Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324830 | XP_003595480.2 | 29.121 | 182 | 122 | 5 | 3 | 178 | 504 | 684 | 5.58e-11 | 73.2 |
| Msa0324830 | XP_003595480.2 | 30.159 | 189 | 114 | 4 | 1 | 179 | 600 | 780 | 3.27e-12 | 76.6 |
| Msa0324830 | XP_003595480.2 | 95.588 | 204 | 9 | 0 | 1 | 204 | 989 | 1192 | 1.35e-129 | 410 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324830 | sp|F4IIU4|AIR9_ARATH | 63.000 | 200 | 73 | 1 | 2 | 200 | 1036 | 1235 | 2.64e-82 | 269 |
| Msa0324830 | sp|F4IIU4|AIR9_ARATH | 29.891 | 184 | 122 | 4 | 1 | 178 | 546 | 728 | 2.34e-16 | 80.1 |
| Msa0324830 | sp|F4IIU4|AIR9_ARATH | 31.868 | 182 | 118 | 5 | 2 | 179 | 645 | 824 | 3.22e-12 | 68.2 |
| Msa0324830 | sp|F4IIU4|AIR9_ARATH | 28.333 | 180 | 119 | 5 | 8 | 180 | 946 | 1122 | 6.37e-12 | 67.4 |
| Msa0324830 | sp|F4IIU4|AIR9_ARATH | 28.571 | 182 | 119 | 7 | 7 | 179 | 846 | 1025 | 9.38e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025160 | Msa0324830 | 0.824328 | 8.568905e-54 | -8.615850e-47 |
| Msa0072520 | Msa0324830 | 0.811001 | 8.708271e-51 | -8.615850e-47 |
| Msa0089950 | Msa0324830 | 0.805307 | 1.421903e-49 | -8.615850e-47 |
| Msa0161930 | Msa0324830 | 0.809142 | 2.189773e-50 | -8.615850e-47 |
| Msa0205210 | Msa0324830 | 0.871797 | 5.198014e-67 | -8.615850e-47 |
| Msa0248100 | Msa0324830 | 0.829720 | 4.394605e-55 | -8.615850e-47 |
| Msa0286620 | Msa0324830 | 0.810504 | 1.115487e-50 | -8.615850e-47 |
| Msa0324830 | Msa0401970 | 0.813616 | 2.338591e-51 | -8.615850e-47 |
| Msa0324830 | Msa0413170 | 0.800628 | 1.318168e-48 | -8.615850e-47 |
| Msa0324830 | Msa0504720 | 0.817214 | 3.703116e-52 | -8.615850e-47 |
| Msa0324830 | Msa0570010 | 0.801374 | 9.280441e-49 | -8.615850e-47 |
| Msa0324830 | Msa0607800 | 0.801387 | 9.221404e-49 | -8.615850e-47 |
| Msa0324830 | Msa0615630 | 0.807450 | 5.025868e-50 | -8.615850e-47 |
| Msa0324830 | Msa0648040 | 0.800977 | 1.119017e-48 | -8.615850e-47 |
| Msa0324830 | Msa0687090 | 0.820937 | 5.267889e-53 | -8.615850e-47 |
| Msa0324830 | Msa0690740 | 0.806074 | 9.813484e-50 | -8.615850e-47 |
| Msa0324830 | Msa0698730 | 0.818739 | 1.674856e-52 | -8.615850e-47 |
| Msa0324830 | Msa0706150 | 0.800465 | 1.423050e-48 | -8.615850e-47 |
| Msa0324830 | Msa0837460 | 0.806060 | 9.882189e-50 | -8.615850e-47 |
| Msa0324830 | Msa1002640 | 0.804352 | 2.251257e-49 | -8.615850e-47 |
| Msa0324830 | Msa1031410 | 0.811221 | 7.804680e-51 | -8.615850e-47 |
| Msa0324830 | Msa1042190 | 0.800867 | 1.178207e-48 | -8.615850e-47 |
| Msa0324830 | Msa1078880 | 0.804751 | 1.858690e-49 | -8.615850e-47 |
| Msa0324830 | Msa1078970 | 0.804991 | 1.655711e-49 | -8.615850e-47 |
| Msa0324830 | Msa1081690 | 0.802219 | 6.224145e-49 | -8.615850e-47 |
| Msa0324830 | Msa1167470 | 0.809446 | 1.884270e-50 | -8.615850e-47 |
| Msa0324830 | Msa1169190 | 0.808909 | 2.455969e-50 | -8.615850e-47 |
| Msa0324830 | Msa1174670 | 0.801148 | 1.032193e-48 | -8.615850e-47 |
| Msa0324830 | Msa1190390 | 0.804537 | 2.060208e-49 | -8.615850e-47 |
| Msa0324830 | Msa1234870 | 0.827593 | 1.435958e-54 | -8.615850e-47 |
| Msa0324830 | Msa1240770 | 0.805875 | 1.080948e-49 | -8.615850e-47 |
| Msa0324830 | Msa1263740 | 0.807468 | 4.979968e-50 | -8.615850e-47 |
| Msa0324830 | Msa1263780 | 0.817612 | 3.012775e-52 | -8.615850e-47 |
| Msa0324830 | Msa1315130 | 0.802382 | 5.761437e-49 | -8.615850e-47 |
| Msa0324830 | Msa1315160 | 0.805012 | 1.638929e-49 | -8.615850e-47 |
| Msa0324830 | Msa1339170 | 0.808534 | 2.954596e-50 | -8.615850e-47 |
| Msa0324830 | Msa1381030 | 0.807712 | 4.419996e-50 | -8.615850e-47 |
| Msa0324830 | Msa1409410 | 0.803856 | 2.855407e-49 | -8.615850e-47 |
| Msa0324830 | Msa1440430 | 0.804736 | 1.872251e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324830 | MtrunA17_Chr2g0303451 | 95.588 | 204 | 9 | 0 | 1 | 204 | 989 | 1192 | 1.24e-133 | 410 |
| Msa0324830 | MtrunA17_Chr2g0303451 | 30.159 | 189 | 114 | 4 | 1 | 179 | 600 | 780 | 3.00e-16 | 76.6 |
| Msa0324830 | MtrunA17_Chr2g0303451 | 29.121 | 182 | 122 | 5 | 3 | 178 | 504 | 684 | 5.14e-15 | 73.2 |
| Msa0324830 | MtrunA17_Chr2g0303451 | 29.282 | 181 | 116 | 5 | 8 | 180 | 900 | 1076 | 1.85e-13 | 68.6 |
| Msa0324830 | MtrunA17_Chr8g0360651 | 26.115 | 157 | 110 | 4 | 2 | 156 | 54 | 206 | 8.95e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324830 | AT2G34680.2 | 63.000 | 200 | 73 | 1 | 2 | 200 | 1096 | 1295 | 2.18e-83 | 270 |
| Msa0324830 | AT2G34680.2 | 29.891 | 184 | 122 | 4 | 1 | 178 | 606 | 788 | 2.04e-17 | 80.5 |
| Msa0324830 | AT2G34680.2 | 31.868 | 182 | 118 | 5 | 2 | 179 | 705 | 884 | 3.04e-13 | 68.2 |
| Msa0324830 | AT2G34680.2 | 28.333 | 180 | 119 | 5 | 8 | 180 | 1006 | 1182 | 5.42e-13 | 67.8 |
| Msa0324830 | AT2G34680.2 | 28.571 | 182 | 119 | 7 | 7 | 179 | 906 | 1085 | 8.38e-12 | 64.3 |
| Msa0324830 | AT2G34680.1 | 63.000 | 200 | 73 | 1 | 2 | 200 | 1036 | 1235 | 2.68e-83 | 269 |
| Msa0324830 | AT2G34680.1 | 29.891 | 184 | 122 | 4 | 1 | 178 | 546 | 728 | 2.38e-17 | 80.1 |
| Msa0324830 | AT2G34680.1 | 31.868 | 182 | 118 | 5 | 2 | 179 | 645 | 824 | 3.27e-13 | 68.2 |
| Msa0324830 | AT2G34680.1 | 28.333 | 180 | 119 | 5 | 8 | 180 | 946 | 1122 | 6.48e-13 | 67.4 |
| Msa0324830 | AT2G34680.1 | 28.571 | 182 | 119 | 7 | 7 | 179 | 846 | 1025 | 9.54e-12 | 63.9 |
Find 67 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCCCAATGAAGATATATTT+TGG | 0.214404 | 2_4:+30765749 | Msa0324830:CDS |
| ACATCAGATACCACATTCTT+TGG | 0.233649 | 2_4:-30764479 | None:intergenic |
| AAGGAGTTGGAGAATATATT+TGG | 0.245564 | 2_4:+30765780 | Msa0324830:CDS |
| AATGCACCCACGAGTGGTTT+AGG | 0.258364 | 2_4:+30763479 | Msa0324830:CDS |
| ATGCCCTCAATTGATGATAT+TGG | 0.280397 | 2_4:+30763047 | Msa0324830:CDS |
| AACTTTAATGCTGTGTATAC+TGG | 0.288342 | 2_4:+30763332 | Msa0324830:CDS |
| TGGTGTCCAAAGTGAAATTA+TGG | 0.300807 | 2_4:+30763004 | Msa0324830:exon |
| ATTGTTCTCTCTGAACAAAT+TGG | 0.339883 | 2_4:+30763125 | Msa0324830:CDS |
| CCACCAAAATATATCTTCAT+TGG | 0.355429 | 2_4:-30765752 | None:intergenic |
| CACCAAAATATATCTTCATT+GGG | 0.367205 | 2_4:-30765751 | None:intergenic |
| TGATCAGTACCAGGTATTAT+AGG | 0.385950 | 2_4:-30763149 | None:intergenic |
| GTGAGCCTGTCCGAAGTGAT+TGG | 0.389253 | 2_4:+30763090 | Msa0324830:CDS |
| CTTCAAGCTTAATCTTTGTT+CGG | 0.412844 | 2_4:-30765805 | None:intergenic |
| TGCCTGTCTTCGCAACAGTC+AGG | 0.418753 | 2_4:-30765722 | None:intergenic |
| ACTTTGGACACCATCACAAC+TGG | 0.419685 | 2_4:-30762994 | None:intergenic |
| ATGCACCCACGAGTGGTTTA+GGG | 0.426097 | 2_4:+30763480 | Msa0324830:CDS |
| TTTGGTGGACATGAAGGAGT+TGG | 0.429562 | 2_4:+30765767 | Msa0324830:CDS |
| TCCCTGACTGTTGCGAAGAC+AGG | 0.429575 | 2_4:+30765720 | Msa0324830:CDS |
| GCGCTACTAAATATATCTAA+TGG | 0.432307 | 2_4:+30765833 | Msa0324830:CDS |
| GTGGACTAACATATTACCTA+TGG | 0.438433 | 2_4:+30762960 | None:intergenic |
| ATTCGTGGATCAATGATAGA+AGG | 0.453624 | 2_4:+30763299 | Msa0324830:CDS |
| CATCAGATACCACATTCTTT+GGG | 0.454827 | 2_4:-30764478 | None:intergenic |
| CGAACAAAGATTAAGCTTGA+AGG | 0.457752 | 2_4:+30765806 | Msa0324830:CDS |
| TGAGCCTGTCCGAAGTGATT+GGG | 0.471269 | 2_4:+30763091 | Msa0324830:CDS |
| GCCCTGCCTTTCAGGGAGAA+AGG | 0.485940 | 2_4:+30763454 | Msa0324830:intron |
| GAAACCAATATCATCAATTG+AGG | 0.492684 | 2_4:-30763051 | None:intergenic |
| TCTGTGCTCAGCGGATCCTA+AGG | 0.494408 | 2_4:+30765682 | Msa0324830:intron |
| ATTTGTTCAGAGAGAACAAT+GGG | 0.500954 | 2_4:-30763122 | None:intergenic |
| GTATCTGATGTGATTTCTCC+TGG | 0.504129 | 2_4:+30764491 | Msa0324830:CDS |
| GTCCGAAGTGATTGGGCTCG+TGG | 0.505278 | 2_4:+30763098 | Msa0324830:CDS |
| TACACACCTGTGTGCAAAGA+TGG | 0.508609 | 2_4:+30764443 | Msa0324830:CDS |
| ATTATGAGCTCCATTCCCTT+AGG | 0.511993 | 2_4:-30765698 | None:intergenic |
| GGTGTCCAAAGTGAAATTAT+GGG | 0.522609 | 2_4:+30763005 | Msa0324830:exon |
| TTTGTACCCTAAACCACTCG+TGG | 0.527110 | 2_4:-30763486 | None:intergenic |
| TCCACCAACTTGTCATACTC+TGG | 0.533350 | 2_4:+30763274 | Msa0324830:CDS |
| CAAATTGGACCTATAATACC+TGG | 0.545409 | 2_4:+30763140 | Msa0324830:CDS |
| GCCTGTCTTCGCAACAGTCA+GGG | 0.545547 | 2_4:-30765721 | None:intergenic |
| GTGTGCAAAGATGGAACTAA+AGG | 0.545809 | 2_4:+30764452 | Msa0324830:CDS |
| GGTTCTGACATTGTGATATG+TGG | 0.548842 | 2_4:+30765854 | Msa0324830:CDS |
| TGTCATACTCTGGAAATTCG+TGG | 0.549080 | 2_4:+30763284 | Msa0324830:CDS |
| CTCAGCGGATCCTAAGGGAA+TGG | 0.558518 | 2_4:+30765688 | Msa0324830:intron |
| TGACTGTTGCGAAGACAGGC+AGG | 0.558595 | 2_4:+30765724 | Msa0324830:CDS |
| TGTGTAGACAAGTTCAATGC+AGG | 0.561162 | 2_4:-30764426 | None:intergenic |
| CGAAAGAAAATAAGTAGTCA+AGG | 0.565724 | 2_4:+30763520 | Msa0324830:CDS |
| TCCAGAGTATGACAAGTTGG+TGG | 0.567919 | 2_4:-30763275 | None:intergenic |
| TTTATGTAGACCAGTTGTGA+TGG | 0.582583 | 2_4:+30762984 | Msa0324830:five_prime_UTR |
| TTTAATGCTGTGTATACTGG+AGG | 0.588934 | 2_4:+30763335 | Msa0324830:CDS |
| AAACCAATATCATCAATTGA+GGG | 0.591511 | 2_4:-30763050 | None:intergenic |
| CGAGCCCAATCACTTCGGAC+AGG | 0.594372 | 2_4:-30763095 | None:intergenic |
| ATTTCCAGAGTATGACAAGT+TGG | 0.596744 | 2_4:-30763278 | None:intergenic |
| CTGTGCTCAGCGGATCCTAA+GGG | 0.598465 | 2_4:+30765683 | Msa0324830:intron |
| GTGTCCAAAGTGAAATTATG+GGG | 0.602812 | 2_4:+30763006 | Msa0324830:exon |
| TTAGTTCCATCTTTGCACAC+AGG | 0.607012 | 2_4:-30764449 | None:intergenic |
| GATTTGACTCTTGACGATGT+TGG | 0.610457 | 2_4:+30764401 | Msa0324830:CDS |
| ACTGGTCTACATAAAGCCAT+AGG | 0.617515 | 2_4:-30762976 | None:intergenic |
| AAGGAGAATGCACCCACGAG+TGG | 0.618121 | 2_4:+30763473 | Msa0324830:CDS |
| TTGTACCCTAAACCACTCGT+GGG | 0.623847 | 2_4:-30763485 | None:intergenic |
| TAAAGGCAGCCCAAAGAATG+TGG | 0.625876 | 2_4:+30764469 | Msa0324830:CDS |
| TTAATGCTGTGTATACTGGA+GGG | 0.634706 | 2_4:+30763336 | Msa0324830:CDS |
| GTCCACGAGCCCAATCACTT+CGG | 0.644264 | 2_4:-30763100 | None:intergenic |
| ACCAAAATATATCTTCATTG+GGG | 0.645262 | 2_4:-30765750 | None:intergenic |
| GGGCATATATGATGCTGTGG+TGG | 0.652607 | 2_4:-30763030 | None:intergenic |
| GTTCTGACATTGTGATATGT+GGG | 0.657644 | 2_4:+30765855 | Msa0324830:CDS |
| TGGTTTAGGGTACAAAACAA+TGG | 0.673067 | 2_4:+30763493 | Msa0324830:CDS |
| TGAGGGCATATATGATGCTG+TGG | 0.686007 | 2_4:-30763033 | None:intergenic |
| AATTTGTTCAGAGAGAACAA+TGG | 0.695975 | 2_4:-30763123 | None:intergenic |
| TGTCCAAAGTGAAATTATGG+GGG | 0.723771 | 2_4:+30763007 | Msa0324830:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATATTTGAAAGTAATTTT+TGG | + | chr2_4:30763644-30763663 | Msa0324830:intron | 10.0% |
| !! | AGTGTAATAATTATATAATA+AGG | + | chr2_4:30763831-30763850 | Msa0324830:intron | 10.0% |
| !!! | AAAACAATTGTTTAATATTT+TGG | + | chr2_4:30764224-30764243 | Msa0324830:intron | 10.0% |
| !! | AAAATTAATTGTTAATTGAA+TGG | + | chr2_4:30764660-30764679 | Msa0324830:intron | 10.0% |
| !! | AAATTAATTGTTAATTGAAT+GGG | + | chr2_4:30764661-30764680 | Msa0324830:intron | 10.0% |
| !! | AAAAACAAATAATTACATTA+GGG | - | chr2_4:30765657-30765676 | None:intergenic | 10.0% |
| !! | AAAAAACAAATAATTACATT+AGG | - | chr2_4:30765658-30765677 | None:intergenic | 10.0% |
| !! | AGACATTAATTTATAAACAT+TGG | - | chr2_4:30763377-30763396 | None:intergenic | 15.0% |
| !!! | AATTGTTTTGTTTTATAAAC+AGG | - | chr2_4:30764213-30764232 | None:intergenic | 15.0% |
| !!! | ATAATGAATTTTATGTAACA+TGG | + | chr2_4:30764544-30764563 | Msa0324830:intron | 15.0% |
| !! | TAAAGTATATATTCAAACTT+TGG | - | chr2_4:30764632-30764651 | None:intergenic | 15.0% |
| !!! | TACATTTTGTAATTTGAAAA+TGG | - | chr2_4:30764806-30764825 | None:intergenic | 15.0% |
| !! | TTAATTCTCCATTTAATTAA+GGG | - | chr2_4:30765117-30765136 | None:intergenic | 15.0% |
| !! | TTTAATTCTCCATTTAATTA+AGG | - | chr2_4:30765118-30765137 | None:intergenic | 15.0% |
| !! | TGACAAAATATTATTAGAAT+GGG | - | chr2_4:30765621-30765640 | None:intergenic | 15.0% |
| !! | ATGACAAAATATTATTAGAA+TGG | - | chr2_4:30765622-30765641 | None:intergenic | 15.0% |
| !!! | TTTAAAATGTTCATGTAGAA+TGG | + | chr2_4:30763201-30763220 | Msa0324830:intron | 20.0% |
| !!! | AAAAAAGGGTCTTATAAATA+GGG | - | chr2_4:30763585-30763604 | None:intergenic | 20.0% |
| !!! | ATTCTTGTGATTTTATCAAA+AGG | + | chr2_4:30763717-30763736 | Msa0324830:intron | 20.0% |
| !!! | TTCTTGTGATTTTATCAAAA+GGG | + | chr2_4:30763718-30763737 | Msa0324830:intron | 20.0% |
| !! | GCATTTATAAATTATGATCA+AGG | - | chr2_4:30764009-30764028 | None:intergenic | 20.0% |
| !!! | ATTACACTGTTTTTTTTTTG+AGG | + | chr2_4:30764158-30764177 | Msa0324830:intron | 20.0% |
| !!! | TTACACTGTTTTTTTTTTGA+GGG | + | chr2_4:30764159-30764178 | Msa0324830:intron | 20.0% |
| !!! | TAAGTAATGAAGATGTTTTT+TGG | - | chr2_4:30764698-30764717 | None:intergenic | 20.0% |
| !! | TGAAAATGGTCTAATAAAAA+GGG | - | chr2_4:30764792-30764811 | None:intergenic | 20.0% |
| !! | TTGAAAATGGTCTAATAAAA+AGG | - | chr2_4:30764793-30764812 | None:intergenic | 20.0% |
| !! | TAAAATATAATCAAGATTCC+AGG | - | chr2_4:30765319-30765338 | None:intergenic | 20.0% |
| ! | AAACCAATATCATCAATTGA+GGG | - | chr2_4:30763053-30763072 | None:intergenic | 25.0% |
| !!! | TACATGAACATTTTAAAGCT+GGG | - | chr2_4:30763198-30763217 | None:intergenic | 25.0% |
| !! | CAAAAAAGGGTCTTATAAAT+AGG | - | chr2_4:30763586-30763605 | None:intergenic | 25.0% |
| !! | TTACCCTATTTTCGTTTAAA+CGG | + | chr2_4:30764029-30764048 | Msa0324830:intron | 25.0% |
| !!! | TACACTGTTTTTTTTTTGAG+GGG | + | chr2_4:30764160-30764179 | Msa0324830:intron | 25.0% |
| ! | GAAGATATGAGTAGTAATTA+TGG | - | chr2_4:30764876-30764895 | None:intergenic | 25.0% |
| !! | AGCTTAAGTACATTGATTAT+TGG | - | chr2_4:30764952-30764971 | None:intergenic | 25.0% |
| ! | CAACAATACCCTTAATTAAA+TGG | + | chr2_4:30765106-30765125 | Msa0324830:intron | 25.0% |
| ! | ATCCATTAACCAAGATATAT+CGG | - | chr2_4:30765439-30765458 | None:intergenic | 25.0% |
| !!! | GATCATTTTATTTATTGCAC+TGG | + | chr2_4:30765456-30765475 | Msa0324830:intron | 25.0% |
| !!! | TTTATTTATTGCACTGGTTA+AGG | + | chr2_4:30765462-30765481 | Msa0324830:intron | 25.0% |
| !!! | TGATTTAAAGTTTCCACTTT+TGG | - | chr2_4:30765491-30765510 | None:intergenic | 25.0% |
| !! | AGTATTTTGCATTGAAAGTT+GGG | - | chr2_4:30765550-30765569 | None:intergenic | 25.0% |
| !! | TAGTATTTTGCATTGAAAGT+TGG | - | chr2_4:30765551-30765570 | None:intergenic | 25.0% |
| ! | ACCAAAATATATCTTCATTG+GGG | - | chr2_4:30765753-30765772 | None:intergenic | 25.0% |
| ! | CACCAAAATATATCTTCATT+GGG | - | chr2_4:30765754-30765773 | None:intergenic | 25.0% |
| GAAACCAATATCATCAATTG+AGG | - | chr2_4:30763054-30763073 | None:intergenic | 30.0% | |
| ATTTGTTCAGAGAGAACAAT+GGG | - | chr2_4:30763125-30763144 | None:intergenic | 30.0% | |
| ! | AATTTGTTCAGAGAGAACAA+TGG | - | chr2_4:30763126-30763145 | None:intergenic | 30.0% |
| ATTGTTCTCTCTGAACAAAT+TGG | + | chr2_4:30763125-30763144 | Msa0324830:CDS | 30.0% | |
| !!! | CTACATGAACATTTTAAAGC+TGG | - | chr2_4:30763199-30763218 | None:intergenic | 30.0% |
| AACTTTAATGCTGTGTATAC+TGG | + | chr2_4:30763332-30763351 | Msa0324830:CDS | 30.0% | |
| CGAAAGAAAATAAGTAGTCA+AGG | + | chr2_4:30763520-30763539 | Msa0324830:CDS | 30.0% | |
| CAAAAAGGGACAACAAAAAA+GGG | - | chr2_4:30763599-30763618 | None:intergenic | 30.0% | |
| ACAAAAAGGGACAACAAAAA+AGG | - | chr2_4:30763600-30763619 | None:intergenic | 30.0% | |
| TTAAGAGAGAGATTTGAAGA+GGG | - | chr2_4:30763627-30763646 | None:intergenic | 30.0% | |
| ATTAAGAGAGAGATTTGAAG+AGG | - | chr2_4:30763628-30763647 | None:intergenic | 30.0% | |
| ! | ATCAAAAGGGTCTTATGTAT+AGG | + | chr2_4:30763731-30763750 | Msa0324830:intron | 30.0% |
| ! | TCAAAAGGGTCTTATGTATA+GGG | + | chr2_4:30763732-30763751 | Msa0324830:intron | 30.0% |
| ATTGCAACTCAGATGATAAA+AGG | - | chr2_4:30764108-30764127 | None:intergenic | 30.0% | |
| TATCATCTGAGTTGCAATTA+TGG | + | chr2_4:30764110-30764129 | Msa0324830:intron | 30.0% | |
| ATCATCTGAGTTGCAATTAT+GGG | + | chr2_4:30764111-30764130 | Msa0324830:intron | 30.0% | |
| ! | TTTGTGAATAGCAGACTTTT+TGG | + | chr2_4:30764379-30764398 | Msa0324830:intron | 30.0% |
| ATGCATAAAACATTCTTACC+AGG | - | chr2_4:30764512-30764531 | None:intergenic | 30.0% | |
| !!! | TGAAGATGTTTTTTGGTCAA+AGG | - | chr2_4:30764691-30764710 | None:intergenic | 30.0% |
| ! | GGGACGATAAAATTTTACAA+GGG | - | chr2_4:30764772-30764791 | None:intergenic | 30.0% |
| ! | AGGGACGATAAAATTTTACA+AGG | - | chr2_4:30764773-30764792 | None:intergenic | 30.0% |
| ! | TCTCAGTTGAAGGATAATTT+TGG | + | chr2_4:30765169-30765188 | Msa0324830:intron | 30.0% |
| GGAAAAAGAATCTACATTCT+TGG | + | chr2_4:30765190-30765209 | Msa0324830:intron | 30.0% | |
| TCAATGAAGTCTTACATGTA+GGG | + | chr2_4:30765257-30765276 | Msa0324830:intron | 30.0% | |
| ! | ACCCCAATGAAGATATATTT+TGG | + | chr2_4:30765749-30765768 | Msa0324830:CDS | 30.0% |
| CCACCAAAATATATCTTCAT+TGG | - | chr2_4:30765755-30765774 | None:intergenic | 30.0% | |
| !! | CCAATGAAGATATATTTTGG+TGG | + | chr2_4:30765752-30765771 | Msa0324830:CDS | 30.0% |
| !!! | ATATATTTTGGTGGACATGA+AGG | + | chr2_4:30765761-30765780 | Msa0324830:CDS | 30.0% |
| AAGGAGTTGGAGAATATATT+TGG | + | chr2_4:30765780-30765799 | Msa0324830:CDS | 30.0% | |
| CTTCAAGCTTAATCTTTGTT+CGG | - | chr2_4:30765808-30765827 | None:intergenic | 30.0% | |
| GCGCTACTAAATATATCTAA+TGG | + | chr2_4:30765833-30765852 | Msa0324830:CDS | 30.0% | |
| TTTATGTAGACCAGTTGTGA+TGG | + | chr2_4:30762984-30763003 | Msa0324830:five_prime_UTR | 35.0% | |
| TGGTGTCCAAAGTGAAATTA+TGG | + | chr2_4:30763004-30763023 | Msa0324830:exon | 35.0% | |
| GGTGTCCAAAGTGAAATTAT+GGG | + | chr2_4:30763005-30763024 | Msa0324830:exon | 35.0% | |
| GTGTCCAAAGTGAAATTATG+GGG | + | chr2_4:30763006-30763025 | Msa0324830:exon | 35.0% | |
| TGTCCAAAGTGAAATTATGG+GGG | + | chr2_4:30763007-30763026 | Msa0324830:exon | 35.0% | |
| ! | ATGCCCTCAATTGATGATAT+TGG | + | chr2_4:30763047-30763066 | Msa0324830:CDS | 35.0% |
| CAAATTGGACCTATAATACC+TGG | + | chr2_4:30763140-30763159 | Msa0324830:CDS | 35.0% | |
| TGATCAGTACCAGGTATTAT+AGG | - | chr2_4:30763152-30763171 | None:intergenic | 35.0% | |
| TAGCACTTCTGTTGCAATTT+AGG | + | chr2_4:30763251-30763270 | Msa0324830:intron | 35.0% | |
| ATTTCCAGAGTATGACAAGT+TGG | - | chr2_4:30763281-30763300 | None:intergenic | 35.0% | |
| ATTCGTGGATCAATGATAGA+AGG | + | chr2_4:30763299-30763318 | Msa0324830:CDS | 35.0% | |
| TTTAATGCTGTGTATACTGG+AGG | + | chr2_4:30763335-30763354 | Msa0324830:CDS | 35.0% | |
| TTAATGCTGTGTATACTGGA+GGG | + | chr2_4:30763336-30763355 | Msa0324830:CDS | 35.0% | |
| ! | TGGTTTAGGGTACAAAACAA+TGG | + | chr2_4:30763493-30763512 | Msa0324830:CDS | 35.0% |
| TGAAGAGGGTCTTACAAAAA+GGG | - | chr2_4:30763613-30763632 | None:intergenic | 35.0% | |
| TTGAAGAGGGTCTTACAAAA+AGG | - | chr2_4:30763614-30763633 | None:intergenic | 35.0% | |
| GGAAAGAGAATGTACATTGT+TGG | + | chr2_4:30763665-30763684 | Msa0324830:intron | 35.0% | |
| ! | GTGGTAGTGTTATTATAGCA+TGG | + | chr2_4:30763758-30763777 | Msa0324830:intron | 35.0% |
| AGGCCGTTTAAACGAAAATA+GGG | - | chr2_4:30764035-30764054 | None:intergenic | 35.0% | |
| TCAGATGATAAAAGGTTGTG+GGG | - | chr2_4:30764100-30764119 | None:intergenic | 35.0% | |
| CTCAGATGATAAAAGGTTGT+GGG | - | chr2_4:30764101-30764120 | None:intergenic | 35.0% | |
| ACTCAGATGATAAAAGGTTG+TGG | - | chr2_4:30764102-30764121 | None:intergenic | 35.0% | |
| ATTTAATGCATACCCATGCT+CGG | + | chr2_4:30764319-30764338 | Msa0324830:intron | 35.0% | |
| GTCTGCTATTCACAAATATC+AGG | - | chr2_4:30764375-30764394 | None:intergenic | 35.0% | |
| CATCAGATACCACATTCTTT+GGG | - | chr2_4:30764481-30764500 | None:intergenic | 35.0% | |
| ACATCAGATACCACATTCTT+TGG | - | chr2_4:30764482-30764501 | None:intergenic | 35.0% | |
| ! | TGATATTGCTGATTGTGTCT+TGG | - | chr2_4:30764591-30764610 | None:intergenic | 35.0% |
| GAGGTAGTACAACTTATAAG+TGG | - | chr2_4:30764732-30764751 | None:intergenic | 35.0% | |
| TTACAAGGGTCTTCCATATA+GGG | - | chr2_4:30764758-30764777 | None:intergenic | 35.0% | |
| TTTACAAGGGTCTTCCATAT+AGG | - | chr2_4:30764759-30764778 | None:intergenic | 35.0% | |
| !! | GTACTTAAGCTCTAAGTACA+TGG | + | chr2_4:30764961-30764980 | Msa0324830:intron | 35.0% |
| GAAGCTATGAGTAACAGTTA+TGG | + | chr2_4:30765020-30765039 | Msa0324830:intron | 35.0% | |
| !! | TTTTTCGAAGTCTTGTGCTT+TGG | + | chr2_4:30765234-30765253 | Msa0324830:intron | 35.0% |
| GTCAATGAAGTCTTACATGT+AGG | + | chr2_4:30765256-30765275 | Msa0324830:intron | 35.0% | |
| ATTAATACGAGTCATACTCC+TGG | + | chr2_4:30765298-30765317 | Msa0324830:intron | 35.0% | |
| TGCCGATATATCTTGGTTAA+TGG | + | chr2_4:30765434-30765453 | Msa0324830:intron | 35.0% | |
| ! | ATTTTGCATTGAAAGTTGGG+TGG | - | chr2_4:30765547-30765566 | None:intergenic | 35.0% |
| CGAACAAAGATTAAGCTTGA+AGG | + | chr2_4:30765806-30765825 | Msa0324830:CDS | 35.0% | |
| GTTCTGACATTGTGATATGT+GGG | + | chr2_4:30765855-30765874 | Msa0324830:CDS | 35.0% | |
| ! | ACTGGTCTACATAAAGCCAT+AGG | - | chr2_4:30762979-30762998 | None:intergenic | 40.0% |
| AACAAGAACTGATCAGTACC+AGG | - | chr2_4:30763161-30763180 | None:intergenic | 40.0% | |
| ! | TGTCATACTCTGGAAATTCG+TGG | + | chr2_4:30763284-30763303 | Msa0324830:CDS | 40.0% |
| ! | TATGTTTTCTTCCCCTGACA+TGG | + | chr2_4:30763423-30763442 | Msa0324830:intron | 40.0% |
| ! | GGTCTTATAAATAGGGACAG+GGG | - | chr2_4:30763578-30763597 | None:intergenic | 40.0% |
| ! | GGGTCTTATAAATAGGGACA+GGG | - | chr2_4:30763579-30763598 | None:intergenic | 40.0% |
| ! | AGGGTCTTATAAATAGGGAC+AGG | - | chr2_4:30763580-30763599 | None:intergenic | 40.0% |
| ! | AAGGGTCTTATGTATAGGGA+CGG | + | chr2_4:30763736-30763755 | Msa0324830:intron | 40.0% |
| ATGAATGTGGTTGAGACACT+TGG | - | chr2_4:30763863-30763882 | None:intergenic | 40.0% | |
| TGTCTCAACCACATTCATTC+TGG | + | chr2_4:30763865-30763884 | Msa0324830:intron | 40.0% | |
| CAGGCCGTTTAAACGAAAAT+AGG | - | chr2_4:30764036-30764055 | None:intergenic | 40.0% | |
| ! | CTATTTTCGTTTAAACGGCC+TGG | + | chr2_4:30764034-30764053 | Msa0324830:intron | 40.0% |
| TAAAAGGTTGTGGGGACATT+TGG | - | chr2_4:30764092-30764111 | None:intergenic | 40.0% | |
| TTTAATGCATACCCATGCTC+GGG | + | chr2_4:30764320-30764339 | Msa0324830:intron | 40.0% | |
| GATTTGACTCTTGACGATGT+TGG | + | chr2_4:30764401-30764420 | Msa0324830:CDS | 40.0% | |
| TGTGTAGACAAGTTCAATGC+AGG | - | chr2_4:30764429-30764448 | None:intergenic | 40.0% | |
| TTAGTTCCATCTTTGCACAC+AGG | - | chr2_4:30764452-30764471 | None:intergenic | 40.0% | |
| GTGTGCAAAGATGGAACTAA+AGG | + | chr2_4:30764452-30764471 | Msa0324830:CDS | 40.0% | |
| GTATCTGATGTGATTTCTCC+TGG | + | chr2_4:30764491-30764510 | Msa0324830:CDS | 40.0% | |
| ! | TAACATGGCCCTGATTTTGT+TGG | + | chr2_4:30764559-30764578 | Msa0324830:intron | 40.0% |
| GGACTTCACCAACAAAATCA+GGG | - | chr2_4:30764570-30764589 | None:intergenic | 40.0% | |
| TGGACTTCACCAACAAAATC+AGG | - | chr2_4:30764571-30764590 | None:intergenic | 40.0% | |
| CGATAGGCAAAAACTCACAT+GGG | - | chr2_4:30764903-30764922 | None:intergenic | 40.0% | |
| ACGATAGGCAAAAACTCACA+TGG | - | chr2_4:30764904-30764923 | None:intergenic | 40.0% | |
| ! | ATGTGAGTTTTTGCCTATCG+TGG | + | chr2_4:30764903-30764922 | Msa0324830:intron | 40.0% |
| ! | TGTGAGTTTTTGCCTATCGT+GGG | + | chr2_4:30764904-30764923 | Msa0324830:intron | 40.0% |
| TATTGGAATACCACGATACG+TGG | - | chr2_4:30764935-30764954 | None:intergenic | 40.0% | |
| ATCCCATGTGAATTCGTCTT+CGG | - | chr2_4:30764998-30765017 | None:intergenic | 40.0% | |
| GAGAGAGAGAGAGAAATAGT+TGG | - | chr2_4:30765143-30765162 | None:intergenic | 40.0% | |
| TGAAGTCTTACATGTAGGGA+CGG | + | chr2_4:30765261-30765280 | Msa0324830:intron | 40.0% | |
| GCAACTATAGTACGATACAC+TGG | + | chr2_4:30765346-30765365 | Msa0324830:intron | 40.0% | |
| ! | TCAACTGTGCCGATATATCT+TGG | + | chr2_4:30765427-30765446 | Msa0324830:intron | 40.0% |
| ! | TTTTTGTCTTCTGTGCTCAG+CGG | + | chr2_4:30765673-30765692 | Msa0324830:intron | 40.0% |
| ATTATGAGCTCCATTCCCTT+AGG | - | chr2_4:30765701-30765720 | None:intergenic | 40.0% | |
| ! | GGTTCTGACATTGTGATATG+TGG | + | chr2_4:30765854-30765873 | Msa0324830:CDS | 40.0% |
| ACTTTGGACACCATCACAAC+TGG | - | chr2_4:30762997-30763016 | None:intergenic | 45.0% | |
| TGGCCCCCATAATTTCACTT+TGG | - | chr2_4:30763013-30763032 | None:intergenic | 45.0% | |
| ! | TGAGGGCATATATGATGCTG+TGG | - | chr2_4:30763036-30763055 | None:intergenic | 45.0% |
| TCCACCAACTTGTCATACTC+TGG | + | chr2_4:30763274-30763293 | Msa0324830:CDS | 45.0% | |
| ! | TCCAGAGTATGACAAGTTGG+TGG | - | chr2_4:30763278-30763297 | None:intergenic | 45.0% |
| CATTCTCCTTTCTCCCTGAA+AGG | - | chr2_4:30763463-30763482 | None:intergenic | 45.0% | |
| TTGTACCCTAAACCACTCGT+GGG | - | chr2_4:30763488-30763507 | None:intergenic | 45.0% | |
| TTTGTACCCTAAACCACTCG+TGG | - | chr2_4:30763489-30763508 | None:intergenic | 45.0% | |
| GTAGTCAAGGTGAGTTGTGT+AGG | + | chr2_4:30763533-30763552 | Msa0324830:intron | 45.0% | |
| ! | CAAGCCTTATCCCAGTAAGT+GGG | + | chr2_4:30763800-30763819 | Msa0324830:intron | 45.0% |
| ! | AAGCCTTATCCCAGTAAGTG+GGG | + | chr2_4:30763801-30763820 | Msa0324830:intron | 45.0% |
| TCGGGTCACTACACTAGTTA+TGG | + | chr2_4:30764338-30764357 | Msa0324830:intron | 45.0% | |
| TACACACCTGTGTGCAAAGA+TGG | + | chr2_4:30764443-30764462 | Msa0324830:CDS | 45.0% | |
| TAAAGGCAGCCCAAAGAATG+TGG | + | chr2_4:30764469-30764488 | Msa0324830:CDS | 45.0% | |
| GTACTACCTCAGTCCCTATA+TGG | + | chr2_4:30764742-30764761 | Msa0324830:intron | 45.0% | |
| TCTCCTCCAAACTTGATCCT+GGG | + | chr2_4:30764841-30764860 | Msa0324830:intron | 45.0% | |
| CACCGAAGACGAATTCACAT+GGG | + | chr2_4:30764993-30765012 | Msa0324830:intron | 45.0% | |
| TCAAACCTTACTCCTCCACT+GGG | - | chr2_4:30765074-30765093 | None:intergenic | 45.0% | |
| TCTCTCTCTCTCTCAGTTGA+AGG | + | chr2_4:30765159-30765178 | Msa0324830:intron | 45.0% | |
| CTGGTTAAGGAAGCCAAAAG+TGG | + | chr2_4:30765475-30765494 | Msa0324830:intron | 45.0% | |
| ! | TTTGGTGGACATGAAGGAGT+TGG | + | chr2_4:30765767-30765786 | Msa0324830:CDS | 45.0% |
| !!! | AATTTTTAAGTTATAAATTA+GGG | - | chr2_4:30764138-30764157 | None:intergenic | 5.0% |
| !!! | TAATTTTTAAGTTATAAATT+AGG | - | chr2_4:30764139-30764158 | None:intergenic | 5.0% |
| GGGCATATATGATGCTGTGG+TGG | - | chr2_4:30763033-30763052 | None:intergenic | 50.0% | |
| TGAGCCTGTCCGAAGTGATT+GGG | + | chr2_4:30763091-30763110 | Msa0324830:CDS | 50.0% | |
| GCTGTGTATACTGGAGGGTT+AGG | + | chr2_4:30763341-30763360 | Msa0324830:intron | 50.0% | |
| GGCAACAAGTTCCATGTCAG+GGG | - | chr2_4:30763437-30763456 | None:intergenic | 50.0% | |
| GGGCAACAAGTTCCATGTCA+GGG | - | chr2_4:30763438-30763457 | None:intergenic | 50.0% | |
| AGGGCAACAAGTTCCATGTC+AGG | - | chr2_4:30763439-30763458 | None:intergenic | 50.0% | |
| !! | AACTTGTTGCCCTGCCTTTC+AGG | + | chr2_4:30763446-30763465 | Msa0324830:intron | 50.0% |
| ! | ACTTGTTGCCCTGCCTTTCA+GGG | + | chr2_4:30763447-30763466 | Msa0324830:intron | 50.0% |
| TCCTTTCTCCCTGAAAGGCA+GGG | - | chr2_4:30763458-30763477 | None:intergenic | 50.0% | |
| AATGCACCCACGAGTGGTTT+AGG | + | chr2_4:30763479-30763498 | Msa0324830:CDS | 50.0% | |
| ATGCACCCACGAGTGGTTTA+GGG | + | chr2_4:30763480-30763499 | Msa0324830:CDS | 50.0% | |
| ! | GGTCTTATGTATAGGGACGG+TGG | + | chr2_4:30763739-30763758 | Msa0324830:intron | 50.0% |
| CCACTTACTGGGATAAGGCT+TGG | - | chr2_4:30763802-30763821 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCAGTAAG+TGG | + | chr2_4:30763799-30763818 | Msa0324830:intron | 50.0% |
| TGACCCCACTTACTGGGATA+AGG | - | chr2_4:30763807-30763826 | None:intergenic | 50.0% | |
| CTATGCTGACCCCACTTACT+GGG | - | chr2_4:30763813-30763832 | None:intergenic | 50.0% | |
| ACTATGCTGACCCCACTTAC+TGG | - | chr2_4:30763814-30763833 | None:intergenic | 50.0% | |
| CAACCACATTCATTCTGGCG+CGG | + | chr2_4:30763870-30763889 | Msa0324830:intron | 50.0% | |
| GATTCGAAATTCTCGCTGCC+AGG | - | chr2_4:30764055-30764074 | None:intergenic | 50.0% | |
| TGGGGACATTTGGTATGCTG+GGG | - | chr2_4:30764082-30764101 | None:intergenic | 50.0% | |
| GTGGGGACATTTGGTATGCT+GGG | - | chr2_4:30764083-30764102 | None:intergenic | 50.0% | |
| TGTGGGGACATTTGGTATGC+TGG | - | chr2_4:30764084-30764103 | None:intergenic | 50.0% | |
| TAGTGTAGTGACCCGAGCAT+GGG | - | chr2_4:30764334-30764353 | None:intergenic | 50.0% | |
| GGTCTTCCATATAGGGACTG+AGG | - | chr2_4:30764751-30764770 | None:intergenic | 50.0% | |
| GGATCAAGTTTGGAGGAGAC+AGG | - | chr2_4:30764840-30764859 | None:intergenic | 50.0% | |
| GTCTCCTCCAAACTTGATCC+TGG | + | chr2_4:30764840-30764859 | Msa0324830:intron | 50.0% | |
| CTCCTCCAAACTTGATCCTG+GGG | + | chr2_4:30764842-30764861 | Msa0324830:intron | 50.0% | |
| AATTATGGTAGCCTAGCCCC+AGG | - | chr2_4:30764861-30764880 | None:intergenic | 50.0% | |
| TACGTGGCAAATCCCACGAT+AGG | - | chr2_4:30764919-30764938 | None:intergenic | 50.0% | |
| CCATGTGAATTCGTCTTCGG+TGG | - | chr2_4:30764995-30765014 | None:intergenic | 50.0% | |
| CCACCGAAGACGAATTCACA+TGG | + | chr2_4:30764992-30765011 | Msa0324830:intron | 50.0% | |
| CTAACTTGACCCACAAGGCT+GGG | - | chr2_4:30765049-30765068 | None:intergenic | 50.0% | |
| TCTAACTTGACCCACAAGGC+TGG | - | chr2_4:30765050-30765069 | None:intergenic | 50.0% | |
| ! | GGGTTCTAACTTGACCCACA+AGG | - | chr2_4:30765054-30765073 | None:intergenic | 50.0% |
| TGGGTCAAGTTAGAACCCAG+TGG | + | chr2_4:30765056-30765075 | Msa0324830:intron | 50.0% | |
| GTCAAGTTAGAACCCAGTGG+AGG | + | chr2_4:30765059-30765078 | Msa0324830:intron | 50.0% | |
| TAGAACCCAGTGGAGGAGTA+AGG | + | chr2_4:30765066-30765085 | Msa0324830:intron | 50.0% | |
| GTCAAACCTTACTCCTCCAC+TGG | - | chr2_4:30765075-30765094 | None:intergenic | 50.0% | |
| AGTCTTACATGTAGGGACGG+AGG | + | chr2_4:30765264-30765283 | Msa0324830:intron | 50.0% | |
| AAATGTTAACCAGTGCCCCG+GGG | - | chr2_4:30765598-30765617 | None:intergenic | 50.0% | |
| GAAATGTTAACCAGTGCCCC+GGG | - | chr2_4:30765599-30765618 | None:intergenic | 50.0% | |
| GGAAATGTTAACCAGTGCCC+CGG | - | chr2_4:30765600-30765619 | None:intergenic | 50.0% | |
| GTGAGCCTGTCCGAAGTGAT+TGG | + | chr2_4:30763090-30763109 | Msa0324830:CDS | 55.0% | |
| GTCCACGAGCCCAATCACTT+CGG | - | chr2_4:30763103-30763122 | None:intergenic | 55.0% | |
| CTCCTTTCTCCCTGAAAGGC+AGG | - | chr2_4:30763459-30763478 | None:intergenic | 55.0% | |
| AAGGAGAATGCACCCACGAG+TGG | + | chr2_4:30763473-30763492 | Msa0324830:CDS | 55.0% | |
| AGACCGCGCCAGAATGAATG+TGG | - | chr2_4:30763876-30763895 | None:intergenic | 55.0% | |
| CTAGTGTAGTGACCCGAGCA+TGG | - | chr2_4:30764335-30764354 | None:intergenic | 55.0% | |
| AGCCCCAGGATCAAGTTTGG+AGG | - | chr2_4:30764847-30764866 | None:intergenic | 55.0% | |
| CCTAGCCCCAGGATCAAGTT+TGG | - | chr2_4:30764850-30764869 | None:intergenic | 55.0% | |
| CCAAACTTGATCCTGGGGCT+AGG | + | chr2_4:30764847-30764866 | Msa0324830:intron | 55.0% | |
| GTGGGATTTGCCACGTATCG+TGG | + | chr2_4:30764922-30764941 | Msa0324830:intron | 55.0% | |
| TGACTCTTAACCAGTGCCCC+CGG | + | chr2_4:30765578-30765597 | Msa0324830:intron | 55.0% | |
| AATGTTAACCAGTGCCCCGG+GGG | - | chr2_4:30765597-30765616 | None:intergenic | 55.0% | |
| TCTGTGCTCAGCGGATCCTA+AGG | + | chr2_4:30765682-30765701 | Msa0324830:intron | 55.0% | |
| CTGTGCTCAGCGGATCCTAA+GGG | + | chr2_4:30765683-30765702 | Msa0324830:intron | 55.0% | |
| CTCAGCGGATCCTAAGGGAA+TGG | + | chr2_4:30765688-30765707 | Msa0324830:intron | 55.0% | |
| TCCCTGACTGTTGCGAAGAC+AGG | + | chr2_4:30765720-30765739 | Msa0324830:CDS | 55.0% | |
| GCCTGTCTTCGCAACAGTCA+GGG | - | chr2_4:30765724-30765743 | None:intergenic | 55.0% | |
| TGCCTGTCTTCGCAACAGTC+AGG | - | chr2_4:30765725-30765744 | None:intergenic | 55.0% | |
| TGACTGTTGCGAAGACAGGC+AGG | + | chr2_4:30765724-30765743 | Msa0324830:CDS | 55.0% | |
| CGAGCCCAATCACTTCGGAC+AGG | - | chr2_4:30763098-30763117 | None:intergenic | 60.0% | |
| GTCCGAAGTGATTGGGCTCG+TGG | + | chr2_4:30763098-30763117 | Msa0324830:CDS | 60.0% | |
| GCCCTGCCTTTCAGGGAGAA+AGG | + | chr2_4:30763454-30763473 | Msa0324830:intron | 60.0% | |
| ! | TTATGGCCGCCCAGCCTTGT+GGG | + | chr2_4:30765037-30765056 | Msa0324830:intron | 60.0% |
| ACTTGACCCACAAGGCTGGG+CGG | - | chr2_4:30765046-30765065 | None:intergenic | 60.0% | |
| GACTCTTAACCAGTGCCCCC+GGG | + | chr2_4:30765579-30765598 | Msa0324830:intron | 60.0% | |
| ACTCTTAACCAGTGCCCCCG+GGG | + | chr2_4:30765580-30765599 | Msa0324830:intron | 60.0% | |
| GTTATGGCCGCCCAGCCTTG+TGG | + | chr2_4:30765036-30765055 | Msa0324830:intron | 65.0% | |
| AACCAGTGCCCCCGGGGCAC+TGG | + | chr2_4:30765586-30765605 | Msa0324830:intron | 75.0% | |
| ! | AACCAGTGCCCCGGGGGCAC+TGG | - | chr2_4:30765591-30765610 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 30762969 | 30765889 | 30762969 | ID=Msa0324830;Name=Msa0324830 |
| chr2_4 | mRNA | 30762969 | 30765889 | 30762969 | ID=Msa0324830-mRNA-1;Parent=Msa0324830;Name=Msa0324830-mRNA-1;_AED=0.00;_eAED=0.00;_QI=54|1|0.8|1|1|1|5|0|204 |
| chr2_4 | exon | 30762969 | 30763161 | 30762969 | ID=Msa0324830-mRNA-1:exon:10297;Parent=Msa0324830-mRNA-1 |
| chr2_4 | exon | 30763273 | 30763357 | 30763273 | ID=Msa0324830-mRNA-1:exon:10298;Parent=Msa0324830-mRNA-1 |
| chr2_4 | exon | 30763468 | 30763541 | 30763468 | ID=Msa0324830-mRNA-1:exon:10299;Parent=Msa0324830-mRNA-1 |
| chr2_4 | exon | 30764393 | 30764512 | 30764393 | ID=Msa0324830-mRNA-1:exon:10300;Parent=Msa0324830-mRNA-1 |
| chr2_4 | exon | 30765693 | 30765889 | 30765693 | ID=Msa0324830-mRNA-1:exon:10301;Parent=Msa0324830-mRNA-1 |
| chr2_4 | five_prime_UTR | 30762969 | 30763022 | 30762969 | ID=Msa0324830-mRNA-1:five_prime_utr;Parent=Msa0324830-mRNA-1 |
| chr2_4 | CDS | 30763023 | 30763161 | 30763023 | ID=Msa0324830-mRNA-1:cds;Parent=Msa0324830-mRNA-1 |
| chr2_4 | CDS | 30763273 | 30763357 | 30763273 | ID=Msa0324830-mRNA-1:cds;Parent=Msa0324830-mRNA-1 |
| chr2_4 | CDS | 30763468 | 30763541 | 30763468 | ID=Msa0324830-mRNA-1:cds;Parent=Msa0324830-mRNA-1 |
| chr2_4 | CDS | 30764393 | 30764512 | 30764393 | ID=Msa0324830-mRNA-1:cds;Parent=Msa0324830-mRNA-1 |
| chr2_4 | CDS | 30765693 | 30765889 | 30765693 | ID=Msa0324830-mRNA-1:cds;Parent=Msa0324830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
