AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1130280


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1130280 MtrunA17_Chr7g0275431 95.781 474 0 2 1 454 1 474 0.0 932
Msa1130280 MtrunA17_Chr4g0007371 34.247 438 253 9 3 419 2 425 2.30e-77 248
Msa1130280 MtrunA17_Chr8g0386781 33.486 436 257 8 3 419 2 423 2.42e-77 248
Msa1130280 MtrunA17_Chr4g0008401 33.486 436 257 8 3 419 2 423 3.45e-77 247
Msa1130280 MtrunA17_Chr1g0203181 33.486 436 257 8 3 419 2 423 4.64e-77 247
Msa1130280 MtrunA17_Chr4g0008361 33.486 436 257 8 3 419 2 423 5.75e-77 247
Msa1130280 MtrunA17_Chr2g0292921 33.486 436 257 8 3 419 2 423 9.09e-77 246
Msa1130280 MtrunA17_Chr3g0142731 34.014 441 250 10 3 419 2 425 1.87e-76 246
Msa1130280 MtrunA17_Chr4g0051631 33.486 436 257 8 3 419 2 423 2.54e-76 245
Msa1130280 MtrunA17_Chr8g0393021 33.410 437 257 9 3 419 2 424 9.15e-76 244
Msa1130280 MtrunA17_Chr7g0255791 33.257 436 258 8 3 419 2 423 5.75e-75 241
Msa1130280 MtrunA17_Chr7g0253411 30.700 443 270 8 3 419 2 433 8.43e-65 215
Msa1130280 MtrunA17_Chr4g0054511 30.856 444 268 9 3 419 2 433 1.04e-62 209
Msa1130280 MtrunA17_Chr8g0378821 29.571 443 275 8 3 419 2 433 2.07e-62 209
Msa1130280 MtrunA17_Chr6g0461281 30.700 443 269 8 3 418 2 433 2.19e-62 209
Msa1130280 MtrunA17_Chr3g0140821 30.856 444 268 9 3 419 2 433 3.10e-62 208
Msa1130280 MtrunA17_Chr1g0206881 30.631 444 269 9 3 419 2 433 9.15e-62 207
Msa1130280 MtrunA17_Chr2g0300671 29.638 442 271 10 3 419 2 428 1.11e-48 172
Msa1130280 MtrunA17_Chr2g0300491 28.733 442 275 10 3 419 2 428 1.80e-46 167
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1130280 AT3G61650.1 92.144 471 17 2 1 451 1 471 0.0 898
Msa1130280 AT5G05620.1 91.507 471 20 2 1 451 1 471 0.0 893
Msa1130280 AT5G44340.1 34.404 436 253 8 3 419 2 423 3.15e-79 253
Msa1130280 AT4G20890.1 33.945 436 255 8 3 419 2 423 1.86e-78 251
Msa1130280 AT5G23860.2 33.716 436 256 8 3 419 2 423 2.35e-77 248
Msa1130280 AT5G23860.1 33.716 436 256 8 3 419 2 423 2.35e-77 248
Msa1130280 AT2G29550.1 34.174 436 254 8 3 419 2 423 2.85e-77 248
Msa1130280 AT1G75780.1 34.325 437 253 9 3 419 2 424 1.22e-76 246
Msa1130280 AT5G62690.1 33.486 436 257 8 3 419 2 423 3.83e-76 245
Msa1130280 AT5G62700.1 33.486 436 257 8 3 419 2 423 3.83e-76 245
Msa1130280 AT1G20010.1 34.325 437 253 9 3 419 2 424 5.02e-76 245
Msa1130280 AT5G12250.1 33.486 436 257 8 3 419 2 423 2.26e-75 243
Msa1130280 AT1G64740.1 29.345 443 276 8 3 419 2 433 1.92e-62 209
Msa1130280 AT5G19780.1 29.797 443 274 8 3 419 2 433 2.42e-62 209
Msa1130280 AT5G19770.1 29.797 443 274 8 3 419 2 433 2.42e-62 209
Msa1130280 AT4G14960.2 30.631 444 269 9 3 419 2 433 6.11e-62 208
Msa1130280 AT1G50010.1 30.856 444 268 9 3 419 2 433 8.03e-62 207
Msa1130280 AT1G04820.1 30.856 444 268 9 3 419 2 433 8.03e-62 207
Msa1130280 AT4G14960.1 32.249 369 220 7 3 349 2 362 4.14e-55 189

Find 124 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTCATACTACTGATTT+TGG 0.178192 7_3:+82383538 None:intergenic
CTTTCTGTAGTTGTCTAAAA+AGG 0.228088 7_3:+82383939 None:intergenic
TTGGAACCAAGGGTTATTAA+TGG 0.245426 7_3:-82387459 Msa1130280:CDS
TTTAGCTTGGCTAGCATCTT+TGG 0.260486 7_3:+82385001 None:intergenic
AAGAGACATTATTGAGAGTT+TGG 0.287511 7_3:-82383742 Msa1130280:CDS
ATTCCCCATTTGATATAATC+TGG 0.291812 7_3:+82383693 None:intergenic
CCGTGCTTTATTGATTGATT+TGG 0.301583 7_3:-82387478 Msa1130280:CDS
GTTCTATGTCATTCAATTGC+TGG 0.305453 7_3:-82386162 Msa1130280:CDS
ACCAGATCGGTATGGAATTC+TGG 0.309683 7_3:-82387702 Msa1130280:CDS
GTATATGGTTGGTTTGTTAT+TGG 0.315591 7_3:-82383080 Msa1130280:three_prime_UTR
TATATCCTGTCATTAGAAAA+TGG 0.320239 7_3:+82385403 None:intergenic
TGTATTGTTTGTTTATCATT+TGG 0.325442 7_3:-82383152 Msa1130280:three_prime_UTR
GAGTTTGGTTGACGAATATA+AGG 0.328007 7_3:-82383727 Msa1130280:CDS
TCACTTGTCTCCATTTGGTT+AGG 0.344251 7_3:+82385684 None:intergenic
CCACATCACTTGTCTCCATT+TGG 0.361567 7_3:+82385679 None:intergenic
GTGGGGTCCTGCTAGTATTC+AGG 0.370913 7_3:-82384371 Msa1130280:intron
TCTCATGATTGTAAAGATTA+CGG 0.376121 7_3:+82387418 None:intergenic
GGTCATTCAGAGTCTCTAAA+AGG 0.387096 7_3:+82385745 None:intergenic
AATATTGTCATTACCTGAGT+TGG 0.398405 7_3:+82384939 None:intergenic
AATCCCCAGATTATATCAAA+TGG 0.399374 7_3:-82383698 Msa1130280:CDS
CTGTGTGCAGTTTGAACATA+TGG 0.400407 7_3:+82384227 None:intergenic
AAGAAAAGCAGAGTGCAATT+TGG 0.403095 7_3:-82387951 Msa1130280:five_prime_UTR
CACTAACAATAGAATAGAAA+TGG 0.404089 7_3:+82387822 None:intergenic
GAATGTTGAAGAAGACATAA+TGG 0.419103 7_3:-82386232 Msa1130280:CDS
TCTCCTGTCATCATATTATT+CGG 0.421502 7_3:+82383586 None:intergenic
CTGGCAGGTGACGAGCAATA+AGG 0.421976 7_3:-82383253 Msa1130280:intron
ACAGGAGAGGGCAGTGCTGC+AGG 0.426001 7_3:-82383571 Msa1130280:CDS
TCCTTCTCAACTTATCGTAC+TGG 0.427815 7_3:+82383968 None:intergenic
CTGGCAGGCAAAGAATATTA+TGG 0.438413 7_3:-82385042 Msa1130280:intron
CACTTGTCTCCATTTGGTTA+GGG 0.438949 7_3:+82385685 None:intergenic
CATTCAATTGCTGGAGGGAC+AGG 0.443706 7_3:-82386153 Msa1130280:CDS
TCCAGAATTCCATACCGATC+TGG 0.449492 7_3:+82387701 None:intergenic
ATTGCTGGAGGGACAGGCTC+AGG 0.449849 7_3:-82386147 Msa1130280:intron
GCCTCTGACAGTGGAACGTC+AGG 0.450901 7_3:-82385379 Msa1130280:intron
GAATTTGTTTGAGCAAATGT+TGG 0.452915 7_3:+82385534 None:intergenic
ATCCCCAGATTATATCAAAT+GGG 0.456784 7_3:-82383697 Msa1130280:CDS
GGGCAGTGCTGCAGGATCAC+TGG 0.459086 7_3:-82383563 Msa1130280:CDS
TGAATTCCATTAATAACCCT+TGG 0.461984 7_3:+82387453 None:intergenic
GGCTCAGACATTTACTGAAA+AGG 0.462594 7_3:+82383989 None:intergenic
GATATAATCTGGGGATTCAC+AGG 0.462754 7_3:+82383704 None:intergenic
CAGACATCACAGTAGAAACT+AGG 0.469353 7_3:+82385511 None:intergenic
GTCATTAGAAAATGGCATCT+TGG 0.471437 7_3:+82385411 None:intergenic
CAGTGTGTTCCCTAACCAAA+TGG 0.473529 7_3:-82385694 Msa1130280:CDS
TTCCCCATTTGATATAATCT+GGG 0.474962 7_3:+82383694 None:intergenic
AAGTCATTATTCATGTATCC+TGG 0.481660 7_3:+82385465 None:intergenic
GCTAGTTAACTTTATTGAGT+GGG 0.483561 7_3:-82384389 Msa1130280:CDS
ATATTGTCATTACCTGAGTT+GGG 0.490303 7_3:+82384940 None:intergenic
AGAAAATGGCATCTTGGTGT+TGG 0.491952 7_3:+82385417 None:intergenic
CCTGAGTAGCGAAATCTTCG+AGG 0.493935 7_3:+82387638 None:intergenic
AGAATTTCTTTGTTTAGTAG+TGG 0.496021 7_3:+82387857 None:intergenic
CAAATCAATCAATAAAGCAC+GGG 0.496031 7_3:+82387479 None:intergenic
AGTGTCAAAAGTGAGTTATA+TGG 0.497975 7_3:+82385648 None:intergenic
GAACACTTACAGCAAACATT+GGG 0.502913 7_3:+82383914 None:intergenic
CCTCGAAGATTTCGCTACTC+AGG 0.506650 7_3:-82387638 Msa1130280:intron
GAGTTGGGTCAACCTCTCCT+TGG 0.508239 7_3:+82384955 None:intergenic
TTAGGTCAGCGGCCTTATGT+TGG 0.508961 7_3:-82384034 Msa1130280:intron
GATGGCAGTGACAGTCTTGA+GGG 0.509882 7_3:-82386189 Msa1130280:CDS
GGAACACTTACAGCAAACAT+TGG 0.511079 7_3:+82383913 None:intergenic
GAATTGATATATATTTAGCT+TGG 0.513871 7_3:+82384988 None:intergenic
TCTTAATGCTGATTGTGTTG+TGG 0.515975 7_3:-82385613 Msa1130280:CDS
ATTGATTGATTTGGAACCAA+GGG 0.524085 7_3:-82387469 Msa1130280:CDS
TAGTATGACTAGCCAACATA+AGG 0.524461 7_3:+82384022 None:intergenic
ACAACCACTCTTCGTTATCC+AGG 0.524939 7_3:-82385483 Msa1130280:CDS
GATCCGAATAATATGATGAC+AGG 0.524991 7_3:-82383589 Msa1130280:CDS
AGGATATACGCCTCTGACAG+TGG 0.526564 7_3:-82385388 Msa1130280:CDS
ACTATTGACACGAAGAATGC+TGG 0.527775 7_3:-82382998 Msa1130280:three_prime_UTR
AAAAGCAGAGTGCAATTTGG+CGG 0.543842 7_3:-82387948 Msa1130280:five_prime_UTR
TACAGTGGTATTCTGTACTA+CGG 0.545684 7_3:+82383122 None:intergenic
AGATTATATCAAATGGGGAA+TGG 0.549783 7_3:-82383691 Msa1130280:CDS
AGCTAGTTAACTTTATTGAG+TGG 0.551550 7_3:-82384390 Msa1130280:CDS
GGCGGTTGAAAAGTAGAGAG+TGG 0.555759 7_3:-82387930 Msa1130280:five_prime_UTR
AATAATATGATGACAGGAGA+GGG 0.566951 7_3:-82383583 Msa1130280:CDS
AGATGGCAGTGACAGTCTTG+AGG 0.567168 7_3:-82386190 Msa1130280:CDS
CTAGTTAACTTTATTGAGTG+GGG 0.569176 7_3:-82384388 Msa1130280:CDS
TGTCATGAGGAGACTTCTGC+AGG 0.571604 7_3:-82385131 Msa1130280:intron
ACCTGACGTTCCACTGTCAG+AGG 0.573775 7_3:+82385378 None:intergenic
AGAGATAATCACACTTCAAG+TGG 0.576431 7_3:-82387737 Msa1130280:CDS
ATGCGGAAACCAGATCGGTA+TGG 0.576564 7_3:-82387710 Msa1130280:CDS
CCAAATCAATCAATAAAGCA+CGG 0.577216 7_3:+82387478 None:intergenic
TTATGGTCTCTTCTTATGCA+CGG 0.578464 7_3:-82385025 Msa1130280:CDS
CTATGTCATTCAATTGCTGG+AGG 0.585953 7_3:-82386159 Msa1130280:CDS
TCCCCATTTGATATAATCTG+GGG 0.589500 7_3:+82383695 None:intergenic
TCGCATACCTGAATACTAGC+AGG 0.597022 7_3:+82384364 None:intergenic
GGTGACGAGCAATAAGGAAG+TGG 0.600143 7_3:-82383247 Msa1130280:three_prime_UTR
ATAACGAAGAGTGGTTGTGC+TGG 0.603190 7_3:+82385488 None:intergenic
AGGAGAGGTTGACCCAACTC+AGG 0.603351 7_3:-82384952 Msa1130280:intron
ATATGTTCAAACTGCACACA+GGG 0.604079 7_3:-82384225 Msa1130280:intron
TCAATTCTGAATATCATCCA+AGG 0.606426 7_3:-82384972 Msa1130280:CDS
AGACATCACAGTAGAAACTA+GGG 0.607333 7_3:+82385512 None:intergenic
GCCAGTACGATAAGTTGAGA+AGG 0.608803 7_3:-82383969 Msa1130280:CDS
GACATTTACTGAAAAGGTGA+CGG 0.609104 7_3:+82383995 None:intergenic
TATTGATTGATTTGGAACCA+AGG 0.610327 7_3:-82387470 Msa1130280:CDS
TCAAAAGTGAGTTATATGGT+TGG 0.610753 7_3:+82385652 None:intergenic
GAACATGGTATCAGCAAAGA+CGG 0.611540 7_3:-82387664 Msa1130280:CDS
GGACAATGCGGAAACCAGAT+CGG 0.618984 7_3:-82387715 Msa1130280:CDS
GAGATAATCACACTTCAAGT+GGG 0.619478 7_3:-82387736 Msa1130280:CDS
AGGATACATGAATAATGACT+TGG 0.619688 7_3:-82385463 Msa1130280:CDS
AAACAACTCTGTCTCGAACA+TGG 0.619782 7_3:-82387679 Msa1130280:CDS
ATGATTGACAGAGAAGCAGA+TGG 0.626844 7_3:-82386207 Msa1130280:CDS
TACATGAATAATGACTTGGT+TGG 0.628614 7_3:-82385459 Msa1130280:CDS
CATATGTTCAAACTGCACAC+AGG 0.630458 7_3:-82384226 Msa1130280:CDS
GTGTTGGAATCAAAGAGGCA+AGG 0.634632 7_3:+82385433 None:intergenic
TCCCCAGATTATATCAAATG+GGG 0.635043 7_3:-82383696 Msa1130280:CDS
TTATATCAAATGGGGAATGG+AGG 0.637675 7_3:-82383688 Msa1130280:intron
TGTGTGCAGTTTGAACATAT+GGG 0.640655 7_3:+82384228 None:intergenic
GTGTGCAGTTTGAACATATG+GGG 0.646116 7_3:+82384229 None:intergenic
TATGTCATTCAATTGCTGGA+GGG 0.647449 7_3:-82386158 Msa1130280:CDS
TCTGAATATCATCCAAGGAG+AGG 0.649229 7_3:-82384967 Msa1130280:CDS
TTGATTCATCAAACTCTGAG+AGG 0.650287 7_3:+82383763 None:intergenic
TGAAGTGTGATTATCTCTCG+AGG 0.657196 7_3:+82387742 None:intergenic
GAATAATATGATGACAGGAG+AGG 0.675044 7_3:-82383584 Msa1130280:CDS
TCTTGGTGTTGGAATCAAAG+AGG 0.676873 7_3:+82385428 None:intergenic
ACACGAAGAATGCTGGCAAG+TGG 0.679689 7_3:-82382991 Msa1130280:three_prime_UTR
AGGTTCATGAGAGTTTGCAG+AGG 0.683623 7_3:-82384426 Msa1130280:CDS
GGTTGAAAAGTAGAGAGTGG+TGG 0.684934 7_3:-82387927 Msa1130280:five_prime_UTR
CTGAAAACGAATAACTACAG+TGG 0.686210 7_3:+82383107 None:intergenic
GTATCCTGGATAACGAAGAG+TGG 0.693788 7_3:+82385479 None:intergenic
CCACTGTGCTTGATGTCATG+AGG 0.693936 7_3:-82385144 Msa1130280:CDS
AAATCAATCAATAAAGCACG+GGG 0.701160 7_3:+82387480 None:intergenic
ACACTTCAAGTGGGACAATG+CGG 0.701458 7_3:-82387727 Msa1130280:CDS
AATGGAGACAAGTGATGTGG+TGG 0.707586 7_3:-82385676 Msa1130280:CDS
CCAAATGGAGACAAGTGATG+TGG 0.730166 7_3:-82385679 Msa1130280:CDS
CCTCATGACATCAAGCACAG+TGG 0.730325 7_3:+82385144 None:intergenic
AGTGGTATTCTGTACTACGG+CGG 0.750261 7_3:+82383125 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATAAATAAAATTGCAA+GGG + chr7_3:82384426-82384445 None:intergenic 10.0%
!! ATATAATAAATAAAATTGCA+AGG + chr7_3:82384427-82384446 None:intergenic 10.0%
!! TATTTATTATATAACTAGAA+AGG - chr7_3:82384435-82384454 Msa1130280:intron 10.0%
!!! AAATAATTTTAAAAAAACAC+AGG + chr7_3:82385115-82385134 None:intergenic 10.0%
!!! ATAGTTTAACATATATTTTT+AGG - chr7_3:82386820-82386839 Msa1130280:intron 10.0%
!!! TTTATATTTTTTCTTTGTAT+AGG - chr7_3:82387330-82387349 Msa1130280:intron 10.0%
!!! TATTTTTTTAGATATTTGTT+GGG + chr7_3:82387905-82387924 None:intergenic 10.0%
!!! ATATTTTTTTAGATATTTGT+TGG + chr7_3:82387906-82387925 None:intergenic 10.0%
!!! TTTTCATTTCAATTTCAAAA+AGG - chr7_3:82383148-82383167 Msa1130280:three_prime_UTR 15.0%
!! TTGTAGAATATTTAATAACT+AGG + chr7_3:82383905-82383924 None:intergenic 15.0%
!!! TCAACTATTTTAAAATGTAA+GGG - chr7_3:82384588-82384607 Msa1130280:intron 15.0%
!! AAATTCTCAATAAAGTTAAA+GGG + chr7_3:82384883-82384902 None:intergenic 15.0%
!!! AGATTAATTTCAATTTTTCA+AGG + chr7_3:82386326-82386345 None:intergenic 15.0%
!!! TTAACATATATTTTTAGGAA+TGG - chr7_3:82386825-82386844 Msa1130280:intron 15.0%
!! TGAAAATATTGATATGAAAT+TGG + chr7_3:82387052-82387071 None:intergenic 15.0%
!!! ATTTTTTATTTATCTTGCTA+GGG + chr7_3:82387499-82387518 None:intergenic 15.0%
!!! ATTATGAAAACTTTCTTTTT+TGG - chr7_3:82387733-82387752 Msa1130280:CDS 15.0%
!! AACTACAAATAACAAACAAA+TGG + chr7_3:82383712-82383731 None:intergenic 20.0%
!!! GTCAACTATTTTAAAATGTA+AGG - chr7_3:82384587-82384606 Msa1130280:intron 20.0%
!! AATTCTCAATAAAGTTAAAG+GGG + chr7_3:82384882-82384901 None:intergenic 20.0%
!! CAAATTCTCAATAAAGTTAA+AGG + chr7_3:82384884-82384903 None:intergenic 20.0%
!! GAATTGATATATATTTAGCT+TGG + chr7_3:82385956-82385975 None:intergenic 20.0%
!! TCTTCTATTAAAAAATACCA+CGG + chr7_3:82386125-82386144 None:intergenic 20.0%
!!! TGGTATTTTTTAATAGAAGA+TGG - chr7_3:82386125-82386144 Msa1130280:intron 20.0%
!! ATCATAATACAGTTTAGAAA+GGG + chr7_3:82386474-82386493 None:intergenic 20.0%
!! AATCATAATACAGTTTAGAA+AGG + chr7_3:82386475-82386494 None:intergenic 20.0%
!!! TATGATTTTAATGTTCTCTA+TGG - chr7_3:82386488-82386507 Msa1130280:intron 20.0%
!! GATAAGCATAAAAATTAAGA+CGG + chr7_3:82386766-82386785 None:intergenic 20.0%
!! CCTAATAATAATATCTTACT+TGG + chr7_3:82387429-82387448 None:intergenic 20.0%
!! CCAAGTAAGATATTATTATT+AGG - chr7_3:82387426-82387445 Msa1130280:CDS 20.0%
!!! TTTTTTATTTATCTTGCTAG+GGG + chr7_3:82387498-82387517 None:intergenic 20.0%
!!! CATTTTTTATTTATCTTGCT+AGG + chr7_3:82387500-82387519 None:intergenic 20.0%
!! TGAAATATGAATGTTAAATG+TGG - chr7_3:82387518-82387537 Msa1130280:CDS 20.0%
!! TGTATTGTTTGTTTATCATT+TGG - chr7_3:82387789-82387808 Msa1130280:five_prime_UTR 20.0%
!! AGAATTTCTTTGTTTAGTAG+TGG + chr7_3:82383087-82383106 None:intergenic 25.0%
! CACTAACAATAGAATAGAAA+TGG + chr7_3:82383122-82383141 None:intergenic 25.0%
! TCTCATGATTGTAAAGATTA+CGG + chr7_3:82383526-82383545 None:intergenic 25.0%
!!! AATATTTTTGTTGCTGATCA+TGG - chr7_3:82383545-82383564 Msa1130280:CDS 25.0%
! CTTCACATGAAAAAACATAA+AGG - chr7_3:82384382-82384401 Msa1130280:CDS 25.0%
! TGAAAAAACATAAAGGTTGA+AGG - chr7_3:82384389-82384408 Msa1130280:CDS 25.0%
! GAAAAAACATAAAGGTTGAA+GGG - chr7_3:82384390-82384409 Msa1130280:CDS 25.0%
! CATTTAAAAAACACAAAACC+AGG + chr7_3:82384522-82384541 None:intergenic 25.0%
! ATTCTCAATAAAGTTAAAGG+GGG + chr7_3:82384881-82384900 None:intergenic 25.0%
! ATTAATTTCCAGCAAATTGT+CGG + chr7_3:82384929-82384948 None:intergenic 25.0%
!!! AAATTGCTTTTAACGCATAA+TGG - chr7_3:82385010-82385029 Msa1130280:CDS 25.0%
! TCTTAAATATAGGAAGTCAA+AGG + chr7_3:82385060-82385079 None:intergenic 25.0%
! TTGACTTCCTATATTTAAGA+TGG - chr7_3:82385060-82385079 Msa1130280:intron 25.0%
! AGGTTATCCATCTTAAATAT+AGG + chr7_3:82385070-82385089 None:intergenic 25.0%
! GTGAGAAATATTTAAGCAAT+CGG + chr7_3:82385093-82385112 None:intergenic 25.0%
! TATATCCTGTCATTAGAAAA+TGG + chr7_3:82385541-82385560 None:intergenic 25.0%
!!! TGCTCGAAATATCATTTTTA+TGG + chr7_3:82385610-82385629 None:intergenic 25.0%
! TCTTTACAGGACAAAAATTT+AGG + chr7_3:82385644-82385663 None:intergenic 25.0%
! TACGGAGGAAATATAAAATA+GGG + chr7_3:82385731-82385750 None:intergenic 25.0%
! TTACGGAGGAAATATAAAAT+AGG + chr7_3:82385732-82385751 None:intergenic 25.0%
! TGAAATTAATCTTCAACTGA+TGG - chr7_3:82386334-82386353 Msa1130280:intron 25.0%
! TTAATGTTCTCTATGGATTT+AGG - chr7_3:82386495-82386514 Msa1130280:intron 25.0%
! CATCAAACTAAATATGAAAG+AGG + chr7_3:82386647-82386666 None:intergenic 25.0%
! AAACAAAAAAATGAAAAGCG+AGG + chr7_3:82387293-82387312 None:intergenic 25.0%
!!! TTTCTTCATACTACTGATTT+TGG + chr7_3:82387406-82387425 None:intergenic 25.0%
!! ATTAGTTTACTTTCCTTCTA+GGG - chr7_3:82387571-82387590 Msa1130280:intron 25.0%
! ACAAGAATCTTAGACATTTA+TGG + chr7_3:82387660-82387679 None:intergenic 25.0%
!!! TGAAAACTTTCTTTTTTGGA+TGG - chr7_3:82387737-82387756 Msa1130280:CDS 25.0%
!! TTCGTTTTCAGTAATGTATA+TGG - chr7_3:82387846-82387865 Msa1130280:five_prime_UTR 25.0%
!! TTTTCAGTAATGTATATGGT+TGG - chr7_3:82387850-82387869 Msa1130280:five_prime_UTR 25.0%
AAATCAATCAATAAAGCACG+GGG + chr7_3:82383464-82383483 None:intergenic 30.0%
CAAATCAATCAATAAAGCAC+GGG + chr7_3:82383465-82383484 None:intergenic 30.0%
CCAAATCAATCAATAAAGCA+CGG + chr7_3:82383466-82383485 None:intergenic 30.0%
!! TATTGATTGATTTGGAACCA+AGG - chr7_3:82383471-82383490 Msa1130280:intron 30.0%
!! ATTGATTGATTTGGAACCAA+GGG - chr7_3:82383472-82383491 Msa1130280:intron 30.0%
TGAATTCCATTAATAACCCT+TGG + chr7_3:82383491-82383510 None:intergenic 30.0%
ATTAAAGTAAGCATACCTGA+TGG + chr7_3:82383604-82383623 None:intergenic 30.0%
AGTTCTCAATAACATAAGTC+TGG - chr7_3:82383827-82383846 Msa1130280:intron 30.0%
! GATTTTCTTTAGCATGCTAA+TGG - chr7_3:82383856-82383875 Msa1130280:intron 30.0%
TCAGCAAAATTAGTAGTGAA+TGG - chr7_3:82383935-82383954 Msa1130280:CDS 30.0%
AGAAGGAATAGAAATTAGAG+AGG - chr7_3:82384031-82384050 Msa1130280:CDS 30.0%
GAAGGAATAGAAATTAGAGA+GGG - chr7_3:82384032-82384051 Msa1130280:CDS 30.0%
AAATAAAGAAGGAAACCAAG+AGG + chr7_3:82384107-82384126 None:intergenic 30.0%
GAGAACTGGAAAAATAAAGA+AGG + chr7_3:82384118-82384137 None:intergenic 30.0%
ACTAGAGACTGAATACATAA+AGG + chr7_3:82384140-82384159 None:intergenic 30.0%
! AGTGTCTTTTGCTTGTAAAT+TGG - chr7_3:82384157-82384176 Msa1130280:intron 30.0%
TCAAATTCAATCAATGACTC+TGG - chr7_3:82384306-82384325 Msa1130280:intron 30.0%
AAAAACTACCGTATTATGGA+AGG + chr7_3:82384491-82384510 None:intergenic 30.0%
GTACAAAAACTACCGTATTA+TGG + chr7_3:82384495-82384514 None:intergenic 30.0%
TTGCACATTATAATCCTGAT+AGG - chr7_3:82384545-82384564 Msa1130280:intron 30.0%
! TGAGTGATGAGTTACATTTT+TGG - chr7_3:82384635-82384654 Msa1130280:intron 30.0%
TGGTTGTTAATATCTGATCA+GGG - chr7_3:82384683-82384702 Msa1130280:intron 30.0%
GAATGTTGAAGAAGACATAA+TGG - chr7_3:82384709-82384728 Msa1130280:intron 30.0%
! TTTTTCCTAGTATTTGCCTT+AGG - chr7_3:82384831-82384850 Msa1130280:intron 30.0%
GAAACTTATATGATGTCCTA+AGG + chr7_3:82384850-82384869 None:intergenic 30.0%
ATTAATCTTACACTCAAGAG+CGG - chr7_3:82384943-82384962 Msa1130280:intron 30.0%
AGAAATATTTAAGCAATCGG+AGG + chr7_3:82385090-82385109 None:intergenic 30.0%
GTTATTCCATTCATTTATGC+AGG - chr7_3:82385161-82385180 Msa1130280:CDS 30.0%
TCAAAAGTGAGTTATATGGT+TGG + chr7_3:82385292-82385311 None:intergenic 30.0%
AGTGTCAAAAGTGAGTTATA+TGG + chr7_3:82385296-82385315 None:intergenic 30.0%
! GAATTTGTTTGAGCAAATGT+TGG + chr7_3:82385410-82385429 None:intergenic 30.0%
AAGTCATTATTCATGTATCC+TGG + chr7_3:82385479-82385498 None:intergenic 30.0%
AGGATACATGAATAATGACT+TGG - chr7_3:82385478-82385497 Msa1130280:CDS 30.0%
!! TACATGAATAATGACTTGGT+TGG - chr7_3:82385482-82385501 Msa1130280:CDS 30.0%
TTATGGAGAAAATGACACAA+AGG + chr7_3:82385593-82385612 None:intergenic 30.0%
CAAAACAACAGAATCTTTAC+AGG + chr7_3:82385657-82385676 None:intergenic 30.0%
!!! ATTCTGTTGTTTTGTTGAAC+TGG - chr7_3:82385663-82385682 Msa1130280:CDS 30.0%
ACGGAGGAAATATAAAATAG+GGG + chr7_3:82385730-82385749 None:intergenic 30.0%
AATATCATCCGATCAGATTA+CGG + chr7_3:82385749-82385768 None:intergenic 30.0%
TTCTATTGACATTAAGTTCC+TGG - chr7_3:82385880-82385899 Msa1130280:intron 30.0%
TCAATTCTGAATATCATCCA+AGG - chr7_3:82385969-82385988 Msa1130280:intron 30.0%
ATATTGTCATTACCTGAGTT+GGG + chr7_3:82386004-82386023 None:intergenic 30.0%
AATATTGTCATTACCTGAGT+TGG + chr7_3:82386005-82386024 None:intergenic 30.0%
ACTCAGTTTCAGTTAACAAA+TGG + chr7_3:82386059-82386078 None:intergenic 30.0%
AACTGAAACTGAGTTACAAA+AGG - chr7_3:82386065-82386084 Msa1130280:intron 30.0%
AAATGAGCTCAACAAATGAA+TGG + chr7_3:82386098-82386117 None:intergenic 30.0%
! ATTCATTTGTTGAGCTCATT+TGG - chr7_3:82386097-82386116 Msa1130280:intron 30.0%
!!! ATTTCTTTTTCAGCTTCTAC+TGG - chr7_3:82386206-82386225 Msa1130280:CDS 30.0%
ATGTGACGTTAATTAGAAGA+AGG + chr7_3:82386255-82386274 None:intergenic 30.0%
AGCTAGTTAACTTTATTGAG+TGG - chr7_3:82386551-82386570 Msa1130280:intron 30.0%
GCTAGTTAACTTTATTGAGT+GGG - chr7_3:82386552-82386571 Msa1130280:intron 30.0%
CTAGTTAACTTTATTGAGTG+GGG - chr7_3:82386553-82386572 Msa1130280:intron 30.0%
!! ACAATCTTATCTTGCTTTTC+TGG - chr7_3:82386667-82386686 Msa1130280:intron 30.0%
TAGGAATGGTTATTATTCTG+AGG - chr7_3:82386839-82386858 Msa1130280:intron 30.0%
!! AATGGTTATTATTCTGAGGT+TGG - chr7_3:82386843-82386862 Msa1130280:intron 30.0%
TAATAAAAAGCAAAGCACAC+AGG + chr7_3:82386890-82386909 None:intergenic 30.0%
!!! TGTGTGCTTTGCTTTTTATT+AGG - chr7_3:82386889-82386908 Msa1130280:intron 30.0%
!!! TTTGCTTTTTATTAGGTCAG+CGG - chr7_3:82386896-82386915 Msa1130280:intron 30.0%
CTTTCTGTAGTTGTCTAAAA+AGG + chr7_3:82387005-82387024 None:intergenic 30.0%
AAGAGACATTATTGAGAGTT+TGG - chr7_3:82387199-82387218 Msa1130280:intron 30.0%
AATCCCCAGATTATATCAAA+TGG - chr7_3:82387243-82387262 Msa1130280:intron 30.0%
ATCCCCAGATTATATCAAAT+GGG - chr7_3:82387244-82387263 Msa1130280:intron 30.0%
TTCCCCATTTGATATAATCT+GGG + chr7_3:82387250-82387269 None:intergenic 30.0%
ATTCCCCATTTGATATAATC+TGG + chr7_3:82387251-82387270 None:intergenic 30.0%
AGATTATATCAAATGGGGAA+TGG - chr7_3:82387250-82387269 Msa1130280:intron 30.0%
TCTCCTGTCATCATATTATT+CGG + chr7_3:82387358-82387377 None:intergenic 30.0%
AATAATATGATGACAGGAGA+GGG - chr7_3:82387358-82387377 Msa1130280:intron 30.0%
ATTATTATTAGGCCATAAGC+AGG - chr7_3:82387437-82387456 Msa1130280:CDS 30.0%
! CATTAGTTTACTTTCCTTCT+AGG - chr7_3:82387570-82387589 Msa1130280:intron 30.0%
TCGTCAACATTACATTCAAA+TGG + chr7_3:82387608-82387627 None:intergenic 30.0%
!!! TTTCTTTTTTGGATGGTTTG+CGG - chr7_3:82387744-82387763 Msa1130280:CDS 30.0%
!! GTATATGGTTGGTTTGTTAT+TGG - chr7_3:82387861-82387880 Msa1130280:five_prime_UTR 30.0%
AAGAAAAGCAGAGTGCAATT+TGG - chr7_3:82382990-82383009 Msa1130280:three_prime_UTR 35.0%
!!! CATTTTTTTAGGGTTTCGGA+GGG + chr7_3:82383179-82383198 None:intergenic 35.0%
!!! GAGGCATTTTTTTAGGGTTT+CGG + chr7_3:82383183-82383202 None:intergenic 35.0%
!!! TCTCTCGAGGCATTTTTTTA+GGG + chr7_3:82383189-82383208 None:intergenic 35.0%
!!! ATCTCTCGAGGCATTTTTTT+AGG + chr7_3:82383190-82383209 None:intergenic 35.0%
AGAGATAATCACACTTCAAG+TGG - chr7_3:82383204-82383223 Msa1130280:three_prime_UTR 35.0%
GAGATAATCACACTTCAAGT+GGG - chr7_3:82383205-82383224 Msa1130280:three_prime_UTR 35.0%
! CCGTGCTTTATTGATTGATT+TGG - chr7_3:82383463-82383482 Msa1130280:intron 35.0%
TTGGAACCAAGGGTTATTAA+TGG - chr7_3:82383482-82383501 Msa1130280:intron 35.0%
! ATTTTTGTTGCTGATCATGG+TGG - chr7_3:82383548-82383567 Msa1130280:CDS 35.0%
!! TTAGCATGCTAATGGTTTTG+TGG - chr7_3:82383864-82383883 Msa1130280:intron 35.0%
TTAGTAGTGAATGGACAGAT+AGG - chr7_3:82383944-82383963 Msa1130280:CDS 35.0%
AGTCACAATTCCTGTAATCA+AGG - chr7_3:82383976-82383995 Msa1130280:CDS 35.0%
GTCACAATTCCTGTAATCAA+GGG - chr7_3:82383977-82383996 Msa1130280:CDS 35.0%
ATATTCCTTCCCTTGATTAC+AGG + chr7_3:82383989-82384008 None:intergenic 35.0%
AAGGGAAGGAATATGTGTAA+GGG - chr7_3:82383995-82384014 Msa1130280:CDS 35.0%
CTGAATACATAAAGGAGAAC+TGG + chr7_3:82384132-82384151 None:intergenic 35.0%
AGTCAGTGTATAAACTAAGG+AGG + chr7_3:82384191-82384210 None:intergenic 35.0%
TCCTTAGTTTATACACTGAC+TGG - chr7_3:82384190-82384209 Msa1130280:intron 35.0%
! CCTTAGTTTATACACTGACT+GGG - chr7_3:82384191-82384210 Msa1130280:intron 35.0%
!! ACAAGTGAAGCATTGTGTAA+TGG + chr7_3:82384278-82384297 None:intergenic 35.0%
ATCGTCAACCTTCCATAATA+CGG - chr7_3:82384480-82384499 Msa1130280:intron 35.0%
ATAGTTGACTAAGACTCCTA+TGG + chr7_3:82384576-82384595 None:intergenic 35.0%
TCAGATATTAACAACCACAC+AGG + chr7_3:82384680-82384699 None:intergenic 35.0%
GTGGTTGTTAATATCTGATC+AGG - chr7_3:82384682-82384701 Msa1130280:intron 35.0%
GTTCTATGTCATTCAATTGC+TGG - chr7_3:82384779-82384798 Msa1130280:intron 35.0%
TATGTCATTCAATTGCTGGA+GGG - chr7_3:82384783-82384802 Msa1130280:intron 35.0%
AACGCATAATGGCTAAGAAT+TGG - chr7_3:82385021-82385040 Msa1130280:CDS 35.0%
ACGCATAATGGCTAAGAATT+GGG - chr7_3:82385022-82385041 Msa1130280:CDS 35.0%
TCCATTCATTTATGCAGGTA+TGG - chr7_3:82385166-82385185 Msa1130280:CDS 35.0%
CCATTCATTTATGCAGGTAT+GGG - chr7_3:82385167-82385186 Msa1130280:intron 35.0%
!!! GAACCAGTTTTTTGCTGTAT+CGG + chr7_3:82385220-82385239 None:intergenic 35.0%
! TCTTAATGCTGATTGTGTTG+TGG - chr7_3:82385328-82385347 Msa1130280:intron 35.0%
TGCACTTAATAGAATTGCTG+TGG - chr7_3:82385364-82385383 Msa1130280:intron 35.0%
AGACATCACAGTAGAAACTA+GGG + chr7_3:82385432-82385451 None:intergenic 35.0%
GTCATTAGAAAATGGCATCT+TGG + chr7_3:82385533-82385552 None:intergenic 35.0%
!!! AGATGCCATTTTCTAATGAC+AGG - chr7_3:82385533-82385552 Msa1130280:CDS 35.0%
GGAGGAAATATAAAATAGGG+GGG + chr7_3:82385728-82385747 None:intergenic 35.0%
CGGAGGAAATATAAAATAGG+GGG + chr7_3:82385729-82385748 None:intergenic 35.0%
TATTTCCTCCGTAATCTGAT+CGG - chr7_3:82385738-82385757 Msa1130280:CDS 35.0%
TTATGGTCTCTTCTTATGCA+CGG - chr7_3:82385916-82385935 Msa1130280:intron 35.0%
GACTTGAGTATAAGATTGCT+TGG + chr7_3:82386299-82386318 None:intergenic 35.0%
TAATCTTCAACTGATGGTTG+TGG - chr7_3:82386340-82386359 Msa1130280:intron 35.0%
!! TCTTATCTTGCTTTTCTGGT+AGG - chr7_3:82386671-82386690 Msa1130280:intron 35.0%
! TTGAACATATGGGGATTTTC+TGG + chr7_3:82386706-82386725 None:intergenic 35.0%
TGTGTGCAGTTTGAACATAT+GGG + chr7_3:82386716-82386735 None:intergenic 35.0%
ATATGTTCAAACTGCACACA+GGG - chr7_3:82386716-82386735 Msa1130280:intron 35.0%
CAATCAGATGTAATGCAGAA+AGG + chr7_3:82386792-82386811 None:intergenic 35.0%
TGCATTACATCTGATTGCAT+TGG - chr7_3:82386795-82386814 Msa1130280:intron 35.0%
! TAGTATGACTAGCCAACATA+AGG + chr7_3:82386922-82386941 None:intergenic 35.0%
GACATTTACTGAAAAGGTGA+CGG + chr7_3:82386949-82386968 None:intergenic 35.0%
GAACACTTACAGCAAACATT+GGG + chr7_3:82387030-82387049 None:intergenic 35.0%
TTATCCTGTCCAATTGTCAT+TGG + chr7_3:82387155-82387174 None:intergenic 35.0%
TTGATTCATCAAACTCTGAG+AGG + chr7_3:82387181-82387200 None:intergenic 35.0%
GAGTTTGGTTGACGAATATA+AGG - chr7_3:82387214-82387233 Msa1130280:intron 35.0%
TCCCCAGATTATATCAAATG+GGG - chr7_3:82387245-82387264 Msa1130280:intron 35.0%
TCCCCATTTGATATAATCTG+GGG + chr7_3:82387249-82387268 None:intergenic 35.0%
TTATATCAAATGGGGAATGG+AGG - chr7_3:82387253-82387272 Msa1130280:intron 35.0%
GATCCGAATAATATGATGAC+AGG - chr7_3:82387352-82387371 Msa1130280:intron 35.0%
GAATAATATGATGACAGGAG+AGG - chr7_3:82387357-82387376 Msa1130280:intron 35.0%
!!! TGGCTCATTTTGAGTTAGAA+AGG + chr7_3:82387640-82387659 None:intergenic 35.0%
AAGATTCTTGTGTACTTGAC+TGG - chr7_3:82387669-82387688 Msa1130280:CDS 35.0%
TACAGTGGTATTCTGTACTA+CGG + chr7_3:82387822-82387841 None:intergenic 35.0%
CTGAAAACGAATAACTACAG+TGG + chr7_3:82387837-82387856 None:intergenic 35.0%
AAAAGCAGAGTGCAATTTGG+CGG - chr7_3:82382993-82383012 Msa1130280:three_prime_UTR 40.0%
!!! GCATTTTTTTAGGGTTTCGG+AGG + chr7_3:82383180-82383199 None:intergenic 40.0%
TGAAGTGTGATTATCTCTCG+AGG + chr7_3:82383202-82383221 None:intergenic 40.0%
AAACAACTCTGTCTCGAACA+TGG - chr7_3:82383262-82383281 Msa1130280:intron 40.0%
GAACATGGTATCAGCAAAGA+CGG - chr7_3:82383277-82383296 Msa1130280:intron 40.0%
! AAGTCTTATCCCGCTAATTG+AGG + chr7_3:82383643-82383662 None:intergenic 40.0%
TCAATTAGCGGGATAAGACT+TGG - chr7_3:82383642-82383661 Msa1130280:intron 40.0%
CAATTCCTGTAATCAAGGGA+AGG - chr7_3:82383981-82384000 Msa1130280:CDS 40.0%
CAAGGGAAGGAATATGTGTA+AGG - chr7_3:82383994-82384013 Msa1130280:CDS 40.0%
AAGGAATATGTGTAAGGGCA+AGG - chr7_3:82384000-82384019 Msa1130280:CDS 40.0%
GAAACCAAGAGGAGAAAGAT+CGG + chr7_3:82384096-82384115 None:intergenic 40.0%
CCCAGTCAGTGTATAAACTA+AGG + chr7_3:82384194-82384213 None:intergenic 40.0%
! TTTATACACTGACTGGGAGT+TGG - chr7_3:82384197-82384216 Msa1130280:intron 40.0%
ATAACTAGAAAGGCCTCAGA+TGG - chr7_3:82384445-82384464 Msa1130280:intron 40.0%
! GGTAGTTTTTGTACAGTACC+TGG - chr7_3:82384501-82384520 Msa1130280:intron 40.0%
CATTATAATCCTGATAGGCC+AGG - chr7_3:82384550-82384569 Msa1130280:intron 40.0%
GAATCAATTGTGAACCTGTG+TGG - chr7_3:82384663-82384682 Msa1130280:intron 40.0%
ATGATTGACAGAGAAGCAGA+TGG - chr7_3:82384734-82384753 Msa1130280:intron 40.0%
CTATGTCATTCAATTGCTGG+AGG - chr7_3:82384782-82384801 Msa1130280:intron 40.0%
GATGTCCTAAGGCAAATACT+AGG + chr7_3:82384839-82384858 None:intergenic 40.0%
CTTAAGAACCGACAATTTGC+TGG - chr7_3:82384918-82384937 Msa1130280:intron 40.0%
TCAAGAGCGGAAATTGAACA+GGG - chr7_3:82384956-82384975 Msa1130280:CDS 40.0%
CCCATACCTGCATAAATGAA+TGG + chr7_3:82385170-82385189 None:intergenic 40.0%
GGTCATTCAGAGTCTCTAAA+AGG + chr7_3:82385199-82385218 None:intergenic 40.0%
TGACCGATACAGCAAAAAAC+TGG - chr7_3:82385214-82385233 Msa1130280:intron 40.0%
CACTTGTCTCCATTTGGTTA+GGG + chr7_3:82385259-82385278 None:intergenic 40.0%
TCACTTGTCTCCATTTGGTT+AGG + chr7_3:82385260-82385279 None:intergenic 40.0%
CAGACATCACAGTAGAAACT+AGG + chr7_3:82385433-82385452 None:intergenic 40.0%
!! TCTTGGTGTTGGAATCAAAG+AGG + chr7_3:82385516-82385535 None:intergenic 40.0%
! AGAAAATGGCATCTTGGTGT+TGG + chr7_3:82385527-82385546 None:intergenic 40.0%
ATCGGATGATATTTCCTTGC+AGG - chr7_3:82385756-82385775 Msa1130280:CDS 40.0%
! ACGAATTACATTAGCCTGCA+AGG + chr7_3:82385773-82385792 None:intergenic 40.0%
ATTGACATTAAGTTCCTGGC+AGG - chr7_3:82385884-82385903 Msa1130280:intron 40.0%
CATAATATTCTTTGCCTGCC+AGG + chr7_3:82385901-82385920 None:intergenic 40.0%
CTGGCAGGCAAAGAATATTA+TGG - chr7_3:82385899-82385918 Msa1130280:intron 40.0%
!! TTTAGCTTGGCTAGCATCTT+TGG + chr7_3:82385943-82385962 None:intergenic 40.0%
TCTGAATATCATCCAAGGAG+AGG - chr7_3:82385974-82385993 Msa1130280:intron 40.0%
GTGTGCAGTTTGAACATATG+GGG + chr7_3:82386715-82386734 None:intergenic 40.0%
CTGTGTGCAGTTTGAACATA+TGG + chr7_3:82386717-82386736 None:intergenic 40.0%
CATATGTTCAAACTGCACAC+AGG - chr7_3:82386715-82386734 Msa1130280:intron 40.0%
GGCTCAGACATTTACTGAAA+AGG + chr7_3:82386955-82386974 None:intergenic 40.0%
TCCTTCTCAACTTATCGTAC+TGG + chr7_3:82386976-82386995 None:intergenic 40.0%
GGAACACTTACAGCAAACAT+TGG + chr7_3:82387031-82387050 None:intergenic 40.0%
CTGATGCTACCAATGACAAT+TGG - chr7_3:82387143-82387162 Msa1130280:intron 40.0%
GATATAATCTGGGGATTCAC+AGG + chr7_3:82387240-82387259 None:intergenic 40.0%
ACTCGAAGAAAACCTGCTTA+TGG + chr7_3:82387452-82387471 None:intergenic 40.0%
!! GCAATAAGGAAGTGGTTTTG+TGG - chr7_3:82387702-82387721 Msa1130280:CDS 40.0%
!!! ATAAGGAAGTGGTTTTGTGG+CGG - chr7_3:82387705-82387724 Msa1130280:CDS 40.0%
ACTATTGACACGAAGAATGC+TGG - chr7_3:82387943-82387962 Msa1130280:five_prime_UTR 40.0%
GGTTGAAAAGTAGAGAGTGG+TGG - chr7_3:82383014-82383033 Msa1130280:three_prime_UTR 45.0%
ACACTTCAAGTGGGACAATG+CGG - chr7_3:82383214-82383233 Msa1130280:three_prime_UTR 45.0%
ACCAGATCGGTATGGAATTC+TGG - chr7_3:82383239-82383258 Msa1130280:three_prime_UTR 45.0%
TCCAGAATTCCATACCGATC+TGG + chr7_3:82383243-82383262 None:intergenic 45.0%
! ACTATTTTACCCATGCTCGC+TGG - chr7_3:82383378-82383397 Msa1130280:intron 45.0%
TTTGTTGCTGATCATGGTGG+TGG - chr7_3:82383551-82383570 Msa1130280:CDS 45.0%
!! TGGTGGTGCTGGTAACAATT+GGG - chr7_3:82383568-82383587 Msa1130280:CDS 45.0%
ATGTACCCGACCTCAATTAG+CGG - chr7_3:82383630-82383649 Msa1130280:intron 45.0%
TTATCCCGCTAATTGAGGTC+GGG + chr7_3:82383638-82383657 None:intergenic 45.0%
CTTATCCCGCTAATTGAGGT+CGG + chr7_3:82383639-82383658 None:intergenic 45.0%
AGGGCAAGGTGTATAAGAGA+AGG - chr7_3:82384014-82384033 Msa1130280:CDS 45.0%
! GAGAGGGTGTGAATTATGTG+AGG - chr7_3:82384048-82384067 Msa1130280:intron 45.0%
GGGTGTGAATTATGTGAGGA+TGG - chr7_3:82384052-82384071 Msa1130280:intron 45.0%
CAATCAATGACTCTGGTGTC+TGG - chr7_3:82384313-82384332 Msa1130280:intron 45.0%
AAGGTTGACGATGTTCCTGT+CGG + chr7_3:82384472-82384491 None:intergenic 45.0%
CTCAAGAGCGGAAATTGAAC+AGG - chr7_3:82384955-82384974 Msa1130280:CDS 45.0%
CAAGAGCGGAAATTGAACAG+GGG - chr7_3:82384957-82384976 Msa1130280:CDS 45.0%
AAGAGCGGAAATTGAACAGG+GGG - chr7_3:82384958-82384977 Msa1130280:CDS 45.0%
CAGTGTGTTCCCTAACCAAA+TGG - chr7_3:82385247-82385266 Msa1130280:intron 45.0%
CCACATCACTTGTCTCCATT+TGG + chr7_3:82385265-82385284 None:intergenic 45.0%
CCAAATGGAGACAAGTGATG+TGG - chr7_3:82385262-82385281 Msa1130280:intron 45.0%
AATGGAGACAAGTGATGTGG+TGG - chr7_3:82385265-82385284 Msa1130280:intron 45.0%
ATAACGAAGAGTGGTTGTGC+TGG + chr7_3:82385456-82385475 None:intergenic 45.0%
ACAACCACTCTTCGTTATCC+AGG - chr7_3:82385458-82385477 Msa1130280:CDS 45.0%
GTATCCTGGATAACGAAGAG+TGG + chr7_3:82385465-82385484 None:intergenic 45.0%
GTGTTGGAATCAAAGAGGCA+AGG + chr7_3:82385511-82385530 None:intergenic 45.0%
ATCATCCGATCAGATTACGG+AGG + chr7_3:82385746-82385765 None:intergenic 45.0%
AGGTTCATGAGAGTTTGCAG+AGG - chr7_3:82386515-82386534 Msa1130280:intron 45.0%
TCGCATACCTGAATACTAGC+AGG + chr7_3:82386580-82386599 None:intergenic 45.0%
GTATTCAGGTATGCGATCTG+TGG - chr7_3:82386584-82386603 Msa1130280:intron 45.0%
! GCCAGTACGATAAGTTGAGA+AGG - chr7_3:82386972-82386991 Msa1130280:intron 45.0%
TGCTGCATCTGTTCTGTACT+TGG - chr7_3:82387085-82387104 Msa1130280:intron 45.0%
GCATCTGTTCTGTACTTGGA+TGG - chr7_3:82387089-82387108 Msa1130280:intron 45.0%
GCTACCAATGACAATTGGAC+AGG - chr7_3:82387148-82387167 Msa1130280:intron 45.0%
ATCAAATGGGGAATGGAGGT+AGG - chr7_3:82387257-82387276 Msa1130280:intron 45.0%
TTCTTGTGTACTTGACTGGC+AGG - chr7_3:82387673-82387692 Msa1130280:CDS 45.0%
AGTGGTATTCTGTACTACGG+CGG + chr7_3:82387819-82387838 None:intergenic 45.0%
GGCGGTTGAAAAGTAGAGAG+TGG - chr7_3:82383011-82383030 Msa1130280:three_prime_UTR 50.0%
GGACAATGCGGAAACCAGAT+CGG - chr7_3:82383226-82383245 Msa1130280:three_prime_UTR 50.0%
ATGCGGAAACCAGATCGGTA+TGG - chr7_3:82383231-82383250 Msa1130280:three_prime_UTR 50.0%
CCTGAGTAGCGAAATCTTCG+AGG + chr7_3:82383306-82383325 None:intergenic 50.0%
CCTCGAAGATTTCGCTACTC+AGG - chr7_3:82383303-82383322 Msa1130280:intron 50.0%
!! GTGGTGGTGCTGGTAACAAT+TGG - chr7_3:82383567-82383586 Msa1130280:CDS 50.0%
! GCTGGTAACAATTGGGCTAG+TGG - chr7_3:82383575-82383594 Msa1130280:CDS 50.0%
ATTGAGGTCGGGTACATGGA+TGG + chr7_3:82383627-82383646 None:intergenic 50.0%
GCTAATTGAGGTCGGGTACA+TGG + chr7_3:82383631-82383650 None:intergenic 50.0%
TGTACCCGACCTCAATTAGC+GGG - chr7_3:82383631-82383650 Msa1130280:intron 50.0%
CAAGAGGAGAAAGATCGGAG+AGG + chr7_3:82384091-82384110 None:intergenic 50.0%
CTCTCCGATCTTTCTCCTCT+TGG - chr7_3:82384089-82384108 Msa1130280:intron 50.0%
GACTCTGGTGTCTGGTCTAT+TGG - chr7_3:82384321-82384340 Msa1130280:intron 50.0%
TGACTAAGACTCCTATGGCC+TGG + chr7_3:82384571-82384590 None:intergenic 50.0%
AGATGGCAGTGACAGTCTTG+AGG - chr7_3:82384751-82384770 Msa1130280:intron 50.0%
GATGGCAGTGACAGTCTTGA+GGG - chr7_3:82384752-82384771 Msa1130280:intron 50.0%
CATTCAATTGCTGGAGGGAC+AGG - chr7_3:82384788-82384807 Msa1130280:intron 50.0%
AGAGCGGAAATTGAACAGGG+GGG - chr7_3:82384959-82384978 Msa1130280:CDS 50.0%
AGGATATACGCCTCTGACAG+TGG - chr7_3:82385553-82385572 Msa1130280:CDS 50.0%
CCTCATGACATCAAGCACAG+TGG + chr7_3:82385800-82385819 None:intergenic 50.0%
CCACTGTGCTTGATGTCATG+AGG - chr7_3:82385797-82385816 Msa1130280:intron 50.0%
TGTCATGAGGAGACTTCTGC+AGG - chr7_3:82385810-82385829 Msa1130280:intron 50.0%
GTTGAGCTCATTTGGTACCG+TGG - chr7_3:82386105-82386124 Msa1130280:intron 50.0%
! GAGGCAAAAGTATGCAGCTG+TGG + chr7_3:82386628-82386647 None:intergenic 50.0%
GTTCAAACTGCACACAGGGT+AGG - chr7_3:82386720-82386739 Msa1130280:intron 50.0%
! TTAGGTCAGCGGCCTTATGT+TGG - chr7_3:82386907-82386926 Msa1130280:intron 50.0%
GGTGACGAGCAATAAGGAAG+TGG - chr7_3:82387694-82387713 Msa1130280:CDS 50.0%
ACACGAAGAATGCTGGCAAG+TGG - chr7_3:82387950-82387969 Msa1130280:five_prime_UTR 50.0%
!! TTGGGCTAGTGGCTACCATC+AGG - chr7_3:82383586-82383605 Msa1130280:CDS 55.0%
TGTTCCTGTCGGACCATCTG+AGG + chr7_3:82384461-82384480 None:intergenic 55.0%
ATCCTGATAGGCCAGGCCAT+AGG - chr7_3:82384557-82384576 Msa1130280:intron 55.0%
GAGCGGAAATTGAACAGGGG+GGG - chr7_3:82384960-82384979 Msa1130280:CDS 55.0%
ACCTGACGTTCCACTGTCAG+AGG + chr7_3:82385566-82385585 None:intergenic 55.0%
GAGTTGGGTCAACCTCTCCT+TGG + chr7_3:82385989-82386008 None:intergenic 55.0%
AGGAGAGGTTGACCCAACTC+AGG - chr7_3:82385989-82386008 Msa1130280:intron 55.0%
GTGGGGTCCTGCTAGTATTC+AGG - chr7_3:82386570-82386589 Msa1130280:intron 55.0%
GGCACAAGCACAACCCTAGA+AGG + chr7_3:82387587-82387606 None:intergenic 55.0%
CTGGCAGGTGACGAGCAATA+AGG - chr7_3:82387688-82387707 Msa1130280:CDS 55.0%
!! GCTGATCATGGTGGTGGTGC+TGG - chr7_3:82383557-82383576 Msa1130280:CDS 60.0%
AAGGCCTCAGATGGTCCGAC+AGG - chr7_3:82384454-82384473 Msa1130280:intron 60.0%
CTCCTATGGCCTGGCCTATC+AGG + chr7_3:82384562-82384581 None:intergenic 60.0%
ATTGCTGGAGGGACAGGCTC+AGG - chr7_3:82384794-82384813 Msa1130280:intron 60.0%
GCCTCTGACAGTGGAACGTC+AGG - chr7_3:82385562-82385581 Msa1130280:intron 60.0%
! TACCCATGCTCGCTGGCTGC+AGG - chr7_3:82383385-82383404 Msa1130280:intron 65.0%
! ACCCATGCTCGCTGGCTGCA+GGG - chr7_3:82383386-82383405 Msa1130280:intron 65.0%
TCCCTGCAGCCAGCGAGCAT+GGG + chr7_3:82383390-82383409 None:intergenic 65.0%
ACAGGAGAGGGCAGTGCTGC+AGG - chr7_3:82387370-82387389 Msa1130280:intron 65.0%
GGGCAGTGCTGCAGGATCAC+TGG - chr7_3:82387378-82387397 Msa1130280:intron 65.0%
CTCCCTGCAGCCAGCGAGCA+TGG + chr7_3:82383391-82383410 None:intergenic 70.0%
! CATGCTCGCTGGCTGCAGGG+AGG - chr7_3:82383389-82383408 Msa1130280:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 82382986 82387977 82382986 ID=Msa1130280;Name=Msa1130280
chr7_3 mRNA 82382986 82387977 82382986 ID=Msa1130280-mRNA-1;Parent=Msa1130280;Name=Msa1130280-mRNA-1;_AED=0.05;_eAED=0.05;_QI=210|0.83|0.76|1|0.66|0.46|13|292|454
chr7_3 exon 82382986 82383268 82382986 ID=Msa1130280-mRNA-1:exon:24234;Parent=Msa1130280-mRNA-1
chr7_3 exon 82383534 82383611 82383534 ID=Msa1130280-mRNA-1:exon:24233;Parent=Msa1130280-mRNA-1
chr7_3 exon 82383689 82383793 82383689 ID=Msa1130280-mRNA-1:exon:24232;Parent=Msa1130280-mRNA-1
chr7_3 exon 82383924 82384052 82383924 ID=Msa1130280-mRNA-1:exon:24231;Parent=Msa1130280-mRNA-1
chr7_3 exon 82384226 82384270 82384226 ID=Msa1130280-mRNA-1:exon:24230;Parent=Msa1130280-mRNA-1
chr7_3 exon 82384372 82384446 82384372 ID=Msa1130280-mRNA-1:exon:24229;Parent=Msa1130280-mRNA-1
chr7_3 exon 82384953 82385057 82384953 ID=Msa1130280-mRNA-1:exon:24228;Parent=Msa1130280-mRNA-1
chr7_3 exon 82385132 82385185 82385132 ID=Msa1130280-mRNA-1:exon:24227;Parent=Msa1130280-mRNA-1
chr7_3 exon 82385380 82385574 82385380 ID=Msa1130280-mRNA-1:exon:24226;Parent=Msa1130280-mRNA-1
chr7_3 exon 82385581 82385780 82385581 ID=Msa1130280-mRNA-1:exon:24225;Parent=Msa1130280-mRNA-1
chr7_3 exon 82386148 82386259 82386148 ID=Msa1130280-mRNA-1:exon:24224;Parent=Msa1130280-mRNA-1
chr7_3 exon 82387410 82387556 82387410 ID=Msa1130280-mRNA-1:exon:24223;Parent=Msa1130280-mRNA-1
chr7_3 exon 82387639 82387977 82387639 ID=Msa1130280-mRNA-1:exon:24222;Parent=Msa1130280-mRNA-1
chr7_3 five_prime_UTR 82387768 82387977 82387768 ID=Msa1130280-mRNA-1:five_prime_utr;Parent=Msa1130280-mRNA-1
chr7_3 CDS 82387639 82387767 82387639 ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1
chr7_3 CDS 82387410 82387556 82387410 ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1
chr7_3 CDS 82386148 82386259 82386148 ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1
chr7_3 CDS 82385581 82385780 82385581 ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1
chr7_3 CDS 82385380 82385574 82385380 ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1
chr7_3 CDS 82385132 82385185 82385132 ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1
chr7_3 CDS 82384953 82385057 82384953 ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1
chr7_3 CDS 82384372 82384446 82384372 ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1
chr7_3 CDS 82384226 82384270 82384226 ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1
chr7_3 CDS 82383924 82384052 82383924 ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1
chr7_3 CDS 82383689 82383793 82383689 ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1
chr7_3 CDS 82383543 82383611 82383543 ID=Msa1130280-mRNA-1:cds;Parent=Msa1130280-mRNA-1
chr7_3 three_prime_UTR 82383534 82383542 82383534 ID=Msa1130280-mRNA-1:three_prime_utr;Parent=Msa1130280-mRNA-1
chr7_3 three_prime_UTR 82382986 82383268 82382986 ID=Msa1130280-mRNA-1:three_prime_utr;Parent=Msa1130280-mRNA-1
Gene Sequence

>Msa1130280

ATGCCTCGAGAGATAATCACACTTCAAGTGGGACAATGCGGAAACCAGATCGGTATGGAATTCTGGAAACAACTCTGTCTCGAACATGGTATCAGCAAAGACGGCATCCTCGAAGATTTCGCTACTCAGGGAGGTGATAGAAAAGATGTTTTCTTTTATCAAGCTGATGATCAACATTACATACCCCGTGCTTTATTGATTGATTTGGAACCAAGGGTTATTAATGGAATTCAAAATAGTGATTACCGTAATCTTTACAATCATGAGAATATTTTTGGAAAGAATGTTGAAGAAGACATAATGGACATGATTGACAGAGAAGCAGATGGCAGTGACAGTCTTGAGGGTTTTGTTCTATGTCATTCAATTGCTGGAGGGACAGGCTCAGGTATGGGCTCATACCTTTTAGAGACTCTGAATGACCGATACAGCAAAAAACTGGTTCAGACATACAGTGTGTTCCCTAACCAAATGGAGACAAGTGATGTGGTGGTCCAACCATATAACTCACTTTTGACACTCAAGCGACTGACTCTTAATGCTGATTGTGTTGTGGTTCTTGACAATACTGCACTTAATAGAATTGCTCGACTGCATTTATCAAATCCAACATTTGCTCAAACAAATTCCCTAGTTTCTACTGTGATGTCTGCCAGCACAACCACTCTTCGTTATCCAGGATACATGAATAATGACTTGGTTGGTCTCCTTGCCTCTTTGATTCCAACACCAAGATGCCATTTTCTAATGACAGGATATACGCCTCTGACAGTGGAACGTCAGGCTAATGTAATTCGTAAGACCACTGTGCTTGATGTCATGAGGAGACTTCTGCAGGCAAAGAATATTATGGTCTCTTCTTATGCACGGACCAAAGATGCTAGCCAAGCTAAATATATATCAATTCTGAATATCATCCAAGGAGAGGTTGACCCAACTCAGGTTCATGAGAGTTTGCAGAGGATTCGTGAAAGAAAGCTAGTTAACTTTATTGAGTGGGGTCCTGCTAGTATTCAGGTTGCTCTATCCAGAAAATCCCCATATGTTCAAACTGCACACAGGGTCAGCGGCCTTATGTTGGCTAGTCATACTAGCATCCGTCACCTTTTCAGTAAATGTCTGAGCCAGTACGATAAGTTGAGAAGGAAACAAGCCTTTTTAGACAACTACAGAAAGTTCCCAATGTTTGCTGATAATGACCTCTCAGAGTTTGATGAATCAAGAGACATTATTGAGAGTTTGGTTGACGAATATAAGGCCTGTGAATCCCCAGATTATATCAAATGGGGAATGGAGGATCCGAATAATATGATGACAGGAGAGGGCAGTGCTGCAGGATCACTGGATCCAAAATCAGTAGTATGA

Protein sequence

>Msa1130280

MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNSDYRNLYNHENIFGKNVEEDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIARLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYDKLRRKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPNNMMTGEGSAAGSLDPKSVV*