Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089950 | XP_003592804.1 | 97.862 | 608 | 12 | 1 | 1 | 608 | 1 | 607 | 0.0 | 1238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089950 | sp|Q9FY49|LKHA4_ARATH | 69.692 | 617 | 177 | 3 | 1 | 608 | 1 | 616 | 0.0 | 902 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089950 | G7IAW9 | 97.862 | 608 | 12 | 1 | 1 | 608 | 1 | 607 | 0.0 | 1238 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000560 | Msa0089950 | 0.808092 | 3.671167e-50 | -8.615850e-47 |
| Msa0025160 | Msa0089950 | 0.808240 | 3.413480e-50 | -8.615850e-47 |
| Msa0072520 | Msa0089950 | 0.801266 | 9.766889e-49 | -8.615850e-47 |
| Msa0086250 | Msa0089950 | 0.800914 | 1.152540e-48 | -8.615850e-47 |
| Msa0089950 | Msa0126210 | 0.807540 | 4.807758e-50 | -8.615850e-47 |
| Msa0089950 | Msa0307280 | 0.802335 | 5.892287e-49 | -8.615850e-47 |
| Msa0089950 | Msa0324830 | 0.805307 | 1.421903e-49 | -8.615850e-47 |
| Msa0089950 | Msa0687090 | 0.825834 | 3.776438e-54 | -8.615850e-47 |
| Msa0089950 | Msa0706150 | 0.806295 | 8.817631e-50 | -8.615850e-47 |
| Msa0089950 | Msa1029530 | 0.801999 | 6.908987e-49 | -8.615850e-47 |
| Msa0089950 | Msa1039220 | 0.819811 | 9.547527e-53 | -8.615850e-47 |
| Msa0089950 | Msa1130280 | 0.804627 | 1.972985e-49 | -8.615850e-47 |
| Msa0089950 | Msa1236150 | 0.914092 | 2.872903e-84 | -8.615850e-47 |
| Msa0089950 | Msa1240770 | 0.803416 | 3.522090e-49 | -8.615850e-47 |
| Msa0089950 | Msa1315160 | 0.813017 | 3.166183e-51 | -8.615850e-47 |
| Msa0089950 | Msa1393850 | 0.833910 | 4.064112e-56 | -8.615850e-47 |
| Msa0089950 | Msa1411790 | 0.803445 | 3.473741e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089950 | MtrunA17_Chr1g0213331 | 97.862 | 608 | 12 | 1 | 1 | 608 | 1 | 607 | 0.0 | 1238 |
| Msa0089950 | MtrunA17_Chr3g0135971 | 27.298 | 359 | 210 | 14 | 120 | 455 | 128 | 458 | 4.61e-20 | 94.7 |
| Msa0089950 | MtrunA17_Chr8g0343081 | 26.271 | 354 | 218 | 13 | 121 | 455 | 131 | 460 | 3.09e-18 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089950 | AT5G13520.1 | 69.692 | 617 | 177 | 3 | 1 | 608 | 1 | 616 | 0.0 | 902 |
| Msa0089950 | AT4G33090.1 | 25.138 | 362 | 216 | 12 | 119 | 455 | 127 | 458 | 6.49e-20 | 94.7 |
Find 207 sgRNAs with CRISPR-Local
Find 378 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCAGGGATGTTTGCTTTA+AGG | 0.143966 | 1_2:-71709734 | None:intergenic |
| CACCTTAACCTCATAATCTT+TGG | 0.221536 | 1_2:-71711527 | None:intergenic |
| ATCACAGCCGTCAATTCTTT+TGG | 0.251292 | 1_2:-71707824 | None:intergenic |
| CTGGCAAATGAGTCGGTAAA+TGG | 0.267595 | 1_2:+71709855 | Msa0089950:CDS |
| AAGGACCAGAGTGAGGGTTT+TGG | 0.268631 | 1_2:-71707478 | None:intergenic |
| TATAGAAGCATCAGAATAAA+AGG | 0.269487 | 1_2:-71711892 | None:intergenic |
| GATGATGATGATGAGTGTTT+TGG | 0.272847 | 1_2:+71707881 | Msa0089950:CDS |
| AGCCATTAGGGTTTGTTATT+CGG | 0.287767 | 1_2:+71707787 | Msa0089950:CDS |
| TTGACCCCGACGGTTATTAA+AGG | 0.309873 | 1_2:+71708202 | Msa0089950:CDS |
| ATGGGACTGAGGATATGATT+AGG | 0.334329 | 1_2:+71708074 | Msa0089950:CDS |
| GCAAATAGGTAAGGTGGAAT+TGG | 0.334855 | 1_2:-71707950 | None:intergenic |
| AATTGCTTATACTTTGTATT+CGG | 0.335503 | 1_2:+71712028 | Msa0089950:three_prime_UTR |
| GGGAGGTGGGGCCCAGGACT+AGG | 0.338745 | 1_2:+71707999 | Msa0089950:CDS |
| AAAAGAGCCATGTTGAATAT+TGG | 0.341081 | 1_2:+71709212 | Msa0089950:CDS |
| ATGGTTGGAGAGAGGGAAAA+AGG | 0.341656 | 1_2:-71707566 | None:intergenic |
| AGGGAAGGGGAAAGATTGTT+TGG | 0.345742 | 1_2:+71708094 | Msa0089950:CDS |
| CTCTTCCACCACTCTACCTT+TGG | 0.353869 | 1_2:-71707912 | None:intergenic |
| CAGTTGGTGAGCTTGATAAC+AGG | 0.359790 | 1_2:+71707978 | Msa0089950:CDS |
| TGAGAAGCTTCAATAGATTT+CGG | 0.360972 | 1_2:-71709948 | None:intergenic |
| TCAGGACACACCAGCCATTA+GGG | 0.369317 | 1_2:+71707775 | Msa0089950:CDS |
| CATCAGGGTCAATTCCTTCC+TGG | 0.372777 | 1_2:-71709310 | None:intergenic |
| TGGGACTGAGGATATGATTA+GGG | 0.374830 | 1_2:+71708075 | Msa0089950:CDS |
| GTCAGGACACACCAGCCATT+AGG | 0.375461 | 1_2:+71707774 | Msa0089950:CDS |
| TCAACAACACCTTGAGCAAT+AGG | 0.378580 | 1_2:-71711739 | None:intergenic |
| GAGAAAACGTTAAAAGAAGT+TGG | 0.385521 | 1_2:+71711604 | Msa0089950:CDS |
| TGACATCCCAACCGATTCAT+TGG | 0.396769 | 1_2:+71711954 | Msa0089950:three_prime_UTR |
| TGACCCCGACGGTTATTAAA+GGG | 0.399260 | 1_2:+71708203 | Msa0089950:CDS |
| ACCTGAGAATACACATCATC+AGG | 0.399303 | 1_2:-71709326 | None:intergenic |
| AGAGAGGTTCAAGGACAATA+TGG | 0.400955 | 1_2:+71709265 | Msa0089950:CDS |
| GTGAGTTTAGAACCCTTGAT+TGG | 0.402646 | 1_2:-71707593 | None:intergenic |
| ATCCAAAGATTATGAGGTTA+AGG | 0.404774 | 1_2:+71711525 | Msa0089950:CDS |
| ATCAATCGATTTGAACTTGA+AGG | 0.410059 | 1_2:-71709691 | None:intergenic |
| GGTGCCATTGTTGTTGTTGT+TGG | 0.416415 | 1_2:-71707341 | None:intergenic |
| CCCTTGATTGGGTCGATGGT+TGG | 0.416580 | 1_2:-71707581 | None:intergenic |
| CACCAACTGCAAATGCAAAT+AGG | 0.418291 | 1_2:-71707964 | None:intergenic |
| AACTGGAAACCTTTCTCATA+TGG | 0.422788 | 1_2:-71709350 | None:intergenic |
| AGCAGAGGAAGAAGGGGAGG+TGG | 0.429072 | 1_2:-71707657 | None:intergenic |
| CTCATGAACTTGCTCATAGC+TGG | 0.429580 | 1_2:+71708251 | Msa0089950:CDS |
| GTTCAATGCGCAACAAGAAC+TGG | 0.434717 | 1_2:-71709367 | None:intergenic |
| GAAATCTATTGAAGCTTCTC+AGG | 0.435996 | 1_2:+71709950 | Msa0089950:CDS |
| TGCAACCGGTGCACAGGTTG+TGG | 0.437418 | 1_2:+71708228 | Msa0089950:CDS |
| AGGGAAATGTGAGTGGTTGG+TGG | 0.443335 | 1_2:-71707398 | None:intergenic |
| TCAATCTTATTCTCTATGCC+AGG | 0.444219 | 1_2:-71709750 | None:intergenic |
| TCAGCTGCTAAAGAGTTTGA+TGG | 0.444601 | 1_2:+71708055 | Msa0089950:CDS |
| CATCCCCTTTAATAACCGTC+GGG | 0.448553 | 1_2:-71708207 | None:intergenic |
| TGACATTGAGTATAGACAAA+AGG | 0.450662 | 1_2:-71707722 | None:intergenic |
| TGGTTGGAGGGGTTTAAATG+AGG | 0.452149 | 1_2:+71709238 | Msa0089950:CDS |
| TATTGTGCAGGTCTTAGCCT+TGG | 0.452157 | 1_2:+71711480 | Msa0089950:intron |
| GCCATGTTGAATATTGGAAT+TGG | 0.454549 | 1_2:+71709218 | Msa0089950:CDS |
| GTGGGAGAGATTTGATTTGT+TGG | 0.456341 | 1_2:+71708126 | Msa0089950:CDS |
| TCAGGAGTGGGAGCTCTACT+TGG | 0.456702 | 1_2:+71709917 | Msa0089950:CDS |
| TGGTTTATTATTATAGATTG+AGG | 0.458039 | 1_2:+71711974 | Msa0089950:three_prime_UTR |
| TAAGGTGTCATTTCTCCAAC+GGG | 0.459712 | 1_2:+71711543 | Msa0089950:CDS |
| GTCTTATATACACTGGAGTC+GGG | 0.472504 | 1_2:-71709822 | None:intergenic |
| AGAACCCTTGATTGGGTCGA+TGG | 0.473280 | 1_2:-71707585 | None:intergenic |
| TCTCAGGTTCCATATGAGAA+AGG | 0.477154 | 1_2:+71709341 | Msa0089950:CDS |
| CAGTGATGGAGTGGATTTCA+AGG | 0.477695 | 1_2:-71707520 | None:intergenic |
| TCCAACCATCGACCCAATCA+AGG | 0.478388 | 1_2:+71707580 | Msa0089950:CDS |
| CACTGAAGAGCAGAGGAAGA+AGG | 0.478501 | 1_2:-71707665 | None:intergenic |
| TTGTTGGAGAGTGGAGAAGA+TGG | 0.479273 | 1_2:-71707325 | None:intergenic |
| TTCAGAAACTCATCAAATGC+AGG | 0.480159 | 1_2:-71709654 | None:intergenic |
| CCCTGATGATGTGTATTCTC+AGG | 0.481874 | 1_2:+71709325 | Msa0089950:CDS |
| TGAGTTTAGAACCCTTGATT+GGG | 0.483336 | 1_2:-71707592 | None:intergenic |
| AATATTGGAATTGGTTGGAG+GGG | 0.484685 | 1_2:+71709227 | Msa0089950:CDS |
| ACTGAAGAGCAGAGGAAGAA+GGG | 0.485848 | 1_2:-71707664 | None:intergenic |
| ATCTGAATCCAAAGATTATG+AGG | 0.485915 | 1_2:+71711519 | Msa0089950:CDS |
| GGTTTATTATTATAGATTGA+GGG | 0.486536 | 1_2:+71711975 | Msa0089950:three_prime_UTR |
| ATAACAGGGAGGTGGGGCCC+AGG | 0.486872 | 1_2:+71707993 | Msa0089950:CDS |
| GGCCGAATAACAAACCCTAA+TGG | 0.487856 | 1_2:-71707789 | None:intergenic |
| TAATAAACCAATGAATCGGT+TGG | 0.489670 | 1_2:-71711961 | None:intergenic |
| GTTATTAAAGGGGATGCAAC+CGG | 0.495380 | 1_2:+71708214 | Msa0089950:CDS |
| TGGGTCGATGGTTGGAGAGA+GGG | 0.496813 | 1_2:-71707573 | None:intergenic |
| AATAAACCAATGAATCGGTT+GGG | 0.498589 | 1_2:-71711960 | None:intergenic |
| GGATTGAGAAGGGTCAGTGA+TGG | 0.500891 | 1_2:-71707534 | None:intergenic |
| TCAGCAATTTCATCCTCCCT+TGG | 0.501574 | 1_2:-71709885 | None:intergenic |
| TGAGGATATGATTAGGGAAG+GGG | 0.503195 | 1_2:+71708081 | Msa0089950:CDS |
| AATTGCTGAGTGGCAAGGTC+AGG | 0.503227 | 1_2:+71709899 | Msa0089950:CDS |
| AGGGGATGCAACCGGTGCAC+AGG | 0.505859 | 1_2:+71708222 | Msa0089950:CDS |
| GCATCCCCTTTAATAACCGT+CGG | 0.506180 | 1_2:-71708208 | None:intergenic |
| GACATTGAGTATAGACAAAA+GGG | 0.506303 | 1_2:-71707721 | None:intergenic |
| TTAGGGTTTGTTATTCGGCC+CGG | 0.506368 | 1_2:+71707792 | Msa0089950:CDS |
| GAATGTTCCAAAAGAATTGA+CGG | 0.506622 | 1_2:+71707817 | Msa0089950:CDS |
| GGAGGTGGGGCCCAGGACTA+GGG | 0.506704 | 1_2:+71708000 | Msa0089950:CDS |
| TTCAGCATAAACCCTAGTCC+TGG | 0.507344 | 1_2:-71708011 | None:intergenic |
| AGGTGTGGTTAGAAAGAGTG+AGG | 0.507367 | 1_2:-71707616 | None:intergenic |
| TACCTATTTGCATTTGCAGT+TGG | 0.507637 | 1_2:+71707962 | Msa0089950:CDS |
| TGTCTTATATACACTGGAGT+CGG | 0.511411 | 1_2:-71709823 | None:intergenic |
| GAGCTTGATAACAGGGAGGT+GGG | 0.512339 | 1_2:+71707986 | Msa0089950:CDS |
| GTGTATGAGTGAGGATCAAC+GGG | 0.513328 | 1_2:-71707362 | None:intergenic |
| TGGCAAATGAGTCGGTAAAT+GGG | 0.513512 | 1_2:+71709856 | Msa0089950:CDS |
| GTGGAGAAGATGGGAATGAG+AGG | 0.514997 | 1_2:-71707315 | None:intergenic |
| ATATAAGACAATTGTATCAC+TGG | 0.516027 | 1_2:+71709836 | Msa0089950:CDS |
| ATAATAATAAACCAATGAAT+CGG | 0.516127 | 1_2:-71711965 | None:intergenic |
| TTATGCAGAGCGGAGGATTG+TGG | 0.516215 | 1_2:+71709172 | Msa0089950:CDS |
| TTCACCAGTGCAGTGTAAAG+TGG | 0.517047 | 1_2:-71711646 | None:intergenic |
| GAACTTGCTCATAGCTGGAC+TGG | 0.520607 | 1_2:+71708256 | Msa0089950:CDS |
| CGGTAAATGGGAGGATGCCA+AGG | 0.521443 | 1_2:+71709868 | Msa0089950:CDS |
| GAACGAGTGTCGAGGAAGAA+AGG | 0.524067 | 1_2:-71707497 | None:intergenic |
| TTGGGTCGATGGTTGGAGAG+AGG | 0.527128 | 1_2:-71707574 | None:intergenic |
| TACCTTCTGTCCACAGTACA+AGG | 0.527979 | 1_2:-71709773 | None:intergenic |
| TTCCTTAAAGCAAACATCCC+TGG | 0.529774 | 1_2:+71709732 | Msa0089950:CDS |
| TGTTGAATATTGGAATTGGT+TGG | 0.529933 | 1_2:+71709222 | Msa0089950:CDS |
| CTCCAACGGGCTATTTCATG+CGG | 0.531241 | 1_2:+71711556 | Msa0089950:CDS |
| CGTGGTGCGTCGCGAATCGT+TGG | 0.532581 | 1_2:+71707859 | Msa0089950:CDS |
| GGATTCTCCATACCACCATA+AGG | 0.532655 | 1_2:-71708166 | None:intergenic |
| CTTCTTCCTCTGCTCTTCAG+TGG | 0.533538 | 1_2:+71707666 | Msa0089950:CDS |
| AGTGGTGGAAGAGTTTGAGA+TGG | 0.533645 | 1_2:+71707922 | Msa0089950:CDS |
| ATGAATCGGTTGGGATGTCA+CGG | 0.536763 | 1_2:-71711951 | None:intergenic |
| GAAGCATGAATGGTTGAAGA+TGG | 0.537383 | 1_2:-71707440 | None:intergenic |
| AGCTTGATAACAGGGAGGTG+GGG | 0.541507 | 1_2:+71707987 | Msa0089950:CDS |
| GGGATTGGAGTGGATTGAGA+AGG | 0.542508 | 1_2:-71707545 | None:intergenic |
| AGGATTGTGGAGGCTGTACA+AGG | 0.543120 | 1_2:+71709185 | Msa0089950:CDS |
| TTAAGGTGTCATTTCTCCAA+CGG | 0.543544 | 1_2:+71711542 | Msa0089950:CDS |
| ATACCACCATAAGGAAAACT+AGG | 0.544779 | 1_2:-71708157 | None:intergenic |
| CAGCTGCTAAAGAGTTTGAT+GGG | 0.545330 | 1_2:+71708056 | Msa0089950:CDS |
| GAAGAGTGCAGAAGCATGAA+TGG | 0.547456 | 1_2:-71707450 | None:intergenic |
| CTGAGGATATGATTAGGGAA+GGG | 0.548838 | 1_2:+71708080 | Msa0089950:CDS |
| GGGAAATGTGAGTGGTTGGT+GGG | 0.549128 | 1_2:-71707397 | None:intergenic |
| GAATATTGGAATTGGTTGGA+GGG | 0.549610 | 1_2:+71709226 | Msa0089950:CDS |
| CCGTCCACTTTACACTGCAC+TGG | 0.552455 | 1_2:+71711642 | Msa0089950:CDS |
| GTGAGGGAAATGTGAGTGGT+TGG | 0.552782 | 1_2:-71707401 | None:intergenic |
| CTGAAGAGCAGAGGAAGAAG+GGG | 0.555079 | 1_2:-71707663 | None:intergenic |
| GAAAACAGAACGGACATGAA+TGG | 0.555134 | 1_2:-71707747 | None:intergenic |
| CTTGTTGCGCATTGAACGTG+AGG | 0.557122 | 1_2:+71709373 | Msa0089950:CDS |
| TCGGGCTCAAAAGCATCAGA+TGG | 0.557199 | 1_2:-71709804 | None:intergenic |
| GAATAACAAACCCTAATGGC+TGG | 0.558142 | 1_2:-71707785 | None:intergenic |
| AAAAGAATTGACGGCTGTGA+TGG | 0.558281 | 1_2:+71707826 | Msa0089950:CDS |
| ATTGTTTGGAAATTATGAGT+GGG | 0.560386 | 1_2:+71708108 | Msa0089950:CDS |
| AAACGTTAAAAGAAGTTGGA+AGG | 0.561275 | 1_2:+71711608 | Msa0089950:CDS |
| TGAATATTGGAATTGGTTGG+AGG | 0.561291 | 1_2:+71709225 | Msa0089950:CDS |
| TGAAGCTGCGCCTCAACTGT+TGG | 0.561608 | 1_2:+71708030 | Msa0089950:CDS |
| GGATTGGAGTGGATTGAGAA+GGG | 0.561965 | 1_2:-71707544 | None:intergenic |
| TGAGGATGTAGAGAGGTTCA+AGG | 0.565967 | 1_2:+71709256 | Msa0089950:CDS |
| GAGAAGGGTCAGTGATGGAG+TGG | 0.567983 | 1_2:-71707529 | None:intergenic |
| TGAGCTTGATAACAGGGAGG+TGG | 0.570830 | 1_2:+71707985 | Msa0089950:CDS |
| GCAAATGCAAATAGGTAAGG+TGG | 0.574543 | 1_2:-71707956 | None:intergenic |
| TGTTTGCTTTAAGGAAGTCA+AGG | 0.574551 | 1_2:-71709725 | None:intergenic |
| GGTGGTGTAAGTGATGAGAA+AGG | 0.577397 | 1_2:-71707639 | None:intergenic |
| TGTTACCATCCTATTGCTCA+AGG | 0.578149 | 1_2:+71711730 | Msa0089950:CDS |
| AAGAGCAGAGGAAGAAGGGG+AGG | 0.581508 | 1_2:-71707660 | None:intergenic |
| TACAATTGTCTTATATACAC+TGG | 0.582319 | 1_2:-71709829 | None:intergenic |
| TGTTGGAGAGTGGAGAAGAT+GGG | 0.582821 | 1_2:-71707324 | None:intergenic |
| CTGAGTGGCAAGGTCAGGAG+TGG | 0.584567 | 1_2:+71709904 | Msa0089950:CDS |
| ATGAGCCACAACCTGTGCAC+CGG | 0.585437 | 1_2:-71708233 | None:intergenic |
| TGTATCACTGGCAAATGAGT+CGG | 0.586369 | 1_2:+71709848 | Msa0089950:CDS |
| AGGAAGAAAGGACCAGAGTG+AGG | 0.587311 | 1_2:-71707485 | None:intergenic |
| GGAAATCTAAGTAGAGTGTG+AGG | 0.587348 | 1_2:-71707418 | None:intergenic |
| GTTTAAATGAGGATGTAGAG+AGG | 0.589075 | 1_2:+71709249 | Msa0089950:CDS |
| GATTGTTTGGAAATTATGAG+TGG | 0.590199 | 1_2:+71708107 | Msa0089950:CDS |
| AAGCATGAATGGTTGAAGAT+GGG | 0.591646 | 1_2:-71707439 | None:intergenic |
| ACTGAGGATATGATTAGGGA+AGG | 0.591906 | 1_2:+71708079 | Msa0089950:CDS |
| ACTGCAAATGCAAATAGGTA+AGG | 0.591923 | 1_2:-71707959 | None:intergenic |
| TCAGCATAAACCCTAGTCCT+GGG | 0.593338 | 1_2:-71708010 | None:intergenic |
| TAGTTTGTAGCGTGAATCCA+AGG | 0.594849 | 1_2:-71711497 | None:intergenic |
| GACCTTGTACTGTGGACAGA+AGG | 0.594960 | 1_2:+71709771 | Msa0089950:CDS |
| GGTGTGGTTAGAAAGAGTGA+GGG | 0.595482 | 1_2:-71707615 | None:intergenic |
| ATAAGATTGACCTTGTACTG+TGG | 0.602282 | 1_2:+71709763 | Msa0089950:CDS |
| CAATCTTATTCTCTATGCCA+GGG | 0.602858 | 1_2:-71709749 | None:intergenic |
| GACCCCGACGGTTATTAAAG+GGG | 0.605150 | 1_2:+71708204 | Msa0089950:CDS |
| ATGGCTGGTGTGTCCTGACA+AGG | 0.606492 | 1_2:-71707770 | None:intergenic |
| TATTGCTCAAGGTGTTGTTG+AGG | 0.607471 | 1_2:+71711741 | Msa0089950:CDS |
| GGTAAATGGGAGGATGCCAA+GGG | 0.608195 | 1_2:+71709869 | Msa0089950:CDS |
| GGAAGAAAGGACCAGAGTGA+GGG | 0.608235 | 1_2:-71707484 | None:intergenic |
| GTACTGTGGACAGAAGGTAC+TGG | 0.608281 | 1_2:+71709777 | Msa0089950:CDS |
| ATGGTGGTATGGAGAATCCA+AGG | 0.609099 | 1_2:+71708170 | Msa0089950:CDS |
| GCAGCTGAATCCAACAGTTG+AGG | 0.610214 | 1_2:-71708040 | None:intergenic |
| GATGAAATTGCTGAGTGGCA+AGG | 0.610794 | 1_2:+71709894 | Msa0089950:CDS |
| CAACACCTTGAGCAATAGGA+TGG | 0.611866 | 1_2:-71711735 | None:intergenic |
| ACTCTCCAAAACCCTCACTC+TGG | 0.614596 | 1_2:+71707473 | Msa0089950:CDS |
| AATCGATTTGAACTTGAAGG+TGG | 0.615528 | 1_2:-71709688 | None:intergenic |
| TAAGAGCCACTGAAGAGCAG+AGG | 0.620046 | 1_2:-71707672 | None:intergenic |
| AAATGGGAGGATGCCAAGGG+AGG | 0.627760 | 1_2:+71709872 | Msa0089950:CDS |
| CCAACCATCGACCCAATCAA+GGG | 0.629595 | 1_2:+71707581 | Msa0089950:CDS |
| TGTGTATGAGTGAGGATCAA+CGG | 0.632074 | 1_2:-71707363 | None:intergenic |
| CGGGCTCAAAAGCATCAGAT+GGG | 0.632935 | 1_2:-71709803 | None:intergenic |
| TTCGTCCAAAGGTAGAGTGG+TGG | 0.634737 | 1_2:+71707907 | Msa0089950:CDS |
| TCACTACTTATGCAGAGCGG+AGG | 0.636175 | 1_2:+71709165 | Msa0089950:CDS |
| AAGTGATGAGAAAGGAGGTG+TGG | 0.636386 | 1_2:-71707631 | None:intergenic |
| TGAATCGGTTGGGATGTCAC+GGG | 0.640289 | 1_2:-71711950 | None:intergenic |
| TGAGTGGCAAGGTCAGGAGT+GGG | 0.641061 | 1_2:+71709905 | Msa0089950:CDS |
| GTTGAGTCTGTGTATGAGTG+AGG | 0.642736 | 1_2:-71707371 | None:intergenic |
| AGTTGGTGAGCTTGATAACA+GGG | 0.645497 | 1_2:+71707979 | Msa0089950:CDS |
| CCTGAGAATACACATCATCA+GGG | 0.646341 | 1_2:-71709325 | None:intergenic |
| GAATTCGTCCAAAGGTAGAG+TGG | 0.646482 | 1_2:+71707904 | Msa0089950:CDS |
| CAAAGCTTACTATAGCGAAG+TGG | 0.648966 | 1_2:+71711582 | Msa0089950:CDS |
| AGTGATGGAGTGGATTTCAA+GGG | 0.649580 | 1_2:-71707519 | None:intergenic |
| CCAGTGCAGTGTAAAGTGGA+CGG | 0.649830 | 1_2:-71711642 | None:intergenic |
| GAGTGTGAGGGAAATGTGAG+TGG | 0.652886 | 1_2:-71707405 | None:intergenic |
| GAAATCTAAGTAGAGTGTGA+GGG | 0.656090 | 1_2:-71707417 | None:intergenic |
| TTTCAAGGGAACGAGTGTCG+AGG | 0.658695 | 1_2:-71707505 | None:intergenic |
| TAAAGAGTTTGATGGGACTG+AGG | 0.660055 | 1_2:+71708063 | Msa0089950:CDS |
| TGCAGAGCGGAGGATTGTGG+AGG | 0.661106 | 1_2:+71709175 | Msa0089950:CDS |
| ATCCCCTTTAATAACCGTCG+GGG | 0.664328 | 1_2:-71708206 | None:intergenic |
| ATCGGTTGGGATGTCACGGG+AGG | 0.669947 | 1_2:-71711947 | None:intergenic |
| ACCAATTCCAATATTCAACA+TGG | 0.671117 | 1_2:-71709219 | None:intergenic |
| CCTGACAAGGGAAAACAGAA+CGG | 0.671630 | 1_2:-71707757 | None:intergenic |
| CAAATGAGTCGGTAAATGGG+AGG | 0.681045 | 1_2:+71709859 | Msa0089950:CDS |
| ATCCGCATGAAATAGCCCGT+TGG | 0.682282 | 1_2:-71711558 | None:intergenic |
| TGGCTGGTGTGTCCTGACAA+GGG | 0.699195 | 1_2:-71707769 | None:intergenic |
| GGTGTAAGTGATGAGAAAGG+AGG | 0.699630 | 1_2:-71707636 | None:intergenic |
| ACTGCACTGGTGAAAGACAG+TGG | 0.714971 | 1_2:+71711655 | Msa0089950:CDS |
| TGGTATGGAGAATCCAAGGA+TGG | 0.719290 | 1_2:+71708174 | Msa0089950:CDS |
| CCACCATAAGGAAAACTAGG+TGG | 0.722795 | 1_2:-71708154 | None:intergenic |
| TGTGATGGCTGCAAAACACG+TGG | 0.723313 | 1_2:+71707841 | Msa0089950:CDS |
| GGGAGGATGAAATTGCTGAG+TGG | 0.740524 | 1_2:+71709889 | Msa0089950:CDS |
| TGGTGAGCTTGATAACAGGG+AGG | 0.768194 | 1_2:+71707982 | Msa0089950:CDS |
| GATTCACTACTTATGCAGAG+CGG | 0.818951 | 1_2:+71709162 | Msa0089950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTACAATCAATAAAATA+TGG | + | chr1_2:71711866-71711885 | Msa0089950:three_prime_UTR | 10.0% |
| !!! | AATGTAAGCTTTATAAATAT+AGG | - | chr1_2:71709421-71709440 | None:intergenic | 15.0% |
| !!! | GTTAATATAATTTTTCATTC+TGG | - | chr1_2:71710090-71710109 | None:intergenic | 15.0% |
| !! | CTTAAAAATAAATTATGCTT+GGG | - | chr1_2:71711188-71711207 | None:intergenic | 15.0% |
| !! | TCTTAAAAATAAATTATGCT+TGG | - | chr1_2:71711189-71711208 | None:intergenic | 15.0% |
| !!! | ATAATATATACTTTCTTTTC+TGG | + | chr1_2:71711272-71711291 | Msa0089950:intron | 15.0% |
| !! | AGAATAATTAATATAAAGCT+CGG | + | chr1_2:71711423-71711442 | Msa0089950:intron | 15.0% |
| !! | ATAATAATAAACCAATGAAT+CGG | - | chr1_2:71711968-71711987 | None:intergenic | 15.0% |
| !! | GTAACTAATATGAAAACAAT+TGG | + | chr1_2:71708500-71708519 | Msa0089950:intron | 20.0% |
| !! | TTAAAACACGAAAAATAATC+AGG | - | chr1_2:71709454-71709473 | None:intergenic | 20.0% |
| !!! | ACTTGTACTTTATTTATTAG+TGG | + | chr1_2:71709601-71709620 | Msa0089950:intron | 20.0% |
| !!! | ATATAATTTTTCATTCTGGT+AGG | - | chr1_2:71710086-71710105 | None:intergenic | 20.0% |
| !!! | AAAAACATTGATTTTTCCTA+CGG | + | chr1_2:71710116-71710135 | Msa0089950:intron | 20.0% |
| !! | ATAGTAAAATGAGTTAATGA+AGG | - | chr1_2:71710343-71710362 | None:intergenic | 20.0% |
| !!! | TTTTTATATTGCTTCATAGA+TGG | + | chr1_2:71710796-71710815 | Msa0089950:intron | 20.0% |
| !! | ATCAAAGGTTAAATATTTGA+TGG | - | chr1_2:71711109-71711128 | None:intergenic | 20.0% |
| !! | TAATATAATGACCAACATAA+TGG | - | chr1_2:71711320-71711339 | None:intergenic | 20.0% |
| !! | TGGTTTATTATTATAGATTG+AGG | + | chr1_2:71711974-71711993 | Msa0089950:three_prime_UTR | 20.0% |
| !! | GGTTTATTATTATAGATTGA+GGG | + | chr1_2:71711975-71711994 | Msa0089950:three_prime_UTR | 20.0% |
| !! | AATTGCTTATACTTTGTATT+CGG | + | chr1_2:71712028-71712047 | Msa0089950:three_prime_UTR | 20.0% |
| !!! | TGTTTTGTTAAACTTGATTG+AGG | - | chr1_2:71707273-71707292 | None:intergenic | 25.0% |
| !!! | TGTTTTTTGTTGAAAGTTTG+AGG | - | chr1_2:71707701-71707720 | None:intergenic | 25.0% |
| ! | ATTGTTTGGAAATTATGAGT+GGG | + | chr1_2:71708108-71708127 | Msa0089950:CDS | 25.0% |
| !! | TTGTTTTCCTAAACTATTAC+GGG | - | chr1_2:71708477-71708496 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCCTAAACTATTA+CGG | - | chr1_2:71708478-71708497 | None:intergenic | 25.0% |
| ! | CACAAATACTAAAGCAATTA+AGG | - | chr1_2:71708631-71708650 | None:intergenic | 25.0% |
| !! | GCAAAGGTTACATTTTTAAT+TGG | - | chr1_2:71708906-71708925 | None:intergenic | 25.0% |
| ! | AGATAAAGATTCCAAAACAA+AGG | - | chr1_2:71708979-71708998 | None:intergenic | 25.0% |
| !! | TCTTTGCTAGTTTATTTCAT+TGG | + | chr1_2:71709020-71709039 | Msa0089950:intron | 25.0% |
| !! | AAAGGTCAAATGTTTAACTT+TGG | - | chr1_2:71709113-71709132 | None:intergenic | 25.0% |
| !! | CAATGCATATTTTGTCATAT+TGG | + | chr1_2:71709572-71709591 | Msa0089950:intron | 25.0% |
| ! | TACAATTGTCTTATATACAC+TGG | - | chr1_2:71709832-71709851 | None:intergenic | 25.0% |
| ! | ATATAAGACAATTGTATCAC+TGG | + | chr1_2:71709836-71709855 | Msa0089950:CDS | 25.0% |
| ! | AGTAAAAGAAATGAAAGGAA+AGG | - | chr1_2:71710390-71710409 | None:intergenic | 25.0% |
| ! | AGTAAGTTAGACTATTGAAA+TGG | + | chr1_2:71710625-71710644 | Msa0089950:intron | 25.0% |
| ! | AGTAAGTAGAATGAAATCAA+GGG | - | chr1_2:71710653-71710672 | None:intergenic | 25.0% |
| ! | ATATGGTCTGGAAAATATAT+AGG | + | chr1_2:71710830-71710849 | Msa0089950:intron | 25.0% |
| ! | ATTTATAGAACTGAAAGCTA+AGG | - | chr1_2:71710871-71710890 | None:intergenic | 25.0% |
| !! | AAATATTTGATGGCTAACTT+AGG | - | chr1_2:71711099-71711118 | None:intergenic | 25.0% |
| ! | TTTAAAGGTTCATATTTCAG+AGG | - | chr1_2:71711157-71711176 | None:intergenic | 25.0% |
| !!! | TATATACTTTCTTTTCTGGT+AGG | + | chr1_2:71711276-71711295 | Msa0089950:intron | 25.0% |
| !! | TTATATTGCTCTTTTGCTTT+TGG | + | chr1_2:71711363-71711382 | Msa0089950:intron | 25.0% |
| ! | ATAATTAATATAAAGCTCGG+TGG | + | chr1_2:71711426-71711445 | Msa0089950:intron | 25.0% |
| ! | TATGTTGTATAATATTGTGC+AGG | + | chr1_2:71711468-71711487 | Msa0089950:intron | 25.0% |
| !!! | TATAGAAGCATCAGAATAAA+AGG | - | chr1_2:71711895-71711914 | None:intergenic | 25.0% |
| ! | TTTTTGTTGAAAGTTTGAGG+AGG | - | chr1_2:71707698-71707717 | None:intergenic | 30.0% |
| GACATTGAGTATAGACAAAA+GGG | - | chr1_2:71707724-71707743 | None:intergenic | 30.0% | |
| TGACATTGAGTATAGACAAA+AGG | - | chr1_2:71707725-71707744 | None:intergenic | 30.0% | |
| !!! | ATTCTTTTGGAACATTCAAC+CGG | - | chr1_2:71707814-71707833 | None:intergenic | 30.0% |
| GAATGTTCCAAAAGAATTGA+CGG | + | chr1_2:71707817-71707836 | Msa0089950:CDS | 30.0% | |
| !! | ATGATGATGATGAGTGTTTT+GGG | + | chr1_2:71707882-71707901 | Msa0089950:CDS | 30.0% |
| GATTGTTTGGAAATTATGAG+TGG | + | chr1_2:71708107-71708126 | Msa0089950:CDS | 30.0% | |
| ! | ACAAGACCAATGAACATTTT+TGG | + | chr1_2:71708293-71708312 | Msa0089950:CDS | 30.0% |
| ! | TGTTTTCCTAAACTATTACG+GGG | - | chr1_2:71708476-71708495 | None:intergenic | 30.0% |
| ! | GCAATTAAGGCTATGTTTTT+GGG | - | chr1_2:71708618-71708637 | None:intergenic | 30.0% |
| ! | AGCAATTAAGGCTATGTTTT+TGG | - | chr1_2:71708619-71708638 | None:intergenic | 30.0% |
| CTAGTCTGAAAATTTACTTG+TGG | + | chr1_2:71708712-71708731 | Msa0089950:intron | 30.0% | |
| AGAAAAATCACTACAGAAAC+AGG | + | chr1_2:71708772-71708791 | Msa0089950:intron | 30.0% | |
| ! | TTATTATATATGTGCTGCTC+CGG | + | chr1_2:71708801-71708820 | Msa0089950:intron | 30.0% |
| AACATGCAAACTGTAAAAAC+CGG | - | chr1_2:71708823-71708842 | None:intergenic | 30.0% | |
| AAGAATGCAAAAACTAGCAA+AGG | - | chr1_2:71708922-71708941 | None:intergenic | 30.0% | |
| ! | TTTTGCATTCTTCCTTTGAT+TGG | + | chr1_2:71708930-71708949 | Msa0089950:intron | 30.0% |
| !! | AAACCAAGAAACCTTTGTTT+TGG | + | chr1_2:71708965-71708984 | Msa0089950:intron | 30.0% |
| ATTCCAAAACAAAGGTTTCT+TGG | - | chr1_2:71708971-71708990 | None:intergenic | 30.0% | |
| ! | GTTTATTTCATTGGTTGACA+TGG | + | chr1_2:71709029-71709048 | Msa0089950:intron | 30.0% |
| ! | GTCAAATGTTTAACTTTGGT+AGG | - | chr1_2:71709109-71709128 | None:intergenic | 30.0% |
| AATCAACAATGACGACTTAA+AGG | - | chr1_2:71709131-71709150 | None:intergenic | 30.0% | |
| !! | TCATTGTTGATTGTGGTTTT+AGG | + | chr1_2:71709139-71709158 | Msa0089950:intron | 30.0% |
| !! | CATTGTTGATTGTGGTTTTA+GGG | + | chr1_2:71709140-71709159 | Msa0089950:intron | 30.0% |
| AAAAGAGCCATGTTGAATAT+TGG | + | chr1_2:71709212-71709231 | Msa0089950:CDS | 30.0% | |
| ACCAATTCCAATATTCAACA+TGG | - | chr1_2:71709222-71709241 | None:intergenic | 30.0% | |
| TGTTGAATATTGGAATTGGT+TGG | + | chr1_2:71709222-71709241 | Msa0089950:CDS | 30.0% | |
| GACTAAGCTAAAAAATAACC+AGG | + | chr1_2:71709292-71709311 | Msa0089950:CDS | 30.0% | |
| AAGCTAAAAAATAACCAGGA+AGG | + | chr1_2:71709296-71709315 | Msa0089950:CDS | 30.0% | |
| !!! | TTCATTTGCTGTTTTTGTTC+TGG | + | chr1_2:71709540-71709559 | Msa0089950:intron | 30.0% |
| !!! | TCATTTGCTGTTTTTGTTCT+GGG | + | chr1_2:71709541-71709560 | Msa0089950:intron | 30.0% |
| !! | ATCAATCGATTTGAACTTGA+AGG | - | chr1_2:71709694-71709713 | None:intergenic | 30.0% |
| TGAGAAGCTTCAATAGATTT+CGG | - | chr1_2:71709951-71709970 | None:intergenic | 30.0% | |
| TCTTAAGTTCTCAACAACTA+TGG | - | chr1_2:71710017-71710036 | None:intergenic | 30.0% | |
| ! | TCAATCAAGTTGCCAAATAA+GGG | - | chr1_2:71710217-71710236 | None:intergenic | 30.0% |
| ! | ATCAATCAAGTTGCCAAATA+AGG | - | chr1_2:71710218-71710237 | None:intergenic | 30.0% |
| !! | ATGAGCTGCTCATTTTTATA+TGG | + | chr1_2:71710247-71710266 | Msa0089950:intron | 30.0% |
| ! | ACTCATTTTACTATTACTGC+TGG | + | chr1_2:71710349-71710368 | Msa0089950:intron | 30.0% |
| AACAGAAAGAGAATAAAGAG+GGG | - | chr1_2:71710414-71710433 | None:intergenic | 30.0% | |
| GAACAGAAAGAGAATAAAGA+GGG | - | chr1_2:71710415-71710434 | None:intergenic | 30.0% | |
| TGAACAGAAAGAGAATAAAG+AGG | - | chr1_2:71710416-71710435 | None:intergenic | 30.0% | |
| AATTTATCAAATAGCAGCCA+TGG | + | chr1_2:71710435-71710454 | Msa0089950:intron | 30.0% | |
| ACGTTTAATGGCAGAAATAA+TGG | + | chr1_2:71710522-71710541 | Msa0089950:intron | 30.0% | |
| !!! | AAATAGCTGATTTTTTGCCA+TGG | + | chr1_2:71710549-71710568 | Msa0089950:intron | 30.0% |
| !!! | TCTTATCGATTTTGGATAGT+GGG | - | chr1_2:71710575-71710594 | None:intergenic | 30.0% |
| CAGTAAGTAGAATGAAATCA+AGG | - | chr1_2:71710654-71710673 | None:intergenic | 30.0% | |
| ! | TTCTACTTACTGACTAGAAT+AGG | + | chr1_2:71710662-71710681 | Msa0089950:intron | 30.0% |
| CTAGTGTCATACATTTCTAT+TGG | + | chr1_2:71710894-71710913 | Msa0089950:intron | 30.0% | |
| ATCAAAGTTGTGATCATCAA+AGG | - | chr1_2:71711124-71711143 | None:intergenic | 30.0% | |
| ATCTGAATCCAAAGATTATG+AGG | + | chr1_2:71711519-71711538 | Msa0089950:CDS | 30.0% | |
| ATCCAAAGATTATGAGGTTA+AGG | + | chr1_2:71711525-71711544 | Msa0089950:CDS | 30.0% | |
| GAGAAAACGTTAAAAGAAGT+TGG | + | chr1_2:71711604-71711623 | Msa0089950:CDS | 30.0% | |
| AAACGTTAAAAGAAGTTGGA+AGG | + | chr1_2:71711608-71711627 | Msa0089950:CDS | 30.0% | |
| AATAAACCAATGAATCGGTT+GGG | - | chr1_2:71711963-71711982 | None:intergenic | 30.0% | |
| TAATAAACCAATGAATCGGT+TGG | - | chr1_2:71711964-71711983 | None:intergenic | 30.0% | |
| GAAATCTAAGTAGAGTGTGA+GGG | - | chr1_2:71707420-71707439 | None:intergenic | 35.0% | |
| AAGCATGAATGGTTGAAGAT+GGG | - | chr1_2:71707442-71707461 | None:intergenic | 35.0% | |
| ! | TGAGTTTAGAACCCTTGATT+GGG | - | chr1_2:71707595-71707614 | None:intergenic | 35.0% |
| !! | AGCCATTAGGGTTTGTTATT+CGG | + | chr1_2:71707787-71707806 | Msa0089950:CDS | 35.0% |
| !!! | TTCTTTTGGAACATTCAACC+GGG | - | chr1_2:71707813-71707832 | None:intergenic | 35.0% |
| !! | GATGATGATGATGAGTGTTT+TGG | + | chr1_2:71707881-71707900 | Msa0089950:CDS | 35.0% |
| ACTGCAAATGCAAATAGGTA+AGG | - | chr1_2:71707962-71707981 | None:intergenic | 35.0% | |
| TACCTATTTGCATTTGCAGT+TGG | + | chr1_2:71707962-71707981 | Msa0089950:CDS | 35.0% | |
| ATACCACCATAAGGAAAACT+AGG | - | chr1_2:71708160-71708179 | None:intergenic | 35.0% | |
| ! | TAGTTTTCCTTATGGTGGTA+TGG | + | chr1_2:71708159-71708178 | Msa0089950:CDS | 35.0% |
| GTTGAGCCAAAAATGTTCAT+TGG | - | chr1_2:71708302-71708321 | None:intergenic | 35.0% | |
| GTATACCTTTCGTACATGTT+TGG | + | chr1_2:71708343-71708362 | Msa0089950:intron | 35.0% | |
| TCAATCCAAACATGTACGAA+AGG | - | chr1_2:71708351-71708370 | None:intergenic | 35.0% | |
| AGTATTTGTGTGTCTGCAAA+TGG | + | chr1_2:71708641-71708660 | Msa0089950:intron | 35.0% | |
| GTATTTGTGTGTCTGCAAAT+GGG | + | chr1_2:71708642-71708661 | Msa0089950:intron | 35.0% | |
| CATAAGCAAACCAGAATATG+AGG | - | chr1_2:71708675-71708694 | None:intergenic | 35.0% | |
| TTCTCGTTATGTGTATAACG+AGG | - | chr1_2:71708756-71708775 | None:intergenic | 35.0% | |
| GGAGCAGCACATATATAATA+AGG | - | chr1_2:71708802-71708821 | None:intergenic | 35.0% | |
| ! | TATTGTCGCTTCATCATTGT+AGG | + | chr1_2:71708849-71708868 | Msa0089950:intron | 35.0% |
| !!! | TCCTTTGATTGGCTTTCTTT+TGG | + | chr1_2:71708941-71708960 | Msa0089950:intron | 35.0% |
| TCCAAAAGAAAGCCAATCAA+AGG | - | chr1_2:71708945-71708964 | None:intergenic | 35.0% | |
| TGGTTGACATGGAGAAAAAT+TGG | + | chr1_2:71709040-71709059 | Msa0089950:intron | 35.0% | |
| ! | TAAGTCGTCATTGTTGATTG+TGG | + | chr1_2:71709132-71709151 | Msa0089950:intron | 35.0% |
| GCCATGTTGAATATTGGAAT+TGG | + | chr1_2:71709218-71709237 | Msa0089950:CDS | 35.0% | |
| TGAATATTGGAATTGGTTGG+AGG | + | chr1_2:71709225-71709244 | Msa0089950:CDS | 35.0% | |
| GAATATTGGAATTGGTTGGA+GGG | + | chr1_2:71709226-71709245 | Msa0089950:CDS | 35.0% | |
| AATATTGGAATTGGTTGGAG+GGG | + | chr1_2:71709227-71709246 | Msa0089950:CDS | 35.0% | |
| GTTTAAATGAGGATGTAGAG+AGG | + | chr1_2:71709249-71709268 | Msa0089950:CDS | 35.0% | |
| AACTGGAAACCTTTCTCATA+TGG | - | chr1_2:71709353-71709372 | None:intergenic | 35.0% | |
| TTCTTGCGAAATGTACAGAT+TGG | + | chr1_2:71709627-71709646 | Msa0089950:intron | 35.0% | |
| TCTTGCGAAATGTACAGATT+GGG | + | chr1_2:71709628-71709647 | Msa0089950:intron | 35.0% | |
| TTCAGAAACTCATCAAATGC+AGG | - | chr1_2:71709657-71709676 | None:intergenic | 35.0% | |
| !! | AATCGATTTGAACTTGAAGG+TGG | - | chr1_2:71709691-71709710 | None:intergenic | 35.0% |
| !! | TGTTTGCTTTAAGGAAGTCA+AGG | - | chr1_2:71709728-71709747 | None:intergenic | 35.0% |
| CAATCTTATTCTCTATGCCA+GGG | - | chr1_2:71709752-71709771 | None:intergenic | 35.0% | |
| TCAATCTTATTCTCTATGCC+AGG | - | chr1_2:71709753-71709772 | None:intergenic | 35.0% | |
| ATAAGATTGACCTTGTACTG+TGG | + | chr1_2:71709763-71709782 | Msa0089950:CDS | 35.0% | |
| TGTCTTATATACACTGGAGT+CGG | - | chr1_2:71709826-71709845 | None:intergenic | 35.0% | |
| GAAATCTATTGAAGCTTCTC+AGG | + | chr1_2:71709950-71709969 | Msa0089950:CDS | 35.0% | |
| TAAGTTCTCAACAACTATGG+CGG | - | chr1_2:71710014-71710033 | None:intergenic | 35.0% | |
| TTAAGATCAACATCCTACCT+AGG | + | chr1_2:71710031-71710050 | Msa0089950:intron | 35.0% | |
| ACATTGTATGTGCCCTTATT+TGG | + | chr1_2:71710202-71710221 | Msa0089950:intron | 35.0% | |
| AACTGATCACTACATGTTTG+TGG | + | chr1_2:71710309-71710328 | Msa0089950:intron | 35.0% | |
| TTTACTATTACTGCTGGTCA+TGG | + | chr1_2:71710355-71710374 | Msa0089950:intron | 35.0% | |
| TTACTATTACTGCTGGTCAT+GGG | + | chr1_2:71710356-71710375 | Msa0089950:intron | 35.0% | |
| GGGGAAGTAAAAGAAATGAA+AGG | - | chr1_2:71710395-71710414 | None:intergenic | 35.0% | |
| !!! | GGATTTTTTGCCTATTGCTA+TGG | + | chr1_2:71710471-71710490 | Msa0089950:intron | 35.0% |
| TACAAATTGGCCATAGCAAT+AGG | - | chr1_2:71710484-71710503 | None:intergenic | 35.0% | |
| TTGCTATGGCCAATTTGTAA+AGG | + | chr1_2:71710485-71710504 | Msa0089950:intron | 35.0% | |
| CACTGTCATCCTTTACAAAT+TGG | - | chr1_2:71710497-71710516 | None:intergenic | 35.0% | |
| !!! | GTCTTATCGATTTTGGATAG+TGG | - | chr1_2:71710576-71710595 | None:intergenic | 35.0% |
| ! | TCTTGAGAATTGGTTGTTTC+TGG | + | chr1_2:71710709-71710728 | Msa0089950:intron | 35.0% |
| AGATGGAGAGATGTGATATA+TGG | + | chr1_2:71710813-71710832 | Msa0089950:intron | 35.0% | |
| GGATTTGATATGTTAGTCAC+TGG | + | chr1_2:71710915-71710934 | Msa0089950:intron | 35.0% | |
| !! | ACAATATTGAAGAGTGCTTC+AGG | + | chr1_2:71710949-71710968 | Msa0089950:intron | 35.0% |
| !!! | GCTTGGGTGTATTGTTTTAA+AGG | - | chr1_2:71711172-71711191 | None:intergenic | 35.0% |
| ! | ATATAAAGGAGGTTTGGTAG+TGG | - | chr1_2:71711223-71711242 | None:intergenic | 35.0% |
| AGAATAAGAATGAGCAGCAT+GGG | - | chr1_2:71711248-71711267 | None:intergenic | 35.0% | |
| TAGAATAAGAATGAGCAGCA+TGG | - | chr1_2:71711249-71711268 | None:intergenic | 35.0% | |
| CAGTTCATATGCCATTATGT+TGG | + | chr1_2:71711306-71711325 | Msa0089950:intron | 35.0% | |
| TCCACTTTAAGCTCTTCAAA+AGG | + | chr1_2:71711386-71711405 | Msa0089950:intron | 35.0% | |
| !! | TCCTTTTGAAGAGCTTAAAG+TGG | - | chr1_2:71711390-71711409 | None:intergenic | 35.0% |
| ! | TTAATATAAAGCTCGGTGGA+AGG | + | chr1_2:71711430-71711449 | Msa0089950:intron | 35.0% |
| CACCTTAACCTCATAATCTT+TGG | - | chr1_2:71711530-71711549 | None:intergenic | 35.0% | |
| !! | TTAAGGTGTCATTTCTCCAA+CGG | + | chr1_2:71711542-71711561 | Msa0089950:CDS | 35.0% |
| CTACATATGCTTGCCAAAAA+TGG | - | chr1_2:71711767-71711786 | None:intergenic | 35.0% | |
| ! | TTGTTGTTGTTGTTGGAGAG+TGG | - | chr1_2:71707337-71707356 | None:intergenic | 40.0% |
| CTCTCCAACAACAACAACAA+TGG | + | chr1_2:71707337-71707356 | Msa0089950:exon | 40.0% | |
| TGTGTATGAGTGAGGATCAA+CGG | - | chr1_2:71707366-71707385 | None:intergenic | 40.0% | |
| GGAAATCTAAGTAGAGTGTG+AGG | - | chr1_2:71707421-71707440 | None:intergenic | 40.0% | |
| GAAGCATGAATGGTTGAAGA+TGG | - | chr1_2:71707443-71707462 | None:intergenic | 40.0% | |
| ! | AGTGATGGAGTGGATTTCAA+GGG | - | chr1_2:71707522-71707541 | None:intergenic | 40.0% |
| ! | GTGAGTTTAGAACCCTTGAT+TGG | - | chr1_2:71707596-71707615 | None:intergenic | 40.0% |
| GAAAACAGAACGGACATGAA+TGG | - | chr1_2:71707750-71707769 | None:intergenic | 40.0% | |
| GAATAACAAACCCTAATGGC+TGG | - | chr1_2:71707788-71707807 | None:intergenic | 40.0% | |
| ! | ATCACAGCCGTCAATTCTTT+TGG | - | chr1_2:71707827-71707846 | None:intergenic | 40.0% |
| AAAAGAATTGACGGCTGTGA+TGG | + | chr1_2:71707826-71707845 | Msa0089950:CDS | 40.0% | |
| !!! | TGTTTTGGGAATTCGTCCAA+AGG | + | chr1_2:71707896-71707915 | Msa0089950:CDS | 40.0% |
| GCAAATAGGTAAGGTGGAAT+TGG | - | chr1_2:71707953-71707972 | None:intergenic | 40.0% | |
| GCAAATGCAAATAGGTAAGG+TGG | - | chr1_2:71707959-71707978 | None:intergenic | 40.0% | |
| CACCAACTGCAAATGCAAAT+AGG | - | chr1_2:71707967-71707986 | None:intergenic | 40.0% | |
| !! | AGTTGGTGAGCTTGATAACA+GGG | + | chr1_2:71707979-71707998 | Msa0089950:CDS | 40.0% |
| TCAGCTGCTAAAGAGTTTGA+TGG | + | chr1_2:71708055-71708074 | Msa0089950:CDS | 40.0% | |
| CAGCTGCTAAAGAGTTTGAT+GGG | + | chr1_2:71708056-71708075 | Msa0089950:CDS | 40.0% | |
| TAAAGAGTTTGATGGGACTG+AGG | + | chr1_2:71708063-71708082 | Msa0089950:CDS | 40.0% | |
| ATGGGACTGAGGATATGATT+AGG | + | chr1_2:71708074-71708093 | Msa0089950:CDS | 40.0% | |
| TGGGACTGAGGATATGATTA+GGG | + | chr1_2:71708075-71708094 | Msa0089950:CDS | 40.0% | |
| ACTGAGGATATGATTAGGGA+AGG | + | chr1_2:71708079-71708098 | Msa0089950:CDS | 40.0% | |
| CTGAGGATATGATTAGGGAA+GGG | + | chr1_2:71708080-71708099 | Msa0089950:CDS | 40.0% | |
| TGAGGATATGATTAGGGAAG+GGG | + | chr1_2:71708081-71708100 | Msa0089950:CDS | 40.0% | |
| !! | GTGGGAGAGATTTGATTTGT+TGG | + | chr1_2:71708126-71708145 | Msa0089950:CDS | 40.0% |
| !! | TTGCCACCTAGTTTTCCTTA+TGG | + | chr1_2:71708151-71708170 | Msa0089950:CDS | 40.0% |
| GTTATTAAAGGGGATGCAAC+CGG | + | chr1_2:71708214-71708233 | Msa0089950:CDS | 40.0% | |
| !!! | TGAACATTTTTGGCTCAACG+AGG | + | chr1_2:71708303-71708322 | Msa0089950:CDS | 40.0% |
| TAAACTATTACGGGGAGTTG+TGG | - | chr1_2:71708468-71708487 | None:intergenic | 40.0% | |
| ACAACTCCCCGTAATAGTTT+AGG | + | chr1_2:71708467-71708486 | Msa0089950:intron | 40.0% | |
| GATTCACTACTTATGCAGAG+CGG | + | chr1_2:71709162-71709181 | Msa0089950:CDS | 40.0% | |
| AGAGAGGTTCAAGGACAATA+TGG | + | chr1_2:71709265-71709284 | Msa0089950:CDS | 40.0% | |
| CCTGAGAATACACATCATCA+GGG | - | chr1_2:71709328-71709347 | None:intergenic | 40.0% | |
| ACCTGAGAATACACATCATC+AGG | - | chr1_2:71709329-71709348 | None:intergenic | 40.0% | |
| TCTCAGGTTCCATATGAGAA+AGG | + | chr1_2:71709341-71709360 | Msa0089950:CDS | 40.0% | |
| TTCCTTAAAGCAAACATCCC+TGG | + | chr1_2:71709732-71709751 | Msa0089950:CDS | 40.0% | |
| GTCTTATATACACTGGAGTC+GGG | - | chr1_2:71709825-71709844 | None:intergenic | 40.0% | |
| TGTATCACTGGCAAATGAGT+CGG | + | chr1_2:71709848-71709867 | Msa0089950:CDS | 40.0% | |
| TGGCAAATGAGTCGGTAAAT+GGG | + | chr1_2:71709856-71709875 | Msa0089950:CDS | 40.0% | |
| ATCAACATCCTACCTAGGAT+CGG | + | chr1_2:71710036-71710055 | Msa0089950:intron | 40.0% | |
| TGTTGTACCTCATAACGAGT+TGG | - | chr1_2:71710143-71710162 | None:intergenic | 40.0% | |
| CAAAATTGCTGCACTCTTAG+AGG | + | chr1_2:71710286-71710305 | Msa0089950:intron | 40.0% | |
| GACAGTGTCATGACGTTTAA+TGG | + | chr1_2:71710510-71710529 | Msa0089950:intron | 40.0% | |
| !!! | GGGAACAGTCTTATCGATTT+TGG | - | chr1_2:71710583-71710602 | None:intergenic | 40.0% |
| ACACCAGAAAGAATCCTAGA+CGG | - | chr1_2:71710604-71710623 | None:intergenic | 40.0% | |
| ATGTGTCTGCTCTTGAGAAT+TGG | + | chr1_2:71710699-71710718 | Msa0089950:intron | 40.0% | |
| GAGAGATGTGATATATGGTC+TGG | + | chr1_2:71710818-71710837 | Msa0089950:intron | 40.0% | |
| GCCTAGAAATTCGTGTTTAG+TGG | + | chr1_2:71710977-71710996 | Msa0089950:intron | 40.0% | |
| GCCACTAAACACGAATTTCT+AGG | - | chr1_2:71710981-71711000 | None:intergenic | 40.0% | |
| CTCGTTAAAACAGTGCAGAA+AGG | + | chr1_2:71711000-71711019 | Msa0089950:intron | 40.0% | |
| TGGGCTATATAAAGGAGGTT+TGG | - | chr1_2:71711229-71711248 | None:intergenic | 40.0% | |
| ! | TAGTTTGTAGCGTGAATCCA+AGG | - | chr1_2:71711500-71711519 | None:intergenic | 40.0% |
| !! | TAAGGTGTCATTTCTCCAAC+GGG | + | chr1_2:71711543-71711562 | Msa0089950:CDS | 40.0% |
| CAAAGCTTACTATAGCGAAG+TGG | + | chr1_2:71711582-71711601 | Msa0089950:CDS | 40.0% | |
| !!! | TGCCAAGAGACTTTTTTCTG+AGG | + | chr1_2:71711699-71711718 | Msa0089950:CDS | 40.0% |
| AGCCTCAGAAAAAAGTCTCT+TGG | - | chr1_2:71711704-71711723 | None:intergenic | 40.0% | |
| TGTTACCATCCTATTGCTCA+AGG | + | chr1_2:71711730-71711749 | Msa0089950:CDS | 40.0% | |
| TCAACAACACCTTGAGCAAT+AGG | - | chr1_2:71711742-71711761 | None:intergenic | 40.0% | |
| !! | TATTGCTCAAGGTGTTGTTG+AGG | + | chr1_2:71711741-71711760 | Msa0089950:CDS | 40.0% |
| TGTTGGAGAGTGGAGAAGAT+GGG | - | chr1_2:71707327-71707346 | None:intergenic | 45.0% | |
| TTGTTGGAGAGTGGAGAAGA+TGG | - | chr1_2:71707328-71707347 | None:intergenic | 45.0% | |
| !! | GGTGCCATTGTTGTTGTTGT+TGG | - | chr1_2:71707344-71707363 | None:intergenic | 45.0% |
| GTGTATGAGTGAGGATCAAC+GGG | - | chr1_2:71707365-71707384 | None:intergenic | 45.0% | |
| GTTGAGTCTGTGTATGAGTG+AGG | - | chr1_2:71707374-71707393 | None:intergenic | 45.0% | |
| ! | GAAGAGTGCAGAAGCATGAA+TGG | - | chr1_2:71707453-71707472 | None:intergenic | 45.0% |
| ! | CAGTGATGGAGTGGATTTCA+AGG | - | chr1_2:71707523-71707542 | None:intergenic | 45.0% |
| !! | GGATTGGAGTGGATTGAGAA+GGG | - | chr1_2:71707547-71707566 | None:intergenic | 45.0% |
| TGGTTGGAGAGAGGGAAAAA+GGG | - | chr1_2:71707568-71707587 | None:intergenic | 45.0% | |
| ATGGTTGGAGAGAGGGAAAA+AGG | - | chr1_2:71707569-71707588 | None:intergenic | 45.0% | |
| GGTGTGGTTAGAAAGAGTGA+GGG | - | chr1_2:71707618-71707637 | None:intergenic | 45.0% | |
| AGGTGTGGTTAGAAAGAGTG+AGG | - | chr1_2:71707619-71707638 | None:intergenic | 45.0% | |
| AAGTGATGAGAAAGGAGGTG+TGG | - | chr1_2:71707634-71707653 | None:intergenic | 45.0% | |
| GGTGTAAGTGATGAGAAAGG+AGG | - | chr1_2:71707639-71707658 | None:intergenic | 45.0% | |
| GGTGGTGTAAGTGATGAGAA+AGG | - | chr1_2:71707642-71707661 | None:intergenic | 45.0% | |
| ACTGAAGAGCAGAGGAAGAA+GGG | - | chr1_2:71707667-71707686 | None:intergenic | 45.0% | |
| CCTGACAAGGGAAAACAGAA+CGG | - | chr1_2:71707760-71707779 | None:intergenic | 45.0% | |
| GGCCGAATAACAAACCCTAA+TGG | - | chr1_2:71707792-71707811 | None:intergenic | 45.0% | |
| !! | TTAGGGTTTGTTATTCGGCC+CGG | + | chr1_2:71707792-71707811 | Msa0089950:CDS | 45.0% |
| GAATTCGTCCAAAGGTAGAG+TGG | + | chr1_2:71707904-71707923 | Msa0089950:CDS | 45.0% | |
| ! | AGTGGTGGAAGAGTTTGAGA+TGG | + | chr1_2:71707922-71707941 | Msa0089950:CDS | 45.0% |
| !! | CAGTTGGTGAGCTTGATAAC+AGG | + | chr1_2:71707978-71707997 | Msa0089950:CDS | 45.0% |
| TCAGCATAAACCCTAGTCCT+GGG | - | chr1_2:71708013-71708032 | None:intergenic | 45.0% | |
| TTCAGCATAAACCCTAGTCC+TGG | - | chr1_2:71708014-71708033 | None:intergenic | 45.0% | |
| AGGGAAGGGGAAAGATTGTT+TGG | + | chr1_2:71708094-71708113 | Msa0089950:CDS | 45.0% | |
| CCACCATAAGGAAAACTAGG+TGG | - | chr1_2:71708157-71708176 | None:intergenic | 45.0% | |
| !! | CCACCTAGTTTTCCTTATGG+TGG | + | chr1_2:71708154-71708173 | Msa0089950:CDS | 45.0% |
| GGATTCTCCATACCACCATA+AGG | - | chr1_2:71708169-71708188 | None:intergenic | 45.0% | |
| ATGGTGGTATGGAGAATCCA+AGG | + | chr1_2:71708170-71708189 | Msa0089950:CDS | 45.0% | |
| TGGTATGGAGAATCCAAGGA+TGG | + | chr1_2:71708174-71708193 | Msa0089950:CDS | 45.0% | |
| TTGACCCCGACGGTTATTAA+AGG | + | chr1_2:71708202-71708221 | Msa0089950:CDS | 45.0% | |
| TGACCCCGACGGTTATTAAA+GGG | + | chr1_2:71708203-71708222 | Msa0089950:CDS | 45.0% | |
| ATCCCCTTTAATAACCGTCG+GGG | - | chr1_2:71708209-71708228 | None:intergenic | 45.0% | |
| CATCCCCTTTAATAACCGTC+GGG | - | chr1_2:71708210-71708229 | None:intergenic | 45.0% | |
| GCATCCCCTTTAATAACCGT+CGG | - | chr1_2:71708211-71708230 | None:intergenic | 45.0% | |
| ! | CTCATGAACTTGCTCATAGC+TGG | + | chr1_2:71708251-71708270 | Msa0089950:CDS | 45.0% |
| GGGAAAGTCTCCTCATATTC+TGG | + | chr1_2:71708662-71708681 | Msa0089950:intron | 45.0% | |
| TGGTTGGAGGGGTTTAAATG+AGG | + | chr1_2:71709238-71709257 | Msa0089950:CDS | 45.0% | |
| TGAGGATGTAGAGAGGTTCA+AGG | + | chr1_2:71709256-71709275 | Msa0089950:CDS | 45.0% | |
| ! | CCCTGATGATGTGTATTCTC+AGG | + | chr1_2:71709325-71709344 | Msa0089950:CDS | 45.0% |
| GTTCAATGCGCAACAAGAAC+TGG | - | chr1_2:71709370-71709389 | None:intergenic | 45.0% | |
| TGCCAGGGATGTTTGCTTTA+AGG | - | chr1_2:71709737-71709756 | None:intergenic | 45.0% | |
| TACCTTCTGTCCACAGTACA+AGG | - | chr1_2:71709776-71709795 | None:intergenic | 45.0% | |
| CTGGCAAATGAGTCGGTAAA+TGG | + | chr1_2:71709855-71709874 | Msa0089950:CDS | 45.0% | |
| CAAATGAGTCGGTAAATGGG+AGG | + | chr1_2:71709859-71709878 | Msa0089950:CDS | 45.0% | |
| TCAGCAATTTCATCCTCCCT+TGG | - | chr1_2:71709888-71709907 | None:intergenic | 45.0% | |
| GATGAAATTGCTGAGTGGCA+AGG | + | chr1_2:71709894-71709913 | Msa0089950:CDS | 45.0% | |
| ! | CAACTATGGCGGAAACAGAA+AGG | - | chr1_2:71710003-71710022 | None:intergenic | 45.0% |
| TCAACATCCTACCTAGGATC+GGG | + | chr1_2:71710037-71710056 | Msa0089950:intron | 45.0% | |
| ATCCAAACCACAATCTGCCA+TGG | - | chr1_2:71710455-71710474 | None:intergenic | 45.0% | |
| ! | TTCCCGTCTAGGATTCTTTC+TGG | + | chr1_2:71710598-71710617 | Msa0089950:intron | 45.0% |
| CACCAGAAAGAATCCTAGAC+GGG | - | chr1_2:71710603-71710622 | None:intergenic | 45.0% | |
| ! | CAGCATGGGCTATATAAAGG+AGG | - | chr1_2:71711234-71711253 | None:intergenic | 45.0% |
| ! | GAGCAGCATGGGCTATATAA+AGG | - | chr1_2:71711237-71711256 | None:intergenic | 45.0% |
| ! | TATAAAGCTCGGTGGAAGGT+TGG | + | chr1_2:71711434-71711453 | Msa0089950:intron | 45.0% |
| TATTGTGCAGGTCTTAGCCT+TGG | + | chr1_2:71711480-71711499 | Msa0089950:intron | 45.0% | |
| TTCACCAGTGCAGTGTAAAG+TGG | - | chr1_2:71711649-71711668 | None:intergenic | 45.0% | |
| CAACACCTTGAGCAATAGGA+TGG | - | chr1_2:71711738-71711757 | None:intergenic | 45.0% | |
| !!! | GGTGTTGTTGAGGCCATTTT+TGG | + | chr1_2:71711751-71711770 | Msa0089950:CDS | 45.0% |
| ATGAATCGGTTGGGATGTCA+CGG | - | chr1_2:71711954-71711973 | None:intergenic | 45.0% | |
| ! | TGACATCCCAACCGATTCAT+TGG | + | chr1_2:71711954-71711973 | Msa0089950:three_prime_UTR | 45.0% |
| GTGGAGAAGATGGGAATGAG+AGG | - | chr1_2:71707318-71707337 | None:intergenic | 50.0% | |
| GGGAAATGTGAGTGGTTGGT+GGG | - | chr1_2:71707400-71707419 | None:intergenic | 50.0% | |
| AGGGAAATGTGAGTGGTTGG+TGG | - | chr1_2:71707401-71707420 | None:intergenic | 50.0% | |
| GTGAGGGAAATGTGAGTGGT+TGG | - | chr1_2:71707404-71707423 | None:intergenic | 50.0% | |
| GAGTGTGAGGGAAATGTGAG+TGG | - | chr1_2:71707408-71707427 | None:intergenic | 50.0% | |
| ACTCTCCAAAACCCTCACTC+TGG | + | chr1_2:71707473-71707492 | Msa0089950:CDS | 50.0% | |
| ! | AAGGACCAGAGTGAGGGTTT+TGG | - | chr1_2:71707481-71707500 | None:intergenic | 50.0% |
| GGAAGAAAGGACCAGAGTGA+GGG | - | chr1_2:71707487-71707506 | None:intergenic | 50.0% | |
| AGGAAGAAAGGACCAGAGTG+AGG | - | chr1_2:71707488-71707507 | None:intergenic | 50.0% | |
| !! | GAACGAGTGTCGAGGAAGAA+AGG | - | chr1_2:71707500-71707519 | None:intergenic | 50.0% |
| ! | TTTCAAGGGAACGAGTGTCG+AGG | - | chr1_2:71707508-71707527 | None:intergenic | 50.0% |
| GGATTGAGAAGGGTCAGTGA+TGG | - | chr1_2:71707537-71707556 | None:intergenic | 50.0% | |
| !! | GGGATTGGAGTGGATTGAGA+AGG | - | chr1_2:71707548-71707567 | None:intergenic | 50.0% |
| GAGGGAAAAAGGGATTGGAG+TGG | - | chr1_2:71707558-71707577 | None:intergenic | 50.0% | |
| GGAGAGAGGGAAAAAGGGAT+TGG | - | chr1_2:71707563-71707582 | None:intergenic | 50.0% | |
| TCCAACCATCGACCCAATCA+AGG | + | chr1_2:71707580-71707599 | Msa0089950:CDS | 50.0% | |
| CCAACCATCGACCCAATCAA+GGG | + | chr1_2:71707581-71707600 | Msa0089950:CDS | 50.0% | |
| AGAACCCTTGATTGGGTCGA+TGG | - | chr1_2:71707588-71707607 | None:intergenic | 50.0% | |
| CTGAAGAGCAGAGGAAGAAG+GGG | - | chr1_2:71707666-71707685 | None:intergenic | 50.0% | |
| CACTGAAGAGCAGAGGAAGA+AGG | - | chr1_2:71707668-71707687 | None:intergenic | 50.0% | |
| CTTCTTCCTCTGCTCTTCAG+TGG | + | chr1_2:71707666-71707685 | Msa0089950:CDS | 50.0% | |
| TAAGAGCCACTGAAGAGCAG+AGG | - | chr1_2:71707675-71707694 | None:intergenic | 50.0% | |
| ! | CCGTTCTGTTTTCCCTTGTC+AGG | + | chr1_2:71707757-71707776 | Msa0089950:CDS | 50.0% |
| TCAGGACACACCAGCCATTA+GGG | + | chr1_2:71707775-71707794 | Msa0089950:CDS | 50.0% | |
| TGTGATGGCTGCAAAACACG+TGG | + | chr1_2:71707841-71707860 | Msa0089950:CDS | 50.0% | |
| TTCGTCCAAAGGTAGAGTGG+TGG | + | chr1_2:71707907-71707926 | Msa0089950:CDS | 50.0% | |
| CTCTTCCACCACTCTACCTT+TGG | - | chr1_2:71707915-71707934 | None:intergenic | 50.0% | |
| ! | TGGTGAGCTTGATAACAGGG+AGG | + | chr1_2:71707982-71708001 | Msa0089950:CDS | 50.0% |
| ! | TGAGCTTGATAACAGGGAGG+TGG | + | chr1_2:71707985-71708004 | Msa0089950:CDS | 50.0% |
| ! | GAGCTTGATAACAGGGAGGT+GGG | + | chr1_2:71707986-71708005 | Msa0089950:CDS | 50.0% |
| ! | AGCTTGATAACAGGGAGGTG+GGG | + | chr1_2:71707987-71708006 | Msa0089950:CDS | 50.0% |
| GCAGCTGAATCCAACAGTTG+AGG | - | chr1_2:71708043-71708062 | None:intergenic | 50.0% | |
| GGGGTCAAAAACACCATCCT+TGG | - | chr1_2:71708190-71708209 | None:intergenic | 50.0% | |
| !! | GATGGTGTTTTTGACCCCGA+CGG | + | chr1_2:71708192-71708211 | Msa0089950:CDS | 50.0% |
| GACCCCGACGGTTATTAAAG+GGG | + | chr1_2:71708204-71708223 | Msa0089950:CDS | 50.0% | |
| ! | GAACTTGCTCATAGCTGGAC+TGG | + | chr1_2:71708256-71708275 | Msa0089950:CDS | 50.0% |
| TCACTACTTATGCAGAGCGG+AGG | + | chr1_2:71709165-71709184 | Msa0089950:CDS | 50.0% | |
| TTATGCAGAGCGGAGGATTG+TGG | + | chr1_2:71709172-71709191 | Msa0089950:CDS | 50.0% | |
| AGGATTGTGGAGGCTGTACA+AGG | + | chr1_2:71709185-71709204 | Msa0089950:CDS | 50.0% | |
| CATCAGGGTCAATTCCTTCC+TGG | - | chr1_2:71709313-71709332 | None:intergenic | 50.0% | |
| CTTGTTGCGCATTGAACGTG+AGG | + | chr1_2:71709373-71709392 | Msa0089950:CDS | 50.0% | |
| GACCTTGTACTGTGGACAGA+AGG | + | chr1_2:71709771-71709790 | Msa0089950:CDS | 50.0% | |
| ! | GTACTGTGGACAGAAGGTAC+TGG | + | chr1_2:71709777-71709796 | Msa0089950:CDS | 50.0% |
| !! | CGGGCTCAAAAGCATCAGAT+GGG | - | chr1_2:71709806-71709825 | None:intergenic | 50.0% |
| !! | TCGGGCTCAAAAGCATCAGA+TGG | - | chr1_2:71709807-71709826 | None:intergenic | 50.0% |
| GGTAAATGGGAGGATGCCAA+GGG | + | chr1_2:71709869-71709888 | Msa0089950:CDS | 50.0% | |
| GGGAGGATGAAATTGCTGAG+TGG | + | chr1_2:71709889-71709908 | Msa0089950:CDS | 50.0% | |
| AATTGCTGAGTGGCAAGGTC+AGG | + | chr1_2:71709899-71709918 | Msa0089950:CDS | 50.0% | |
| CAACATCCTACCTAGGATCG+GGG | + | chr1_2:71710038-71710057 | Msa0089950:intron | 50.0% | |
| ! | CTCATAACGAGTTGGACCGT+AGG | - | chr1_2:71710135-71710154 | None:intergenic | 50.0% |
| CTACGGTCCAACTCGTTATG+AGG | + | chr1_2:71710133-71710152 | Msa0089950:intron | 50.0% | |
| ATAGCAGCCATGGCAGATTG+TGG | + | chr1_2:71710445-71710464 | Msa0089950:intron | 50.0% | |
| AGCCATGGCAGATTGTGGTT+TGG | + | chr1_2:71710450-71710469 | Msa0089950:intron | 50.0% | |
| !!! | CGATTTTGGATAGTGGGCCA+TGG | - | chr1_2:71710569-71710588 | None:intergenic | 50.0% |
| CGATAAGACTGTTCCCGTCT+AGG | + | chr1_2:71710587-71710606 | Msa0089950:intron | 50.0% | |
| !! | CTCCAACGGGCTATTTCATG+CGG | + | chr1_2:71711556-71711575 | Msa0089950:CDS | 50.0% |
| ATCCGCATGAAATAGCCCGT+TGG | - | chr1_2:71711561-71711580 | None:intergenic | 50.0% | |
| CCAGTGCAGTGTAAAGTGGA+CGG | - | chr1_2:71711645-71711664 | None:intergenic | 50.0% | |
| ! | ACTGCACTGGTGAAAGACAG+TGG | + | chr1_2:71711655-71711674 | Msa0089950:CDS | 50.0% |
| TGAATCGGTTGGGATGTCAC+GGG | - | chr1_2:71711953-71711972 | None:intergenic | 50.0% | |
| ! | GAGAAGGGTCAGTGATGGAG+TGG | - | chr1_2:71707532-71707551 | None:intergenic | 55.0% |
| TGGGTCGATGGTTGGAGAGA+GGG | - | chr1_2:71707576-71707595 | None:intergenic | 55.0% | |
| TTGGGTCGATGGTTGGAGAG+AGG | - | chr1_2:71707577-71707596 | None:intergenic | 55.0% | |
| CCCTTGATTGGGTCGATGGT+TGG | - | chr1_2:71707584-71707603 | None:intergenic | 55.0% | |
| AAGAGCAGAGGAAGAAGGGG+AGG | - | chr1_2:71707663-71707682 | None:intergenic | 55.0% | |
| TGGCTGGTGTGTCCTGACAA+GGG | - | chr1_2:71707772-71707791 | None:intergenic | 55.0% | |
| ATGGCTGGTGTGTCCTGACA+AGG | - | chr1_2:71707773-71707792 | None:intergenic | 55.0% | |
| GTCAGGACACACCAGCCATT+AGG | + | chr1_2:71707774-71707793 | Msa0089950:CDS | 55.0% | |
| TGAAGCTGCGCCTCAACTGT+TGG | + | chr1_2:71708030-71708049 | Msa0089950:CDS | 55.0% | |
| ATGAGCCACAACCTGTGCAC+CGG | - | chr1_2:71708236-71708255 | None:intergenic | 55.0% | |
| CGGTAAATGGGAGGATGCCA+AGG | + | chr1_2:71709868-71709887 | Msa0089950:CDS | 55.0% | |
| AAATGGGAGGATGCCAAGGG+AGG | + | chr1_2:71709872-71709891 | Msa0089950:CDS | 55.0% | |
| TGAGTGGCAAGGTCAGGAGT+GGG | + | chr1_2:71709905-71709924 | Msa0089950:CDS | 55.0% | |
| TCAGGAGTGGGAGCTCTACT+TGG | + | chr1_2:71709917-71709936 | Msa0089950:CDS | 55.0% | |
| ATCCTACCTAGGATCGGGGA+GGG | + | chr1_2:71710042-71710061 | Msa0089950:intron | 55.0% | |
| ! | AAAGCTCGGTGGAAGGTTGG+CGG | + | chr1_2:71711437-71711456 | Msa0089950:intron | 55.0% |
| CCGTCCACTTTACACTGCAC+TGG | + | chr1_2:71711642-71711661 | Msa0089950:CDS | 55.0% | |
| AGCAGAGGAAGAAGGGGAGG+TGG | - | chr1_2:71707660-71707679 | None:intergenic | 60.0% | |
| TGCAACCGGTGCACAGGTTG+TGG | + | chr1_2:71708228-71708247 | Msa0089950:CDS | 60.0% | |
| TGCAGAGCGGAGGATTGTGG+AGG | + | chr1_2:71709175-71709194 | Msa0089950:CDS | 60.0% | |
| CTGAGTGGCAAGGTCAGGAG+TGG | + | chr1_2:71709904-71709923 | Msa0089950:CDS | 60.0% | |
| CATCCTACCTAGGATCGGGG+AGG | + | chr1_2:71710041-71710060 | Msa0089950:intron | 60.0% | |
| TCCTACCTAGGATCGGGGAG+GGG | + | chr1_2:71710043-71710062 | Msa0089950:intron | 60.0% | |
| ATCGGTTGGGATGTCACGGG+AGG | - | chr1_2:71711950-71711969 | None:intergenic | 60.0% | |
| CGTGGTGCGTCGCGAATCGT+TGG | + | chr1_2:71707859-71707878 | Msa0089950:CDS | 65.0% | |
| ATAACAGGGAGGTGGGGCCC+AGG | + | chr1_2:71707993-71708012 | Msa0089950:CDS | 65.0% | |
| AGGGGATGCAACCGGTGCAC+AGG | + | chr1_2:71708222-71708241 | Msa0089950:CDS | 65.0% | |
| CCTACCTAGGATCGGGGAGG+GGG | + | chr1_2:71710044-71710063 | Msa0089950:intron | 65.0% | |
| GGAGGTGGGGCCCAGGACTA+GGG | + | chr1_2:71708000-71708019 | Msa0089950:CDS | 70.0% | |
| CCCCCTCCCCGATCCTAGGT+AGG | - | chr1_2:71710047-71710066 | None:intergenic | 70.0% | |
| GCAACCCCCTCCCCGATCCT+AGG | - | chr1_2:71710051-71710070 | None:intergenic | 70.0% | |
| GGGAGGTGGGGCCCAGGACT+AGG | + | chr1_2:71707999-71708018 | Msa0089950:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 71707250 | 71712061 | 71707250 | ID=Msa0089950;Name=Msa0089950 |
| chr1_2 | mRNA | 71707250 | 71712061 | 71707250 | ID=Msa0089950-mRNA-1;Parent=Msa0089950;Name=Msa0089950-mRNA-1;_AED=0.20;_eAED=0.20;_QI=106|1|1|1|1|1|4|275|608 |
| chr1_2 | exon | 71707250 | 71708324 | 71707250 | ID=Msa0089950-mRNA-1:exon:24734;Parent=Msa0089950-mRNA-1 |
| chr1_2 | exon | 71709161 | 71709394 | 71709161 | ID=Msa0089950-mRNA-1:exon:24735;Parent=Msa0089950-mRNA-1 |
| chr1_2 | exon | 71709645 | 71709971 | 71709645 | ID=Msa0089950-mRNA-1:exon:24736;Parent=Msa0089950-mRNA-1 |
| chr1_2 | exon | 71711490 | 71712061 | 71711490 | ID=Msa0089950-mRNA-1:exon:24737;Parent=Msa0089950-mRNA-1 |
| chr1_2 | five_prime_UTR | 71707250 | 71707355 | 71707250 | ID=Msa0089950-mRNA-1:five_prime_utr;Parent=Msa0089950-mRNA-1 |
| chr1_2 | CDS | 71707356 | 71708324 | 71707356 | ID=Msa0089950-mRNA-1:cds;Parent=Msa0089950-mRNA-1 |
| chr1_2 | CDS | 71709161 | 71709394 | 71709161 | ID=Msa0089950-mRNA-1:cds;Parent=Msa0089950-mRNA-1 |
| chr1_2 | CDS | 71709645 | 71709971 | 71709645 | ID=Msa0089950-mRNA-1:cds;Parent=Msa0089950-mRNA-1 |
| chr1_2 | CDS | 71711490 | 71711786 | 71711490 | ID=Msa0089950-mRNA-1:cds;Parent=Msa0089950-mRNA-1 |
| chr1_2 | three_prime_UTR | 71711787 | 71712061 | 71711787 | ID=Msa0089950-mRNA-1:three_prime_utr;Parent=Msa0089950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
