Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130280 | XP_003626548.1 | 95.781 | 474 | 0 | 2 | 1 | 454 | 1 | 474 | 0.0 | 932 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130280 | sp|P38557|TBG1_ARATH | 92.144 | 471 | 17 | 2 | 1 | 451 | 1 | 471 | 0.0 | 898 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130280 | G7L416 | 95.781 | 474 | 0 | 2 | 1 | 454 | 1 | 474 | 0.0 | 932 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000560 | Msa1130280 | 0.997686 | 3.526857e-247 | -8.615850e-47 |
| Msa0028420 | Msa1130280 | 0.812870 | 3.410593e-51 | -8.615850e-47 |
| Msa0035340 | Msa1130280 | 0.800853 | 1.185939e-48 | -8.615850e-47 |
| Msa0039790 | Msa1130280 | 0.856276 | 3.589710e-62 | -8.615850e-47 |
| Msa0087450 | Msa1130280 | 0.819920 | 9.014701e-53 | -8.615850e-47 |
| Msa0089950 | Msa1130280 | 0.804627 | 1.972985e-49 | -8.615850e-47 |
| Msa0090400 | Msa1130280 | 0.846863 | 1.662850e-59 | -8.615850e-47 |
| Msa0618240 | Msa1130280 | 0.825226 | 5.260193e-54 | -8.615850e-47 |
| Msa0626450 | Msa1130280 | 0.805886 | 1.074866e-49 | -8.615850e-47 |
| Msa0626490 | Msa1130280 | 0.806832 | 6.791858e-50 | -8.615850e-47 |
| Msa0652650 | Msa1130280 | 0.813415 | 2.589180e-51 | -8.615850e-47 |
| Msa0664600 | Msa1130280 | 0.801590 | 8.379909e-49 | -8.615850e-47 |
| Msa0687460 | Msa1130280 | 0.812539 | 4.030122e-51 | -8.615850e-47 |
| Msa0694200 | Msa1130280 | 0.827683 | 1.366588e-54 | -8.615850e-47 |
| Msa0700460 | Msa1130280 | 0.812523 | 4.062537e-51 | -8.615850e-47 |
| Msa0749740 | Msa1130280 | 0.807245 | 5.553532e-50 | -8.615850e-47 |
| Msa0765840 | Msa1130280 | 0.823720 | 1.189740e-53 | -8.615850e-47 |
| Msa0778550 | Msa1130280 | 0.805883 | 1.076785e-49 | -8.615850e-47 |
| Msa0815920 | Msa1130280 | 0.805471 | 1.314013e-49 | -8.615850e-47 |
| Msa0120840 | Msa1130280 | 0.839579 | 1.455968e-57 | -8.615850e-47 |
| Msa0126210 | Msa1130280 | 0.800909 | 1.155352e-48 | -8.615850e-47 |
| Msa0136650 | Msa1130280 | 0.809865 | 1.531923e-50 | -8.615850e-47 |
| Msa0137880 | Msa1130280 | 0.857874 | 1.212181e-62 | -8.615850e-47 |
| Msa0164610 | Msa1130280 | 0.823854 | 1.107108e-53 | -8.615850e-47 |
| Msa0180930 | Msa1130280 | 0.840386 | 8.970616e-58 | -8.615850e-47 |
| Msa0202290 | Msa1130280 | 0.807481 | 4.950339e-50 | -8.615850e-47 |
| Msa0222560 | Msa1130280 | 0.803882 | 2.819091e-49 | -8.615850e-47 |
| Msa0380620 | Msa1130280 | 0.802333 | 5.895807e-49 | -8.615850e-47 |
| Msa0390970 | Msa1130280 | 0.807142 | 5.840418e-50 | -8.615850e-47 |
| Msa0419700 | Msa1130280 | 0.817940 | 2.540148e-52 | -8.615850e-47 |
| Msa0428150 | Msa1130280 | 0.832624 | 8.498350e-56 | -8.615850e-47 |
| Msa0430260 | Msa1130280 | 0.806194 | 9.261917e-50 | -8.615850e-47 |
| Msa0434920 | Msa1130280 | 0.808516 | 2.980691e-50 | -8.615850e-47 |
| Msa0442830 | Msa1130280 | 0.826847 | 2.166431e-54 | -8.615850e-47 |
| Msa0444070 | Msa1130280 | 0.847859 | 8.857595e-60 | -8.615850e-47 |
| Msa0462500 | Msa1130280 | 0.832766 | 7.840153e-56 | -8.615850e-47 |
| Msa0981320 | Msa1130280 | 0.833762 | 4.427225e-56 | -8.615850e-47 |
| Msa1003800 | Msa1130280 | 0.811918 | 5.505693e-51 | -8.615850e-47 |
| Msa1018690 | Msa1130280 | 0.839744 | 1.319442e-57 | -8.615850e-47 |
| Msa1034600 | Msa1130280 | 0.818216 | 2.200365e-52 | -8.615850e-47 |
| Msa1037640 | Msa1130280 | 0.908355 | 1.872529e-81 | -8.615850e-47 |
| Msa1039220 | Msa1130280 | 0.824637 | 7.246197e-54 | -8.615850e-47 |
| Msa1042160 | Msa1130280 | 0.827662 | 1.382208e-54 | -8.615850e-47 |
| Msa1042190 | Msa1130280 | 0.827115 | 1.869248e-54 | -8.615850e-47 |
| Msa1045140 | Msa1130280 | 0.813493 | 2.489329e-51 | -8.615850e-47 |
| Msa1072960 | Msa1130280 | 0.820221 | 7.690206e-53 | -8.615850e-47 |
| Msa1074370 | Msa1130280 | 0.822020 | 2.962088e-53 | -8.615850e-47 |
| Msa1080000 | Msa1130280 | 0.816474 | 5.429096e-52 | -8.615850e-47 |
| Msa1096960 | Msa1130280 | 0.801804 | 7.573711e-49 | -8.615850e-47 |
| Msa1103580 | Msa1130280 | 0.815272 | 1.006611e-51 | -8.615850e-47 |
| Msa1105640 | Msa1130280 | 0.801412 | 9.116978e-49 | -8.615850e-47 |
| Msa0255090 | Msa1130280 | 0.805328 | 1.407343e-49 | -8.615850e-47 |
| Msa0259380 | Msa1130280 | 0.807420 | 5.100399e-50 | -8.615850e-47 |
| Msa0267110 | Msa1130280 | 0.855586 | 5.713493e-62 | -8.615850e-47 |
| Msa0283800 | Msa1130280 | 0.824739 | 6.856002e-54 | -8.615850e-47 |
| Msa0292330 | Msa1130280 | 0.826429 | 2.725901e-54 | -8.615850e-47 |
| Msa0292400 | Msa1130280 | 0.815468 | 9.102833e-52 | -8.615850e-47 |
| Msa0301820 | Msa1130280 | 0.801938 | 7.110325e-49 | -8.615850e-47 |
| Msa0307280 | Msa1130280 | 0.822539 | 2.244493e-53 | -8.615850e-47 |
| Msa0321920 | Msa1130280 | 0.833264 | 5.892184e-56 | -8.615850e-47 |
| Msa0349710 | Msa1130280 | 0.867331 | 1.480413e-65 | -8.615850e-47 |
| Msa1113340 | Msa1130280 | 0.846484 | 2.110721e-59 | -8.615850e-47 |
| Msa1116220 | Msa1130280 | 0.810697 | 1.013462e-50 | -8.615850e-47 |
| Msa1123210 | Msa1130280 | 0.821608 | 3.688499e-53 | -8.615850e-47 |
| Msa1130280 | Msa1147910 | 0.810283 | 1.245115e-50 | -8.615850e-47 |
| Msa1130280 | Msa1160910 | 0.854059 | 1.583477e-61 | -8.615850e-47 |
| Msa1130280 | Msa1162150 | 0.803476 | 3.423989e-49 | -8.615850e-47 |
| Msa1130280 | Msa1167470 | 0.830632 | 2.633111e-55 | -8.615850e-47 |
| Msa1130280 | Msa1216110 | 0.805463 | 1.319092e-49 | -8.615850e-47 |
| Msa1130280 | Msa1217050 | 0.836972 | 6.839104e-57 | -8.615850e-47 |
| Msa1130280 | Msa1217210 | 0.823641 | 1.241304e-53 | -8.615850e-47 |
| Msa1130280 | Msa1225700 | 0.806477 | 8.071966e-50 | -8.615850e-47 |
| Msa1130280 | Msa1232710 | 0.800532 | 1.378866e-48 | -8.615850e-47 |
| Msa1130280 | Msa1240770 | 0.831379 | 1.726137e-55 | -8.615850e-47 |
| Msa1130280 | Msa1282260 | 0.824391 | 8.277867e-54 | -8.615850e-47 |
| Msa1130280 | Msa1306340 | 0.802001 | 6.901580e-49 | -8.615850e-47 |
| Msa1130280 | Msa1321340 | 0.851986 | 6.206319e-61 | -8.615850e-47 |
| Msa1130280 | Msa1369550 | 0.819224 | 1.299502e-52 | -8.615850e-47 |
| Msa1130280 | Msa1393780 | 0.824627 | 7.285906e-54 | -8.615850e-47 |
| Msa1130280 | Msa1411790 | 0.835131 | 2.006161e-56 | -8.615850e-47 |
| Msa1130280 | Msa1413690 | 0.815129 | 1.082655e-51 | -8.615850e-47 |
| Msa1130280 | Msa1431480 | 0.845871 | 3.097983e-59 | -8.615850e-47 |
| Msa1130280 | Msa1440960 | 0.802769 | 4.793946e-49 | -8.615850e-47 |
| Msa1130280 | Msa1454140 | 0.800027 | 1.747079e-48 | -8.615850e-47 |
| Msa0483910 | Msa1130280 | 0.810576 | 1.075975e-50 | -8.615850e-47 |
| Msa0517250 | Msa1130280 | 0.829398 | 5.264806e-55 | -8.615850e-47 |
| Msa0532070 | Msa1130280 | 0.815158 | 1.066736e-51 | -8.615850e-47 |
| Msa0547900 | Msa1130280 | 0.801602 | 8.335179e-49 | -8.615850e-47 |
| Msa0556170 | Msa1130280 | 0.822757 | 1.997100e-53 | -8.615850e-47 |
| Msa0845440 | Msa1130280 | 0.811049 | 8.501887e-51 | -8.615850e-47 |
| Msa0869780 | Msa1130280 | 0.801329 | 9.479973e-49 | -8.615850e-47 |
| Msa0919770 | Msa1130280 | 0.817268 | 3.601926e-52 | -8.615850e-47 |
| Msa0945110 | Msa1130280 | 0.836497 | 9.038009e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130280 | MtrunA17_Chr7g0275431 | 95.781 | 474 | 0 | 2 | 1 | 454 | 1 | 474 | 0.0 | 932 |
| Msa1130280 | MtrunA17_Chr4g0007371 | 34.247 | 438 | 253 | 9 | 3 | 419 | 2 | 425 | 2.30e-77 | 248 |
| Msa1130280 | MtrunA17_Chr8g0386781 | 33.486 | 436 | 257 | 8 | 3 | 419 | 2 | 423 | 2.42e-77 | 248 |
| Msa1130280 | MtrunA17_Chr4g0008401 | 33.486 | 436 | 257 | 8 | 3 | 419 | 2 | 423 | 3.45e-77 | 247 |
| Msa1130280 | MtrunA17_Chr1g0203181 | 33.486 | 436 | 257 | 8 | 3 | 419 | 2 | 423 | 4.64e-77 | 247 |
| Msa1130280 | MtrunA17_Chr4g0008361 | 33.486 | 436 | 257 | 8 | 3 | 419 | 2 | 423 | 5.75e-77 | 247 |
| Msa1130280 | MtrunA17_Chr2g0292921 | 33.486 | 436 | 257 | 8 | 3 | 419 | 2 | 423 | 9.09e-77 | 246 |
| Msa1130280 | MtrunA17_Chr3g0142731 | 34.014 | 441 | 250 | 10 | 3 | 419 | 2 | 425 | 1.87e-76 | 246 |
| Msa1130280 | MtrunA17_Chr4g0051631 | 33.486 | 436 | 257 | 8 | 3 | 419 | 2 | 423 | 2.54e-76 | 245 |
| Msa1130280 | MtrunA17_Chr8g0393021 | 33.410 | 437 | 257 | 9 | 3 | 419 | 2 | 424 | 9.15e-76 | 244 |
| Msa1130280 | MtrunA17_Chr7g0255791 | 33.257 | 436 | 258 | 8 | 3 | 419 | 2 | 423 | 5.75e-75 | 241 |
| Msa1130280 | MtrunA17_Chr7g0253411 | 30.700 | 443 | 270 | 8 | 3 | 419 | 2 | 433 | 8.43e-65 | 215 |
| Msa1130280 | MtrunA17_Chr4g0054511 | 30.856 | 444 | 268 | 9 | 3 | 419 | 2 | 433 | 1.04e-62 | 209 |
| Msa1130280 | MtrunA17_Chr8g0378821 | 29.571 | 443 | 275 | 8 | 3 | 419 | 2 | 433 | 2.07e-62 | 209 |
| Msa1130280 | MtrunA17_Chr6g0461281 | 30.700 | 443 | 269 | 8 | 3 | 418 | 2 | 433 | 2.19e-62 | 209 |
| Msa1130280 | MtrunA17_Chr3g0140821 | 30.856 | 444 | 268 | 9 | 3 | 419 | 2 | 433 | 3.10e-62 | 208 |
| Msa1130280 | MtrunA17_Chr1g0206881 | 30.631 | 444 | 269 | 9 | 3 | 419 | 2 | 433 | 9.15e-62 | 207 |
| Msa1130280 | MtrunA17_Chr2g0300671 | 29.638 | 442 | 271 | 10 | 3 | 419 | 2 | 428 | 1.11e-48 | 172 |
| Msa1130280 | MtrunA17_Chr2g0300491 | 28.733 | 442 | 275 | 10 | 3 | 419 | 2 | 428 | 1.80e-46 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130280 | AT3G61650.1 | 92.144 | 471 | 17 | 2 | 1 | 451 | 1 | 471 | 0.0 | 898 |
| Msa1130280 | AT5G05620.1 | 91.507 | 471 | 20 | 2 | 1 | 451 | 1 | 471 | 0.0 | 893 |
| Msa1130280 | AT5G44340.1 | 34.404 | 436 | 253 | 8 | 3 | 419 | 2 | 423 | 3.15e-79 | 253 |
| Msa1130280 | AT4G20890.1 | 33.945 | 436 | 255 | 8 | 3 | 419 | 2 | 423 | 1.86e-78 | 251 |
| Msa1130280 | AT5G23860.2 | 33.716 | 436 | 256 | 8 | 3 | 419 | 2 | 423 | 2.35e-77 | 248 |
| Msa1130280 | AT5G23860.1 | 33.716 | 436 | 256 | 8 | 3 | 419 | 2 | 423 | 2.35e-77 | 248 |
| Msa1130280 | AT2G29550.1 | 34.174 | 436 | 254 | 8 | 3 | 419 | 2 | 423 | 2.85e-77 | 248 |
| Msa1130280 | AT1G75780.1 | 34.325 | 437 | 253 | 9 | 3 | 419 | 2 | 424 | 1.22e-76 | 246 |
| Msa1130280 | AT5G62690.1 | 33.486 | 436 | 257 | 8 | 3 | 419 | 2 | 423 | 3.83e-76 | 245 |
| Msa1130280 | AT5G62700.1 | 33.486 | 436 | 257 | 8 | 3 | 419 | 2 | 423 | 3.83e-76 | 245 |
| Msa1130280 | AT1G20010.1 | 34.325 | 437 | 253 | 9 | 3 | 419 | 2 | 424 | 5.02e-76 | 245 |
| Msa1130280 | AT5G12250.1 | 33.486 | 436 | 257 | 8 | 3 | 419 | 2 | 423 | 2.26e-75 | 243 |
| Msa1130280 | AT1G64740.1 | 29.345 | 443 | 276 | 8 | 3 | 419 | 2 | 433 | 1.92e-62 | 209 |
| Msa1130280 | AT5G19780.1 | 29.797 | 443 | 274 | 8 | 3 | 419 | 2 | 433 | 2.42e-62 | 209 |
| Msa1130280 | AT5G19770.1 | 29.797 | 443 | 274 | 8 | 3 | 419 | 2 | 433 | 2.42e-62 | 209 |
| Msa1130280 | AT4G14960.2 | 30.631 | 444 | 269 | 9 | 3 | 419 | 2 | 433 | 6.11e-62 | 208 |
| Msa1130280 | AT1G50010.1 | 30.856 | 444 | 268 | 9 | 3 | 419 | 2 | 433 | 8.03e-62 | 207 |
| Msa1130280 | AT1G04820.1 | 30.856 | 444 | 268 | 9 | 3 | 419 | 2 | 433 | 8.03e-62 | 207 |
| Msa1130280 | AT4G14960.1 | 32.249 | 369 | 220 | 7 | 3 | 349 | 2 | 362 | 4.14e-55 | 189 |
Find 124 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTTCATACTACTGATTT+TGG | 0.178192 | 7_3:+82383538 | None:intergenic |
| CTTTCTGTAGTTGTCTAAAA+AGG | 0.228088 | 7_3:+82383939 | None:intergenic |
| TTGGAACCAAGGGTTATTAA+TGG | 0.245426 | 7_3:-82387459 | Msa1130280:CDS |
| TTTAGCTTGGCTAGCATCTT+TGG | 0.260486 | 7_3:+82385001 | None:intergenic |
| AAGAGACATTATTGAGAGTT+TGG | 0.287511 | 7_3:-82383742 | Msa1130280:CDS |
| ATTCCCCATTTGATATAATC+TGG | 0.291812 | 7_3:+82383693 | None:intergenic |
| CCGTGCTTTATTGATTGATT+TGG | 0.301583 | 7_3:-82387478 | Msa1130280:CDS |
| GTTCTATGTCATTCAATTGC+TGG | 0.305453 | 7_3:-82386162 | Msa1130280:CDS |
| ACCAGATCGGTATGGAATTC+TGG | 0.309683 | 7_3:-82387702 | Msa1130280:CDS |
| GTATATGGTTGGTTTGTTAT+TGG | 0.315591 | 7_3:-82383080 | Msa1130280:three_prime_UTR |
| TATATCCTGTCATTAGAAAA+TGG | 0.320239 | 7_3:+82385403 | None:intergenic |
| TGTATTGTTTGTTTATCATT+TGG | 0.325442 | 7_3:-82383152 | Msa1130280:three_prime_UTR |
| GAGTTTGGTTGACGAATATA+AGG | 0.328007 | 7_3:-82383727 | Msa1130280:CDS |
| TCACTTGTCTCCATTTGGTT+AGG | 0.344251 | 7_3:+82385684 | None:intergenic |
| CCACATCACTTGTCTCCATT+TGG | 0.361567 | 7_3:+82385679 | None:intergenic |
| GTGGGGTCCTGCTAGTATTC+AGG | 0.370913 | 7_3:-82384371 | Msa1130280:intron |
| TCTCATGATTGTAAAGATTA+CGG | 0.376121 | 7_3:+82387418 | None:intergenic |
| GGTCATTCAGAGTCTCTAAA+AGG | 0.387096 | 7_3:+82385745 | None:intergenic |
| AATATTGTCATTACCTGAGT+TGG | 0.398405 | 7_3:+82384939 | None:intergenic |
| AATCCCCAGATTATATCAAA+TGG | 0.399374 | 7_3:-82383698 | Msa1130280:CDS |
| CTGTGTGCAGTTTGAACATA+TGG | 0.400407 | 7_3:+82384227 | None:intergenic |
| AAGAAAAGCAGAGTGCAATT+TGG | 0.403095 | 7_3:-82387951 | Msa1130280:five_prime_UTR |
| CACTAACAATAGAATAGAAA+TGG | 0.404089 | 7_3:+82387822 | None:intergenic |
| GAATGTTGAAGAAGACATAA+TGG | 0.419103 | 7_3:-82386232 | Msa1130280:CDS |
| TCTCCTGTCATCATATTATT+CGG | 0.421502 | 7_3:+82383586 | None:intergenic |
| CTGGCAGGTGACGAGCAATA+AGG | 0.421976 | 7_3:-82383253 | Msa1130280:intron |
| ACAGGAGAGGGCAGTGCTGC+AGG | 0.426001 | 7_3:-82383571 | Msa1130280:CDS |
| TCCTTCTCAACTTATCGTAC+TGG | 0.427815 | 7_3:+82383968 | None:intergenic |
| CTGGCAGGCAAAGAATATTA+TGG | 0.438413 | 7_3:-82385042 | Msa1130280:intron |
| CACTTGTCTCCATTTGGTTA+GGG | 0.438949 | 7_3:+82385685 | None:intergenic |
| CATTCAATTGCTGGAGGGAC+AGG | 0.443706 | 7_3:-82386153 | Msa1130280:CDS |
| TCCAGAATTCCATACCGATC+TGG | 0.449492 | 7_3:+82387701 | None:intergenic |
| ATTGCTGGAGGGACAGGCTC+AGG | 0.449849 | 7_3:-82386147 | Msa1130280:intron |
| GCCTCTGACAGTGGAACGTC+AGG | 0.450901 | 7_3:-82385379 | Msa1130280:intron |
| GAATTTGTTTGAGCAAATGT+TGG | 0.452915 | 7_3:+82385534 | None:intergenic |
| ATCCCCAGATTATATCAAAT+GGG | 0.456784 | 7_3:-82383697 | Msa1130280:CDS |
| GGGCAGTGCTGCAGGATCAC+TGG | 0.459086 | 7_3:-82383563 | Msa1130280:CDS |
| TGAATTCCATTAATAACCCT+TGG | 0.461984 | 7_3:+82387453 | None:intergenic |
| GGCTCAGACATTTACTGAAA+AGG | 0.462594 | 7_3:+82383989 | None:intergenic |
| GATATAATCTGGGGATTCAC+AGG | 0.462754 | 7_3:+82383704 | None:intergenic |
| CAGACATCACAGTAGAAACT+AGG | 0.469353 | 7_3:+82385511 | None:intergenic |
| GTCATTAGAAAATGGCATCT+TGG | 0.471437 | 7_3:+82385411 | None:intergenic |
| CAGTGTGTTCCCTAACCAAA+TGG | 0.473529 | 7_3:-82385694 | Msa1130280:CDS |
| TTCCCCATTTGATATAATCT+GGG | 0.474962 | 7_3:+82383694 | None:intergenic |
| AAGTCATTATTCATGTATCC+TGG | 0.481660 | 7_3:+82385465 | None:intergenic |
| GCTAGTTAACTTTATTGAGT+GGG | 0.483561 | 7_3:-82384389 | Msa1130280:CDS |
| ATATTGTCATTACCTGAGTT+GGG | 0.490303 | 7_3:+82384940 | None:intergenic |
| AGAAAATGGCATCTTGGTGT+TGG | 0.491952 | 7_3:+82385417 | None:intergenic |
| CCTGAGTAGCGAAATCTTCG+AGG | 0.493935 | 7_3:+82387638 | None:intergenic |
| AGAATTTCTTTGTTTAGTAG+TGG | 0.496021 | 7_3:+82387857 | None:intergenic |
| CAAATCAATCAATAAAGCAC+GGG | 0.496031 | 7_3:+82387479 | None:intergenic |
| AGTGTCAAAAGTGAGTTATA+TGG | 0.497975 | 7_3:+82385648 | None:intergenic |
| GAACACTTACAGCAAACATT+GGG | 0.502913 | 7_3:+82383914 | None:intergenic |
| CCTCGAAGATTTCGCTACTC+AGG | 0.506650 | 7_3:-82387638 | Msa1130280:intron |
| GAGTTGGGTCAACCTCTCCT+TGG | 0.508239 | 7_3:+82384955 | None:intergenic |
| TTAGGTCAGCGGCCTTATGT+TGG | 0.508961 | 7_3:-82384034 | Msa1130280:intron |
| GATGGCAGTGACAGTCTTGA+GGG | 0.509882 | 7_3:-82386189 | Msa1130280:CDS |
| GGAACACTTACAGCAAACAT+TGG | 0.511079 | 7_3:+82383913 | None:intergenic |
| GAATTGATATATATTTAGCT+TGG | 0.513871 | 7_3:+82384988 | None:intergenic |
| TCTTAATGCTGATTGTGTTG+TGG | 0.515975 | 7_3:-82385613 | Msa1130280:CDS |
| ATTGATTGATTTGGAACCAA+GGG | 0.524085 | 7_3:-82387469 | Msa1130280:CDS |
| TAGTATGACTAGCCAACATA+AGG | 0.524461 | 7_3:+82384022 | None:intergenic |
| ACAACCACTCTTCGTTATCC+AGG | 0.524939 | 7_3:-82385483 | Msa1130280:CDS |
| GATCCGAATAATATGATGAC+AGG | 0.524991 | 7_3:-82383589 | Msa1130280:CDS |
| AGGATATACGCCTCTGACAG+TGG | 0.526564 | 7_3:-82385388 | Msa1130280:CDS |
| ACTATTGACACGAAGAATGC+TGG | 0.527775 | 7_3:-82382998 | Msa1130280:three_prime_UTR |
| AAAAGCAGAGTGCAATTTGG+CGG | 0.543842 | 7_3:-82387948 | Msa1130280:five_prime_UTR |
| TACAGTGGTATTCTGTACTA+CGG | 0.545684 | 7_3:+82383122 | None:intergenic |
| AGATTATATCAAATGGGGAA+TGG | 0.549783 | 7_3:-82383691 | Msa1130280:CDS |
| AGCTAGTTAACTTTATTGAG+TGG | 0.551550 | 7_3:-82384390 | Msa1130280:CDS |
| GGCGGTTGAAAAGTAGAGAG+TGG | 0.555759 | 7_3:-82387930 | Msa1130280:five_prime_UTR |
| AATAATATGATGACAGGAGA+GGG | 0.566951 | 7_3:-82383583 | Msa1130280:CDS |
| AGATGGCAGTGACAGTCTTG+AGG | 0.567168 | 7_3:-82386190 | Msa1130280:CDS |
| CTAGTTAACTTTATTGAGTG+GGG | 0.569176 | 7_3:-82384388 | Msa1130280:CDS |
| TGTCATGAGGAGACTTCTGC+AGG | 0.571604 | 7_3:-82385131 | Msa1130280:intron |
| ACCTGACGTTCCACTGTCAG+AGG | 0.573775 | 7_3:+82385378 | None:intergenic |
| AGAGATAATCACACTTCAAG+TGG | 0.576431 | 7_3:-82387737 | Msa1130280:CDS |
| ATGCGGAAACCAGATCGGTA+TGG | 0.576564 | 7_3:-82387710 | Msa1130280:CDS |
| CCAAATCAATCAATAAAGCA+CGG | 0.577216 | 7_3:+82387478 | None:intergenic |
| TTATGGTCTCTTCTTATGCA+CGG | 0.578464 | 7_3:-82385025 | Msa1130280:CDS |
| CTATGTCATTCAATTGCTGG+AGG | 0.585953 | 7_3:-82386159 | Msa1130280:CDS |
| TCCCCATTTGATATAATCTG+GGG | 0.589500 | 7_3:+82383695 | None:intergenic |
| TCGCATACCTGAATACTAGC+AGG | 0.597022 | 7_3:+82384364 | None:intergenic |
| GGTGACGAGCAATAAGGAAG+TGG | 0.600143 | 7_3:-82383247 | Msa1130280:three_prime_UTR |
| ATAACGAAGAGTGGTTGTGC+TGG | 0.603190 | 7_3:+82385488 | None:intergenic |
| AGGAGAGGTTGACCCAACTC+AGG | 0.603351 | 7_3:-82384952 | Msa1130280:intron |
| ATATGTTCAAACTGCACACA+GGG | 0.604079 | 7_3:-82384225 | Msa1130280:intron |
| TCAATTCTGAATATCATCCA+AGG | 0.606426 | 7_3:-82384972 | Msa1130280:CDS |
| AGACATCACAGTAGAAACTA+GGG | 0.607333 | 7_3:+82385512 | None:intergenic |
| GCCAGTACGATAAGTTGAGA+AGG | 0.608803 | 7_3:-82383969 | Msa1130280:CDS |
| GACATTTACTGAAAAGGTGA+CGG | 0.609104 | 7_3:+82383995 | None:intergenic |
| TATTGATTGATTTGGAACCA+AGG | 0.610327 | 7_3:-82387470 | Msa1130280:CDS |
| TCAAAAGTGAGTTATATGGT+TGG | 0.610753 | 7_3:+82385652 | None:intergenic |
| GAACATGGTATCAGCAAAGA+CGG | 0.611540 | 7_3:-82387664 | Msa1130280:CDS |
| GGACAATGCGGAAACCAGAT+CGG | 0.618984 | 7_3:-82387715 | Msa1130280:CDS |
| GAGATAATCACACTTCAAGT+GGG | 0.619478 | 7_3:-82387736 | Msa1130280:CDS |
| AGGATACATGAATAATGACT+TGG | 0.619688 | 7_3:-82385463 | Msa1130280:CDS |
| AAACAACTCTGTCTCGAACA+TGG | 0.619782 | 7_3:-82387679 | Msa1130280:CDS |
| ATGATTGACAGAGAAGCAGA+TGG | 0.626844 | 7_3:-82386207 | Msa1130280:CDS |
| TACATGAATAATGACTTGGT+TGG | 0.628614 | 7_3:-82385459 | Msa1130280:CDS |
| CATATGTTCAAACTGCACAC+AGG | 0.630458 | 7_3:-82384226 | Msa1130280:CDS |
| GTGTTGGAATCAAAGAGGCA+AGG | 0.634632 | 7_3:+82385433 | None:intergenic |
| TCCCCAGATTATATCAAATG+GGG | 0.635043 | 7_3:-82383696 | Msa1130280:CDS |
| TTATATCAAATGGGGAATGG+AGG | 0.637675 | 7_3:-82383688 | Msa1130280:intron |
| TGTGTGCAGTTTGAACATAT+GGG | 0.640655 | 7_3:+82384228 | None:intergenic |
| GTGTGCAGTTTGAACATATG+GGG | 0.646116 | 7_3:+82384229 | None:intergenic |
| TATGTCATTCAATTGCTGGA+GGG | 0.647449 | 7_3:-82386158 | Msa1130280:CDS |
| TCTGAATATCATCCAAGGAG+AGG | 0.649229 | 7_3:-82384967 | Msa1130280:CDS |
| TTGATTCATCAAACTCTGAG+AGG | 0.650287 | 7_3:+82383763 | None:intergenic |
| TGAAGTGTGATTATCTCTCG+AGG | 0.657196 | 7_3:+82387742 | None:intergenic |
| GAATAATATGATGACAGGAG+AGG | 0.675044 | 7_3:-82383584 | Msa1130280:CDS |
| TCTTGGTGTTGGAATCAAAG+AGG | 0.676873 | 7_3:+82385428 | None:intergenic |
| ACACGAAGAATGCTGGCAAG+TGG | 0.679689 | 7_3:-82382991 | Msa1130280:three_prime_UTR |
| AGGTTCATGAGAGTTTGCAG+AGG | 0.683623 | 7_3:-82384426 | Msa1130280:CDS |
| GGTTGAAAAGTAGAGAGTGG+TGG | 0.684934 | 7_3:-82387927 | Msa1130280:five_prime_UTR |
| CTGAAAACGAATAACTACAG+TGG | 0.686210 | 7_3:+82383107 | None:intergenic |
| GTATCCTGGATAACGAAGAG+TGG | 0.693788 | 7_3:+82385479 | None:intergenic |
| CCACTGTGCTTGATGTCATG+AGG | 0.693936 | 7_3:-82385144 | Msa1130280:CDS |
| AAATCAATCAATAAAGCACG+GGG | 0.701160 | 7_3:+82387480 | None:intergenic |
| ACACTTCAAGTGGGACAATG+CGG | 0.701458 | 7_3:-82387727 | Msa1130280:CDS |
| AATGGAGACAAGTGATGTGG+TGG | 0.707586 | 7_3:-82385676 | Msa1130280:CDS |
| CCAAATGGAGACAAGTGATG+TGG | 0.730166 | 7_3:-82385679 | Msa1130280:CDS |
| CCTCATGACATCAAGCACAG+TGG | 0.730325 | 7_3:+82385144 | None:intergenic |
| AGTGGTATTCTGTACTACGG+CGG | 0.750261 | 7_3:+82383125 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATAAATAAAATTGCAA+GGG | + | chr7_3:82384426-82384445 | None:intergenic | 10.0% |
| !! | ATATAATAAATAAAATTGCA+AGG | + | chr7_3:82384427-82384446 | None:intergenic | 10.0% |
| !! | TATTTATTATATAACTAGAA+AGG | - | chr7_3:82384435-82384454 | Msa1130280:intron | 10.0% |
| !!! | AAATAATTTTAAAAAAACAC+AGG | + | chr7_3:82385115-82385134 | None:intergenic | 10.0% |
| !!! | ATAGTTTAACATATATTTTT+AGG | - | chr7_3:82386820-82386839 | Msa1130280:intron | 10.0% |
| !!! | TTTATATTTTTTCTTTGTAT+AGG | - | chr7_3:82387330-82387349 | Msa1130280:intron | 10.0% |
| !!! | TATTTTTTTAGATATTTGTT+GGG | + | chr7_3:82387905-82387924 | None:intergenic | 10.0% |
| !!! | ATATTTTTTTAGATATTTGT+TGG | + | chr7_3:82387906-82387925 | None:intergenic | 10.0% |
| !!! | TTTTCATTTCAATTTCAAAA+AGG | - | chr7_3:82383148-82383167 | Msa1130280:three_prime_UTR | 15.0% |
| !! | TTGTAGAATATTTAATAACT+AGG | + | chr7_3:82383905-82383924 | None:intergenic | 15.0% |
| !!! | TCAACTATTTTAAAATGTAA+GGG | - | chr7_3:82384588-82384607 | Msa1130280:intron | 15.0% |
| !! | AAATTCTCAATAAAGTTAAA+GGG | + | chr7_3:82384883-82384902 | None:intergenic | 15.0% |
| !!! | AGATTAATTTCAATTTTTCA+AGG | + | chr7_3:82386326-82386345 | None:intergenic | 15.0% |
| !!! | TTAACATATATTTTTAGGAA+TGG | - | chr7_3:82386825-82386844 | Msa1130280:intron | 15.0% |
| !! | TGAAAATATTGATATGAAAT+TGG | + | chr7_3:82387052-82387071 | None:intergenic | 15.0% |
| !!! | ATTTTTTATTTATCTTGCTA+GGG | + | chr7_3:82387499-82387518 | None:intergenic | 15.0% |
| !!! | ATTATGAAAACTTTCTTTTT+TGG | - | chr7_3:82387733-82387752 | Msa1130280:CDS | 15.0% |
| !! | AACTACAAATAACAAACAAA+TGG | + | chr7_3:82383712-82383731 | None:intergenic | 20.0% |
| !!! | GTCAACTATTTTAAAATGTA+AGG | - | chr7_3:82384587-82384606 | Msa1130280:intron | 20.0% |
| !! | AATTCTCAATAAAGTTAAAG+GGG | + | chr7_3:82384882-82384901 | None:intergenic | 20.0% |
| !! | CAAATTCTCAATAAAGTTAA+AGG | + | chr7_3:82384884-82384903 | None:intergenic | 20.0% |
| !! | GAATTGATATATATTTAGCT+TGG | + | chr7_3:82385956-82385975 | None:intergenic | 20.0% |
| !! | TCTTCTATTAAAAAATACCA+CGG | + | chr7_3:82386125-82386144 | None:intergenic | 20.0% |
| !!! | TGGTATTTTTTAATAGAAGA+TGG | - | chr7_3:82386125-82386144 | Msa1130280:intron | 20.0% |
| !! | ATCATAATACAGTTTAGAAA+GGG | + | chr7_3:82386474-82386493 | None:intergenic | 20.0% |
| !! | AATCATAATACAGTTTAGAA+AGG | + | chr7_3:82386475-82386494 | None:intergenic | 20.0% |
| !!! | TATGATTTTAATGTTCTCTA+TGG | - | chr7_3:82386488-82386507 | Msa1130280:intron | 20.0% |
| !! | GATAAGCATAAAAATTAAGA+CGG | + | chr7_3:82386766-82386785 | None:intergenic | 20.0% |
| !! | CCTAATAATAATATCTTACT+TGG | + | chr7_3:82387429-82387448 | None:intergenic | 20.0% |
| !! | CCAAGTAAGATATTATTATT+AGG | - | chr7_3:82387426-82387445 | Msa1130280:CDS | 20.0% |
| !!! | TTTTTTATTTATCTTGCTAG+GGG | + | chr7_3:82387498-82387517 | None:intergenic | 20.0% |
| !!! | CATTTTTTATTTATCTTGCT+AGG | + | chr7_3:82387500-82387519 | None:intergenic | 20.0% |
| !! | TGAAATATGAATGTTAAATG+TGG | - | chr7_3:82387518-82387537 | Msa1130280:CDS | 20.0% |
| !! | TGTATTGTTTGTTTATCATT+TGG | - | chr7_3:82387789-82387808 | Msa1130280:five_prime_UTR | 20.0% |
| !! | AGAATTTCTTTGTTTAGTAG+TGG | + | chr7_3:82383087-82383106 | None:intergenic | 25.0% |
| ! | CACTAACAATAGAATAGAAA+TGG | + | chr7_3:82383122-82383141 | None:intergenic | 25.0% |
| ! | TCTCATGATTGTAAAGATTA+CGG | + | chr7_3:82383526-82383545 | None:intergenic | 25.0% |
| !!! | AATATTTTTGTTGCTGATCA+TGG | - | chr7_3:82383545-82383564 | Msa1130280:CDS | 25.0% |
| ! | CTTCACATGAAAAAACATAA+AGG | - | chr7_3:82384382-82384401 | Msa1130280:CDS | 25.0% |
| ! | TGAAAAAACATAAAGGTTGA+AGG | - | chr7_3:82384389-82384408 | Msa1130280:CDS | 25.0% |
| ! | GAAAAAACATAAAGGTTGAA+GGG | - | chr7_3:82384390-82384409 | Msa1130280:CDS | 25.0% |
| ! | CATTTAAAAAACACAAAACC+AGG | + | chr7_3:82384522-82384541 | None:intergenic | 25.0% |
| ! | ATTCTCAATAAAGTTAAAGG+GGG | + | chr7_3:82384881-82384900 | None:intergenic | 25.0% |
| ! | ATTAATTTCCAGCAAATTGT+CGG | + | chr7_3:82384929-82384948 | None:intergenic | 25.0% |
| !!! | AAATTGCTTTTAACGCATAA+TGG | - | chr7_3:82385010-82385029 | Msa1130280:CDS | 25.0% |
| ! | TCTTAAATATAGGAAGTCAA+AGG | + | chr7_3:82385060-82385079 | None:intergenic | 25.0% |
| ! | TTGACTTCCTATATTTAAGA+TGG | - | chr7_3:82385060-82385079 | Msa1130280:intron | 25.0% |
| ! | AGGTTATCCATCTTAAATAT+AGG | + | chr7_3:82385070-82385089 | None:intergenic | 25.0% |
| ! | GTGAGAAATATTTAAGCAAT+CGG | + | chr7_3:82385093-82385112 | None:intergenic | 25.0% |
| ! | TATATCCTGTCATTAGAAAA+TGG | + | chr7_3:82385541-82385560 | None:intergenic | 25.0% |
| !!! | TGCTCGAAATATCATTTTTA+TGG | + | chr7_3:82385610-82385629 | None:intergenic | 25.0% |
| ! | TCTTTACAGGACAAAAATTT+AGG | + | chr7_3:82385644-82385663 | None:intergenic | 25.0% |
| ! | TACGGAGGAAATATAAAATA+GGG | + | chr7_3:82385731-82385750 | None:intergenic | 25.0% |
| ! | TTACGGAGGAAATATAAAAT+AGG | + | chr7_3:82385732-82385751 | None:intergenic | 25.0% |
| ! | TGAAATTAATCTTCAACTGA+TGG | - | chr7_3:82386334-82386353 | Msa1130280:intron | 25.0% |
| ! | TTAATGTTCTCTATGGATTT+AGG | - | chr7_3:82386495-82386514 | Msa1130280:intron | 25.0% |
| ! | CATCAAACTAAATATGAAAG+AGG | + | chr7_3:82386647-82386666 | None:intergenic | 25.0% |
| ! | AAACAAAAAAATGAAAAGCG+AGG | + | chr7_3:82387293-82387312 | None:intergenic | 25.0% |
| !!! | TTTCTTCATACTACTGATTT+TGG | + | chr7_3:82387406-82387425 | None:intergenic | 25.0% |
| !! | ATTAGTTTACTTTCCTTCTA+GGG | - | chr7_3:82387571-82387590 | Msa1130280:intron | 25.0% |
| ! | ACAAGAATCTTAGACATTTA+TGG | + | chr7_3:82387660-82387679 | None:intergenic | 25.0% |
| !!! | TGAAAACTTTCTTTTTTGGA+TGG | - | chr7_3:82387737-82387756 | Msa1130280:CDS | 25.0% |
| !! | TTCGTTTTCAGTAATGTATA+TGG | - | chr7_3:82387846-82387865 | Msa1130280:five_prime_UTR | 25.0% |
| !! | TTTTCAGTAATGTATATGGT+TGG | - | chr7_3:82387850-82387869 | Msa1130280:five_prime_UTR | 25.0% |
| AAATCAATCAATAAAGCACG+GGG | + | chr7_3:82383464-82383483 | None:intergenic | 30.0% | |
| CAAATCAATCAATAAAGCAC+GGG | + | chr7_3:82383465-82383484 | None:intergenic | 30.0% | |
| CCAAATCAATCAATAAAGCA+CGG | + | chr7_3:82383466-82383485 | None:intergenic | 30.0% | |
| !! | TATTGATTGATTTGGAACCA+AGG | - | chr7_3:82383471-82383490 | Msa1130280:intron | 30.0% |
| !! | ATTGATTGATTTGGAACCAA+GGG | - | chr7_3:82383472-82383491 | Msa1130280:intron | 30.0% |
| TGAATTCCATTAATAACCCT+TGG | + | chr7_3:82383491-82383510 | None:intergenic | 30.0% | |
| ATTAAAGTAAGCATACCTGA+TGG | + | chr7_3:82383604-82383623 | None:intergenic | 30.0% | |
| AGTTCTCAATAACATAAGTC+TGG | - | chr7_3:82383827-82383846 | Msa1130280:intron | 30.0% | |
| ! | GATTTTCTTTAGCATGCTAA+TGG | - | chr7_3:82383856-82383875 | Msa1130280:intron | 30.0% |
| TCAGCAAAATTAGTAGTGAA+TGG | - | chr7_3:82383935-82383954 | Msa1130280:CDS | 30.0% | |
| AGAAGGAATAGAAATTAGAG+AGG | - | chr7_3:82384031-82384050 | Msa1130280:CDS | 30.0% | |
| GAAGGAATAGAAATTAGAGA+GGG | - | chr7_3:82384032-82384051 | Msa1130280:CDS | 30.0% | |
| AAATAAAGAAGGAAACCAAG+AGG | + | chr7_3:82384107-82384126 | None:intergenic | 30.0% | |
| GAGAACTGGAAAAATAAAGA+AGG | + | chr7_3:82384118-82384137 | None:intergenic | 30.0% | |
| ACTAGAGACTGAATACATAA+AGG | + | chr7_3:82384140-82384159 | None:intergenic | 30.0% | |
| ! | AGTGTCTTTTGCTTGTAAAT+TGG | - | chr7_3:82384157-82384176 | Msa1130280:intron | 30.0% |
| TCAAATTCAATCAATGACTC+TGG | - | chr7_3:82384306-82384325 | Msa1130280:intron | 30.0% | |
| AAAAACTACCGTATTATGGA+AGG | + | chr7_3:82384491-82384510 | None:intergenic | 30.0% | |
| GTACAAAAACTACCGTATTA+TGG | + | chr7_3:82384495-82384514 | None:intergenic | 30.0% | |
| TTGCACATTATAATCCTGAT+AGG | - | chr7_3:82384545-82384564 | Msa1130280:intron | 30.0% | |
| ! | TGAGTGATGAGTTACATTTT+TGG | - | chr7_3:82384635-82384654 | Msa1130280:intron | 30.0% |
| TGGTTGTTAATATCTGATCA+GGG | - | chr7_3:82384683-82384702 | Msa1130280:intron | 30.0% | |
| GAATGTTGAAGAAGACATAA+TGG | - | chr7_3:82384709-82384728 | Msa1130280:intron | 30.0% | |
| ! | TTTTTCCTAGTATTTGCCTT+AGG | - | chr7_3:82384831-82384850 | Msa1130280:intron | 30.0% |
| GAAACTTATATGATGTCCTA+AGG | + | chr7_3:82384850-82384869 | None:intergenic | 30.0% | |
| ATTAATCTTACACTCAAGAG+CGG | - | chr7_3:82384943-82384962 | Msa1130280:intron | 30.0% | |
| AGAAATATTTAAGCAATCGG+AGG | + | chr7_3:82385090-82385109 | None:intergenic | 30.0% | |
| GTTATTCCATTCATTTATGC+AGG | - | chr7_3:82385161-82385180 | Msa1130280:CDS | 30.0% | |
| TCAAAAGTGAGTTATATGGT+TGG | + | chr7_3:82385292-82385311 | None:intergenic | 30.0% | |
| AGTGTCAAAAGTGAGTTATA+TGG | + | chr7_3:82385296-82385315 | None:intergenic | 30.0% | |
| ! | GAATTTGTTTGAGCAAATGT+TGG | + | chr7_3:82385410-82385429 | None:intergenic | 30.0% |
| AAGTCATTATTCATGTATCC+TGG | + | chr7_3:82385479-82385498 | None:intergenic | 30.0% | |
| AGGATACATGAATAATGACT+TGG | - | chr7_3:82385478-82385497 | Msa1130280:CDS | 30.0% | |
| !! | TACATGAATAATGACTTGGT+TGG | - | chr7_3:82385482-82385501 | Msa1130280:CDS | 30.0% |
| TTATGGAGAAAATGACACAA+AGG | + | chr7_3:82385593-82385612 | None:intergenic | 30.0% | |
| CAAAACAACAGAATCTTTAC+AGG | + | chr7_3:82385657-82385676 | None:intergenic | 30.0% | |
| !!! | ATTCTGTTGTTTTGTTGAAC+TGG | - | chr7_3:82385663-82385682 | Msa1130280:CDS | 30.0% |
| ACGGAGGAAATATAAAATAG+GGG | + | chr7_3:82385730-82385749 | None:intergenic | 30.0% | |
| AATATCATCCGATCAGATTA+CGG | + | chr7_3:82385749-82385768 | None:intergenic | 30.0% | |
| TTCTATTGACATTAAGTTCC+TGG | - | chr7_3:82385880-82385899 | Msa1130280:intron | 30.0% | |
| TCAATTCTGAATATCATCCA+AGG | - | chr7_3:82385969-82385988 | Msa1130280:intron | 30.0% | |
| ATATTGTCATTACCTGAGTT+GGG | + | chr7_3:82386004-82386023 | None:intergenic | 30.0% | |
| AATATTGTCATTACCTGAGT+TGG | + | chr7_3:82386005-82386024 | None:intergenic | 30.0% | |
| ACTCAGTTTCAGTTAACAAA+TGG | + | chr7_3:82386059-82386078 | None:intergenic | 30.0% | |
| AACTGAAACTGAGTTACAAA+AGG | - | chr7_3:82386065-82386084 | Msa1130280:intron | 30.0% | |
| AAATGAGCTCAACAAATGAA+TGG | + | chr7_3:82386098-82386117 | None:intergenic | 30.0% | |
| ! | ATTCATTTGTTGAGCTCATT+TGG | - | chr7_3:82386097-82386116 | Msa1130280:intron | 30.0% |
| !!! | ATTTCTTTTTCAGCTTCTAC+TGG | - | chr7_3:82386206-82386225 | Msa1130280:CDS | 30.0% |
| ATGTGACGTTAATTAGAAGA+AGG | + | chr7_3:82386255-82386274 | None:intergenic | 30.0% | |
| AGCTAGTTAACTTTATTGAG+TGG | - | chr7_3:82386551-82386570 | Msa1130280:intron | 30.0% | |
| GCTAGTTAACTTTATTGAGT+GGG | - | chr7_3:82386552-82386571 | Msa1130280:intron | 30.0% | |
| CTAGTTAACTTTATTGAGTG+GGG | - | chr7_3:82386553-82386572 | Msa1130280:intron | 30.0% | |
| !! | ACAATCTTATCTTGCTTTTC+TGG | - | chr7_3:82386667-82386686 | Msa1130280:intron | 30.0% |
| TAGGAATGGTTATTATTCTG+AGG | - | chr7_3:82386839-82386858 | Msa1130280:intron | 30.0% | |
| !! | AATGGTTATTATTCTGAGGT+TGG | - | chr7_3:82386843-82386862 | Msa1130280:intron | 30.0% |
| TAATAAAAAGCAAAGCACAC+AGG | + | chr7_3:82386890-82386909 | None:intergenic | 30.0% | |
| !!! | TGTGTGCTTTGCTTTTTATT+AGG | - | chr7_3:82386889-82386908 | Msa1130280:intron | 30.0% |
| !!! | TTTGCTTTTTATTAGGTCAG+CGG | - | chr7_3:82386896-82386915 | Msa1130280:intron | 30.0% |
| CTTTCTGTAGTTGTCTAAAA+AGG | + | chr7_3:82387005-82387024 | None:intergenic | 30.0% | |
| AAGAGACATTATTGAGAGTT+TGG | - | chr7_3:82387199-82387218 | Msa1130280:intron | 30.0% | |
| AATCCCCAGATTATATCAAA+TGG | - | chr7_3:82387243-82387262 | Msa1130280:intron | 30.0% | |
| ATCCCCAGATTATATCAAAT+GGG | - | chr7_3:82387244-82387263 | Msa1130280:intron | 30.0% | |
| TTCCCCATTTGATATAATCT+GGG | + | chr7_3:82387250-82387269 | None:intergenic | 30.0% | |
| ATTCCCCATTTGATATAATC+TGG | + | chr7_3:82387251-82387270 | None:intergenic | 30.0% | |
| AGATTATATCAAATGGGGAA+TGG | - | chr7_3:82387250-82387269 | Msa1130280:intron | 30.0% | |
| TCTCCTGTCATCATATTATT+CGG | + | chr7_3:82387358-82387377 | None:intergenic | 30.0% | |
| AATAATATGATGACAGGAGA+GGG | - | chr7_3:82387358-82387377 | Msa1130280:intron | 30.0% | |
| ATTATTATTAGGCCATAAGC+AGG | - | chr7_3:82387437-82387456 | Msa1130280:CDS | 30.0% | |
| ! | CATTAGTTTACTTTCCTTCT+AGG | - | chr7_3:82387570-82387589 | Msa1130280:intron | 30.0% |
| TCGTCAACATTACATTCAAA+TGG | + | chr7_3:82387608-82387627 | None:intergenic | 30.0% | |
| !!! | TTTCTTTTTTGGATGGTTTG+CGG | - | chr7_3:82387744-82387763 | Msa1130280:CDS | 30.0% |
| !! | GTATATGGTTGGTTTGTTAT+TGG | - | chr7_3:82387861-82387880 | Msa1130280:five_prime_UTR | 30.0% |
| AAGAAAAGCAGAGTGCAATT+TGG | - | chr7_3:82382990-82383009 | Msa1130280:three_prime_UTR | 35.0% | |
| !!! | CATTTTTTTAGGGTTTCGGA+GGG | + | chr7_3:82383179-82383198 | None:intergenic | 35.0% |
| !!! | GAGGCATTTTTTTAGGGTTT+CGG | + | chr7_3:82383183-82383202 | None:intergenic | 35.0% |
| !!! | TCTCTCGAGGCATTTTTTTA+GGG | + | chr7_3:82383189-82383208 | None:intergenic | 35.0% |
| !!! | ATCTCTCGAGGCATTTTTTT+AGG | + | chr7_3:82383190-82383209 | None:intergenic | 35.0% |
| AGAGATAATCACACTTCAAG+TGG | - | chr7_3:82383204-82383223 | Msa1130280:three_prime_UTR | 35.0% | |
| GAGATAATCACACTTCAAGT+GGG | - | chr7_3:82383205-82383224 | Msa1130280:three_prime_UTR | 35.0% | |
| ! | CCGTGCTTTATTGATTGATT+TGG | - | chr7_3:82383463-82383482 | Msa1130280:intron | 35.0% |
| TTGGAACCAAGGGTTATTAA+TGG | - | chr7_3:82383482-82383501 | Msa1130280:intron | 35.0% | |
| ! | ATTTTTGTTGCTGATCATGG+TGG | - | chr7_3:82383548-82383567 | Msa1130280:CDS | 35.0% |
| !! | TTAGCATGCTAATGGTTTTG+TGG | - | chr7_3:82383864-82383883 | Msa1130280:intron | 35.0% |
| TTAGTAGTGAATGGACAGAT+AGG | - | chr7_3:82383944-82383963 | Msa1130280:CDS | 35.0% | |
| AGTCACAATTCCTGTAATCA+AGG | - | chr7_3:82383976-82383995 | Msa1130280:CDS | 35.0% | |
| GTCACAATTCCTGTAATCAA+GGG | - | chr7_3:82383977-82383996 | Msa1130280:CDS | 35.0% | |
| ATATTCCTTCCCTTGATTAC+AGG | + | chr7_3:82383989-82384008 | None:intergenic | 35.0% | |
| AAGGGAAGGAATATGTGTAA+GGG | - | chr7_3:82383995-82384014 | Msa1130280:CDS | 35.0% | |
| CTGAATACATAAAGGAGAAC+TGG | + | chr7_3:82384132-82384151 | None:intergenic | 35.0% | |
| AGTCAGTGTATAAACTAAGG+AGG | + | chr7_3:82384191-82384210 | None:intergenic | 35.0% | |
| TCCTTAGTTTATACACTGAC+TGG | - | chr7_3:82384190-82384209 | Msa1130280:intron | 35.0% | |
| ! | CCTTAGTTTATACACTGACT+GGG | - | chr7_3:82384191-82384210 | Msa1130280:intron | 35.0% |
| !! | ACAAGTGAAGCATTGTGTAA+TGG | + | chr7_3:82384278-82384297 | None:intergenic | 35.0% |
| ATCGTCAACCTTCCATAATA+CGG | - | chr7_3:82384480-82384499 | Msa1130280:intron | 35.0% | |
| ATAGTTGACTAAGACTCCTA+TGG | + | chr7_3:82384576-82384595 | None:intergenic | 35.0% | |
| TCAGATATTAACAACCACAC+AGG | + | chr7_3:82384680-82384699 | None:intergenic | 35.0% | |
| GTGGTTGTTAATATCTGATC+AGG | - | chr7_3:82384682-82384701 | Msa1130280:intron | 35.0% | |
| GTTCTATGTCATTCAATTGC+TGG | - | chr7_3:82384779-82384798 | Msa1130280:intron | 35.0% | |
| TATGTCATTCAATTGCTGGA+GGG | - | chr7_3:82384783-82384802 | Msa1130280:intron | 35.0% | |
| AACGCATAATGGCTAAGAAT+TGG | - | chr7_3:82385021-82385040 | Msa1130280:CDS | 35.0% | |
| ACGCATAATGGCTAAGAATT+GGG | - | chr7_3:82385022-82385041 | Msa1130280:CDS | 35.0% | |
| TCCATTCATTTATGCAGGTA+TGG | - | chr7_3:82385166-82385185 | Msa1130280:CDS | 35.0% | |
| CCATTCATTTATGCAGGTAT+GGG | - | chr7_3:82385167-82385186 | Msa1130280:intron | 35.0% | |
| !!! | GAACCAGTTTTTTGCTGTAT+CGG | + | chr7_3:82385220-82385239 | None:intergenic | 35.0% |
| ! | TCTTAATGCTGATTGTGTTG+TGG | - | chr7_3:82385328-82385347 | Msa1130280:intron | 35.0% |
| TGCACTTAATAGAATTGCTG+TGG | - | chr7_3:82385364-82385383 | Msa1130280:intron | 35.0% | |
| AGACATCACAGTAGAAACTA+GGG | + | chr7_3:82385432-82385451 | None:intergenic | 35.0% | |
| GTCATTAGAAAATGGCATCT+TGG | + | chr7_3:82385533-82385552 | None:intergenic | 35.0% | |
| !!! | AGATGCCATTTTCTAATGAC+AGG | - | chr7_3:82385533-82385552 | Msa1130280:CDS | 35.0% |
| GGAGGAAATATAAAATAGGG+GGG | + | chr7_3:82385728-82385747 | None:intergenic | 35.0% | |
| CGGAGGAAATATAAAATAGG+GGG | + | chr7_3:82385729-82385748 | None:intergenic | 35.0% | |
| TATTTCCTCCGTAATCTGAT+CGG | - | chr7_3:82385738-82385757 | Msa1130280:CDS | 35.0% | |
| TTATGGTCTCTTCTTATGCA+CGG | - | chr7_3:82385916-82385935 | Msa1130280:intron | 35.0% | |
| GACTTGAGTATAAGATTGCT+TGG | + | chr7_3:82386299-82386318 | None:intergenic | 35.0% | |
| TAATCTTCAACTGATGGTTG+TGG | - | chr7_3:82386340-82386359 | Msa1130280:intron | 35.0% | |
| !! | TCTTATCTTGCTTTTCTGGT+AGG | - | chr7_3:82386671-82386690 | Msa1130280:intron | 35.0% |
| ! | TTGAACATATGGGGATTTTC+TGG | + | chr7_3:82386706-82386725 | None:intergenic | 35.0% |
| TGTGTGCAGTTTGAACATAT+GGG | + | chr7_3:82386716-82386735 | None:intergenic | 35.0% | |
| ATATGTTCAAACTGCACACA+GGG | - | chr7_3:82386716-82386735 | Msa1130280:intron | 35.0% | |
| CAATCAGATGTAATGCAGAA+AGG | + | chr7_3:82386792-82386811 | None:intergenic | 35.0% | |
| TGCATTACATCTGATTGCAT+TGG | - | chr7_3:82386795-82386814 | Msa1130280:intron | 35.0% | |
| ! | TAGTATGACTAGCCAACATA+AGG | + | chr7_3:82386922-82386941 | None:intergenic | 35.0% |
| GACATTTACTGAAAAGGTGA+CGG | + | chr7_3:82386949-82386968 | None:intergenic | 35.0% | |
| GAACACTTACAGCAAACATT+GGG | + | chr7_3:82387030-82387049 | None:intergenic | 35.0% | |
| TTATCCTGTCCAATTGTCAT+TGG | + | chr7_3:82387155-82387174 | None:intergenic | 35.0% | |
| TTGATTCATCAAACTCTGAG+AGG | + | chr7_3:82387181-82387200 | None:intergenic | 35.0% | |
| GAGTTTGGTTGACGAATATA+AGG | - | chr7_3:82387214-82387233 | Msa1130280:intron | 35.0% | |
| TCCCCAGATTATATCAAATG+GGG | - | chr7_3:82387245-82387264 | Msa1130280:intron | 35.0% | |
| TCCCCATTTGATATAATCTG+GGG | + | chr7_3:82387249-82387268 | None:intergenic | 35.0% | |
| TTATATCAAATGGGGAATGG+AGG | - | chr7_3:82387253-82387272 | Msa1130280:intron | 35.0% | |
| GATCCGAATAATATGATGAC+AGG | - | chr7_3:82387352-82387371 | Msa1130280:intron | 35.0% | |
| GAATAATATGATGACAGGAG+AGG | - | chr7_3:82387357-82387376 | Msa1130280:intron | 35.0% | |
| !!! | TGGCTCATTTTGAGTTAGAA+AGG | + | chr7_3:82387640-82387659 | None:intergenic | 35.0% |
| AAGATTCTTGTGTACTTGAC+TGG | - | chr7_3:82387669-82387688 | Msa1130280:CDS | 35.0% | |
| TACAGTGGTATTCTGTACTA+CGG | + | chr7_3:82387822-82387841 | None:intergenic | 35.0% | |
| CTGAAAACGAATAACTACAG+TGG | + | chr7_3:82387837-82387856 | None:intergenic | 35.0% | |
| AAAAGCAGAGTGCAATTTGG+CGG | - | chr7_3:82382993-82383012 | Msa1130280:three_prime_UTR | 40.0% | |
| !!! | GCATTTTTTTAGGGTTTCGG+AGG | + | chr7_3:82383180-82383199 | None:intergenic | 40.0% |
| TGAAGTGTGATTATCTCTCG+AGG | + | chr7_3:82383202-82383221 | None:intergenic | 40.0% | |
| AAACAACTCTGTCTCGAACA+TGG | - | chr7_3:82383262-82383281 | Msa1130280:intron | 40.0% | |
| GAACATGGTATCAGCAAAGA+CGG | - | chr7_3:82383277-82383296 | Msa1130280:intron | 40.0% | |
| ! | AAGTCTTATCCCGCTAATTG+AGG | + | chr7_3:82383643-82383662 | None:intergenic | 40.0% |
| TCAATTAGCGGGATAAGACT+TGG | - | chr7_3:82383642-82383661 | Msa1130280:intron | 40.0% | |
| CAATTCCTGTAATCAAGGGA+AGG | - | chr7_3:82383981-82384000 | Msa1130280:CDS | 40.0% | |
| CAAGGGAAGGAATATGTGTA+AGG | - | chr7_3:82383994-82384013 | Msa1130280:CDS | 40.0% | |
| AAGGAATATGTGTAAGGGCA+AGG | - | chr7_3:82384000-82384019 | Msa1130280:CDS | 40.0% | |
| GAAACCAAGAGGAGAAAGAT+CGG | + | chr7_3:82384096-82384115 | None:intergenic | 40.0% | |
| CCCAGTCAGTGTATAAACTA+AGG | + | chr7_3:82384194-82384213 | None:intergenic | 40.0% | |
| ! | TTTATACACTGACTGGGAGT+TGG | - | chr7_3:82384197-82384216 | Msa1130280:intron | 40.0% |
| ATAACTAGAAAGGCCTCAGA+TGG | - | chr7_3:82384445-82384464 | Msa1130280:intron | 40.0% | |
| ! | GGTAGTTTTTGTACAGTACC+TGG | - | chr7_3:82384501-82384520 | Msa1130280:intron | 40.0% |
| CATTATAATCCTGATAGGCC+AGG | - | chr7_3:82384550-82384569 | Msa1130280:intron | 40.0% | |
| GAATCAATTGTGAACCTGTG+TGG | - | chr7_3:82384663-82384682 | Msa1130280:intron | 40.0% | |
| ATGATTGACAGAGAAGCAGA+TGG | - | chr7_3:82384734-82384753 | Msa1130280:intron | 40.0% | |
| CTATGTCATTCAATTGCTGG+AGG | - | chr7_3:82384782-82384801 | Msa1130280:intron | 40.0% | |
| GATGTCCTAAGGCAAATACT+AGG | + | chr7_3:82384839-82384858 | None:intergenic | 40.0% | |
| CTTAAGAACCGACAATTTGC+TGG | - | chr7_3:82384918-82384937 | Msa1130280:intron | 40.0% | |
| TCAAGAGCGGAAATTGAACA+GGG | - | chr7_3:82384956-82384975 | Msa1130280:CDS | 40.0% | |
| CCCATACCTGCATAAATGAA+TGG | + | chr7_3:82385170-82385189 | None:intergenic | 40.0% | |
| GGTCATTCAGAGTCTCTAAA+AGG | + | chr7_3:82385199-82385218 | None:intergenic | 40.0% | |
| TGACCGATACAGCAAAAAAC+TGG | - | chr7_3:82385214-82385233 | Msa1130280:intron | 40.0% | |
| CACTTGTCTCCATTTGGTTA+GGG | + | chr7_3:82385259-82385278 | None:intergenic | 40.0% | |
| TCACTTGTCTCCATTTGGTT+AGG | + | chr7_3:82385260-82385279 | None:intergenic | 40.0% | |
| CAGACATCACAGTAGAAACT+AGG | + | chr7_3:82385433-82385452 | None:intergenic | 40.0% | |
| !! | TCTTGGTGTTGGAATCAAAG+AGG | + | chr7_3:82385516-82385535 | None:intergenic | 40.0% |
| ! | AGAAAATGGCATCTTGGTGT+TGG | + | chr7_3:82385527-82385546 | None:intergenic | 40.0% |
| ATCGGATGATATTTCCTTGC+AGG | - | chr7_3:82385756-82385775 | Msa1130280:CDS | 40.0% | |
| ! | ACGAATTACATTAGCCTGCA+AGG | + | chr7_3:82385773-82385792 | None:intergenic | 40.0% |
| ATTGACATTAAGTTCCTGGC+AGG | - | chr7_3:82385884-82385903 | Msa1130280:intron | 40.0% | |
| CATAATATTCTTTGCCTGCC+AGG | + | chr7_3:82385901-82385920 | None:intergenic | 40.0% | |
| CTGGCAGGCAAAGAATATTA+TGG | - | chr7_3:82385899-82385918 | Msa1130280:intron | 40.0% | |
| !! | TTTAGCTTGGCTAGCATCTT+TGG | + | chr7_3:82385943-82385962 | None:intergenic | 40.0% |
| TCTGAATATCATCCAAGGAG+AGG | - | chr7_3:82385974-82385993 | Msa1130280:intron | 40.0% | |
| GTGTGCAGTTTGAACATATG+GGG | + | chr7_3:82386715-82386734 | None:intergenic | 40.0% | |
| CTGTGTGCAGTTTGAACATA+TGG | + | chr7_3:82386717-82386736 | None:intergenic | 40.0% | |
| CATATGTTCAAACTGCACAC+AGG | - | chr7_3:82386715-82386734 | Msa1130280:intron | 40.0% | |
| GGCTCAGACATTTACTGAAA+AGG | + | chr7_3:82386955-82386974 | None:intergenic | 40.0% | |
| TCCTTCTCAACTTATCGTAC+TGG | + | chr7_3:82386976-82386995 | None:intergenic | 40.0% | |
| GGAACACTTACAGCAAACAT+TGG | + | chr7_3:82387031-82387050 | None:intergenic | 40.0% | |
| CTGATGCTACCAATGACAAT+TGG | - | chr7_3:82387143-82387162 | Msa1130280:intron | 40.0% | |
| GATATAATCTGGGGATTCAC+AGG | + | chr7_3:82387240-82387259 | None:intergenic | 40.0% | |
| ACTCGAAGAAAACCTGCTTA+TGG | + | chr7_3:82387452-82387471 | None:intergenic | 40.0% | |
| !! | GCAATAAGGAAGTGGTTTTG+TGG | - | chr7_3:82387702-82387721 | Msa1130280:CDS | 40.0% |
| !!! | ATAAGGAAGTGGTTTTGTGG+CGG | - | chr7_3:82387705-82387724 | Msa1130280:CDS | 40.0% |
| ACTATTGACACGAAGAATGC+TGG | - | chr7_3:82387943-82387962 | Msa1130280:five_prime_UTR | 40.0% | |
| GGTTGAAAAGTAGAGAGTGG+TGG | - | chr7_3:82383014-82383033 | Msa1130280:three_prime_UTR | 45.0% | |
| ACACTTCAAGTGGGACAATG+CGG | - | chr7_3:82383214-82383233 | Msa1130280:three_prime_UTR | 45.0% | |
| ACCAGATCGGTATGGAATTC+TGG | - | chr7_3:82383239-82383258 | Msa1130280:three_prime_UTR | 45.0% | |
| TCCAGAATTCCATACCGATC+TGG | + | chr7_3:82383243-82383262 | None:intergenic | 45.0% | |
| ! | ACTATTTTACCCATGCTCGC+TGG | - | chr7_3:82383378-82383397 | Msa1130280:intron | 45.0% |
| TTTGTTGCTGATCATGGTGG+TGG | - | chr7_3:82383551-82383570 | Msa1130280:CDS | 45.0% | |
| !! | TGGTGGTGCTGGTAACAATT+GGG | - | chr7_3:82383568-82383587 | Msa1130280:CDS | 45.0% |
| ATGTACCCGACCTCAATTAG+CGG | - | chr7_3:82383630-82383649 | Msa1130280:intron | 45.0% | |
| TTATCCCGCTAATTGAGGTC+GGG | + | chr7_3:82383638-82383657 | None:intergenic | 45.0% | |
| CTTATCCCGCTAATTGAGGT+CGG | + | chr7_3:82383639-82383658 | None:intergenic | 45.0% | |
| AGGGCAAGGTGTATAAGAGA+AGG | - | chr7_3:82384014-82384033 | Msa1130280:CDS | 45.0% | |
| ! | GAGAGGGTGTGAATTATGTG+AGG | - | chr7_3:82384048-82384067 | Msa1130280:intron | 45.0% |
| GGGTGTGAATTATGTGAGGA+TGG | - | chr7_3:82384052-82384071 | Msa1130280:intron | 45.0% | |
| CAATCAATGACTCTGGTGTC+TGG | - | chr7_3:82384313-82384332 | Msa1130280:intron | 45.0% | |
| AAGGTTGACGATGTTCCTGT+CGG | + | chr7_3:82384472-82384491 | None:intergenic | 45.0% | |
| CTCAAGAGCGGAAATTGAAC+AGG | - | chr7_3:82384955-82384974 | Msa1130280:CDS | 45.0% | |
| CAAGAGCGGAAATTGAACAG+GGG | - | chr7_3:82384957-82384976 | Msa1130280:CDS | 45.0% | |
| AAGAGCGGAAATTGAACAGG+GGG | - | chr7_3:82384958-82384977 | Msa1130280:CDS | 45.0% | |
| CAGTGTGTTCCCTAACCAAA+TGG | - | chr7_3:82385247-82385266 | Msa1130280:intron | 45.0% | |
| CCACATCACTTGTCTCCATT+TGG | + | chr7_3:82385265-82385284 | None:intergenic | 45.0% | |
| CCAAATGGAGACAAGTGATG+TGG | - | chr7_3:82385262-82385281 | Msa1130280:intron | 45.0% | |
| AATGGAGACAAGTGATGTGG+TGG | - | chr7_3:82385265-82385284 | Msa1130280:intron | 45.0% | |
| ATAACGAAGAGTGGTTGTGC+TGG | + | chr7_3:82385456-82385475 | None:intergenic | 45.0% | |
| ACAACCACTCTTCGTTATCC+AGG | - | chr7_3:82385458-82385477 | Msa1130280:CDS | 45.0% | |
| GTATCCTGGATAACGAAGAG+TGG | + | chr7_3:82385465-82385484 | None:intergenic | 45.0% | |
| GTGTTGGAATCAAAGAGGCA+AGG | + | chr7_3:82385511-82385530 | None:intergenic | 45.0% | |
| ATCATCCGATCAGATTACGG+AGG | + | chr7_3:82385746-82385765 | None:intergenic | 45.0% | |
| AGGTTCATGAGAGTTTGCAG+AGG | - | chr7_3:82386515-82386534 | Msa1130280:intron | 45.0% | |
| TCGCATACCTGAATACTAGC+AGG | + | chr7_3:82386580-82386599 | None:intergenic | 45.0% | |
| GTATTCAGGTATGCGATCTG+TGG | - | chr7_3:82386584-82386603 | Msa1130280:intron | 45.0% | |
| ! | GCCAGTACGATAAGTTGAGA+AGG | - | chr7_3:82386972-82386991 | Msa1130280:intron | 45.0% |
| TGCTGCATCTGTTCTGTACT+TGG | - | chr7_3:82387085-82387104 | Msa1130280:intron | 45.0% | |
| GCATCTGTTCTGTACTTGGA+TGG | - | chr7_3:82387089-82387108 | Msa1130280:intron | 45.0% | |
| GCTACCAATGACAATTGGAC+AGG | - | chr7_3:82387148-82387167 | Msa1130280:intron | 45.0% | |
| ATCAAATGGGGAATGGAGGT+AGG | - | chr7_3:82387257-82387276 | Msa1130280:intron | 45.0% | |
| TTCTTGTGTACTTGACTGGC+AGG | - | chr7_3:82387673-82387692 | Msa1130280:CDS | 45.0% | |
| AGTGGTATTCTGTACTACGG+CGG | + | chr7_3:82387819-82387838 | None:intergenic | 45.0% | |
| GGCGGTTGAAAAGTAGAGAG+TGG | - | chr7_3:82383011-82383030 | Msa1130280:three_prime_UTR | 50.0% | |
| GGACAATGCGGAAACCAGAT+CGG | - | chr7_3:82383226-82383245 | Msa1130280:three_prime_UTR | 50.0% | |
| ATGCGGAAACCAGATCGGTA+TGG | - | chr7_3:82383231-82383250 | Msa1130280:three_prime_UTR | 50.0% | |
| CCTGAGTAGCGAAATCTTCG+AGG | + | chr7_3:82383306-82383325 | None:intergenic | 50.0% | |
| CCTCGAAGATTTCGCTACTC+AGG | - | chr7_3:82383303-82383322 | Msa1130280:intron | 50.0% | |
| !! | GTGGTGGTGCTGGTAACAAT+TGG | - | chr7_3:82383567-82383586 | Msa1130280:CDS | 50.0% |
| ! | GCTGGTAACAATTGGGCTAG+TGG | - | chr7_3:82383575-82383594 | Msa1130280:CDS | 50.0% |
| ATTGAGGTCGGGTACATGGA+TGG | + | chr7_3:82383627-82383646 | None:intergenic | 50.0% | |
| GCTAATTGAGGTCGGGTACA+TGG | + | chr7_3:82383631-82383650 | None:intergenic | 50.0% | |
| TGTACCCGACCTCAATTAGC+GGG | - | chr7_3:82383631-82383650 | Msa1130280:intron | 50.0% | |
| CAAGAGGAGAAAGATCGGAG+AGG | + | chr7_3:82384091-82384110 | None:intergenic | 50.0% | |
| CTCTCCGATCTTTCTCCTCT+TGG | - | chr7_3:82384089-82384108 | Msa1130280:intron | 50.0% | |
| GACTCTGGTGTCTGGTCTAT+TGG | - | chr7_3:82384321-82384340 | Msa1130280:intron | 50.0% | |
| TGACTAAGACTCCTATGGCC+TGG | + | chr7_3:82384571-82384590 | None:intergenic | 50.0% | |
| AGATGGCAGTGACAGTCTTG+AGG | - | chr7_3:82384751-82384770 | Msa1130280:intron | 50.0% | |
| GATGGCAGTGACAGTCTTGA+GGG | - | chr7_3:82384752-82384771 | Msa1130280:intron | 50.0% | |
| CATTCAATTGCTGGAGGGAC+AGG | - | chr7_3:82384788-82384807 | Msa1130280:intron | 50.0% | |
| AGAGCGGAAATTGAACAGGG+GGG | - | chr7_3:82384959-82384978 | Msa1130280:CDS | 50.0% | |
| AGGATATACGCCTCTGACAG+TGG | - | chr7_3:82385553-82385572 | Msa1130280:CDS | 50.0% | |
| CCTCATGACATCAAGCACAG+TGG | + | chr7_3:82385800-82385819 | None:intergenic | 50.0% | |
| CCACTGTGCTTGATGTCATG+AGG | - | chr7_3:82385797-82385816 | Msa1130280:intron | 50.0% | |
| TGTCATGAGGAGACTTCTGC+AGG | - | chr7_3:82385810-82385829 | Msa1130280:intron | 50.0% | |
| GTTGAGCTCATTTGGTACCG+TGG | - | chr7_3:82386105-82386124 | Msa1130280:intron | 50.0% | |
| ! | GAGGCAAAAGTATGCAGCTG+TGG | + | chr7_3:82386628-82386647 | None:intergenic | 50.0% |
| GTTCAAACTGCACACAGGGT+AGG | - | chr7_3:82386720-82386739 | Msa1130280:intron | 50.0% | |
| ! | TTAGGTCAGCGGCCTTATGT+TGG | - | chr7_3:82386907-82386926 | Msa1130280:intron | 50.0% |
| GGTGACGAGCAATAAGGAAG+TGG | - | chr7_3:82387694-82387713 | Msa1130280:CDS | 50.0% | |
| ACACGAAGAATGCTGGCAAG+TGG | - | chr7_3:82387950-82387969 | Msa1130280:five_prime_UTR | 50.0% | |
| !! | TTGGGCTAGTGGCTACCATC+AGG | - | chr7_3:82383586-82383605 | Msa1130280:CDS | 55.0% |
| TGTTCCTGTCGGACCATCTG+AGG | + | chr7_3:82384461-82384480 | None:intergenic | 55.0% | |
| ATCCTGATAGGCCAGGCCAT+AGG | - | chr7_3:82384557-82384576 | Msa1130280:intron | 55.0% | |
| GAGCGGAAATTGAACAGGGG+GGG | - | chr7_3:82384960-82384979 | Msa1130280:CDS | 55.0% | |
| ACCTGACGTTCCACTGTCAG+AGG | + | chr7_3:82385566-82385585 | None:intergenic | 55.0% | |
| GAGTTGGGTCAACCTCTCCT+TGG | + | chr7_3:82385989-82386008 | None:intergenic | 55.0% | |
| AGGAGAGGTTGACCCAACTC+AGG | - | chr7_3:82385989-82386008 | Msa1130280:intron | 55.0% | |
| GTGGGGTCCTGCTAGTATTC+AGG | - | chr7_3:82386570-82386589 | Msa1130280:intron | 55.0% | |
| GGCACAAGCACAACCCTAGA+AGG | + | chr7_3:82387587-82387606 | None:intergenic | 55.0% | |
| CTGGCAGGTGACGAGCAATA+AGG | - | chr7_3:82387688-82387707 | Msa1130280:CDS | 55.0% | |
| !! | GCTGATCATGGTGGTGGTGC+TGG | - | chr7_3:82383557-82383576 | Msa1130280:CDS | 60.0% |
| AAGGCCTCAGATGGTCCGAC+AGG | - | chr7_3:82384454-82384473 | Msa1130280:intron | 60.0% | |
| CTCCTATGGCCTGGCCTATC+AGG | + | chr7_3:82384562-82384581 | None:intergenic | 60.0% | |
| ATTGCTGGAGGGACAGGCTC+AGG | - | chr7_3:82384794-82384813 | Msa1130280:intron | 60.0% | |
| GCCTCTGACAGTGGAACGTC+AGG | - | chr7_3:82385562-82385581 | Msa1130280:intron | 60.0% | |
| ! | TACCCATGCTCGCTGGCTGC+AGG | - | chr7_3:82383385-82383404 | Msa1130280:intron | 65.0% |
| ! | ACCCATGCTCGCTGGCTGCA+GGG | - | chr7_3:82383386-82383405 | Msa1130280:intron | 65.0% |
| TCCCTGCAGCCAGCGAGCAT+GGG | + | chr7_3:82383390-82383409 | None:intergenic | 65.0% | |
| ACAGGAGAGGGCAGTGCTGC+AGG | - | chr7_3:82387370-82387389 | Msa1130280:intron | 65.0% | |
| GGGCAGTGCTGCAGGATCAC+TGG | - | chr7_3:82387378-82387397 | Msa1130280:intron | 65.0% | |
| CTCCCTGCAGCCAGCGAGCA+TGG | + | chr7_3:82383391-82383410 | None:intergenic | 70.0% | |
| ! | CATGCTCGCTGGCTGCAGGG+AGG | - | chr7_3:82383389-82383408 | Msa1130280:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 82382986 | 82387977 | 82382986 | ID=Msa1130280;Name=Msa1130280 |
| chr7_3 | mRNA | 82382986 | 82387977 | 82382986 | ID=Msa1130280-mRNA-1;Parent=Msa1130280;Name=Msa1130280-mRNA-1;_AED=0.05;_eAED=0.05;_QI=210|0.83|0.76|1|0.66|0.46|13|292|454 |
| chr7_3 | exon | 82382986 | 82383268 | 82382986 | ID=Msa1130280-mRNA-1:exon:24234;Parent=Msa1130280-mRNA-1 |
| chr7_3 | exon | 82383534 | 82383611 | 82383534 | ID=Msa1130280-mRNA-1:exon:24233;Parent=Msa1130280-mRNA-1 |
| chr7_3 | exon | 82383689 | 82383793 | 82383689 | ID=Msa1130280-mRNA-1:exon:24232;Parent=Msa1130280-mRNA-1 |
| chr7_3 | exon | 82383924 | 82384052 | 82383924 | ID=Msa1130280-mRNA-1:exon:24231;Parent=Msa1130280-mRNA-1 |
| chr7_3 | exon | 82384226 | 82384270 | 82384226 | ID=Msa1130280-mRNA-1:exon:24230;Parent=Msa1130280-mRNA-1 |
| chr7_3 | exon | 82384372 | 82384446 | 82384372 | ID=Msa1130280-mRNA-1:exon:24229;Parent=Msa1130280-mRNA-1 |
| chr7_3 | exon | 82384953 | 82385057 | 82384953 | ID=Msa1130280-mRNA-1:exon:24228;Parent=Msa1130280-mRNA-1 |
| chr7_3 | exon | 82385132 | 82385185 | 82385132 | ID=Msa1130280-mRNA-1:exon:24227;Parent=Msa1130280-mRNA-1 |
| chr7_3 | exon | 82385380 | 82385574 | 82385380 | ID=Msa1130280-mRNA-1:exon:24226;Parent=Msa1130280-mRNA-1 |
| chr7_3 | exon | 82385581 | 82385780 | 82385581 | ID=Msa1130280-mRNA-1:exon:24225;Parent=Msa1130280-mRNA-1 |
| chr7_3 | exon | 82386148 | 82386259 | 82386148 | ID=Msa1130280-mRNA-1:exon:24224;Parent=Msa1130280-mRNA-1 |
| chr7_3 | exon | 82387410 | 82387556 | 82387410 | ID=Msa1130280-mRNA-1:exon:24223;Parent=Msa1130280-mRNA-1 |
| chr7_3 | exon | 82387639 | 82387977 | 82387639 | ID=Msa1130280-mRNA-1:exon:24222;Parent=Msa1130280-mRNA-1 |
| chr7_3 | five_prime_UTR | 82387768 | 82387977 | 82387768 | ID=Msa1130280-mRNA-1:five_prime_utr;Parent=Msa1130280-mRNA-1 |
| chr7_3 | CDS | 82387639 | 82387767 | 82387639 | ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1 |
| chr7_3 | CDS | 82387410 | 82387556 | 82387410 | ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1 |
| chr7_3 | CDS | 82386148 | 82386259 | 82386148 | ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1 |
| chr7_3 | CDS | 82385581 | 82385780 | 82385581 | ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1 |
| chr7_3 | CDS | 82385380 | 82385574 | 82385380 | ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1 |
| chr7_3 | CDS | 82385132 | 82385185 | 82385132 | ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1 |
| chr7_3 | CDS | 82384953 | 82385057 | 82384953 | ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1 |
| chr7_3 | CDS | 82384372 | 82384446 | 82384372 | ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1 |
| chr7_3 | CDS | 82384226 | 82384270 | 82384226 | ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1 |
| chr7_3 | CDS | 82383924 | 82384052 | 82383924 | ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1 |
| chr7_3 | CDS | 82383689 | 82383793 | 82383689 | ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1 |
| chr7_3 | CDS | 82383543 | 82383611 | 82383543 | ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1 |
| chr7_3 | three_prime_UTR | 82383534 | 82383542 | 82383534 | ID=Msa1130280-mRNA-1:three_prime_utr;Parent=Msa1130280-mRNA-1 |
| chr7_3 | three_prime_UTR | 82382986 | 82383268 | 82382986 | ID=Msa1130280-mRNA-1:three_prime_utr;Parent=Msa1130280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
