Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1393850 | XP_003592804.1 | 97.862 | 608 | 12 | 1 | 1 | 608 | 1 | 607 | 0.0 | 1236 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1393850 | sp|Q9FY49|LKHA4_ARATH | 69.692 | 617 | 177 | 3 | 1 | 608 | 1 | 616 | 0.0 | 902 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1393850 | G7IAW9 | 97.862 | 608 | 12 | 1 | 1 | 608 | 1 | 607 | 0.0 | 1236 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011210 | Msa1393850 | 0.801904 | 7.225628e-49 | -8.615850e-47 |
| Msa0089950 | Msa1393850 | 0.833910 | 4.064112e-56 | -8.615850e-47 |
| Msa1368170 | Msa1393850 | 0.812406 | 4.307429e-51 | -8.615850e-47 |
| Msa1385570 | Msa1393850 | 0.839424 | 1.597594e-57 | -8.615850e-47 |
| Msa1393850 | Msa1400780 | 0.805312 | 1.418618e-49 | -8.615850e-47 |
| Msa1393850 | Msa1408160 | 0.803391 | 3.564672e-49 | -8.615850e-47 |
| Msa1393850 | Msa1419900 | 0.804099 | 2.541379e-49 | -8.615850e-47 |
| Msa1393850 | Msa1448960 | 0.802377 | 5.773838e-49 | -8.615850e-47 |
| Msa0687370 | Msa1393850 | 0.866122 | 3.590444e-65 | -8.615850e-47 |
| Msa0701890 | Msa1393850 | 0.810464 | 1.137665e-50 | -8.615850e-47 |
| Msa1236150 | Msa1393850 | 0.928172 | 4.203036e-92 | -8.615850e-47 |
| Msa0396530 | Msa1393850 | 0.826806 | 2.216528e-54 | -8.615850e-47 |
| Msa0413170 | Msa1393850 | 0.818972 | 1.483079e-52 | -8.615850e-47 |
| Msa1008850 | Msa1393850 | 0.829467 | 5.063783e-55 | -8.615850e-47 |
| Msa1019200 | Msa1393850 | 0.811390 | 7.170891e-51 | -8.615850e-47 |
| Msa1050260 | Msa1393850 | 0.858676 | 6.996796e-63 | -8.615850e-47 |
| Msa1078080 | Msa1393850 | 0.811575 | 6.536483e-51 | -8.615850e-47 |
| Msa0241040 | Msa1393850 | 0.809730 | 1.637652e-50 | -8.615850e-47 |
| Msa0276730 | Msa1393850 | 0.817563 | 3.091136e-52 | -8.615850e-47 |
| Msa0316630 | Msa1393850 | 0.811520 | 6.720408e-51 | -8.615850e-47 |
| Msa1147700 | Msa1393850 | 0.800618 | 1.324530e-48 | -8.615850e-47 |
| Msa1174670 | Msa1393850 | 0.803939 | 2.743669e-49 | -8.615850e-47 |
| Msa1218810 | Msa1393850 | 0.819338 | 1.223686e-52 | -8.615850e-47 |
| Msa0491550 | Msa1393850 | 0.839203 | 1.823852e-57 | -8.615850e-47 |
| Msa0532160 | Msa1393850 | 0.824708 | 6.974163e-54 | -8.615850e-47 |
| Msa0552570 | Msa1393850 | 0.807603 | 4.663435e-50 | -8.615850e-47 |
| Msa0580940 | Msa1393850 | 0.808163 | 3.544174e-50 | -8.615850e-47 |
| Msa0866460 | Msa1393850 | 0.813729 | 2.209107e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1393850 | MtrunA17_Chr1g0213331 | 97.862 | 608 | 12 | 1 | 1 | 608 | 1 | 607 | 0.0 | 1236 |
| Msa1393850 | MtrunA17_Chr3g0135971 | 27.577 | 359 | 209 | 14 | 120 | 455 | 128 | 458 | 1.59e-20 | 96.3 |
| Msa1393850 | MtrunA17_Chr8g0343081 | 26.836 | 354 | 216 | 14 | 121 | 455 | 131 | 460 | 7.69e-19 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1393850 | AT5G13520.1 | 69.692 | 617 | 177 | 3 | 1 | 608 | 1 | 616 | 0.0 | 902 |
| Msa1393850 | AT4G33090.1 | 25.414 | 362 | 215 | 12 | 119 | 455 | 127 | 458 | 1.88e-20 | 96.7 |
Find 208 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCAGGGATGTTTGCTTTA+AGG | 0.143966 | tig0021759:+85962 | None:intergenic |
| CACCTTAACCTCATAATCTT+TGG | 0.221536 | tig0021759:+84169 | None:intergenic |
| ATCACAGCCGTCAATTCTTT+TGG | 0.251292 | tig0021759:+87848 | None:intergenic |
| AAGGACCAGAGTGAGGGTTT+TGG | 0.268631 | tig0021759:+88194 | None:intergenic |
| TATAGAAGCATCAGAATAAA+AGG | 0.269487 | tig0021759:+83804 | None:intergenic |
| CAGGCAAATGAGTCGGTAAA+TGG | 0.270034 | tig0021759:-85841 | Msa1393850:CDS |
| GATGATGATGATGAGTGTTT+TGG | 0.272847 | tig0021759:-87791 | Msa1393850:CDS |
| AGCCATTAGGGTTTGTTATT+CGG | 0.287767 | tig0021759:-87885 | Msa1393850:CDS |
| TTGACCCCGACGGTTATTAA+AGG | 0.309873 | tig0021759:-87470 | Msa1393850:CDS |
| CTTCTTCCTCTGCTCTTCAA+TGG | 0.332406 | tig0021759:-88006 | Msa1393850:CDS |
| ATGGGACTGAGGATATGATT+AGG | 0.334329 | tig0021759:-87598 | Msa1393850:CDS |
| GCAAATAGGTAAGGTGGAAT+TGG | 0.334855 | tig0021759:+87722 | None:intergenic |
| AATTGCTTATACTTTGTATT+CGG | 0.335503 | tig0021759:-83668 | Msa1393850:three_prime_UTR |
| GGGAGGTGGGGCCCAGGACT+AGG | 0.338745 | tig0021759:-87673 | Msa1393850:CDS |
| AAAAGAGCCATGTTGAATAT+TGG | 0.341081 | tig0021759:-86484 | Msa1393850:CDS |
| ATGGTTGGAGAGAGGGAAAA+AGG | 0.341656 | tig0021759:+88106 | None:intergenic |
| AGGGAAGGGGAAAGATTGTT+TGG | 0.345742 | tig0021759:-87578 | Msa1393850:CDS |
| CTCTTCCACCACTCTACCTT+TGG | 0.353869 | tig0021759:+87760 | None:intergenic |
| CAGTTGGTGAGCTTGATAAC+AGG | 0.359790 | tig0021759:-87694 | Msa1393850:CDS |
| TGAGAAGCTTCAATAGATTT+CGG | 0.360972 | tig0021759:+85748 | None:intergenic |
| TCAGGACACACCAGCCATTA+GGG | 0.369317 | tig0021759:-87897 | Msa1393850:CDS |
| CATCAGGGTCAATTCCTTCC+TGG | 0.372777 | tig0021759:+86386 | None:intergenic |
| TGGGACTGAGGATATGATTA+GGG | 0.374830 | tig0021759:-87597 | Msa1393850:CDS |
| GTCAGGACACACCAGCCATT+AGG | 0.375461 | tig0021759:-87898 | Msa1393850:CDS |
| TCAACAACACCTTGAGCAAT+AGG | 0.378580 | tig0021759:+83957 | None:intergenic |
| GAGAAAACGTTAAAAGAAGT+TGG | 0.385521 | tig0021759:-84092 | Msa1393850:CDS |
| TGACATCCCAACCGATTCAT+TGG | 0.396769 | tig0021759:-83742 | Msa1393850:three_prime_UTR |
| TGACCCCGACGGTTATTAAA+GGG | 0.399260 | tig0021759:-87469 | Msa1393850:CDS |
| ACCTGAGAATACACATCATC+AGG | 0.399303 | tig0021759:+86370 | None:intergenic |
| AGAGAGGTTCAAGGACAATA+TGG | 0.400955 | tig0021759:-86431 | Msa1393850:CDS |
| GTGAGTTTAGAACCCTTGAT+TGG | 0.402646 | tig0021759:+88079 | None:intergenic |
| ATCCAAAGATTATGAGGTTA+AGG | 0.404774 | tig0021759:-84171 | Msa1393850:CDS |
| ATCAATCGATTTGAACTTGA+AGG | 0.410059 | tig0021759:+86005 | None:intergenic |
| GGTGCCATTGTTGTTGTTGT+TGG | 0.416415 | tig0021759:+88331 | None:intergenic |
| CCCTTGATTGGGTCGATGGT+TGG | 0.416580 | tig0021759:+88091 | None:intergenic |
| CACCAACTGCAAATGCAAAT+AGG | 0.418291 | tig0021759:+87708 | None:intergenic |
| AACTGGAAACCTTTCTCATA+TGG | 0.422788 | tig0021759:+86346 | None:intergenic |
| AGCAGAGGAAGAAGGGGAGG+TGG | 0.429072 | tig0021759:+88015 | None:intergenic |
| CTCATGAACTTGCTCATAGC+TGG | 0.429580 | tig0021759:-87421 | Msa1393850:CDS |
| GTTCAATGCGCAACAAGAAC+TGG | 0.434717 | tig0021759:+86329 | None:intergenic |
| GAAATCTATTGAAGCTTCTC+AGG | 0.435996 | tig0021759:-85746 | Msa1393850:intron |
| TGCAACCGGTGCACAGGTTG+TGG | 0.437418 | tig0021759:-87444 | Msa1393850:CDS |
| AGGGAAATGTGAGTGGTTGG+TGG | 0.443335 | tig0021759:+88274 | None:intergenic |
| TCAATCTTATTCTCTATGCC+AGG | 0.444219 | tig0021759:+85946 | None:intergenic |
| TCAGCTGCTAAAGAGTTTGA+TGG | 0.444601 | tig0021759:-87617 | Msa1393850:CDS |
| CATCCCCTTTAATAACCGTC+GGG | 0.448553 | tig0021759:+87465 | None:intergenic |
| TGACATTGAGTATAGACAAA+AGG | 0.450662 | tig0021759:+87950 | None:intergenic |
| TGGTTGGAGGGGTTTAAATG+AGG | 0.452149 | tig0021759:-86458 | Msa1393850:CDS |
| TATTGTGCAGGTCTTAGCCT+TGG | 0.452157 | tig0021759:-84216 | Msa1393850:intron |
| GCCATGTTGAATATTGGAAT+TGG | 0.454549 | tig0021759:-86478 | Msa1393850:CDS |
| GTGGGAGAGATTTGATTTGT+TGG | 0.456341 | tig0021759:-87546 | Msa1393850:CDS |
| TCAGGAGTGGGAGCTCTACT+TGG | 0.456702 | tig0021759:-85779 | Msa1393850:CDS |
| TGGTTTATTATTATAGATTG+AGG | 0.458039 | tig0021759:-83722 | Msa1393850:three_prime_UTR |
| TAAGGTGTCATTTCTCCAAC+GGG | 0.459712 | tig0021759:-84153 | Msa1393850:CDS |
| GAAAACAGAACGGGCATGAA+TGG | 0.460537 | tig0021759:+87925 | None:intergenic |
| GTCTTATATACACTGGAGTC+GGG | 0.472504 | tig0021759:+85874 | None:intergenic |
| AGAACCCTTGATTGGGTCGA+TGG | 0.473280 | tig0021759:+88087 | None:intergenic |
| TCTCAGGTTCCATATGAGAA+AGG | 0.477154 | tig0021759:-86355 | Msa1393850:CDS |
| CAGTGATGGAGTGGATTTCA+AGG | 0.477695 | tig0021759:+88152 | None:intergenic |
| TCCAACCATCGACCCAATCA+AGG | 0.478388 | tig0021759:-88092 | Msa1393850:CDS |
| TTGTTGGAGAGTGGAGAAGA+TGG | 0.479273 | tig0021759:+88347 | None:intergenic |
| TTCAGAAACTCATCAAATGC+AGG | 0.480159 | tig0021759:+86042 | None:intergenic |
| CCCTGATGATGTGTATTCTC+AGG | 0.481874 | tig0021759:-86371 | Msa1393850:CDS |
| TGAGTTTAGAACCCTTGATT+GGG | 0.483336 | tig0021759:+88080 | None:intergenic |
| AATATTGGAATTGGTTGGAG+GGG | 0.484685 | tig0021759:-86469 | Msa1393850:CDS |
| ATCTGAATCCAAAGATTATG+AGG | 0.485915 | tig0021759:-84177 | Msa1393850:CDS |
| GGTTTATTATTATAGATTGA+GGG | 0.486536 | tig0021759:-83721 | Msa1393850:three_prime_UTR |
| ATAACAGGGAGGTGGGGCCC+AGG | 0.486872 | tig0021759:-87679 | Msa1393850:CDS |
| GGCCGAATAACAAACCCTAA+TGG | 0.487856 | tig0021759:+87883 | None:intergenic |
| TAATAAACCAATGAATCGGT+TGG | 0.489670 | tig0021759:+83735 | None:intergenic |
| CATTGAAGAGCAGAGGAAGA+AGG | 0.494860 | tig0021759:+88007 | None:intergenic |
| GTTATTAAAGGGGATGCAAC+CGG | 0.495380 | tig0021759:-87458 | Msa1393850:CDS |
| TGGGTCGATGGTTGGAGAGA+GGG | 0.496813 | tig0021759:+88099 | None:intergenic |
| AATAAACCAATGAATCGGTT+GGG | 0.498589 | tig0021759:+83736 | None:intergenic |
| GGATTGAGAAGGGTCAGTGA+TGG | 0.500891 | tig0021759:+88138 | None:intergenic |
| TCAGCAATTTCATCCTCCCT+TGG | 0.501574 | tig0021759:+85811 | None:intergenic |
| TGAGGATATGATTAGGGAAG+GGG | 0.503195 | tig0021759:-87591 | Msa1393850:CDS |
| AATTGCTGAGTGGCAAGGTC+AGG | 0.503227 | tig0021759:-85797 | Msa1393850:CDS |
| ATTGAAGAGCAGAGGAAGAA+GGG | 0.503299 | tig0021759:+88008 | None:intergenic |
| AGGGGATGCAACCGGTGCAC+AGG | 0.505859 | tig0021759:-87450 | Msa1393850:CDS |
| GCATCCCCTTTAATAACCGT+CGG | 0.506180 | tig0021759:+87464 | None:intergenic |
| GACATTGAGTATAGACAAAA+GGG | 0.506303 | tig0021759:+87951 | None:intergenic |
| TTAGGGTTTGTTATTCGGCC+CGG | 0.506368 | tig0021759:-87880 | Msa1393850:CDS |
| GAATGTTCCAAAAGAATTGA+CGG | 0.506622 | tig0021759:-87855 | Msa1393850:CDS |
| GGAGGTGGGGCCCAGGACTA+GGG | 0.506704 | tig0021759:-87672 | Msa1393850:CDS |
| TTCAGCATAAACCCTAGTCC+TGG | 0.507344 | tig0021759:+87661 | None:intergenic |
| AGGTGTGGTTAGAAAGAGTG+AGG | 0.507367 | tig0021759:+88056 | None:intergenic |
| TACCTATTTGCATTTGCAGT+TGG | 0.507637 | tig0021759:-87710 | Msa1393850:CDS |
| TGTCTTATATACACTGGAGT+CGG | 0.511411 | tig0021759:+85873 | None:intergenic |
| GAGCTTGATAACAGGGAGGT+GGG | 0.512339 | tig0021759:-87686 | Msa1393850:CDS |
| AAGAGCAGAGGAAGAAGGGG+AGG | 0.512487 | tig0021759:+88012 | None:intergenic |
| GTGTATGAGTGAGGATCAAC+GGG | 0.513328 | tig0021759:+88310 | None:intergenic |
| GTGGAGAAGATGGGAATGAG+AGG | 0.514997 | tig0021759:+88357 | None:intergenic |
| AGGCAAATGAGTCGGTAAAT+GGG | 0.515952 | tig0021759:-85840 | Msa1393850:CDS |
| ATAATAATAAACCAATGAAT+CGG | 0.516127 | tig0021759:+83731 | None:intergenic |
| TTATGCAGAGCGGAGGATTG+TGG | 0.516215 | tig0021759:-86524 | Msa1393850:CDS |
| TTCACCAGTGCAGTGTAAAG+TGG | 0.517047 | tig0021759:+84050 | None:intergenic |
| GAACTTGCTCATAGCTGGAC+TGG | 0.520607 | tig0021759:-87416 | Msa1393850:CDS |
| CGGTAAATGGGAGGATGCCA+AGG | 0.521443 | tig0021759:-85828 | Msa1393850:CDS |
| GAACGAGTGTCGAGGAAGAA+AGG | 0.524067 | tig0021759:+88175 | None:intergenic |
| TTGGGTCGATGGTTGGAGAG+AGG | 0.527128 | tig0021759:+88098 | None:intergenic |
| TACCTTCTGTCCACAGTACA+AGG | 0.527979 | tig0021759:+85923 | None:intergenic |
| TTCCTTAAAGCAAACATCCC+TGG | 0.529774 | tig0021759:-85964 | Msa1393850:CDS |
| TGTTGAATATTGGAATTGGT+TGG | 0.529933 | tig0021759:-86474 | Msa1393850:CDS |
| CTCCAACGGGCTATTTCATG+CGG | 0.531241 | tig0021759:-84140 | Msa1393850:CDS |
| CGTGGTGCGTCGCGAATCGT+TGG | 0.532581 | tig0021759:-87813 | Msa1393850:CDS |
| GGATTCTCCATACCACCATA+AGG | 0.532655 | tig0021759:+87506 | None:intergenic |
| AGTGGTGGAAGAGTTTGAGA+TGG | 0.533645 | tig0021759:-87750 | Msa1393850:CDS |
| CTGACAAGGGAAAACAGAAC+GGG | 0.534230 | tig0021759:+87916 | None:intergenic |
| ATGAATCGGTTGGGATGTCA+CGG | 0.536763 | tig0021759:+83745 | None:intergenic |
| AGCTTGATAACAGGGAGGTG+GGG | 0.541507 | tig0021759:-87685 | Msa1393850:CDS |
| GGGATTGGAGTGGATTGAGA+AGG | 0.542508 | tig0021759:+88127 | None:intergenic |
| AGGATTGTGGAGGCTGTACA+AGG | 0.543120 | tig0021759:-86511 | Msa1393850:CDS |
| TTAAGGTGTCATTTCTCCAA+CGG | 0.543544 | tig0021759:-84154 | Msa1393850:CDS |
| ATACCACCATAAGGAAAACT+AGG | 0.544779 | tig0021759:+87515 | None:intergenic |
| CAGCTGCTAAAGAGTTTGAT+GGG | 0.545330 | tig0021759:-87616 | Msa1393850:CDS |
| CTGAGGATATGATTAGGGAA+GGG | 0.548838 | tig0021759:-87592 | Msa1393850:CDS |
| GAAGCGTGAATGGTTGAAGA+TGG | 0.548907 | tig0021759:+88232 | None:intergenic |
| GGGAAATGTGAGTGGTTGGT+GGG | 0.549128 | tig0021759:+88275 | None:intergenic |
| GAATATTGGAATTGGTTGGA+GGG | 0.549610 | tig0021759:-86470 | Msa1393850:CDS |
| GAAGAGTGCAGAAGCGTGAA+TGG | 0.550026 | tig0021759:+88222 | None:intergenic |
| CCGTCCACTTTACACTGCAC+TGG | 0.552455 | tig0021759:-84054 | Msa1393850:CDS |
| GTGAGGGAAATGTGAGTGGT+TGG | 0.552782 | tig0021759:+88271 | None:intergenic |
| CTTGTTGCGCATTGAACGTG+AGG | 0.557122 | tig0021759:-86323 | Msa1393850:intron |
| TCGGGCTCAAAAGCATCAGA+TGG | 0.557199 | tig0021759:+85892 | None:intergenic |
| GAATAACAAACCCTAATGGC+TGG | 0.558142 | tig0021759:+87887 | None:intergenic |
| AAAAGAATTGACGGCTGTGA+TGG | 0.558281 | tig0021759:-87846 | Msa1393850:CDS |
| ATTGTTTGGAAATTATGAGT+GGG | 0.560386 | tig0021759:-87564 | Msa1393850:CDS |
| AAACGTTAAAAGAAGTTGGA+AGG | 0.561275 | tig0021759:-84088 | Msa1393850:CDS |
| TGAATATTGGAATTGGTTGG+AGG | 0.561291 | tig0021759:-86471 | Msa1393850:CDS |
| TGAAGCTGCGCCTCAACTGT+TGG | 0.561608 | tig0021759:-87642 | Msa1393850:CDS |
| GGATTGGAGTGGATTGAGAA+GGG | 0.561965 | tig0021759:+88128 | None:intergenic |
| ATATAAGACAATTGTATCAC+AGG | 0.562910 | tig0021759:-85860 | Msa1393850:CDS |
| TGAGGATGTAGAGAGGTTCA+AGG | 0.565967 | tig0021759:-86440 | Msa1393850:CDS |
| GAGAAGGGTCAGTGATGGAG+TGG | 0.567983 | tig0021759:+88143 | None:intergenic |
| TGAGCTTGATAACAGGGAGG+TGG | 0.570830 | tig0021759:-87687 | Msa1393850:CDS |
| GCAAATGCAAATAGGTAAGG+TGG | 0.574543 | tig0021759:+87716 | None:intergenic |
| TGTTTGCTTTAAGGAAGTCA+AGG | 0.574551 | tig0021759:+85971 | None:intergenic |
| GGTGGTGTAAGTGATGAGAA+AGG | 0.577397 | tig0021759:+88033 | None:intergenic |
| TGTTACCATCCTATTGCTCA+AGG | 0.578149 | tig0021759:-83966 | Msa1393850:CDS |
| TTGAAGAGCAGAGGAAGAAG+GGG | 0.580264 | tig0021759:+88009 | None:intergenic |
| TACAATTGTCTTATATACAC+TGG | 0.582319 | tig0021759:+85867 | None:intergenic |
| TGTTGGAGAGTGGAGAAGAT+GGG | 0.582821 | tig0021759:+88348 | None:intergenic |
| CTGAGTGGCAAGGTCAGGAG+TGG | 0.584567 | tig0021759:-85792 | Msa1393850:CDS |
| ATGAGCCACAACCTGTGCAC+CGG | 0.585437 | tig0021759:+87439 | None:intergenic |
| AGGAAGAAAGGACCAGAGTG+AGG | 0.587311 | tig0021759:+88187 | None:intergenic |
| GGAAATCTAAGTAGAGTGTG+AGG | 0.587348 | tig0021759:+88254 | None:intergenic |
| GTTTAAATGAGGATGTAGAG+AGG | 0.589075 | tig0021759:-86447 | Msa1393850:CDS |
| GATTGTTTGGAAATTATGAG+TGG | 0.590199 | tig0021759:-87565 | Msa1393850:CDS |
| ACTGAGGATATGATTAGGGA+AGG | 0.591906 | tig0021759:-87593 | Msa1393850:CDS |
| ACTGCAAATGCAAATAGGTA+AGG | 0.591923 | tig0021759:+87713 | None:intergenic |
| TCAGCATAAACCCTAGTCCT+GGG | 0.593338 | tig0021759:+87662 | None:intergenic |
| AAGCGTGAATGGTTGAAGAT+GGG | 0.593942 | tig0021759:+88233 | None:intergenic |
| TAGTTTGTAGCGTGAATCCA+AGG | 0.594849 | tig0021759:+84199 | None:intergenic |
| GACCTTGTACTGTGGACAGA+AGG | 0.594960 | tig0021759:-85925 | Msa1393850:CDS |
| GGTGTGGTTAGAAAGAGTGA+GGG | 0.595482 | tig0021759:+88057 | None:intergenic |
| ATAAGATTGACCTTGTACTG+TGG | 0.602282 | tig0021759:-85933 | Msa1393850:CDS |
| CAATCTTATTCTCTATGCCA+GGG | 0.602858 | tig0021759:+85947 | None:intergenic |
| GACCCCGACGGTTATTAAAG+GGG | 0.605150 | tig0021759:-87468 | Msa1393850:CDS |
| ATGGCTGGTGTGTCCTGACA+AGG | 0.606492 | tig0021759:+87902 | None:intergenic |
| TATTGCTCAAGGTGTTGTTG+AGG | 0.607471 | tig0021759:-83955 | Msa1393850:CDS |
| TAAGAGCCATTGAAGAGCAG+AGG | 0.607807 | tig0021759:+88000 | None:intergenic |
| GGTAAATGGGAGGATGCCAA+GGG | 0.608195 | tig0021759:-85827 | Msa1393850:CDS |
| GGAAGAAAGGACCAGAGTGA+GGG | 0.608235 | tig0021759:+88188 | None:intergenic |
| GTACTGTGGACAGAAGGTAC+TGG | 0.608281 | tig0021759:-85919 | Msa1393850:CDS |
| ATGGTGGTATGGAGAATCCA+AGG | 0.609099 | tig0021759:-87502 | Msa1393850:CDS |
| GCAGCTGAATCCAACAGTTG+AGG | 0.610214 | tig0021759:+87632 | None:intergenic |
| GATGAAATTGCTGAGTGGCA+AGG | 0.610794 | tig0021759:-85802 | Msa1393850:CDS |
| CAACACCTTGAGCAATAGGA+TGG | 0.611866 | tig0021759:+83961 | None:intergenic |
| ACTCTCCAAAACCCTCACTC+TGG | 0.614596 | tig0021759:-88199 | Msa1393850:CDS |
| AATCGATTTGAACTTGAAGG+TGG | 0.615528 | tig0021759:+86008 | None:intergenic |
| TGTATCACAGGCAAATGAGT+CGG | 0.622965 | tig0021759:-85848 | Msa1393850:CDS |
| CCTGACAAGGGAAAACAGAA+CGG | 0.627589 | tig0021759:+87915 | None:intergenic |
| AAATGGGAGGATGCCAAGGG+AGG | 0.627760 | tig0021759:-85824 | Msa1393850:CDS |
| CCAACCATCGACCCAATCAA+GGG | 0.629595 | tig0021759:-88091 | Msa1393850:CDS |
| TGTGTATGAGTGAGGATCAA+CGG | 0.632074 | tig0021759:+88309 | None:intergenic |
| CGGGCTCAAAAGCATCAGAT+GGG | 0.632935 | tig0021759:+85893 | None:intergenic |
| TTCGTCCAAAGGTAGAGTGG+TGG | 0.634737 | tig0021759:-87765 | Msa1393850:CDS |
| TCACTACTTATGCAGAGCGG+AGG | 0.636175 | tig0021759:-86531 | Msa1393850:CDS |
| AAGTGATGAGAAAGGAGGTG+TGG | 0.636386 | tig0021759:+88041 | None:intergenic |
| TGAATCGGTTGGGATGTCAC+GGG | 0.640289 | tig0021759:+83746 | None:intergenic |
| TGAGTGGCAAGGTCAGGAGT+GGG | 0.641061 | tig0021759:-85791 | Msa1393850:CDS |
| GTTGAGTCTGTGTATGAGTG+AGG | 0.642736 | tig0021759:+88301 | None:intergenic |
| AGTTGGTGAGCTTGATAACA+GGG | 0.645497 | tig0021759:-87693 | Msa1393850:CDS |
| CCTGAGAATACACATCATCA+GGG | 0.646341 | tig0021759:+86371 | None:intergenic |
| GAATTCGTCCAAAGGTAGAG+TGG | 0.646482 | tig0021759:-87768 | Msa1393850:CDS |
| CAAAGCTTACTATAGCGAAG+TGG | 0.648966 | tig0021759:-84114 | Msa1393850:CDS |
| AGTGATGGAGTGGATTTCAA+GGG | 0.649580 | tig0021759:+88153 | None:intergenic |
| CCAGTGCAGTGTAAAGTGGA+CGG | 0.649830 | tig0021759:+84054 | None:intergenic |
| GAGTGTGAGGGAAATGTGAG+TGG | 0.652886 | tig0021759:+88267 | None:intergenic |
| GAAATCTAAGTAGAGTGTGA+GGG | 0.656090 | tig0021759:+88255 | None:intergenic |
| TTTCAAGGGAACGAGTGTCG+AGG | 0.658695 | tig0021759:+88167 | None:intergenic |
| TAAAGAGTTTGATGGGACTG+AGG | 0.660055 | tig0021759:-87609 | Msa1393850:CDS |
| TGCAGAGCGGAGGATTGTGG+AGG | 0.661106 | tig0021759:-86521 | Msa1393850:CDS |
| ATCCCCTTTAATAACCGTCG+GGG | 0.664328 | tig0021759:+87466 | None:intergenic |
| ATCGGTTGGGATGTCACGGG+AGG | 0.669947 | tig0021759:+83749 | None:intergenic |
| ACCAATTCCAATATTCAACA+TGG | 0.671117 | tig0021759:+86477 | None:intergenic |
| CAAATGAGTCGGTAAATGGG+AGG | 0.676405 | tig0021759:-85837 | Msa1393850:CDS |
| ATCCGCATGAAATAGCCCGT+TGG | 0.682282 | tig0021759:+84138 | None:intergenic |
| TGGCTGGTGTGTCCTGACAA+GGG | 0.699195 | tig0021759:+87903 | None:intergenic |
| GGTGTAAGTGATGAGAAAGG+AGG | 0.699630 | tig0021759:+88036 | None:intergenic |
| ACTGCACTGGTGAAAGACAG+TGG | 0.714971 | tig0021759:-84041 | Msa1393850:CDS |
| TGGTATGGAGAATCCAAGGA+TGG | 0.719290 | tig0021759:-87498 | Msa1393850:CDS |
| CCACCATAAGGAAAACTAGG+TGG | 0.722795 | tig0021759:+87518 | None:intergenic |
| TGTGATGGCTGCAAAACACG+TGG | 0.723313 | tig0021759:-87831 | Msa1393850:CDS |
| GGGAGGATGAAATTGCTGAG+TGG | 0.740524 | tig0021759:-85807 | Msa1393850:CDS |
| TGGTGAGCTTGATAACAGGG+AGG | 0.768194 | tig0021759:-87690 | Msa1393850:CDS |
| GATTCACTACTTATGCAGAG+CGG | 0.818951 | tig0021759:-86534 | Msa1393850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTACAATCAATAAAATA+TGG | - | tig0021759:88249-88268 | Msa1393850:CDS | 10.0% |
| !!! | AATGTAAGCTTTATAAATAT+AGG | + | tig0021759:85804-85823 | None:intergenic | 15.0% |
| !!! | GTTAATATAATTTTTCATTC+TGG | + | tig0021759:86473-86492 | None:intergenic | 15.0% |
| !! | CTTAAAAATAAATTATGCTT+GGG | + | tig0021759:87571-87590 | None:intergenic | 15.0% |
| !! | TCTTAAAAATAAATTATGCT+TGG | + | tig0021759:87572-87591 | None:intergenic | 15.0% |
| !!! | ATAATATATACTTTCTTTTC+TGG | - | tig0021759:87655-87674 | Msa1393850:CDS | 15.0% |
| !! | AGAATAATTAATATAAAGCT+CGG | - | tig0021759:87806-87825 | Msa1393850:CDS | 15.0% |
| !! | ATAATAATAAACCAATGAAT+CGG | + | tig0021759:88351-88370 | None:intergenic | 15.0% |
| !! | GTAACTAATATGAAAACAAT+TGG | - | tig0021759:84907-84926 | Msa1393850:intron | 20.0% |
| !!! | TCTTAAGTTGTTTATTTCAT+TGG | - | tig0021759:85403-85422 | Msa1393850:intron | 20.0% |
| !! | TTAAAACACGAAAAATAATC+AGG | + | tig0021759:85837-85856 | None:intergenic | 20.0% |
| !!! | ACTTGTACTTTATTTATTAG+TGG | - | tig0021759:85984-86003 | Msa1393850:CDS | 20.0% |
| !!! | ATATAATTTTTCATTCTGGT+AGG | + | tig0021759:86469-86488 | None:intergenic | 20.0% |
| !!! | AAAAACATTGATTTTTCCTA+CGG | - | tig0021759:86499-86518 | Msa1393850:CDS | 20.0% |
| !! | ATAGTAAAATGAGTTAATGA+AGG | + | tig0021759:86726-86745 | None:intergenic | 20.0% |
| !!! | TTTTTATATTGCTTCATAGA+TGG | - | tig0021759:87179-87198 | Msa1393850:intron | 20.0% |
| !! | ATCAAAGGTTAAATATTTGA+TGG | + | tig0021759:87492-87511 | None:intergenic | 20.0% |
| !! | TAATATAATGACCAACATAA+TGG | + | tig0021759:87703-87722 | None:intergenic | 20.0% |
| !! | TGGTTTATTATTATAGATTG+AGG | - | tig0021759:88357-88376 | Msa1393850:five_prime_UTR | 20.0% |
| !! | GGTTTATTATTATAGATTGA+GGG | - | tig0021759:88358-88377 | Msa1393850:five_prime_UTR | 20.0% |
| !! | AATTGCTTATACTTTGTATT+CGG | - | tig0021759:88411-88430 | Msa1393850:five_prime_UTR | 20.0% |
| !!! | TGTTTTGTTAAACTTGATTG+AGG | + | tig0021759:83680-83699 | None:intergenic | 25.0% |
| !!! | TGTTTTTTGTTGAAAGTTTG+AGG | + | tig0021759:84108-84127 | None:intergenic | 25.0% |
| ! | ATTGTTTGGAAATTATGAGT+GGG | - | tig0021759:84515-84534 | Msa1393850:intron | 25.0% |
| !! | TTGTTTTCCTAAACTATTAC+GGG | + | tig0021759:84884-84903 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCCTAAACTATTA+CGG | + | tig0021759:84885-84904 | None:intergenic | 25.0% |
| ! | CACAAATACTAAAGCAATTA+AGG | + | tig0021759:85038-85057 | None:intergenic | 25.0% |
| !! | GCAAAGGTTACATTTTTAAT+TGG | + | tig0021759:85313-85332 | None:intergenic | 25.0% |
| ! | AGATAAAGATTCCAAAACAA+AGG | + | tig0021759:85386-85405 | None:intergenic | 25.0% |
| !! | AAAGGTCAAATGTTTAACTT+TGG | + | tig0021759:85496-85515 | None:intergenic | 25.0% |
| !! | CAATGCATATTTTGTCATAT+TGG | - | tig0021759:85955-85974 | Msa1393850:CDS | 25.0% |
| ! | TACAATTGTCTTATATACAC+TGG | + | tig0021759:86215-86234 | None:intergenic | 25.0% |
| ! | ATATAAGACAATTGTATCAC+AGG | - | tig0021759:86219-86238 | Msa1393850:intron | 25.0% |
| ! | AGTAAAAGAAATGAAAGGAA+AGG | + | tig0021759:86773-86792 | None:intergenic | 25.0% |
| ! | AGTAAGTTAGACTATTGAAA+TGG | - | tig0021759:87008-87027 | Msa1393850:intron | 25.0% |
| ! | AGTAAGTAGAATGAAATCAA+GGG | + | tig0021759:87036-87055 | None:intergenic | 25.0% |
| ! | ATATGGTCTGGAAAATATAT+AGG | - | tig0021759:87213-87232 | Msa1393850:intron | 25.0% |
| ! | ATTTATAGAACTGAAAGCTA+AGG | + | tig0021759:87254-87273 | None:intergenic | 25.0% |
| !! | AAATATTTGATGGCTAACTT+AGG | + | tig0021759:87482-87501 | None:intergenic | 25.0% |
| ! | TTTAAAGGTTCATATTTCAG+AGG | + | tig0021759:87540-87559 | None:intergenic | 25.0% |
| !!! | TATATACTTTCTTTTCTGGT+AGG | - | tig0021759:87659-87678 | Msa1393850:CDS | 25.0% |
| !! | TTATATTGCTCTTTTGCTTT+TGG | - | tig0021759:87746-87765 | Msa1393850:CDS | 25.0% |
| ! | ATAATTAATATAAAGCTCGG+TGG | - | tig0021759:87809-87828 | Msa1393850:CDS | 25.0% |
| ! | TATGTTGTATAATATTGTGC+AGG | - | tig0021759:87851-87870 | Msa1393850:CDS | 25.0% |
| !!! | TATAGAAGCATCAGAATAAA+AGG | + | tig0021759:88278-88297 | None:intergenic | 25.0% |
| ! | TTTTTGTTGAAAGTTTGAGG+AGG | + | tig0021759:84105-84124 | None:intergenic | 30.0% |
| GACATTGAGTATAGACAAAA+GGG | + | tig0021759:84131-84150 | None:intergenic | 30.0% | |
| TGACATTGAGTATAGACAAA+AGG | + | tig0021759:84132-84151 | None:intergenic | 30.0% | |
| !!! | ATTCTTTTGGAACATTCAAC+CGG | + | tig0021759:84221-84240 | None:intergenic | 30.0% |
| GAATGTTCCAAAAGAATTGA+CGG | - | tig0021759:84224-84243 | Msa1393850:intron | 30.0% | |
| !! | ATGATGATGATGAGTGTTTT+GGG | - | tig0021759:84289-84308 | Msa1393850:intron | 30.0% |
| GATTGTTTGGAAATTATGAG+TGG | - | tig0021759:84514-84533 | Msa1393850:intron | 30.0% | |
| ! | ACAAGACCAATGAACATTTT+TGG | - | tig0021759:84700-84719 | Msa1393850:intron | 30.0% |
| ! | TGTTTTCCTAAACTATTACG+GGG | + | tig0021759:84883-84902 | None:intergenic | 30.0% |
| ! | GCAATTAAGGCTATGTTTTT+GGG | + | tig0021759:85025-85044 | None:intergenic | 30.0% |
| ! | AGCAATTAAGGCTATGTTTT+TGG | + | tig0021759:85026-85045 | None:intergenic | 30.0% |
| CTAGTCTGAAAATTTACTTG+TGG | - | tig0021759:85119-85138 | Msa1393850:intron | 30.0% | |
| TTCTCGTTATGTATATAACG+AGG | + | tig0021759:85163-85182 | None:intergenic | 30.0% | |
| AGAAAAATCACTACAGAAAC+AGG | - | tig0021759:85179-85198 | Msa1393850:intron | 30.0% | |
| ! | TTATTATATATGTGCTGCTC+CGG | - | tig0021759:85208-85227 | Msa1393850:intron | 30.0% |
| AACATGCAAACTGTAAAAAC+CGG | + | tig0021759:85230-85249 | None:intergenic | 30.0% | |
| AAGAATGCAAAAACTAGCAA+AGG | + | tig0021759:85329-85348 | None:intergenic | 30.0% | |
| ! | TTTTGCATTCTTCCTTTGAT+TGG | - | tig0021759:85337-85356 | Msa1393850:intron | 30.0% |
| !! | AAACCAAGAAACCTTTGTTT+TGG | - | tig0021759:85372-85391 | Msa1393850:intron | 30.0% |
| ATTCCAAAACAAAGGTTTCT+TGG | + | tig0021759:85378-85397 | None:intergenic | 30.0% | |
| ! | GTTTATTTCATTGGTTGACA+TGG | - | tig0021759:85412-85431 | Msa1393850:intron | 30.0% |
| ! | GTCAAATGTTTAACTTTGGT+AGG | + | tig0021759:85492-85511 | None:intergenic | 30.0% |
| AATCAACAATGACGACTTAA+AGG | + | tig0021759:85514-85533 | None:intergenic | 30.0% | |
| !! | TCATTGTTGATTGTGGTTTT+AGG | - | tig0021759:85522-85541 | Msa1393850:intron | 30.0% |
| !! | CATTGTTGATTGTGGTTTTA+GGG | - | tig0021759:85523-85542 | Msa1393850:intron | 30.0% |
| AAAAGAGCCATGTTGAATAT+TGG | - | tig0021759:85595-85614 | Msa1393850:intron | 30.0% | |
| ACCAATTCCAATATTCAACA+TGG | + | tig0021759:85605-85624 | None:intergenic | 30.0% | |
| TGTTGAATATTGGAATTGGT+TGG | - | tig0021759:85605-85624 | Msa1393850:intron | 30.0% | |
| GACTAAGCTAAAAAATAACC+AGG | - | tig0021759:85675-85694 | Msa1393850:intron | 30.0% | |
| AAGCTAAAAAATAACCAGGA+AGG | - | tig0021759:85679-85698 | Msa1393850:intron | 30.0% | |
| !!! | TTCATTTGCTGTTTTTGTTC+TGG | - | tig0021759:85923-85942 | Msa1393850:CDS | 30.0% |
| !!! | TCATTTGCTGTTTTTGTTCT+GGG | - | tig0021759:85924-85943 | Msa1393850:CDS | 30.0% |
| !! | ATCAATCGATTTGAACTTGA+AGG | + | tig0021759:86077-86096 | None:intergenic | 30.0% |
| TGAGAAGCTTCAATAGATTT+CGG | + | tig0021759:86334-86353 | None:intergenic | 30.0% | |
| TCTTAAGTTCTCAACAACTA+TGG | + | tig0021759:86400-86419 | None:intergenic | 30.0% | |
| ! | TCAATCAAGTTGCCAAATAA+GGG | + | tig0021759:86600-86619 | None:intergenic | 30.0% |
| ! | ATCAATCAAGTTGCCAAATA+AGG | + | tig0021759:86601-86620 | None:intergenic | 30.0% |
| !! | ATGAGCTGCTCATTTTTATA+TGG | - | tig0021759:86630-86649 | Msa1393850:intron | 30.0% |
| ! | ACTCATTTTACTATTACTGC+TGG | - | tig0021759:86732-86751 | Msa1393850:intron | 30.0% |
| AACAGAAAGAGAATAAAGAG+GGG | + | tig0021759:86797-86816 | None:intergenic | 30.0% | |
| GAACAGAAAGAGAATAAAGA+GGG | + | tig0021759:86798-86817 | None:intergenic | 30.0% | |
| TGAACAGAAAGAGAATAAAG+AGG | + | tig0021759:86799-86818 | None:intergenic | 30.0% | |
| AATTTATCAAATAGCAGCCA+TGG | - | tig0021759:86818-86837 | Msa1393850:intron | 30.0% | |
| ACGTTTAATGGCAGAAATAA+TGG | - | tig0021759:86905-86924 | Msa1393850:intron | 30.0% | |
| !!! | AAATAGCTGATTTTTTGCCA+TGG | - | tig0021759:86932-86951 | Msa1393850:intron | 30.0% |
| !!! | TCTTATCGATTTTGGATAGT+GGG | + | tig0021759:86958-86977 | None:intergenic | 30.0% |
| CAGTAAGTAGAATGAAATCA+AGG | + | tig0021759:87037-87056 | None:intergenic | 30.0% | |
| ! | TTCTACTTACTGACTAGAAT+AGG | - | tig0021759:87045-87064 | Msa1393850:intron | 30.0% |
| CTAGTGTCATACATTTCTAT+TGG | - | tig0021759:87277-87296 | Msa1393850:intron | 30.0% | |
| ATCAAAGTTGTGATCATCAA+AGG | + | tig0021759:87507-87526 | None:intergenic | 30.0% | |
| ATCTGAATCCAAAGATTATG+AGG | - | tig0021759:87902-87921 | Msa1393850:CDS | 30.0% | |
| ATCCAAAGATTATGAGGTTA+AGG | - | tig0021759:87908-87927 | Msa1393850:CDS | 30.0% | |
| GAGAAAACGTTAAAAGAAGT+TGG | - | tig0021759:87987-88006 | Msa1393850:CDS | 30.0% | |
| AAACGTTAAAAGAAGTTGGA+AGG | - | tig0021759:87991-88010 | Msa1393850:CDS | 30.0% | |
| AATAAACCAATGAATCGGTT+GGG | + | tig0021759:88346-88365 | None:intergenic | 30.0% | |
| TAATAAACCAATGAATCGGT+TGG | + | tig0021759:88347-88366 | None:intergenic | 30.0% | |
| GAAATCTAAGTAGAGTGTGA+GGG | + | tig0021759:83827-83846 | None:intergenic | 35.0% | |
| ! | TGAGTTTAGAACCCTTGATT+GGG | + | tig0021759:84002-84021 | None:intergenic | 35.0% |
| !! | AGCCATTAGGGTTTGTTATT+CGG | - | tig0021759:84194-84213 | Msa1393850:CDS | 35.0% |
| !!! | TTCTTTTGGAACATTCAACC+GGG | + | tig0021759:84220-84239 | None:intergenic | 35.0% |
| !! | GATGATGATGATGAGTGTTT+TGG | - | tig0021759:84288-84307 | Msa1393850:intron | 35.0% |
| ACTGCAAATGCAAATAGGTA+AGG | + | tig0021759:84369-84388 | None:intergenic | 35.0% | |
| TACCTATTTGCATTTGCAGT+TGG | - | tig0021759:84369-84388 | Msa1393850:intron | 35.0% | |
| ATACCACCATAAGGAAAACT+AGG | + | tig0021759:84567-84586 | None:intergenic | 35.0% | |
| ! | TAGTTTTCCTTATGGTGGTA+TGG | - | tig0021759:84566-84585 | Msa1393850:intron | 35.0% |
| GTTGAGCCAAAAATGTTCAT+TGG | + | tig0021759:84709-84728 | None:intergenic | 35.0% | |
| GTATACCTTTCGTACATGTT+TGG | - | tig0021759:84750-84769 | Msa1393850:intron | 35.0% | |
| TCAATCCAAACATGTACGAA+AGG | + | tig0021759:84758-84777 | None:intergenic | 35.0% | |
| AGTATTTGTGTGTCTGCAAA+TGG | - | tig0021759:85048-85067 | Msa1393850:intron | 35.0% | |
| GTATTTGTGTGTCTGCAAAT+GGG | - | tig0021759:85049-85068 | Msa1393850:intron | 35.0% | |
| CATAAGCAAACCAGAATATG+AGG | + | tig0021759:85082-85101 | None:intergenic | 35.0% | |
| GGAGCAGCACATATATAATA+AGG | + | tig0021759:85209-85228 | None:intergenic | 35.0% | |
| ! | TATTGTCGCTTCATCATTGT+AGG | - | tig0021759:85256-85275 | Msa1393850:intron | 35.0% |
| !!! | TCCTTTGATTGGCTTTCTTT+TGG | - | tig0021759:85348-85367 | Msa1393850:intron | 35.0% |
| TCCAAAAGAAAGCCAATCAA+AGG | + | tig0021759:85352-85371 | None:intergenic | 35.0% | |
| TGGTTGACATGGAGAAAAAT+TGG | - | tig0021759:85423-85442 | Msa1393850:intron | 35.0% | |
| ! | TAAGTCGTCATTGTTGATTG+TGG | - | tig0021759:85515-85534 | Msa1393850:intron | 35.0% |
| GCCATGTTGAATATTGGAAT+TGG | - | tig0021759:85601-85620 | Msa1393850:intron | 35.0% | |
| TGAATATTGGAATTGGTTGG+AGG | - | tig0021759:85608-85627 | Msa1393850:intron | 35.0% | |
| GAATATTGGAATTGGTTGGA+GGG | - | tig0021759:85609-85628 | Msa1393850:intron | 35.0% | |
| AATATTGGAATTGGTTGGAG+GGG | - | tig0021759:85610-85629 | Msa1393850:intron | 35.0% | |
| GTTTAAATGAGGATGTAGAG+AGG | - | tig0021759:85632-85651 | Msa1393850:intron | 35.0% | |
| AACTGGAAACCTTTCTCATA+TGG | + | tig0021759:85736-85755 | None:intergenic | 35.0% | |
| TTCTTGCGAAATGTACAGAT+TGG | - | tig0021759:86010-86029 | Msa1393850:CDS | 35.0% | |
| TCTTGCGAAATGTACAGATT+GGG | - | tig0021759:86011-86030 | Msa1393850:CDS | 35.0% | |
| TTCAGAAACTCATCAAATGC+AGG | + | tig0021759:86040-86059 | None:intergenic | 35.0% | |
| !! | AATCGATTTGAACTTGAAGG+TGG | + | tig0021759:86074-86093 | None:intergenic | 35.0% |
| !! | TGTTTGCTTTAAGGAAGTCA+AGG | + | tig0021759:86111-86130 | None:intergenic | 35.0% |
| CAATCTTATTCTCTATGCCA+GGG | + | tig0021759:86135-86154 | None:intergenic | 35.0% | |
| TCAATCTTATTCTCTATGCC+AGG | + | tig0021759:86136-86155 | None:intergenic | 35.0% | |
| ATAAGATTGACCTTGTACTG+TGG | - | tig0021759:86146-86165 | Msa1393850:intron | 35.0% | |
| TGTCTTATATACACTGGAGT+CGG | + | tig0021759:86209-86228 | None:intergenic | 35.0% | |
| GAAATCTATTGAAGCTTCTC+AGG | - | tig0021759:86333-86352 | Msa1393850:CDS | 35.0% | |
| TAAGTTCTCAACAACTATGG+CGG | + | tig0021759:86397-86416 | None:intergenic | 35.0% | |
| TTAAGATCAACATCCTACCT+AGG | - | tig0021759:86414-86433 | Msa1393850:CDS | 35.0% | |
| ACATTGTATGTGCCCTTATT+TGG | - | tig0021759:86585-86604 | Msa1393850:intron | 35.0% | |
| AACTGATCACTACATGTTTG+TGG | - | tig0021759:86692-86711 | Msa1393850:intron | 35.0% | |
| TTTACTATTACTGCTGGTCA+TGG | - | tig0021759:86738-86757 | Msa1393850:intron | 35.0% | |
| TTACTATTACTGCTGGTCAT+GGG | - | tig0021759:86739-86758 | Msa1393850:intron | 35.0% | |
| GGGGAAGTAAAAGAAATGAA+AGG | + | tig0021759:86778-86797 | None:intergenic | 35.0% | |
| !!! | GGATTTTTTGCCTATTGCTA+TGG | - | tig0021759:86854-86873 | Msa1393850:intron | 35.0% |
| TACAAATTGGCCATAGCAAT+AGG | + | tig0021759:86867-86886 | None:intergenic | 35.0% | |
| TTGCTATGGCCAATTTGTAA+AGG | - | tig0021759:86868-86887 | Msa1393850:intron | 35.0% | |
| CACTGTCATCCTTTACAAAT+TGG | + | tig0021759:86880-86899 | None:intergenic | 35.0% | |
| !!! | GTCTTATCGATTTTGGATAG+TGG | + | tig0021759:86959-86978 | None:intergenic | 35.0% |
| ! | TCTTGAGAATTGGTTGTTTC+TGG | - | tig0021759:87092-87111 | Msa1393850:intron | 35.0% |
| AGATGGAGAGATGTGATATA+TGG | - | tig0021759:87196-87215 | Msa1393850:intron | 35.0% | |
| GGATTTGATATGTTAGTCAC+TGG | - | tig0021759:87298-87317 | Msa1393850:intron | 35.0% | |
| !! | ACAATATTGAAGAGTGCTTC+AGG | - | tig0021759:87332-87351 | Msa1393850:intron | 35.0% |
| !!! | GCTTGGGTGTATTGTTTTAA+AGG | + | tig0021759:87555-87574 | None:intergenic | 35.0% |
| ! | ATATAAAGGAGGTTTGGTAG+TGG | + | tig0021759:87606-87625 | None:intergenic | 35.0% |
| AGAATAAGAATGAGCAGCAT+GGG | + | tig0021759:87631-87650 | None:intergenic | 35.0% | |
| TAGAATAAGAATGAGCAGCA+TGG | + | tig0021759:87632-87651 | None:intergenic | 35.0% | |
| CAGTTCATATGCCATTATGT+TGG | - | tig0021759:87689-87708 | Msa1393850:CDS | 35.0% | |
| TCCACTTTAAGCTCTTCAAA+AGG | - | tig0021759:87769-87788 | Msa1393850:CDS | 35.0% | |
| !! | TCCTTTTGAAGAGCTTAAAG+TGG | + | tig0021759:87773-87792 | None:intergenic | 35.0% |
| ! | TTAATATAAAGCTCGGTGGA+AGG | - | tig0021759:87813-87832 | Msa1393850:CDS | 35.0% |
| CACCTTAACCTCATAATCTT+TGG | + | tig0021759:87913-87932 | None:intergenic | 35.0% | |
| !! | TTAAGGTGTCATTTCTCCAA+CGG | - | tig0021759:87925-87944 | Msa1393850:CDS | 35.0% |
| CTACATATGCTTGCCAAAAA+TGG | + | tig0021759:88150-88169 | None:intergenic | 35.0% | |
| ! | TTGTTGTTGTTGTTGGAGAG+TGG | + | tig0021759:83744-83763 | None:intergenic | 40.0% |
| CTCTCCAACAACAACAACAA+TGG | - | tig0021759:83744-83763 | Msa1393850:three_prime_UTR | 40.0% | |
| TGTGTATGAGTGAGGATCAA+CGG | + | tig0021759:83773-83792 | None:intergenic | 40.0% | |
| GGAAATCTAAGTAGAGTGTG+AGG | + | tig0021759:83828-83847 | None:intergenic | 40.0% | |
| AAGCGTGAATGGTTGAAGAT+GGG | + | tig0021759:83849-83868 | None:intergenic | 40.0% | |
| ! | AGTGATGGAGTGGATTTCAA+GGG | + | tig0021759:83929-83948 | None:intergenic | 40.0% |
| ! | GTGAGTTTAGAACCCTTGAT+TGG | + | tig0021759:84003-84022 | None:intergenic | 40.0% |
| ATTGAAGAGCAGAGGAAGAA+GGG | + | tig0021759:84074-84093 | None:intergenic | 40.0% | |
| GAATAACAAACCCTAATGGC+TGG | + | tig0021759:84195-84214 | None:intergenic | 40.0% | |
| ! | ATCACAGCCGTCAATTCTTT+TGG | + | tig0021759:84234-84253 | None:intergenic | 40.0% |
| AAAAGAATTGACGGCTGTGA+TGG | - | tig0021759:84233-84252 | Msa1393850:intron | 40.0% | |
| !!! | TGTTTTGGGAATTCGTCCAA+AGG | - | tig0021759:84303-84322 | Msa1393850:intron | 40.0% |
| GCAAATAGGTAAGGTGGAAT+TGG | + | tig0021759:84360-84379 | None:intergenic | 40.0% | |
| GCAAATGCAAATAGGTAAGG+TGG | + | tig0021759:84366-84385 | None:intergenic | 40.0% | |
| CACCAACTGCAAATGCAAAT+AGG | + | tig0021759:84374-84393 | None:intergenic | 40.0% | |
| !! | AGTTGGTGAGCTTGATAACA+GGG | - | tig0021759:84386-84405 | Msa1393850:intron | 40.0% |
| TCAGCTGCTAAAGAGTTTGA+TGG | - | tig0021759:84462-84481 | Msa1393850:intron | 40.0% | |
| CAGCTGCTAAAGAGTTTGAT+GGG | - | tig0021759:84463-84482 | Msa1393850:intron | 40.0% | |
| TAAAGAGTTTGATGGGACTG+AGG | - | tig0021759:84470-84489 | Msa1393850:intron | 40.0% | |
| ATGGGACTGAGGATATGATT+AGG | - | tig0021759:84481-84500 | Msa1393850:intron | 40.0% | |
| TGGGACTGAGGATATGATTA+GGG | - | tig0021759:84482-84501 | Msa1393850:intron | 40.0% | |
| ACTGAGGATATGATTAGGGA+AGG | - | tig0021759:84486-84505 | Msa1393850:intron | 40.0% | |
| CTGAGGATATGATTAGGGAA+GGG | - | tig0021759:84487-84506 | Msa1393850:intron | 40.0% | |
| TGAGGATATGATTAGGGAAG+GGG | - | tig0021759:84488-84507 | Msa1393850:intron | 40.0% | |
| !! | GTGGGAGAGATTTGATTTGT+TGG | - | tig0021759:84533-84552 | Msa1393850:intron | 40.0% |
| !! | TTGCCACCTAGTTTTCCTTA+TGG | - | tig0021759:84558-84577 | Msa1393850:intron | 40.0% |
| GTTATTAAAGGGGATGCAAC+CGG | - | tig0021759:84621-84640 | Msa1393850:intron | 40.0% | |
| !!! | TGAACATTTTTGGCTCAACG+AGG | - | tig0021759:84710-84729 | Msa1393850:intron | 40.0% |
| GATTCACTACTTATGCAGAG+CGG | - | tig0021759:85545-85564 | Msa1393850:intron | 40.0% | |
| AGAGAGGTTCAAGGACAATA+TGG | - | tig0021759:85648-85667 | Msa1393850:intron | 40.0% | |
| CCTGAGAATACACATCATCA+GGG | + | tig0021759:85711-85730 | None:intergenic | 40.0% | |
| ACCTGAGAATACACATCATC+AGG | + | tig0021759:85712-85731 | None:intergenic | 40.0% | |
| TCTCAGGTTCCATATGAGAA+AGG | - | tig0021759:85724-85743 | Msa1393850:intron | 40.0% | |
| TTCCTTAAAGCAAACATCCC+TGG | - | tig0021759:86115-86134 | Msa1393850:intron | 40.0% | |
| GTCTTATATACACTGGAGTC+GGG | + | tig0021759:86208-86227 | None:intergenic | 40.0% | |
| TGTATCACAGGCAAATGAGT+CGG | - | tig0021759:86231-86250 | Msa1393850:intron | 40.0% | |
| AGGCAAATGAGTCGGTAAAT+GGG | - | tig0021759:86239-86258 | Msa1393850:intron | 40.0% | |
| ATCAACATCCTACCTAGGAT+CGG | - | tig0021759:86419-86438 | Msa1393850:CDS | 40.0% | |
| TGTTGTACCTCATAACGAGT+TGG | + | tig0021759:86526-86545 | None:intergenic | 40.0% | |
| CAAAATTGCTGCACTCTTAG+AGG | - | tig0021759:86669-86688 | Msa1393850:intron | 40.0% | |
| GACAGTGTCATGACGTTTAA+TGG | - | tig0021759:86893-86912 | Msa1393850:intron | 40.0% | |
| !!! | GGGAACAGTCTTATCGATTT+TGG | + | tig0021759:86966-86985 | None:intergenic | 40.0% |
| ACACCAGAAAGAATCCTAGA+CGG | + | tig0021759:86987-87006 | None:intergenic | 40.0% | |
| ATGTGTCTGCTCTTGAGAAT+TGG | - | tig0021759:87082-87101 | Msa1393850:intron | 40.0% | |
| GAGAGATGTGATATATGGTC+TGG | - | tig0021759:87201-87220 | Msa1393850:intron | 40.0% | |
| GCCTAGAAATTCGTGTTTAG+TGG | - | tig0021759:87360-87379 | Msa1393850:intron | 40.0% | |
| GCCACTAAACACGAATTTCT+AGG | + | tig0021759:87364-87383 | None:intergenic | 40.0% | |
| CTCGTTAAAACAGTGCAGAA+AGG | - | tig0021759:87383-87402 | Msa1393850:CDS | 40.0% | |
| TGGGCTATATAAAGGAGGTT+TGG | + | tig0021759:87612-87631 | None:intergenic | 40.0% | |
| ! | TAGTTTGTAGCGTGAATCCA+AGG | + | tig0021759:87883-87902 | None:intergenic | 40.0% |
| !! | TAAGGTGTCATTTCTCCAAC+GGG | - | tig0021759:87926-87945 | Msa1393850:CDS | 40.0% |
| CAAAGCTTACTATAGCGAAG+TGG | - | tig0021759:87965-87984 | Msa1393850:CDS | 40.0% | |
| !!! | TGCCAAGAGACTTTTTTCTG+AGG | - | tig0021759:88082-88101 | Msa1393850:CDS | 40.0% |
| AGCCTCAGAAAAAAGTCTCT+TGG | + | tig0021759:88087-88106 | None:intergenic | 40.0% | |
| TGTTACCATCCTATTGCTCA+AGG | - | tig0021759:88113-88132 | Msa1393850:CDS | 40.0% | |
| TCAACAACACCTTGAGCAAT+AGG | + | tig0021759:88125-88144 | None:intergenic | 40.0% | |
| !! | TATTGCTCAAGGTGTTGTTG+AGG | - | tig0021759:88124-88143 | Msa1393850:CDS | 40.0% |
| TGTTGGAGAGTGGAGAAGAT+GGG | + | tig0021759:83734-83753 | None:intergenic | 45.0% | |
| TTGTTGGAGAGTGGAGAAGA+TGG | + | tig0021759:83735-83754 | None:intergenic | 45.0% | |
| !! | GGTGCCATTGTTGTTGTTGT+TGG | + | tig0021759:83751-83770 | None:intergenic | 45.0% |
| GTGTATGAGTGAGGATCAAC+GGG | + | tig0021759:83772-83791 | None:intergenic | 45.0% | |
| GTTGAGTCTGTGTATGAGTG+AGG | + | tig0021759:83781-83800 | None:intergenic | 45.0% | |
| GAAGCGTGAATGGTTGAAGA+TGG | + | tig0021759:83850-83869 | None:intergenic | 45.0% | |
| ! | CAGTGATGGAGTGGATTTCA+AGG | + | tig0021759:83930-83949 | None:intergenic | 45.0% |
| !! | GGATTGGAGTGGATTGAGAA+GGG | + | tig0021759:83954-83973 | None:intergenic | 45.0% |
| TGGTTGGAGAGAGGGAAAAA+GGG | + | tig0021759:83975-83994 | None:intergenic | 45.0% | |
| ATGGTTGGAGAGAGGGAAAA+AGG | + | tig0021759:83976-83995 | None:intergenic | 45.0% | |
| GGTGTGGTTAGAAAGAGTGA+GGG | + | tig0021759:84025-84044 | None:intergenic | 45.0% | |
| AGGTGTGGTTAGAAAGAGTG+AGG | + | tig0021759:84026-84045 | None:intergenic | 45.0% | |
| AAGTGATGAGAAAGGAGGTG+TGG | + | tig0021759:84041-84060 | None:intergenic | 45.0% | |
| GGTGTAAGTGATGAGAAAGG+AGG | + | tig0021759:84046-84065 | None:intergenic | 45.0% | |
| GGTGGTGTAAGTGATGAGAA+AGG | + | tig0021759:84049-84068 | None:intergenic | 45.0% | |
| TTGAAGAGCAGAGGAAGAAG+GGG | + | tig0021759:84073-84092 | None:intergenic | 45.0% | |
| CATTGAAGAGCAGAGGAAGA+AGG | + | tig0021759:84075-84094 | None:intergenic | 45.0% | |
| CTTCTTCCTCTGCTCTTCAA+TGG | - | tig0021759:84073-84092 | Msa1393850:CDS | 45.0% | |
| TAAGAGCCATTGAAGAGCAG+AGG | + | tig0021759:84082-84101 | None:intergenic | 45.0% | |
| GAAAACAGAACGGGCATGAA+TGG | + | tig0021759:84157-84176 | None:intergenic | 45.0% | |
| CTGACAAGGGAAAACAGAAC+GGG | + | tig0021759:84166-84185 | None:intergenic | 45.0% | |
| CCTGACAAGGGAAAACAGAA+CGG | + | tig0021759:84167-84186 | None:intergenic | 45.0% | |
| GGCCGAATAACAAACCCTAA+TGG | + | tig0021759:84199-84218 | None:intergenic | 45.0% | |
| !! | TTAGGGTTTGTTATTCGGCC+CGG | - | tig0021759:84199-84218 | Msa1393850:CDS | 45.0% |
| GAATTCGTCCAAAGGTAGAG+TGG | - | tig0021759:84311-84330 | Msa1393850:intron | 45.0% | |
| ! | AGTGGTGGAAGAGTTTGAGA+TGG | - | tig0021759:84329-84348 | Msa1393850:intron | 45.0% |
| !! | CAGTTGGTGAGCTTGATAAC+AGG | - | tig0021759:84385-84404 | Msa1393850:intron | 45.0% |
| TCAGCATAAACCCTAGTCCT+GGG | + | tig0021759:84420-84439 | None:intergenic | 45.0% | |
| TTCAGCATAAACCCTAGTCC+TGG | + | tig0021759:84421-84440 | None:intergenic | 45.0% | |
| AGGGAAGGGGAAAGATTGTT+TGG | - | tig0021759:84501-84520 | Msa1393850:intron | 45.0% | |
| CCACCATAAGGAAAACTAGG+TGG | + | tig0021759:84564-84583 | None:intergenic | 45.0% | |
| !! | CCACCTAGTTTTCCTTATGG+TGG | - | tig0021759:84561-84580 | Msa1393850:intron | 45.0% |
| GGATTCTCCATACCACCATA+AGG | + | tig0021759:84576-84595 | None:intergenic | 45.0% | |
| ATGGTGGTATGGAGAATCCA+AGG | - | tig0021759:84577-84596 | Msa1393850:intron | 45.0% | |
| TGGTATGGAGAATCCAAGGA+TGG | - | tig0021759:84581-84600 | Msa1393850:intron | 45.0% | |
| TTGACCCCGACGGTTATTAA+AGG | - | tig0021759:84609-84628 | Msa1393850:intron | 45.0% | |
| TGACCCCGACGGTTATTAAA+GGG | - | tig0021759:84610-84629 | Msa1393850:intron | 45.0% | |
| ATCCCCTTTAATAACCGTCG+GGG | + | tig0021759:84616-84635 | None:intergenic | 45.0% | |
| CATCCCCTTTAATAACCGTC+GGG | + | tig0021759:84617-84636 | None:intergenic | 45.0% | |
| GCATCCCCTTTAATAACCGT+CGG | + | tig0021759:84618-84637 | None:intergenic | 45.0% | |
| ! | CTCATGAACTTGCTCATAGC+TGG | - | tig0021759:84658-84677 | Msa1393850:intron | 45.0% |
| TAAACTATTACGGGGAGCTG+TGG | + | tig0021759:84875-84894 | None:intergenic | 45.0% | |
| ACAGCTCCCCGTAATAGTTT+AGG | - | tig0021759:84874-84893 | Msa1393850:intron | 45.0% | |
| GGGAAAGTCTCCTCATATTC+TGG | - | tig0021759:85069-85088 | Msa1393850:intron | 45.0% | |
| TGGTTGGAGGGGTTTAAATG+AGG | - | tig0021759:85621-85640 | Msa1393850:intron | 45.0% | |
| TGAGGATGTAGAGAGGTTCA+AGG | - | tig0021759:85639-85658 | Msa1393850:intron | 45.0% | |
| ! | CCCTGATGATGTGTATTCTC+AGG | - | tig0021759:85708-85727 | Msa1393850:intron | 45.0% |
| GTTCAATGCGCAACAAGAAC+TGG | + | tig0021759:85753-85772 | None:intergenic | 45.0% | |
| TGCCAGGGATGTTTGCTTTA+AGG | + | tig0021759:86120-86139 | None:intergenic | 45.0% | |
| TACCTTCTGTCCACAGTACA+AGG | + | tig0021759:86159-86178 | None:intergenic | 45.0% | |
| CAGGCAAATGAGTCGGTAAA+TGG | - | tig0021759:86238-86257 | Msa1393850:intron | 45.0% | |
| CAAATGAGTCGGTAAATGGG+AGG | - | tig0021759:86242-86261 | Msa1393850:intron | 45.0% | |
| TCAGCAATTTCATCCTCCCT+TGG | + | tig0021759:86271-86290 | None:intergenic | 45.0% | |
| GATGAAATTGCTGAGTGGCA+AGG | - | tig0021759:86277-86296 | Msa1393850:intron | 45.0% | |
| ! | CAACTATGGCGGAAACAGAA+AGG | + | tig0021759:86386-86405 | None:intergenic | 45.0% |
| TCAACATCCTACCTAGGATC+GGG | - | tig0021759:86420-86439 | Msa1393850:CDS | 45.0% | |
| ATCCAAACCACAATCTGCCA+TGG | + | tig0021759:86838-86857 | None:intergenic | 45.0% | |
| ! | TTCCCGTCTAGGATTCTTTC+TGG | - | tig0021759:86981-87000 | Msa1393850:intron | 45.0% |
| CACCAGAAAGAATCCTAGAC+GGG | + | tig0021759:86986-87005 | None:intergenic | 45.0% | |
| ! | CAGCATGGGCTATATAAAGG+AGG | + | tig0021759:87617-87636 | None:intergenic | 45.0% |
| ! | GAGCAGCATGGGCTATATAA+AGG | + | tig0021759:87620-87639 | None:intergenic | 45.0% |
| ! | TATAAAGCTCGGTGGAAGGT+TGG | - | tig0021759:87817-87836 | Msa1393850:CDS | 45.0% |
| TATTGTGCAGGTCTTAGCCT+TGG | - | tig0021759:87863-87882 | Msa1393850:CDS | 45.0% | |
| TTCACCAGTGCAGTGTAAAG+TGG | + | tig0021759:88032-88051 | None:intergenic | 45.0% | |
| CAACACCTTGAGCAATAGGA+TGG | + | tig0021759:88121-88140 | None:intergenic | 45.0% | |
| !!! | GGTGTTGTTGAGGCCATTTT+TGG | - | tig0021759:88134-88153 | Msa1393850:CDS | 45.0% |
| ATGAATCGGTTGGGATGTCA+CGG | + | tig0021759:88337-88356 | None:intergenic | 45.0% | |
| ! | TGACATCCCAACCGATTCAT+TGG | - | tig0021759:88337-88356 | Msa1393850:exon | 45.0% |
| GTGGAGAAGATGGGAATGAG+AGG | + | tig0021759:83725-83744 | None:intergenic | 50.0% | |
| GGGAAATGTGAGTGGTTGGT+GGG | + | tig0021759:83807-83826 | None:intergenic | 50.0% | |
| AGGGAAATGTGAGTGGTTGG+TGG | + | tig0021759:83808-83827 | None:intergenic | 50.0% | |
| GTGAGGGAAATGTGAGTGGT+TGG | + | tig0021759:83811-83830 | None:intergenic | 50.0% | |
| GAGTGTGAGGGAAATGTGAG+TGG | + | tig0021759:83815-83834 | None:intergenic | 50.0% | |
| ! | GAAGAGTGCAGAAGCGTGAA+TGG | + | tig0021759:83860-83879 | None:intergenic | 50.0% |
| ACTCTCCAAAACCCTCACTC+TGG | - | tig0021759:83880-83899 | Msa1393850:three_prime_UTR | 50.0% | |
| ! | AAGGACCAGAGTGAGGGTTT+TGG | + | tig0021759:83888-83907 | None:intergenic | 50.0% |
| GGAAGAAAGGACCAGAGTGA+GGG | + | tig0021759:83894-83913 | None:intergenic | 50.0% | |
| AGGAAGAAAGGACCAGAGTG+AGG | + | tig0021759:83895-83914 | None:intergenic | 50.0% | |
| !! | GAACGAGTGTCGAGGAAGAA+AGG | + | tig0021759:83907-83926 | None:intergenic | 50.0% |
| ! | TTTCAAGGGAACGAGTGTCG+AGG | + | tig0021759:83915-83934 | None:intergenic | 50.0% |
| GGATTGAGAAGGGTCAGTGA+TGG | + | tig0021759:83944-83963 | None:intergenic | 50.0% | |
| !! | GGGATTGGAGTGGATTGAGA+AGG | + | tig0021759:83955-83974 | None:intergenic | 50.0% |
| GAGGGAAAAAGGGATTGGAG+TGG | + | tig0021759:83965-83984 | None:intergenic | 50.0% | |
| GGAGAGAGGGAAAAAGGGAT+TGG | + | tig0021759:83970-83989 | None:intergenic | 50.0% | |
| TCCAACCATCGACCCAATCA+AGG | - | tig0021759:83987-84006 | Msa1393850:CDS | 50.0% | |
| CCAACCATCGACCCAATCAA+GGG | - | tig0021759:83988-84007 | Msa1393850:CDS | 50.0% | |
| AGAACCCTTGATTGGGTCGA+TGG | + | tig0021759:83995-84014 | None:intergenic | 50.0% | |
| ! | CCGTTCTGTTTTCCCTTGTC+AGG | - | tig0021759:84164-84183 | Msa1393850:CDS | 50.0% |
| TCAGGACACACCAGCCATTA+GGG | - | tig0021759:84182-84201 | Msa1393850:CDS | 50.0% | |
| TGTGATGGCTGCAAAACACG+TGG | - | tig0021759:84248-84267 | Msa1393850:intron | 50.0% | |
| TTCGTCCAAAGGTAGAGTGG+TGG | - | tig0021759:84314-84333 | Msa1393850:intron | 50.0% | |
| CTCTTCCACCACTCTACCTT+TGG | + | tig0021759:84322-84341 | None:intergenic | 50.0% | |
| ! | TGGTGAGCTTGATAACAGGG+AGG | - | tig0021759:84389-84408 | Msa1393850:intron | 50.0% |
| ! | TGAGCTTGATAACAGGGAGG+TGG | - | tig0021759:84392-84411 | Msa1393850:intron | 50.0% |
| ! | GAGCTTGATAACAGGGAGGT+GGG | - | tig0021759:84393-84412 | Msa1393850:intron | 50.0% |
| ! | AGCTTGATAACAGGGAGGTG+GGG | - | tig0021759:84394-84413 | Msa1393850:intron | 50.0% |
| GCAGCTGAATCCAACAGTTG+AGG | + | tig0021759:84450-84469 | None:intergenic | 50.0% | |
| GGGGTCAAAAACACCATCCT+TGG | + | tig0021759:84597-84616 | None:intergenic | 50.0% | |
| !! | GATGGTGTTTTTGACCCCGA+CGG | - | tig0021759:84599-84618 | Msa1393850:intron | 50.0% |
| GACCCCGACGGTTATTAAAG+GGG | - | tig0021759:84611-84630 | Msa1393850:intron | 50.0% | |
| ! | GAACTTGCTCATAGCTGGAC+TGG | - | tig0021759:84663-84682 | Msa1393850:intron | 50.0% |
| TCACTACTTATGCAGAGCGG+AGG | - | tig0021759:85548-85567 | Msa1393850:intron | 50.0% | |
| TTATGCAGAGCGGAGGATTG+TGG | - | tig0021759:85555-85574 | Msa1393850:intron | 50.0% | |
| AGGATTGTGGAGGCTGTACA+AGG | - | tig0021759:85568-85587 | Msa1393850:intron | 50.0% | |
| CATCAGGGTCAATTCCTTCC+TGG | + | tig0021759:85696-85715 | None:intergenic | 50.0% | |
| CTTGTTGCGCATTGAACGTG+AGG | - | tig0021759:85756-85775 | Msa1393850:CDS | 50.0% | |
| GACCTTGTACTGTGGACAGA+AGG | - | tig0021759:86154-86173 | Msa1393850:intron | 50.0% | |
| ! | GTACTGTGGACAGAAGGTAC+TGG | - | tig0021759:86160-86179 | Msa1393850:intron | 50.0% |
| !! | CGGGCTCAAAAGCATCAGAT+GGG | + | tig0021759:86189-86208 | None:intergenic | 50.0% |
| !! | TCGGGCTCAAAAGCATCAGA+TGG | + | tig0021759:86190-86209 | None:intergenic | 50.0% |
| GGTAAATGGGAGGATGCCAA+GGG | - | tig0021759:86252-86271 | Msa1393850:intron | 50.0% | |
| GGGAGGATGAAATTGCTGAG+TGG | - | tig0021759:86272-86291 | Msa1393850:intron | 50.0% | |
| AATTGCTGAGTGGCAAGGTC+AGG | - | tig0021759:86282-86301 | Msa1393850:intron | 50.0% | |
| CAACATCCTACCTAGGATCG+GGG | - | tig0021759:86421-86440 | Msa1393850:CDS | 50.0% | |
| ! | CTCATAACGAGTTGGACCGT+AGG | + | tig0021759:86518-86537 | None:intergenic | 50.0% |
| CTACGGTCCAACTCGTTATG+AGG | - | tig0021759:86516-86535 | Msa1393850:CDS | 50.0% | |
| ATAGCAGCCATGGCAGATTG+TGG | - | tig0021759:86828-86847 | Msa1393850:intron | 50.0% | |
| AGCCATGGCAGATTGTGGTT+TGG | - | tig0021759:86833-86852 | Msa1393850:intron | 50.0% | |
| !!! | CGATTTTGGATAGTGGGCCA+TGG | + | tig0021759:86952-86971 | None:intergenic | 50.0% |
| CGATAAGACTGTTCCCGTCT+AGG | - | tig0021759:86970-86989 | Msa1393850:intron | 50.0% | |
| !! | CTCCAACGGGCTATTTCATG+CGG | - | tig0021759:87939-87958 | Msa1393850:CDS | 50.0% |
| ATCCGCATGAAATAGCCCGT+TGG | + | tig0021759:87944-87963 | None:intergenic | 50.0% | |
| CCAGTGCAGTGTAAAGTGGA+CGG | + | tig0021759:88028-88047 | None:intergenic | 50.0% | |
| ! | ACTGCACTGGTGAAAGACAG+TGG | - | tig0021759:88038-88057 | Msa1393850:CDS | 50.0% |
| TGAATCGGTTGGGATGTCAC+GGG | + | tig0021759:88336-88355 | None:intergenic | 50.0% | |
| ! | GAGAAGGGTCAGTGATGGAG+TGG | + | tig0021759:83939-83958 | None:intergenic | 55.0% |
| TGGGTCGATGGTTGGAGAGA+GGG | + | tig0021759:83983-84002 | None:intergenic | 55.0% | |
| TTGGGTCGATGGTTGGAGAG+AGG | + | tig0021759:83984-84003 | None:intergenic | 55.0% | |
| CCCTTGATTGGGTCGATGGT+TGG | + | tig0021759:83991-84010 | None:intergenic | 55.0% | |
| AAGAGCAGAGGAAGAAGGGG+AGG | + | tig0021759:84070-84089 | None:intergenic | 55.0% | |
| TGGCTGGTGTGTCCTGACAA+GGG | + | tig0021759:84179-84198 | None:intergenic | 55.0% | |
| ATGGCTGGTGTGTCCTGACA+AGG | + | tig0021759:84180-84199 | None:intergenic | 55.0% | |
| GTCAGGACACACCAGCCATT+AGG | - | tig0021759:84181-84200 | Msa1393850:CDS | 55.0% | |
| TGAAGCTGCGCCTCAACTGT+TGG | - | tig0021759:84437-84456 | Msa1393850:intron | 55.0% | |
| ATGAGCCACAACCTGTGCAC+CGG | + | tig0021759:84643-84662 | None:intergenic | 55.0% | |
| CGGTAAATGGGAGGATGCCA+AGG | - | tig0021759:86251-86270 | Msa1393850:intron | 55.0% | |
| AAATGGGAGGATGCCAAGGG+AGG | - | tig0021759:86255-86274 | Msa1393850:intron | 55.0% | |
| TGAGTGGCAAGGTCAGGAGT+GGG | - | tig0021759:86288-86307 | Msa1393850:intron | 55.0% | |
| TCAGGAGTGGGAGCTCTACT+TGG | - | tig0021759:86300-86319 | Msa1393850:intron | 55.0% | |
| ATCCTACCTAGGATCGGGGA+GGG | - | tig0021759:86425-86444 | Msa1393850:CDS | 55.0% | |
| ! | AAAGCTCGGTGGAAGGTTGG+CGG | - | tig0021759:87820-87839 | Msa1393850:CDS | 55.0% |
| CCGTCCACTTTACACTGCAC+TGG | - | tig0021759:88025-88044 | Msa1393850:CDS | 55.0% | |
| AGCAGAGGAAGAAGGGGAGG+TGG | + | tig0021759:84067-84086 | None:intergenic | 60.0% | |
| TGCAACCGGTGCACAGGTTG+TGG | - | tig0021759:84635-84654 | Msa1393850:intron | 60.0% | |
| TGCAGAGCGGAGGATTGTGG+AGG | - | tig0021759:85558-85577 | Msa1393850:intron | 60.0% | |
| CTGAGTGGCAAGGTCAGGAG+TGG | - | tig0021759:86287-86306 | Msa1393850:intron | 60.0% | |
| CATCCTACCTAGGATCGGGG+AGG | - | tig0021759:86424-86443 | Msa1393850:CDS | 60.0% | |
| TCCTACCTAGGATCGGGGAG+GGG | - | tig0021759:86426-86445 | Msa1393850:CDS | 60.0% | |
| ATCGGTTGGGATGTCACGGG+AGG | + | tig0021759:88333-88352 | None:intergenic | 60.0% | |
| CGTGGTGCGTCGCGAATCGT+TGG | - | tig0021759:84266-84285 | Msa1393850:intron | 65.0% | |
| ATAACAGGGAGGTGGGGCCC+AGG | - | tig0021759:84400-84419 | Msa1393850:intron | 65.0% | |
| AGGGGATGCAACCGGTGCAC+AGG | - | tig0021759:84629-84648 | Msa1393850:intron | 65.0% | |
| CCTACCTAGGATCGGGGAGG+GGG | - | tig0021759:86427-86446 | Msa1393850:CDS | 65.0% | |
| GGAGGTGGGGCCCAGGACTA+GGG | - | tig0021759:84407-84426 | Msa1393850:intron | 70.0% | |
| CCCCCTCCCCGATCCTAGGT+AGG | + | tig0021759:86430-86449 | None:intergenic | 70.0% | |
| GCAACCCCCTCCCCGATCCT+AGG | + | tig0021759:86434-86453 | None:intergenic | 70.0% | |
| GGGAGGTGGGGCCCAGGACT+AGG | - | tig0021759:84406-84425 | Msa1393850:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021759 | gene | 83657 | 88444 | 83657 | ID=Msa1393850;Name=Msa1393850 |
| tig0021759 | mRNA | 83657 | 88444 | 83657 | ID=Msa1393850-mRNA-1;Parent=Msa1393850;Name=Msa1393850-mRNA-1;_AED=0.20;_eAED=0.20;_QI=106|1|1|1|1|1|4|275|608 |
| tig0021759 | exon | 83657 | 84228 | 83657 | ID=Msa1393850-mRNA-1:exon:14082;Parent=Msa1393850-mRNA-1 |
| tig0021759 | exon | 85747 | 86073 | 85747 | ID=Msa1393850-mRNA-1:exon:14081;Parent=Msa1393850-mRNA-1 |
| tig0021759 | exon | 86324 | 86557 | 86324 | ID=Msa1393850-mRNA-1:exon:14080;Parent=Msa1393850-mRNA-1 |
| tig0021759 | exon | 87370 | 88444 | 87370 | ID=Msa1393850-mRNA-1:exon:14079;Parent=Msa1393850-mRNA-1 |
| tig0021759 | five_prime_UTR | 88339 | 88444 | 88339 | ID=Msa1393850-mRNA-1:five_prime_utr;Parent=Msa1393850-mRNA-1 |
| tig0021759 | CDS | 87370 | 88338 | 87370 | ID=Msa1393850-mRNA-1:cds;Parent=Msa1393850-mRNA-1 |
| tig0021759 | CDS | 86324 | 86557 | 86324 | ID=Msa1393850-mRNA-1:cds;Parent=Msa1393850-mRNA-1 |
| tig0021759 | CDS | 85747 | 86073 | 85747 | ID=Msa1393850-mRNA-1:cds;Parent=Msa1393850-mRNA-1 |
| tig0021759 | CDS | 83932 | 84228 | 83932 | ID=Msa1393850-mRNA-1:cds;Parent=Msa1393850-mRNA-1 |
| tig0021759 | three_prime_UTR | 83657 | 83931 | 83657 | ID=Msa1393850-mRNA-1:three_prime_utr;Parent=Msa1393850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
