAGTGAATTTAGAAAAGGCCGGAGCTACTGCGGTGGTCCCAGAGACCTTGGAGCCAAGTCTTCAATTAGCAGCTGCTGTGCTTGCTCAGCTGTGTGAAGCAAGTGGAAGTTCTCTTGGTTATGGATTTACAAGAATTATGAGCAAAACCAAATCTCAATCTCCAGATGCATTAGATTTAGATGATGCCCAAGTCTCTGAAGGGACACTGGCAGTATGA

Protein sequence

>Msa1155470

MGSRKIWLKCQGNDSLAYVNGNGRNVDYVEGSGEDVGVVPVAGVELDVLGEEEEGEKVEKEIGVVEKNVDELKELLQKASKELEVAQINSTMFEEKVKKISETAIFLHDEATRSLNDVNSTLDSIQKVANEEHIAKDAVQNATMALSLAEAKLQVAIESLEATKEVHESSNESDGDKDLTEKESTLFVAQEDIKKCQDNLTNCEVELRRLQNKKEELQKEVSKLQEIAEKAQLDAVKAEEDVTNIMLLAEQAVAFELEATQRVNDAEIALQRADKSFQNLNADAVETIQVEDVVLVSEENMVESFSDDVTVGSDKDLATSDDASLPAKLPPETQSEKTGQILEEPTQLDYISDNENGVQTKKQETQKDFTKDSSPLAPKALLKKSSRFFPASFFSFPEEEAESTPTSVFQGLILSAKKQFPKLVLGLLLMGAGAAVYANRAEKNAQLLQPADVIMTSAEELSSNAKPLFRKLQKIPKKIKKIIASLPHQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRNVHATKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSVQVLATAGVIGLVAHYICGLPGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQERLFEIISSKSLHRSAIPFPIFPSSFSRSSLLTGYNSGAIAASRSVATGGRYLGFFAPHFGVAMKITTFCVLLERKVVVVAARSFCSSYNGGLDPVGKGETEDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLFVSNFPVVTGTLALLICGKTLLVSLMGRIFGISVISALRAGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMAITPWLAAGGQLIASRFEQNDVRSLLPVESEVKSLKLVAAHERVAVGRALDLPVYFGDAGSREVLHKIGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGVNLEKAGATAVVPETLEPSLQLAAAVLAQLCEASGSSLGYGFTRIMSKTKSQSPDALDLDDAQVSEGTLAV*