AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1029530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1029530 MtrunA17_Chr7g0249941 92.736 1005 56 3 17 1013 17 1012 0.0 1568
Msa1029530 MtrunA17_Chr8g0347491 56.751 985 297 24 124 1000 96 1059 0.0 882
Msa1029530 MtrunA17_Chr4g0045881 58.700 477 180 6 547 1008 414 888 8.20e-177 538
Msa1029530 MtrunA17_Chr5g0401291 60.138 434 161 6 564 990 460 888 3.37e-163 503
Msa1029530 MtrunA17_Chr4g0054001 58.079 458 175 7 564 1013 409 857 3.00e-161 496
Msa1029530 MtrunA17_Chr1g0192111 52.826 407 173 9 569 966 497 893 3.34e-122 395
Msa1029530 MtrunA17_Chr4g0042081 47.700 413 199 7 564 966 531 936 9.23e-112 369
Msa1029530 MtrunA17_Chr2g0319201 48.441 417 195 7 564 966 390 800 4.94e-111 364
Msa1029530 MtrunA17_Chr4g0023611 48.349 424 186 9 561 966 394 802 6.49e-110 361
Msa1029530 MtrunA17_Chr2g0323071 46.099 423 205 8 567 975 316 729 3.42e-104 343
Msa1029530 MtrunA17_Chr5g0414941 39.171 434 225 9 565 967 410 835 9.05e-87 298
Msa1029530 MtrunA17_Chr8g0364331 39.035 456 243 11 541 968 279 727 1.70e-86 294
Msa1029530 MtrunA17_Chr3g0118231 34.334 533 313 16 499 1010 179 695 8.68e-73 255
Msa1029530 MtrunA17_Chr4g0061111 26.943 386 231 14 570 915 1171 1545 1.32e-29 127
Msa1029530 MtrunA17_Chr4g0074091 24.933 373 242 8 569 934 792 1133 2.32e-28 123
Msa1029530 MtrunA17_Chr3g0091511 25.974 385 236 13 570 915 1584 1958 7.08e-27 119
Msa1029530 MtrunA17_Chr1g0150261 24.242 429 256 13 498 913 1313 1685 2.60e-26 117
Msa1029530 MtrunA17_Chr5g0409151 24.057 212 129 3 704 913 5 186 4.35e-14 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1029530 AT3G25500.1 70.101 495 127 6 520 1000 538 1025 0.0 691
Msa1029530 AT3G25500.1 40.865 208 98 7 96 284 63 264 1.40e-16 85.9
Msa1029530 AT2G43800.1 54.118 510 182 9 497 989 400 874 1.31e-161 499
Msa1029530 AT5G67470.1 59.535 430 157 5 566 990 458 875 1.39e-158 491
Msa1029530 AT3G05470.1 50.365 411 187 7 568 969 469 871 6.62e-119 386
Msa1029530 AT5G54650.2 49.282 418 191 6 563 966 436 846 4.62e-116 379
Msa1029530 AT5G54650.1 49.282 418 191 6 563 966 436 846 4.62e-116 379
Msa1029530 AT5G48360.1 49.612 387 157 9 584 967 430 781 4.17e-107 352
Msa1029530 AT3G07540.1 43.478 414 183 5 558 966 467 834 2.03e-88 302
Msa1029530 AT1G70140.1 38.767 454 232 9 563 983 299 739 1.95e-82 284
Msa1029530 AT1G59910.1 37.674 430 238 10 555 966 448 865 5.52e-82 286
Msa1029530 AT3G25493.1 71.795 117 33 0 884 1000 31 147 1.65e-53 184
Msa1029530 AT1G24150.2 42.180 211 117 4 569 777 312 519 7.23e-42 162
Msa1029530 AT5G07740.3 27.034 381 227 10 567 934 1222 1564 4.62e-32 136
Msa1029530 AT5G07740.1 27.034 381 227 10 567 934 1244 1586 4.94e-32 136
Msa1029530 AT5G07740.2 25.659 417 221 12 567 934 1244 1620 3.68e-28 123
Msa1029530 AT5G58160.1 24.324 407 264 10 569 967 838 1208 1.04e-27 122
Msa1029530 AT1G31810.2 24.737 380 237 10 567 934 816 1158 6.08e-27 119
Msa1029530 AT1G31810.1 24.737 380 237 10 567 934 816 1158 6.08e-27 119
Msa1029530 AT5G07770.3 23.138 376 243 7 565 934 194 529 1.29e-26 117
Msa1029530 AT5G07770.1 23.138 376 243 7 565 934 187 522 1.35e-26 117
Msa1029530 AT5G07770.4 23.138 376 243 7 565 934 53 388 8.14e-26 114
Msa1029530 AT4G15200.2 44.444 135 64 4 567 696 328 456 1.07e-23 106
Msa1029530 AT4G15200.4 44.444 135 64 4 567 696 327 455 1.11e-23 106
Msa1029530 AT5G07770.2 22.316 354 230 6 587 934 181 495 1.55e-22 104
Msa1029530 AT3G32400.2 22.926 458 295 14 540 980 69 485 3.86e-22 102
Msa1029530 AT5G07760.1 23.588 301 201 4 634 934 523 794 2.45e-21 100
Msa1029530 AT5G07760.2 24.286 280 183 4 634 913 523 773 2.74e-21 100
Msa1029530 AT2G25050.1 21.225 457 283 13 564 980 739 1158 4.10e-20 97.4
Msa1029530 AT5G07650.2 23.656 279 184 4 635 913 470 719 5.96e-19 93.2
Msa1029530 AT5G07780.1 22.616 367 230 9 566 918 74 400 3.02e-17 86.3
Msa1029530 AT3G32400.1 22.414 464 291 16 540 980 61 478 3.21e-16 83.2
Msa1029530 AT4G15200.3 42.718 103 50 3 567 664 328 426 6.18e-16 82.0
Msa1029530 AT5G07650.1 22.442 303 182 5 635 913 470 743 7.18e-16 83.2

Find 261 sgRNAs with CRISPR-Local

Find 356 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCCTCCTCTTTCGGTTTC+AGG 0.092570 7_1:-62987094 None:intergenic
TTCTGTTTATGTAGAGTAAA+AGG 0.145426 7_1:+62989408 Msa1029530:three_prime_UTR
ATATACCTTTCGCGTTTAAA+AGG 0.176043 7_1:+62988390 Msa1029530:CDS
TCGTCATCAAAATCTCTTTC+TGG 0.188306 7_1:-62986803 None:intergenic
TCTTGTTCTTCTTCTTCTTT+TGG 0.190480 7_1:+62986626 Msa1029530:CDS
TGTAAAGAAAGCTGCTACTA+TGG 0.208997 7_1:+62988915 Msa1029530:CDS
GAAACATTAGATAGCCTTAA+TGG 0.246253 7_1:-62986917 None:intergenic
ATCATTAGAAGAGAGATTTA+TGG 0.254085 7_1:+62986862 Msa1029530:CDS
TCATCCATTCAGAATCTTCT+TGG 0.257716 7_1:+62989185 Msa1029530:CDS
GTGGGAATAGTGGTGGAAAA+TGG 0.261852 7_1:-62985876 None:intergenic
TCAGAAACACTTGACATTCT+TGG 0.271864 7_1:-62987013 None:intergenic
CAATGCAGCGGCTTCAATTT+CGG 0.276329 7_1:-62987394 None:intergenic
CTAGAAGCTGTACTTAAAAC+TGG 0.281454 7_1:+62988637 Msa1029530:CDS
ATGCTTCCACAACCACTTCC+TGG 0.312949 7_1:+62989318 Msa1029530:CDS
TAAGAAGATGGTAAACAAAA+AGG 0.315615 7_1:-62985688 None:intergenic
TCGTGACTTGGTGAGGCTTC+TGG 0.318990 7_1:-62986725 None:intergenic
CTTTATCAGAACAACCATTA+AGG 0.320654 7_1:+62986903 Msa1029530:CDS
TGCTAAGTTTGTAGTTCCTT+TGG 0.322562 7_1:-62988974 None:intergenic
GGTGATGAAAGAGGGTAGTT+TGG 0.322808 7_1:-62985996 None:intergenic
TTGTTTACCATCTTCTTAGA+AGG 0.333939 7_1:+62985693 Msa1029530:CDS
GAAAAGCTCAACGCTGCTTT+CGG 0.334208 7_1:-62986246 None:intergenic
CGGCGGCGGTGATGGAGGTT+CGG 0.351066 7_1:-62986447 None:intergenic
GCTCTTAATGTCACAATAGA+AGG 0.351924 7_1:+62987997 Msa1029530:CDS
AGCATTGGATTAACCGGAAC+AGG 0.353608 7_1:-62989300 None:intergenic
TTGTTAGAAGAGTGAGAAGT+TGG 0.355610 7_1:-62986098 None:intergenic
TGGTAATGGAAGTAGATTAT+TGG 0.356555 7_1:-62985574 None:intergenic
GCAGTAGCGGAGAGTGCTAT+AGG 0.356557 7_1:-62986128 None:intergenic
CTCTGTCGCTGCTGCGGCAG+AGG 0.358697 7_1:-62987220 None:intergenic
GCAGCTAAACCCTCCTCTTT+CGG 0.371890 7_1:-62987101 None:intergenic
AGTGGTGGAAAATGGGTGTT+TGG 0.377870 7_1:-62985868 None:intergenic
TCCTCCTCGCGGCGGTGGTT+CGG 0.377936 7_1:+62986367 Msa1029530:CDS
GAGGAAGCATTGGGAGATTC+CGG 0.379113 7_1:+62987156 Msa1029530:CDS
AACTACAAGCTCTACTTTGA+TGG 0.379293 7_1:+62988828 Msa1029530:CDS
GAATGAAGTGGTGGTGGTTG+TGG 0.384603 7_1:-62985825 None:intergenic
TTTGGTTTGGGTCTTGAGTA+GGG 0.384677 7_1:-62985908 None:intergenic
ACTGGGAACCGCATGAATAT+CGG 0.388113 7_1:+62988655 Msa1029530:CDS
GCAAGTAGTGAAGGTGGTGG+TGG 0.395385 7_1:-62986020 None:intergenic
GGCGGCGGTGATGGAGGTTC+GGG 0.398867 7_1:-62986446 None:intergenic
CGCTGCTGCGGCAGAGGAGG+AGG 0.400646 7_1:-62987214 None:intergenic
GGATCTTAGAGTCTTGTTGC+CGG 0.400714 7_1:-62986225 None:intergenic
GTGATGAAAGAGGGTAGTTT+GGG 0.401848 7_1:-62985995 None:intergenic
CGGTTTCAGGTGATGAAAGT+AGG 0.402500 7_1:-62987081 None:intergenic
TTACGTTCTTCTTCCTTGCT+CGG 0.403108 7_1:-62988296 None:intergenic
AGAGGAGGAGGCGGCGGTGG+CGG 0.403652 7_1:-62987202 None:intergenic
AGCTAATAAATTCCCTGTTC+CGG 0.408596 7_1:+62989287 Msa1029530:CDS
CGGTGGAAGTACGACGGTTA+TGG 0.410640 7_1:-62986205 None:intergenic
CGAAATTGAAGCCGCTGCAT+TGG 0.411426 7_1:+62987395 Msa1029530:CDS
TCAGATTAGAAACAACTTGT+AGG 0.412466 7_1:-62988876 None:intergenic
GGTGGTTGTGGAGGTGATTG+TGG 0.414782 7_1:-62985813 None:intergenic
AATGAACAACTTTATTAGAA+TGG 0.415810 7_1:+62989059 Msa1029530:CDS
TCGCCGAGAGGCTCTTCTCT+TGG 0.420622 7_1:+62986512 Msa1029530:CDS
CTCTGCCCTCCTGACTTGGC+AGG 0.422636 7_1:-62987930 None:intergenic
TAATGATGCATGTGCATTTG+TGG 0.422704 7_1:-62986846 None:intergenic
GGTGATTGTGGTGGTTCAGA+TGG 0.426482 7_1:-62985801 None:intergenic
TCGCCACGCGGCGGCGGTGA+TGG 0.427546 7_1:-62986455 None:intergenic
GCAATCTGCTTGGATATAAC+CGG 0.429038 7_1:-62987175 None:intergenic
ACTCCTCCTCCTCGCGGCGG+TGG 0.429843 7_1:+62986362 Msa1029530:CDS
TCTGTTTATGTAGAGTAAAA+GGG 0.430049 7_1:+62989409 Msa1029530:three_prime_UTR
CAAGTAGTGAAGGTGGTGGT+GGG 0.430910 7_1:-62986019 None:intergenic
GTGGTGGAAAATGGGTGTTT+GGG 0.430966 7_1:-62985867 None:intergenic
TGTGGAAGCATTGGATTAAC+CGG 0.432462 7_1:-62989306 None:intergenic
CAGCTTTCTTTACATTTGAT+AGG 0.433341 7_1:-62988906 None:intergenic
TGGGAATAGTGGTGGAAAAT+GGG 0.434055 7_1:-62985875 None:intergenic
TTGTTGTGTTCTCCGGGGAT+TGG 0.439244 7_1:-62986696 None:intergenic
CAGTAGCGGAGAGTGCTATA+GGG 0.439291 7_1:-62986127 None:intergenic
GTGGTACGGAATCATCTTCC+CGG 0.440003 7_1:+62986552 Msa1029530:CDS
AGAAGAGTGAGAAGTTGGTT+GGG 0.440050 7_1:-62986093 None:intergenic
CACCATTTCCCTCTCAGAGC+TGG 0.440589 7_1:-62987431 None:intergenic
TAGCTGCAATTCAAACCAAT+GGG 0.441840 7_1:+62987117 Msa1029530:CDS
GAAGAGTGAGAAGTTGGTTG+GGG 0.444019 7_1:-62986092 None:intergenic
GGCAGAGGAGGAGGCGGCGG+TGG 0.446921 7_1:-62987205 None:intergenic
GGTTCTTCCCCTGCCAAGTC+AGG 0.450610 7_1:+62987921 Msa1029530:CDS
TCCGACATCGACGACGGGTT+CGG 0.451094 7_1:-62986279 None:intergenic
GAAATTGAAGCCGCTGCATT+GGG 0.452502 7_1:+62987396 Msa1029530:CDS
AACGGCGGAGAATGCACGCC+GGG 0.453264 7_1:-62986570 None:intergenic
TTCTTCACAGAGGAAGCATT+GGG 0.453977 7_1:+62987147 Msa1029530:CDS
TGAGTAGGGTTGTTATCTGT+GGG 0.455616 7_1:-62985894 None:intergenic
TATACCTTTCGCGTTTAAAA+GGG 0.459629 7_1:+62988391 Msa1029530:CDS
ATCAACCTCGGTCAAATTTG+AGG 0.460049 7_1:+62987281 Msa1029530:CDS
ACTGAAGGCATTCGTCTCTC+TGG 0.460833 7_1:+62988796 Msa1029530:CDS
TAGAAGAGTGAGAAGTTGGT+TGG 0.461046 7_1:-62986094 None:intergenic
GAAAATGGGAGAAGTGGTAA+TGG 0.461805 7_1:-62985588 None:intergenic
TGCTGCGGCAGAGGAGGAGG+CGG 0.466433 7_1:-62987211 None:intergenic
GGTGGAAGAGGCCGGAGCTC+CGG 0.468597 7_1:-62986410 None:intergenic
AGTAGTGAAGGTGGTGGTGG+GGG 0.471373 7_1:-62986017 None:intergenic
AGGGTTTGGTGAAGTGAAAG+AGG 0.471823 7_1:-62985621 None:intergenic
TTGGGAAGTGTCTAGAAGTT+CGG 0.478983 7_1:+62987249 Msa1029530:CDS
TGCGGCAGAGGAGGAGGCGG+CGG 0.479700 7_1:-62987208 None:intergenic
GCGCTAACGGTGGAAGAGGC+CGG 0.481073 7_1:-62986418 None:intergenic
TCTTTACTTCCGTGTAATCC+AGG 0.482290 7_1:-62989336 None:intergenic
TGTCGCTGCTGCGGCAGAGG+AGG 0.483933 7_1:-62987217 None:intergenic
TTGAGTAGGGTTGTTATCTG+TGG 0.485522 7_1:-62985895 None:intergenic
AACTTGAATCGCCGGAGCTC+CGG 0.486584 7_1:+62986399 Msa1029530:CDS
TTTCTTCACAGAGGAAGCAT+TGG 0.492031 7_1:+62987146 Msa1029530:CDS
ACTTGATTCTGCAACACAAA+AGG 0.493421 7_1:-62987331 None:intergenic
AGTACTCTGCCCTCCTGACT+TGG 0.493526 7_1:-62987934 None:intergenic
ACGTAAATTGAAGGAACATA+AGG 0.494125 7_1:+62988313 Msa1029530:CDS
GAACCACCGCCGCGAGGAGG+AGG 0.495135 7_1:-62986365 None:intergenic
CCGAGAGGCTCTTCTCTTGG+TGG 0.496394 7_1:+62986515 Msa1029530:CDS
GGAAGTGGTTGTGGAAGCAT+TGG 0.496409 7_1:-62989315 None:intergenic
GGAAGAAGAACGTAAATTGA+AGG 0.496485 7_1:+62988304 Msa1029530:CDS
CGGAGTTAGCACCTCCTTCG+AGG 0.496606 7_1:+62987308 Msa1029530:CDS
ACAACCAAGAAGATTCTGAA+TGG 0.498830 7_1:-62989189 None:intergenic
TAGTTATCGCCACGCGGCGG+CGG 0.500939 7_1:-62986461 None:intergenic
AAGAGAGAAAATGGGAGAAG+TGG 0.501311 7_1:-62985594 None:intergenic
AACCAGCTCTGAGAGGGAAA+TGG 0.501834 7_1:+62987429 Msa1029530:CDS
ATTAGCGAGGAGATGTTAGC+AGG 0.504178 7_1:-62986056 None:intergenic
GATTGTGGTGGTTCAGATGG+AGG 0.506943 7_1:-62985798 None:intergenic
AGCCGCGCTAACGGTGGAAG+AGG 0.508476 7_1:-62986422 None:intergenic
CTTCCGTGTAATCCAGGAAG+TGG 0.510458 7_1:-62989330 None:intergenic
GGTCATGCAGTTAATCGAAA+AGG 0.510552 7_1:+62988999 Msa1029530:CDS
ATGAGATCCTTCTAAGAAGA+TGG 0.510856 7_1:-62985700 None:intergenic
TGTAATCCAGGAAGTGGTTG+TGG 0.511028 7_1:-62989324 None:intergenic
CTCTGCCGCAGCAGCGACAG+AGG 0.511956 7_1:+62987221 Msa1029530:CDS
GATGTTAAGTGTCGGAGGCT+TGG 0.512016 7_1:+62988853 Msa1029530:CDS
AGAGAGTTCAATGGCACAAA+GGG 0.512682 7_1:-62985774 None:intergenic
GTGAAGAAAATGTTCCCCAT+TGG 0.513587 7_1:-62987132 None:intergenic
TCTTCCCCTGCCAAGTCAGG+AGG 0.516399 7_1:+62987924 Msa1029530:CDS
TGGTGGAAAATGGGTGTTTG+GGG 0.524503 7_1:-62985866 None:intergenic
GGTTTCAGGTGATGAAAGTA+GGG 0.524850 7_1:-62987080 None:intergenic
GGTGCCGAGGTAGAGAAAAT+CGG 0.524971 7_1:-62986312 None:intergenic
TTTCTCAGCAACATCAAGCT+TGG 0.525855 7_1:-62988348 None:intergenic
GTTGTTATCTGTGGGAATAG+TGG 0.526578 7_1:-62985886 None:intergenic
TCCACGTGTTGGTCGTGACT+TGG 0.528811 7_1:-62986737 None:intergenic
TCTGCCCTCCTGACTTGGCA+GGG 0.529210 7_1:-62987929 None:intergenic
CACGGATGCTGCTCCACGAT+CGG 0.530739 7_1:+62987900 Msa1029530:CDS
GACGGTTATGGAGGCGTCGT+CGG 0.532960 7_1:-62986193 None:intergenic
CAGGAAATTATTAGAACTGA+AGG 0.533560 7_1:+62988781 Msa1029530:CDS
GACAGGGTCTGCAAAGAAGT+TGG 0.533837 7_1:+62989234 Msa1029530:CDS
CAACTTTATTAGAATGGCTG+AGG 0.534477 7_1:+62989065 Msa1029530:CDS
CTTTATTAGAATGGCTGAGG+AGG 0.535108 7_1:+62989068 Msa1029530:CDS
CTCTGAGAGGGAAATGGTGT+GGG 0.536088 7_1:+62987435 Msa1029530:CDS
GGTTCGGGAAGCCGCGCTAA+CGG 0.536512 7_1:-62986431 None:intergenic
GCTGATGTCAAAGGAGCAGA+TGG 0.537807 7_1:+62988730 Msa1029530:CDS
CGCCGGCGAGTTCCAATCCC+CGG 0.538306 7_1:+62986684 Msa1029530:CDS
CTGCCCTCCTGACTTGGCAG+GGG 0.540534 7_1:-62987928 None:intergenic
ACGAGAAAGCTCCGGTGGTA+CGG 0.541677 7_1:+62986538 Msa1029530:CDS
CGATCGTGGAGCAGCATCCG+TGG 0.541719 7_1:-62987899 None:intergenic
GCAGCGACAGAGGAAACATT+GGG 0.543791 7_1:+62987231 Msa1029530:CDS
CTTGGTGGACGAGAAAGCTC+CGG 0.546839 7_1:+62986530 Msa1029530:CDS
CGGCGATTGTTTATCAACCT+CGG 0.547175 7_1:+62987269 Msa1029530:CDS
GAGGAGTTTCATCGATTCCA+CGG 0.548464 7_1:-62986346 None:intergenic
CTCAAGTTGGCTGATGTCAA+AGG 0.549222 7_1:+62988721 Msa1029530:CDS
TCAGGTGATGAAAGTAGGGC+TGG 0.549540 7_1:-62987076 None:intergenic
CCACGCGGCGGCGGTGATGG+AGG 0.549592 7_1:-62986452 None:intergenic
TTTCCTCCGACATCGACGAC+GGG 0.551052 7_1:-62986284 None:intergenic
AAATATTGCAATCTTGCTCA+AGG 0.552800 7_1:+62987975 Msa1029530:CDS
AAGTAGTGAAGGTGGTGGTG+GGG 0.553293 7_1:-62986018 None:intergenic
ACTATGAAGATGATGTATCA+AGG 0.553393 7_1:+62986977 Msa1029530:CDS
TTAGCTGCAATTCAAACCAA+TGG 0.553433 7_1:+62987116 Msa1029530:CDS
AGCAGCGACAGAGGAAACAT+TGG 0.553796 7_1:+62987230 Msa1029530:CDS
GCCGAACCCGTCGTCGATGT+CGG 0.553862 7_1:+62986278 Msa1029530:CDS
CAACCACTTCCTGGATTACA+CGG 0.555171 7_1:+62989327 Msa1029530:CDS
GGTTGTGGAGGTGATTGTGG+TGG 0.555373 7_1:-62985810 None:intergenic
ACTCGATACACTTCTCAAGT+TGG 0.557366 7_1:+62988708 Msa1029530:CDS
TGAACTTTAATTGAAAGCAA+AGG 0.557406 7_1:-62989500 None:intergenic
GGAGATGGCAACAGCGACGA+CGG 0.558520 7_1:-62986156 None:intergenic
GACATCACTGCTGAGAACTT+CGG 0.559866 7_1:-62988941 None:intergenic
AGTGAGAACCAGCTCTGAGA+GGG 0.560131 7_1:+62987423 Msa1029530:CDS
TCGGTCAAATTTGAGGCCGC+CGG 0.562247 7_1:+62987288 Msa1029530:CDS
ATTGTGGTGGTTCAGATGGA+GGG 0.563324 7_1:-62985797 None:intergenic
AGGAGTTTCATCGATTCCAC+GGG 0.565330 7_1:-62986345 None:intergenic
ATGAATATCGGAACAAATCG+CGG 0.566886 7_1:+62988667 Msa1029530:CDS
TTATCGTAAACTTGAATCGC+CGG 0.567814 7_1:+62986391 Msa1029530:CDS
AGAGGCACCGATGACATACC+AGG 0.568102 7_1:-62987049 None:intergenic
GGTTGGTTGCAGATTGAATG+AGG 0.569304 7_1:+62987831 Msa1029530:intron
TGGCGGAGAAGCAATCTGCT+TGG 0.569923 7_1:-62987185 None:intergenic
AACAAATCGCGGTGATGCGG+AGG 0.573648 7_1:+62988678 Msa1029530:CDS
TCAGCAACATCAAGCTTGGT+CGG 0.574627 7_1:-62988344 None:intergenic
GGTCGAAGCAATGCTTTACA+TGG 0.576745 7_1:+62988412 Msa1029530:CDS
GGAAGATGATTCCGTACCAC+CGG 0.578216 7_1:-62986549 None:intergenic
AAAATCATTTCAAACTCTAG+AGG 0.578838 7_1:+62988466 Msa1029530:CDS
TGCAACACAAAAGGCCTCGA+AGG 0.581456 7_1:-62987322 None:intergenic
TCATCACCTGAAACCGAAAG+AGG 0.582447 7_1:+62987088 Msa1029530:CDS
GGTCTGCAAAGAAGTTGGTA+TGG 0.582892 7_1:+62989239 Msa1029530:CDS
TCTTAGAGTCTTGTTGCCGG+TGG 0.583001 7_1:-62986222 None:intergenic
TTTGCAGACCCTGTCAAGAA+CGG 0.583252 7_1:-62989226 None:intergenic
GGTGGAGAATGAAGTGGTGG+TGG 0.584162 7_1:-62985831 None:intergenic
ACCGAACCACCGCCGCGAGG+AGG 0.585859 7_1:-62986368 None:intergenic
CGGAACAAATCGCGGTGATG+CGG 0.587718 7_1:+62988675 Msa1029530:CDS
GAAAGTAGGGCTGGTGACAG+AGG 0.591874 7_1:-62987067 None:intergenic
AAGAGTGAGAAGTTGGTTGG+GGG 0.592124 7_1:-62986091 None:intergenic
GCTCTGAGAGGGAAATGGTG+TGG 0.593039 7_1:+62987434 Msa1029530:CDS
CATAACCGTCGTACTTCCAC+CGG 0.595014 7_1:+62986206 Msa1029530:CDS
GACGACGGCGACTGCAGTAG+CGG 0.595815 7_1:-62986141 None:intergenic
CTTCCCCTGCCAAGTCAGGA+GGG 0.596399 7_1:+62987925 Msa1029530:CDS
AGAGTGAGAAGTTGGTTGGG+GGG 0.599147 7_1:-62986090 None:intergenic
TGAAGTGGTGGTGGTTGTGG+AGG 0.602443 7_1:-62985822 None:intergenic
AAAGCTACCTGGTATGTCAT+CGG 0.604147 7_1:+62987042 Msa1029530:CDS
GGCAGGGGAAGAACCGATCG+TGG 0.604257 7_1:-62987913 None:intergenic
GATCGTGGAGCAGCATCCGT+GGG 0.605404 7_1:-62987898 None:intergenic
TCTGACGGTTCAAAGCTACC+TGG 0.607475 7_1:+62987031 Msa1029530:CDS
GTTTCCTCCGACATCGACGA+CGG 0.608119 7_1:-62986285 None:intergenic
GATGGAGGGAGAGAGTTCAA+TGG 0.609634 7_1:-62985783 None:intergenic
GAAGCAAAAGCAAGTAGTGA+AGG 0.609761 7_1:-62986029 None:intergenic
TGTTTCCTCTGTCGCTGCTG+CGG 0.610509 7_1:-62987226 None:intergenic
CTCGAAGGAGGTGCTAACTC+CGG 0.611270 7_1:-62987307 None:intergenic
CCTCCATCACCGCCGCCGCG+TGG 0.612499 7_1:+62986452 Msa1029530:CDS
CACCTGAAACCGAAAGAGGA+GGG 0.614245 7_1:+62987092 Msa1029530:CDS
TTCGATGAGTCTCTCACCGC+CGG 0.614410 7_1:+62986667 Msa1029530:CDS
ATTCTGTAATCTCCTTCACA+AGG 0.615167 7_1:-62989131 None:intergenic
CAACGGCGGAGAATGCACGC+CGG 0.615294 7_1:-62986571 None:intergenic
GATGTCTTGAAACTTTCCAA+AGG 0.615543 7_1:+62988958 Msa1029530:CDS
CTCACTTTATCCCAATGCAG+CGG 0.615606 7_1:-62987406 None:intergenic
GAAGTAAAGAAAGACGGAGA+TGG 0.616132 7_1:-62986171 None:intergenic
TACAACAAAATGTAGTAGAG+TGG 0.617486 7_1:-62988758 None:intergenic
ATGGCACAAAGGGTTCATGA+AGG 0.619990 7_1:-62985764 None:intergenic
GAAGGTGGAGAATGAAGTGG+TGG 0.620070 7_1:-62985834 None:intergenic
GAGAGAGTTCAATGGCACAA+AGG 0.620151 7_1:-62985775 None:intergenic
TAGAAGCTGTACTTAAAACT+GGG 0.620655 7_1:+62988638 Msa1029530:CDS
GTTGCTTCTGTTAACGACAA+CGG 0.620858 7_1:-62986588 None:intergenic
TGATGGAAGATGTTAAGTGT+CGG 0.622947 7_1:+62988845 Msa1029530:CDS
ATGCAGTTAATCGAAAAGGT+AGG 0.623742 7_1:+62989003 Msa1029530:CDS
CCACCAAGAGAAGAGCCTCT+CGG 0.628865 7_1:-62986515 None:intergenic
TGTTGCTTTGACCCTTGTGA+AGG 0.629396 7_1:+62989119 Msa1029530:CDS
AACACAAAAGGCCTCGAAGG+AGG 0.629708 7_1:-62987319 None:intergenic
AAGAACGATATTCCACGTGT+TGG 0.632729 7_1:-62986748 None:intergenic
TCAAGTGACAAATGAGTGTG+TGG 0.633319 7_1:+62987348 Msa1029530:CDS
TCACCTGAAACCGAAAGAGG+AGG 0.633487 7_1:+62987091 Msa1029530:CDS
AAACTCTTCATCTTCCTCGT+CGG 0.633851 7_1:-62986486 None:intergenic
TAGGATCTGATGAAAGCAGT+CGG 0.635638 7_1:+62989022 Msa1029530:CDS
TGGAAGTACGACGGTTATGG+AGG 0.636481 7_1:-62986202 None:intergenic
GGCCTCTTCCACCGTTAGCG+CGG 0.636580 7_1:+62986420 Msa1029530:CDS
CTCATCGAATGAGACTGCTC+CGG 0.636849 7_1:-62986653 None:intergenic
GGTGTGAGGAAGAATTAGCG+AGG 0.637433 7_1:-62986069 None:intergenic
ACCAAGTCACGACCAACACG+TGG 0.641108 7_1:+62986736 Msa1029530:CDS
AGAATGTCAAGTGTTTCTGA+CGG 0.641746 7_1:+62987016 Msa1029530:CDS
CAAGTGACAAATGAGTGTGT+GGG 0.644325 7_1:+62987349 Msa1029530:CDS
GATTCCACGGGAGTCTACAA+CGG 0.646158 7_1:-62986333 None:intergenic
GGCACCGTTGTAGACTCCCG+TGG 0.647612 7_1:+62986329 Msa1029530:CDS
GCAAAAGCAAGTAGTGAAGG+TGG 0.647740 7_1:-62986026 None:intergenic
TGGAAGATGTTAAGTGTCGG+AGG 0.649478 7_1:+62988848 Msa1029530:CDS
GAACCCGTCGTCGATGTCGG+AGG 0.653946 7_1:+62986281 Msa1029530:CDS
GTTATCTGTGGGAATAGTGG+TGG 0.656068 7_1:-62985883 None:intergenic
TCAGGTAGTAGTGATACACT+TGG 0.656071 7_1:+62988239 Msa1029530:intron
GTGTTGGTCGTGACTTGGTG+AGG 0.664616 7_1:-62986732 None:intergenic
GGCGGCCTCAAATTTGACCG+AGG 0.665068 7_1:-62987286 None:intergenic
TGTTGCCGGTGGAAGTACGA+CGG 0.666120 7_1:-62986211 None:intergenic
TCGTCGGAAGTAAAGAAAGA+CGG 0.671561 7_1:-62986177 None:intergenic
AAGTGAGAACCAGCTCTGAG+AGG 0.672321 7_1:+62987422 Msa1029530:CDS
AAAGCAAGTAGTGAAGGTGG+TGG 0.672403 7_1:-62986023 None:intergenic
GCATTGGATTAACCGGAACA+GGG 0.672778 7_1:-62989299 None:intergenic
TTCTGTAATCTCCTTCACAA+GGG 0.675756 7_1:-62989130 None:intergenic
GTTGAAGGTGGAGAATGAAG+TGG 0.677641 7_1:-62985837 None:intergenic
GGGAGTCTACAACGGTGCCG+AGG 0.681299 7_1:-62986325 None:intergenic
GATTTGTTCCGATATTCATG+CGG 0.682298 7_1:-62988663 None:intergenic
CTGATGTCAAAGGAGCAGAT+GGG 0.684126 7_1:+62988731 Msa1029530:CDS
AAGTGACAAATGAGTGTGTG+GGG 0.684846 7_1:+62987350 Msa1029530:CDS
GAAACTCCTCCTCCTCGCGG+CGG 0.688081 7_1:+62986359 Msa1029530:CDS
AGGAACTACAAACTTAGCAG+AGG 0.688364 7_1:+62988978 Msa1029530:CDS
GGTGGACGAGAAAGCTCCGG+TGG 0.689811 7_1:+62986533 Msa1029530:CDS
AAAGGACAAGAACAAGAACA+AGG 0.697173 7_1:-62985670 None:intergenic
GAAGGAGGTGCTAACTCCGG+CGG 0.703813 7_1:-62987304 None:intergenic
GAGTAGTTATCGCCACGCGG+CGG 0.706647 7_1:-62986464 None:intergenic
GCCGAGGTAGAGAAAATCGG+AGG 0.709735 7_1:-62986309 None:intergenic
AGCTGCAATTCAAACCAATG+GGG 0.712313 7_1:+62987118 Msa1029530:CDS
GCTTCTGTTAACGACAACGG+CGG 0.731811 7_1:-62986585 None:intergenic
TCGGAGTAGTTATCGCCACG+CGG 0.752385 7_1:-62986467 None:intergenic
AGTGACAAATGAGTGTGTGG+GGG 0.756743 7_1:+62987351 Msa1029530:CDS
TGGCGATAACTACTCCGACG+AGG 0.773819 7_1:+62986472 Msa1029530:CDS
GATGAAACTCCTCCTCCTCG+CGG 0.789296 7_1:+62986356 Msa1029530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTTCATATATTTTTAAAT+TGG + chr7_1:62988558-62988577 Msa1029530:intron 10.0%
!! AAAGTAATCAACATAAAAAT+AGG - chr7_1:62987521-62987540 None:intergenic 15.0%
!! TTTATGGAGAAAAATGAAAA+TGG + chr7_1:62986878-62986897 Msa1029530:CDS 20.0%
!!! TTACTTTCTTTTAGCTTTTT+TGG + chr7_1:62987534-62987553 Msa1029530:intron 20.0%
!! TTGAACTAAGTAAATTGAAT+TGG + chr7_1:62987809-62987828 Msa1029530:intron 20.0%
!! TGAACTAAGTAAATTGAATT+GGG + chr7_1:62987810-62987829 Msa1029530:intron 20.0%
!! AATGAACAACTTTATTAGAA+TGG + chr7_1:62989059-62989078 Msa1029530:CDS 20.0%
! GTGTTGAAAAAATGTTGAAA+AGG - chr7_1:62985483-62985502 None:intergenic 25.0%
! TAAGAAGATGGTAAACAAAA+AGG - chr7_1:62985691-62985710 None:intergenic 25.0%
!!! TTTGATTTTGGTTTTGGTTT+GGG - chr7_1:62985953-62985972 None:intergenic 25.0%
!!! TTTTGATTTTGGTTTTGGTT+TGG - chr7_1:62985954-62985973 None:intergenic 25.0%
!!! TTTGGTTTTGATTTTGGTTT+TGG - chr7_1:62985959-62985978 None:intergenic 25.0%
! ATCATTAGAAGAGAGATTTA+TGG + chr7_1:62986862-62986881 Msa1029530:CDS 25.0%
! TTGGTGTATCTTAGATAATT+TGG + chr7_1:62987553-62987572 Msa1029530:intron 25.0%
! TTCAGTTGTTTATCCAAAAA+GGG - chr7_1:62987682-62987701 None:intergenic 25.0%
! ATATTACTATATGCTGCAAT+TGG + chr7_1:62987781-62987800 Msa1029530:intron 25.0%
!! ATTTTCTGTAGTTGTTGTAT+TGG + chr7_1:62988079-62988098 Msa1029530:intron 25.0%
! ACAAGGATTACAATTTAACT+AGG - chr7_1:62988127-62988146 None:intergenic 25.0%
! AATTGTAATCCTTGTTCATA+AGG + chr7_1:62988132-62988151 Msa1029530:intron 25.0%
!!! TCTTGAAAGCTTGTTAAAAA+TGG + chr7_1:62988271-62988290 Msa1029530:CDS 25.0%
! AAAATCATTTCAAACTCTAG+AGG + chr7_1:62988466-62988485 Msa1029530:CDS 25.0%
!! GAGATTACAGAATATTTTCA+TGG + chr7_1:62989141-62989160 Msa1029530:CDS 25.0%
!! AGAATATTTTCATGGAAACT+TGG + chr7_1:62989149-62989168 Msa1029530:CDS 25.0%
!!! AAACAGAAATCTTTTAGCTA+AGG - chr7_1:62989396-62989415 None:intergenic 25.0%
! TTCTGTTTATGTAGAGTAAA+AGG + chr7_1:62989408-62989427 Msa1029530:three_prime_UTR 25.0%
! TCTGTTTATGTAGAGTAAAA+GGG + chr7_1:62989409-62989428 Msa1029530:three_prime_UTR 25.0%
! TGAACTTTAATTGAAAGCAA+AGG - chr7_1:62989503-62989522 None:intergenic 25.0%
!! TGGTAATGGAAGTAGATTAT+TGG - chr7_1:62985577-62985596 None:intergenic 30.0%
!!! GAGGTTTTAAGAGAGAAAAT+GGG - chr7_1:62985605-62985624 None:intergenic 30.0%
!!! AGAGGTTTTAAGAGAGAAAA+TGG - chr7_1:62985606-62985625 None:intergenic 30.0%
!!! TTTGTTGTTGGTTTTTGCTA+GGG - chr7_1:62985643-62985662 None:intergenic 30.0%
!!! TTTTGTTGTTGGTTTTTGCT+AGG - chr7_1:62985644-62985663 None:intergenic 30.0%
TTGTTTACCATCTTCTTAGA+AGG + chr7_1:62985693-62985712 Msa1029530:CDS 30.0%
!!! ATGGGTTTTGGTTTTGATTT+TGG - chr7_1:62985965-62985984 None:intergenic 30.0%
! TCTTGTTCTTCTTCTTCTTT+TGG + chr7_1:62986626-62986645 Msa1029530:CDS 30.0%
CTTTATCAGAACAACCATTA+AGG + chr7_1:62986903-62986922 Msa1029530:CDS 30.0%
! GAAACATTAGATAGCCTTAA+TGG - chr7_1:62986920-62986939 None:intergenic 30.0%
! ATCATCTTCATAGTTTTCTC+AGG - chr7_1:62986971-62986990 None:intergenic 30.0%
ACTATGAAGATGATGTATCA+AGG + chr7_1:62986977-62986996 Msa1029530:CDS 30.0%
TCAGTTGTTTATCCAAAAAG+GGG - chr7_1:62987681-62987700 None:intergenic 30.0%
GTTCAGTTGTTTATCCAAAA+AGG - chr7_1:62987683-62987702 None:intergenic 30.0%
TAAACTACTAAGCTATCTAC+TGG - chr7_1:62987741-62987760 None:intergenic 30.0%
CTAAGTAAATTGAATTGGGT+TGG + chr7_1:62987814-62987833 Msa1029530:intron 30.0%
!!! GCAATATTTTGAGACTTCTT+TGG - chr7_1:62987964-62987983 None:intergenic 30.0%
AAATATTGCAATCTTGCTCA+AGG + chr7_1:62987975-62987994 Msa1029530:CDS 30.0%
! TATTTTCTCATTCCTGCATT+AGG + chr7_1:62988044-62988063 Msa1029530:intron 30.0%
!! TGGATTAGTAGTTATTGAGT+AGG + chr7_1:62988099-62988118 Msa1029530:intron 30.0%
CCAAGGTAAATATTTGAAGA+CGG - chr7_1:62988188-62988207 None:intergenic 30.0%
AACTAAATTTACCTTTCCTC+AGG + chr7_1:62988221-62988240 Msa1029530:intron 30.0%
ACGTAAATTGAAGGAACATA+AGG + chr7_1:62988313-62988332 Msa1029530:CDS 30.0%
! TGTTGCTGAGAAATTTTTGA+AGG + chr7_1:62988358-62988377 Msa1029530:CDS 30.0%
ATATACCTTTCGCGTTTAAA+AGG + chr7_1:62988390-62988409 Msa1029530:CDS 30.0%
TATACCTTTCGCGTTTAAAA+GGG + chr7_1:62988391-62988410 Msa1029530:CDS 30.0%
!! GTCAATTTTCAATCTGAAGT+AGG + chr7_1:62988434-62988453 Msa1029530:CDS 30.0%
!!! TTTTAAATTGGCGCTTTTTC+AGG + chr7_1:62988570-62988589 Msa1029530:intron 30.0%
TAGAAGCTGTACTTAAAACT+GGG + chr7_1:62988638-62988657 Msa1029530:CDS 30.0%
TACAACAAAATGTAGTAGAG+TGG - chr7_1:62988761-62988780 None:intergenic 30.0%
!! TCTACTACATTTTGTTGTAC+AGG + chr7_1:62988762-62988781 Msa1029530:CDS 30.0%
CAGGAAATTATTAGAACTGA+AGG + chr7_1:62988781-62988800 Msa1029530:CDS 30.0%
TCAGATTAGAAACAACTTGT+AGG - chr7_1:62988879-62988898 None:intergenic 30.0%
CAGCTTTCTTTACATTTGAT+AGG - chr7_1:62988909-62988928 None:intergenic 30.0%
! TGTAAATAGAGCTTTTCAAC+TGG + chr7_1:62989471-62989490 Msa1029530:three_prime_UTR 30.0%
!! GCTTTTAGTTGCATAAGAGA+AGG - chr7_1:62985550-62985569 None:intergenic 35.0%
!! CAAGGTTTGCATTTTGTTGT+TGG - chr7_1:62985655-62985674 None:intergenic 35.0%
AAAGGACAAGAACAAGAACA+AGG - chr7_1:62985673-62985692 None:intergenic 35.0%
! ATGAGATCCTTCTAAGAAGA+TGG - chr7_1:62985703-62985722 None:intergenic 35.0%
!!! TTGGGTTTTGGTTTTGGTTT+GGG - chr7_1:62985923-62985942 None:intergenic 35.0%
!!! TTTGGGTTTTGGTTTTGGTT+TGG - chr7_1:62985924-62985943 None:intergenic 35.0%
AGTTTGGGAAAAATGGTGAT+GGG - chr7_1:62985983-62986002 None:intergenic 35.0%
TAGTTTGGGAAAAATGGTGA+TGG - chr7_1:62985984-62986003 None:intergenic 35.0%
TTGTTAGAAGAGTGAGAAGT+TGG - chr7_1:62986101-62986120 None:intergenic 35.0%
TTATCGTAAACTTGAATCGC+CGG + chr7_1:62986391-62986410 Msa1029530:CDS 35.0%
!! TGATTTTTGTTGTGTTCTCC+GGG - chr7_1:62986705-62986724 None:intergenic 35.0%
!! GTGATTTTTGTTGTGTTCTC+CGG - chr7_1:62986706-62986725 None:intergenic 35.0%
TCGTCATCAAAATCTCTTTC+TGG - chr7_1:62986806-62986825 None:intergenic 35.0%
TAATGATGCATGTGCATTTG+TGG - chr7_1:62986849-62986868 None:intergenic 35.0%
! ATAGTTTTCTCAGGTGAAGA+AGG - chr7_1:62986962-62986981 None:intergenic 35.0%
TCAGAAACACTTGACATTCT+TGG - chr7_1:62987016-62987035 None:intergenic 35.0%
! AGAATGTCAAGTGTTTCTGA+CGG + chr7_1:62987016-62987035 Msa1029530:CDS 35.0%
TTAGCTGCAATTCAAACCAA+TGG + chr7_1:62987116-62987135 Msa1029530:CDS 35.0%
TAGCTGCAATTCAAACCAAT+GGG + chr7_1:62987117-62987136 Msa1029530:CDS 35.0%
ACTTGATTCTGCAACACAAA+AGG - chr7_1:62987334-62987353 None:intergenic 35.0%
TCTTGTATGCTTCATCATTG+TGG + chr7_1:62987616-62987635 Msa1029530:intron 35.0%
!!! ATTTTAAGTTGCGACTTGTG+AGG + chr7_1:62987644-62987663 Msa1029530:intron 35.0%
CAGTTGTTTATCCAAAAAGG+GGG - chr7_1:62987680-62987699 None:intergenic 35.0%
ATGGAAATAGCTTACGAGTT+TGG - chr7_1:62987705-62987724 None:intergenic 35.0%
!! TACTGGCTTATTTGAGCTTA+TGG - chr7_1:62987724-62987743 None:intergenic 35.0%
GCTCTTAATGTCACAATAGA+AGG + chr7_1:62987997-62988016 Msa1029530:CDS 35.0%
TCATTCCTGCATTAGGTTTA+TGG + chr7_1:62988051-62988070 Msa1029530:intron 35.0%
CCGTCTTCAAATATTTACCT+TGG + chr7_1:62988185-62988204 Msa1029530:intron 35.0%
GGAAGAAGAACGTAAATTGA+AGG + chr7_1:62988304-62988323 Msa1029530:CDS 35.0%
CTAGAAGCTGTACTTAAAAC+TGG + chr7_1:62988637-62988656 Msa1029530:CDS 35.0%
! GATTTGTTCCGATATTCATG+CGG - chr7_1:62988666-62988685 None:intergenic 35.0%
ATGAATATCGGAACAAATCG+CGG + chr7_1:62988667-62988686 Msa1029530:CDS 35.0%
AACTACAAGCTCTACTTTGA+TGG + chr7_1:62988828-62988847 Msa1029530:CDS 35.0%
TGATGGAAGATGTTAAGTGT+CGG + chr7_1:62988845-62988864 Msa1029530:CDS 35.0%
TGTAAAGAAAGCTGCTACTA+TGG + chr7_1:62988915-62988934 Msa1029530:CDS 35.0%
GATGTCTTGAAACTTTCCAA+AGG + chr7_1:62988958-62988977 Msa1029530:CDS 35.0%
TGCTAAGTTTGTAGTTCCTT+TGG - chr7_1:62988977-62988996 None:intergenic 35.0%
ATGCAGTTAATCGAAAAGGT+AGG + chr7_1:62989003-62989022 Msa1029530:CDS 35.0%
CAACTTTATTAGAATGGCTG+AGG + chr7_1:62989065-62989084 Msa1029530:CDS 35.0%
TTCTGTAATCTCCTTCACAA+GGG - chr7_1:62989133-62989152 None:intergenic 35.0%
ATTCTGTAATCTCCTTCACA+AGG - chr7_1:62989134-62989153 None:intergenic 35.0%
! TTTTCATGGAAACTTGGCAA+AGG + chr7_1:62989155-62989174 Msa1029530:CDS 35.0%
TCATCCATTCAGAATCTTCT+TGG + chr7_1:62989185-62989204 Msa1029530:CDS 35.0%
ACAACCAAGAAGATTCTGAA+TGG - chr7_1:62989192-62989211 None:intergenic 35.0%
!!! ATTTTTTAGCCGTTCTTGAC+AGG + chr7_1:62989217-62989236 Msa1029530:CDS 35.0%
!!! TTTTTTAGCCGTTCTTGACA+GGG + chr7_1:62989218-62989237 Msa1029530:CDS 35.0%
AGCTAATAAATTCCCTGTTC+CGG + chr7_1:62989287-62989306 Msa1029530:CDS 35.0%
GAAAATGGGAGAAGTGGTAA+TGG - chr7_1:62985591-62985610 None:intergenic 40.0%
AAGAGAGAAAATGGGAGAAG+TGG - chr7_1:62985597-62985616 None:intergenic 40.0%
!!! TGTTGGTTTTTGCTAGGGTT+TGG - chr7_1:62985638-62985657 None:intergenic 40.0%
AGAGAGTTCAATGGCACAAA+GGG - chr7_1:62985777-62985796 None:intergenic 40.0%
!!! TGTTTGGGGTTTTTGGTTGA+AGG - chr7_1:62985855-62985874 None:intergenic 40.0%
!! AAATGGGTGTTTGGGGTTTT+TGG - chr7_1:62985862-62985881 None:intergenic 40.0%
! TGGGAATAGTGGTGGAAAAT+GGG - chr7_1:62985878-62985897 None:intergenic 40.0%
GTTGTTATCTGTGGGAATAG+TGG - chr7_1:62985889-62985908 None:intergenic 40.0%
TGAGTAGGGTTGTTATCTGT+GGG - chr7_1:62985897-62985916 None:intergenic 40.0%
TTGAGTAGGGTTGTTATCTG+TGG - chr7_1:62985898-62985917 None:intergenic 40.0%
!! TTTGGTTTGGGTCTTGAGTA+GGG - chr7_1:62985911-62985930 None:intergenic 40.0%
!!! TTTTGGTTTGGGTCTTGAGT+AGG - chr7_1:62985912-62985931 None:intergenic 40.0%
!!! CTTGGTTTGGGTTTTGGTTT+TGG - chr7_1:62985929-62985948 None:intergenic 40.0%
!! TTTGGTTTGGGTCTTGGTTT+GGG - chr7_1:62985941-62985960 None:intergenic 40.0%
!!! TTTTGGTTTGGGTCTTGGTT+TGG - chr7_1:62985942-62985961 None:intergenic 40.0%
!!! TTTGGTTTTGGTTTGGGTCT+TGG - chr7_1:62985917-62985936 None:intergenic 40.0%
!!! GGAAAAATGGTGATGGGTTT+TGG - chr7_1:62985977-62985996 None:intergenic 40.0%
AGAGGGTAGTTTGGGAAAAA+TGG - chr7_1:62985990-62986009 None:intergenic 40.0%
GTGATGAAAGAGGGTAGTTT+GGG - chr7_1:62985998-62986017 None:intergenic 40.0%
GAAGCAAAAGCAAGTAGTGA+AGG - chr7_1:62986032-62986051 None:intergenic 40.0%
! AGAAGAGTGAGAAGTTGGTT+GGG - chr7_1:62986096-62986115 None:intergenic 40.0%
! TAGAAGAGTGAGAAGTTGGT+TGG - chr7_1:62986097-62986116 None:intergenic 40.0%
GAAGTAAAGAAAGACGGAGA+TGG - chr7_1:62986174-62986193 None:intergenic 40.0%
TCGTCGGAAGTAAAGAAAGA+CGG - chr7_1:62986180-62986199 None:intergenic 40.0%
AAACTCTTCATCTTCCTCGT+CGG - chr7_1:62986489-62986508 None:intergenic 40.0%
GTTGCTTCTGTTAACGACAA+CGG - chr7_1:62986591-62986610 None:intergenic 40.0%
!! GATTTTTGTTGTGTTCTCCG+GGG - chr7_1:62986704-62986723 None:intergenic 40.0%
AAGAACGATATTCCACGTGT+TGG - chr7_1:62986751-62986770 None:intergenic 40.0%
AAAGCTACCTGGTATGTCAT+CGG + chr7_1:62987042-62987061 Msa1029530:CDS 40.0%
! GGTTTCAGGTGATGAAAGTA+GGG - chr7_1:62987083-62987102 None:intergenic 40.0%
AGCTGCAATTCAAACCAATG+GGG + chr7_1:62987118-62987137 Msa1029530:CDS 40.0%
GTGAAGAAAATGTTCCCCAT+TGG - chr7_1:62987135-62987154 None:intergenic 40.0%
! TTTCTTCACAGAGGAAGCAT+TGG + chr7_1:62987146-62987165 Msa1029530:CDS 40.0%
!! TTCTTCACAGAGGAAGCATT+GGG + chr7_1:62987147-62987166 Msa1029530:CDS 40.0%
GCAATCTGCTTGGATATAAC+CGG - chr7_1:62987178-62987197 None:intergenic 40.0%
!! TTGGGAAGTGTCTAGAAGTT+CGG + chr7_1:62987249-62987268 Msa1029530:CDS 40.0%
ATCAACCTCGGTCAAATTTG+AGG + chr7_1:62987281-62987300 Msa1029530:CDS 40.0%
TCAAGTGACAAATGAGTGTG+TGG + chr7_1:62987348-62987367 Msa1029530:CDS 40.0%
CAAGTGACAAATGAGTGTGT+GGG + chr7_1:62987349-62987368 Msa1029530:CDS 40.0%
AAGTGACAAATGAGTGTGTG+GGG + chr7_1:62987350-62987369 Msa1029530:CDS 40.0%
AACAGCAAACCAAAAACCCA+CGG + chr7_1:62987882-62987901 Msa1029530:CDS 40.0%
!! GTGTGTGAAGCACTTTTAGA+AGG + chr7_1:62988021-62988040 Msa1029530:CDS 40.0%
GAAAGCCATAAACCTAATGC+AGG - chr7_1:62988059-62988078 None:intergenic 40.0%
ATCAGCGTACCTTATGAACA+AGG - chr7_1:62988144-62988163 None:intergenic 40.0%
AGTTGCATTATCAGTCTCCA+AGG - chr7_1:62988205-62988224 None:intergenic 40.0%
TATCACTACTACCTGAGGAA+AGG - chr7_1:62988235-62988254 None:intergenic 40.0%
AAGTGTATCACTACTACCTG+AGG - chr7_1:62988240-62988259 None:intergenic 40.0%
TCAGGTAGTAGTGATACACT+TGG + chr7_1:62988239-62988258 Msa1029530:intron 40.0%
TTACGTTCTTCTTCCTTGCT+CGG - chr7_1:62988299-62988318 None:intergenic 40.0%
TTTCTCAGCAACATCAAGCT+TGG - chr7_1:62988351-62988370 None:intergenic 40.0%
ACTCGATACACTTCTCAAGT+TGG + chr7_1:62988708-62988727 Msa1029530:CDS 40.0%
AGGAACTACAAACTTAGCAG+AGG + chr7_1:62988978-62988997 Msa1029530:CDS 40.0%
GGTCATGCAGTTAATCGAAA+AGG + chr7_1:62988999-62989018 Msa1029530:CDS 40.0%
TAGGATCTGATGAAAGCAGT+CGG + chr7_1:62989022-62989041 Msa1029530:CDS 40.0%
CTTTATTAGAATGGCTGAGG+AGG + chr7_1:62989068-62989087 Msa1029530:CDS 40.0%
!! TGTGGAAGCATTGGATTAAC+CGG - chr7_1:62989309-62989328 None:intergenic 40.0%
TCTTTACTTCCGTGTAATCC+AGG - chr7_1:62989339-62989358 None:intergenic 40.0%
!! AGGGTTTGGTGAAGTGAAAG+AGG - chr7_1:62985624-62985643 None:intergenic 45.0%
ATGGCACAAAGGGTTCATGA+AGG - chr7_1:62985767-62985786 None:intergenic 45.0%
GAGAGAGTTCAATGGCACAA+AGG - chr7_1:62985778-62985797 None:intergenic 45.0%
ATTGTGGTGGTTCAGATGGA+GGG - chr7_1:62985800-62985819 None:intergenic 45.0%
GTTGAAGGTGGAGAATGAAG+TGG - chr7_1:62985840-62985859 None:intergenic 45.0%
!!! TTGGGGTTTTTGGTTGAAGG+TGG - chr7_1:62985852-62985871 None:intergenic 45.0%
TGGTGGAAAATGGGTGTTTG+GGG - chr7_1:62985869-62985888 None:intergenic 45.0%
! GTGGTGGAAAATGGGTGTTT+GGG - chr7_1:62985870-62985889 None:intergenic 45.0%
! AGTGGTGGAAAATGGGTGTT+TGG - chr7_1:62985871-62985890 None:intergenic 45.0%
! GTGGGAATAGTGGTGGAAAA+TGG - chr7_1:62985879-62985898 None:intergenic 45.0%
GTTATCTGTGGGAATAGTGG+TGG - chr7_1:62985886-62985905 None:intergenic 45.0%
!!! TTGGGTCTTGGTTTGGGTTT+TGG - chr7_1:62985935-62985954 None:intergenic 45.0%
GGTGATGAAAGAGGGTAGTT+TGG - chr7_1:62985999-62986018 None:intergenic 45.0%
AAAGCAAGTAGTGAAGGTGG+TGG - chr7_1:62986026-62986045 None:intergenic 45.0%
GCAAAAGCAAGTAGTGAAGG+TGG - chr7_1:62986029-62986048 None:intergenic 45.0%
ATTAGCGAGGAGATGTTAGC+AGG - chr7_1:62986059-62986078 None:intergenic 45.0%
! AAGAGTGAGAAGTTGGTTGG+GGG - chr7_1:62986094-62986113 None:intergenic 45.0%
! GAAGAGTGAGAAGTTGGTTG+GGG - chr7_1:62986095-62986114 None:intergenic 45.0%
!! GGATCTTAGAGTCTTGTTGC+CGG - chr7_1:62986228-62986247 None:intergenic 45.0%
! GAAAAGCTCAACGCTGCTTT+CGG - chr7_1:62986249-62986268 None:intergenic 45.0%
! ACCTCCGATTTTCTCTACCT+CGG + chr7_1:62986308-62986327 Msa1029530:CDS 45.0%
!! AGGAGTTTCATCGATTCCAC+GGG - chr7_1:62986348-62986367 None:intergenic 45.0%
!! GAGGAGTTTCATCGATTCCA+CGG - chr7_1:62986349-62986368 None:intergenic 45.0%
!!! TTCTTCTTCTTTTGGCTCGC+CGG + chr7_1:62986634-62986653 Msa1029530:CDS 45.0%
! CGGTTTCAGGTGATGAAAGT+AGG - chr7_1:62987084-62987103 None:intergenic 45.0%
TCATCACCTGAAACCGAAAG+AGG + chr7_1:62987088-62987107 Msa1029530:CDS 45.0%
! GGGGAACATTTTCTTCACAG+AGG + chr7_1:62987137-62987156 Msa1029530:CDS 45.0%
CGGCGATTGTTTATCAACCT+CGG + chr7_1:62987269-62987288 Msa1029530:CDS 45.0%
AGTGACAAATGAGTGTGTGG+GGG + chr7_1:62987351-62987370 Msa1029530:CDS 45.0%
CAATGCAGCGGCTTCAATTT+CGG - chr7_1:62987397-62987416 None:intergenic 45.0%
GAAATTGAAGCCGCTGCATT+GGG + chr7_1:62987396-62987415 Msa1029530:CDS 45.0%
CTCACTTTATCCCAATGCAG+CGG - chr7_1:62987409-62987428 None:intergenic 45.0%
! GAACACTTAAGCCCCCTTTT+TGG + chr7_1:62987666-62987685 Msa1029530:intron 45.0%
! GGTTGGTTGCAGATTGAATG+AGG + chr7_1:62987831-62987850 Msa1029530:intron 45.0%
! GTTAAAAATGGCACCGAGCA+AGG + chr7_1:62988283-62988302 Msa1029530:CDS 45.0%
TCAGCAACATCAAGCTTGGT+CGG - chr7_1:62988347-62988366 None:intergenic 45.0%
! TCGACCCTTTTAAACGCGAA+AGG - chr7_1:62988398-62988417 None:intergenic 45.0%
GGTCGAAGCAATGCTTTACA+TGG + chr7_1:62988412-62988431 Msa1029530:CDS 45.0%
ACTGGGAACCGCATGAATAT+CGG + chr7_1:62988655-62988674 Msa1029530:CDS 45.0%
!! CTCAAGTTGGCTGATGTCAA+AGG + chr7_1:62988721-62988740 Msa1029530:CDS 45.0%
CTGATGTCAAAGGAGCAGAT+GGG + chr7_1:62988731-62988750 Msa1029530:CDS 45.0%
!! TGGAAGATGTTAAGTGTCGG+AGG + chr7_1:62988848-62988867 Msa1029530:CDS 45.0%
GACATCACTGCTGAGAACTT+CGG - chr7_1:62988944-62988963 None:intergenic 45.0%
!! TGTTGCTTTGACCCTTGTGA+AGG + chr7_1:62989119-62989138 Msa1029530:CDS 45.0%
TTTGCAGACCCTGTCAAGAA+CGG - chr7_1:62989229-62989248 None:intergenic 45.0%
!! GGTCTGCAAAGAAGTTGGTA+TGG + chr7_1:62989239-62989258 Msa1029530:CDS 45.0%
GCATTGGATTAACCGGAACA+GGG - chr7_1:62989302-62989321 None:intergenic 45.0%
! AGCATTGGATTAACCGGAAC+AGG - chr7_1:62989303-62989322 None:intergenic 45.0%
TGTAATCCAGGAAGTGGTTG+TGG - chr7_1:62989327-62989346 None:intergenic 45.0%
CAACCACTTCCTGGATTACA+CGG + chr7_1:62989327-62989346 Msa1029530:CDS 45.0%
!! AATTTAAAAATATATGAAAT+CGG - chr7_1:62988559-62988578 None:intergenic 5.0%
GATGGAGGGAGAGAGTTCAA+TGG - chr7_1:62985786-62985805 None:intergenic 50.0%
GATTGTGGTGGTTCAGATGG+AGG - chr7_1:62985801-62985820 None:intergenic 50.0%
GGTGATTGTGGTGGTTCAGA+TGG - chr7_1:62985804-62985823 None:intergenic 50.0%
!! GAATGAAGTGGTGGTGGTTG+TGG - chr7_1:62985828-62985847 None:intergenic 50.0%
GAAGGTGGAGAATGAAGTGG+TGG - chr7_1:62985837-62985856 None:intergenic 50.0%
! AAGTAGTGAAGGTGGTGGTG+GGG - chr7_1:62986021-62986040 None:intergenic 50.0%
! CAAGTAGTGAAGGTGGTGGT+GGG - chr7_1:62986022-62986041 None:intergenic 50.0%
GGTGTGAGGAAGAATTAGCG+AGG - chr7_1:62986072-62986091 None:intergenic 50.0%
! AGAGTGAGAAGTTGGTTGGG+GGG - chr7_1:62986093-62986112 None:intergenic 50.0%
!! CAGTAGCGGAGAGTGCTATA+GGG - chr7_1:62986130-62986149 None:intergenic 50.0%
! TGGAAGTACGACGGTTATGG+AGG - chr7_1:62986205-62986224 None:intergenic 50.0%
CATAACCGTCGTACTTCCAC+CGG + chr7_1:62986206-62986225 Msa1029530:CDS 50.0%
!! TCTTAGAGTCTTGTTGCCGG+TGG - chr7_1:62986225-62986244 None:intergenic 50.0%
! GGTGCCGAGGTAGAGAAAAT+CGG - chr7_1:62986315-62986334 None:intergenic 50.0%
GATTCCACGGGAGTCTACAA+CGG - chr7_1:62986336-62986355 None:intergenic 50.0%
! GAAGAGTTTTACTCGCCGAG+AGG + chr7_1:62986500-62986519 Msa1029530:CDS 50.0%
GGAAGATGATTCCGTACCAC+CGG - chr7_1:62986552-62986571 None:intergenic 50.0%
GTGGTACGGAATCATCTTCC+CGG + chr7_1:62986552-62986571 Msa1029530:CDS 50.0%
GCTTCTGTTAACGACAACGG+CGG - chr7_1:62986588-62986607 None:intergenic 50.0%
CTCATCGAATGAGACTGCTC+CGG - chr7_1:62986656-62986675 None:intergenic 50.0%
TTGTTGTGTTCTCCGGGGAT+TGG - chr7_1:62986699-62986718 None:intergenic 50.0%
TCTGACGGTTCAAAGCTACC+TGG + chr7_1:62987031-62987050 Msa1029530:CDS 50.0%
TCAGGTGATGAAAGTAGGGC+TGG - chr7_1:62987079-62987098 None:intergenic 50.0%
TCACCTGAAACCGAAAGAGG+AGG + chr7_1:62987091-62987110 Msa1029530:CDS 50.0%
CACCTGAAACCGAAAGAGGA+GGG + chr7_1:62987092-62987111 Msa1029530:CDS 50.0%
AACCCTCCTCTTTCGGTTTC+AGG - chr7_1:62987097-62987116 None:intergenic 50.0%
GCAGCTAAACCCTCCTCTTT+CGG - chr7_1:62987104-62987123 None:intergenic 50.0%
!! GAGGAAGCATTGGGAGATTC+CGG + chr7_1:62987156-62987175 Msa1029530:CDS 50.0%
AGCAGCGACAGAGGAAACAT+TGG + chr7_1:62987230-62987249 Msa1029530:CDS 50.0%
GCAGCGACAGAGGAAACATT+GGG + chr7_1:62987231-62987250 Msa1029530:CDS 50.0%
AACACAAAAGGCCTCGAAGG+AGG - chr7_1:62987322-62987341 None:intergenic 50.0%
TGCAACACAAAAGGCCTCGA+AGG - chr7_1:62987325-62987344 None:intergenic 50.0%
CGAAATTGAAGCCGCTGCAT+TGG + chr7_1:62987395-62987414 Msa1029530:CDS 50.0%
!! AAGTGAGAACCAGCTCTGAG+AGG + chr7_1:62987422-62987441 Msa1029530:CDS 50.0%
!! AGTGAGAACCAGCTCTGAGA+GGG + chr7_1:62987423-62987442 Msa1029530:CDS 50.0%
!! AACCAGCTCTGAGAGGGAAA+TGG + chr7_1:62987429-62987448 Msa1029530:CDS 50.0%
! CTCTGAGAGGGAAATGGTGT+GGG + chr7_1:62987435-62987454 Msa1029530:CDS 50.0%
GCTGATGTCAAAGGAGCAGA+TGG + chr7_1:62988730-62988749 Msa1029530:CDS 50.0%
!! ACTGAAGGCATTCGTCTCTC+TGG + chr7_1:62988796-62988815 Msa1029530:CDS 50.0%
!! GATGTTAAGTGTCGGAGGCT+TGG + chr7_1:62988853-62988872 Msa1029530:CDS 50.0%
GACAGGGTCTGCAAAGAAGT+TGG + chr7_1:62989234-62989253 Msa1029530:CDS 50.0%
! GGAAGTGGTTGTGGAAGCAT+TGG - chr7_1:62989318-62989337 None:intergenic 50.0%
ATGCTTCCACAACCACTTCC+TGG + chr7_1:62989318-62989337 Msa1029530:CDS 50.0%
CTTCCGTGTAATCCAGGAAG+TGG - chr7_1:62989333-62989352 None:intergenic 50.0%
GGTTGTGGAGGTGATTGTGG+TGG - chr7_1:62985813-62985832 None:intergenic 55.0%
GGTGGTTGTGGAGGTGATTG+TGG - chr7_1:62985816-62985835 None:intergenic 55.0%
!! TGAAGTGGTGGTGGTTGTGG+AGG - chr7_1:62985825-62985844 None:intergenic 55.0%
GGTGGAGAATGAAGTGGTGG+TGG - chr7_1:62985834-62985853 None:intergenic 55.0%
! GTGGTGGGGGTGATGAAAGA+GGG - chr7_1:62986007-62986026 None:intergenic 55.0%
!! AGTAGTGAAGGTGGTGGTGG+GGG - chr7_1:62986020-62986039 None:intergenic 55.0%
! GCAAGTAGTGAAGGTGGTGG+TGG - chr7_1:62986023-62986042 None:intergenic 55.0%
!! GCAGTAGCGGAGAGTGCTAT+AGG - chr7_1:62986131-62986150 None:intergenic 55.0%
! CGGTGGAAGTACGACGGTTA+TGG - chr7_1:62986208-62986227 None:intergenic 55.0%
! TGTTGCCGGTGGAAGTACGA+CGG - chr7_1:62986214-62986233 None:intergenic 55.0%
TTTCCTCCGACATCGACGAC+GGG - chr7_1:62986287-62986306 None:intergenic 55.0%
GTTTCCTCCGACATCGACGA+CGG - chr7_1:62986288-62986307 None:intergenic 55.0%
GCCGAGGTAGAGAAAATCGG+AGG - chr7_1:62986312-62986331 None:intergenic 55.0%
GATGAAACTCCTCCTCCTCG+CGG + chr7_1:62986356-62986375 Msa1029530:CDS 55.0%
AACTTGAATCGCCGGAGCTC+CGG + chr7_1:62986399-62986418 Msa1029530:CDS 55.0%
TCGGAGTAGTTATCGCCACG+CGG - chr7_1:62986470-62986489 None:intergenic 55.0%
TGGCGATAACTACTCCGACG+AGG + chr7_1:62986472-62986491 Msa1029530:CDS 55.0%
CCACCAAGAGAAGAGCCTCT+CGG - chr7_1:62986518-62986537 None:intergenic 55.0%
! CTTGGTGGACGAGAAAGCTC+CGG + chr7_1:62986530-62986549 Msa1029530:CDS 55.0%
ACGAGAAAGCTCCGGTGGTA+CGG + chr7_1:62986538-62986557 Msa1029530:CDS 55.0%
TTCGATGAGTCTCTCACCGC+CGG + chr7_1:62986667-62986686 Msa1029530:CDS 55.0%
!! TCGTGACTTGGTGAGGCTTC+TGG - chr7_1:62986728-62986747 None:intergenic 55.0%
!! GTGTTGGTCGTGACTTGGTG+AGG - chr7_1:62986735-62986754 None:intergenic 55.0%
ACCAAGTCACGACCAACACG+TGG + chr7_1:62986736-62986755 Msa1029530:CDS 55.0%
! TCCACGTGTTGGTCGTGACT+TGG - chr7_1:62986740-62986759 None:intergenic 55.0%
!! AGAGGCACCGATGACATACC+AGG - chr7_1:62987052-62987071 None:intergenic 55.0%
! GAAAGTAGGGCTGGTGACAG+AGG - chr7_1:62987070-62987089 None:intergenic 55.0%
TGGCGGAGAAGCAATCTGCT+TGG - chr7_1:62987188-62987207 None:intergenic 55.0%
TGTTTCCTCTGTCGCTGCTG+CGG - chr7_1:62987229-62987248 None:intergenic 55.0%
! TCGGTCAAATTTGAGGCCGC+CGG + chr7_1:62987288-62987307 Msa1029530:CDS 55.0%
!! CTCGAAGGAGGTGCTAACTC+CGG - chr7_1:62987310-62987329 None:intergenic 55.0%
CACCATTTCCCTCTCAGAGC+TGG - chr7_1:62987434-62987453 None:intergenic 55.0%
!! GCTCTGAGAGGGAAATGGTG+TGG + chr7_1:62987434-62987453 Msa1029530:CDS 55.0%
! GAGCAGCATCCGTGGGTTTT+TGG - chr7_1:62987894-62987913 None:intergenic 55.0%
AGTACTCTGCCCTCCTGACT+TGG - chr7_1:62987937-62987956 None:intergenic 55.0%
CGGAACAAATCGCGGTGATG+CGG + chr7_1:62988675-62988694 Msa1029530:CDS 55.0%
AACAAATCGCGGTGATGCGG+AGG + chr7_1:62988678-62988697 Msa1029530:CDS 55.0%
!! GGTGGTGGGGGTGATGAAAG+AGG - chr7_1:62986008-62986027 None:intergenic 60.0%
! GAAGTTGGTTGGGGGGTGTG+AGG - chr7_1:62986086-62986105 None:intergenic 60.0%
GGAGATGGCAACAGCGACGA+CGG - chr7_1:62986159-62986178 None:intergenic 60.0%
!! GACGGTTATGGAGGCGTCGT+CGG - chr7_1:62986196-62986215 None:intergenic 60.0%
! TCCGACATCGACGACGGGTT+CGG - chr7_1:62986282-62986301 None:intergenic 60.0%
GAGTAGTTATCGCCACGCGG+CGG - chr7_1:62986467-62986486 None:intergenic 60.0%
TCGCCGAGAGGCTCTTCTCT+TGG + chr7_1:62986512-62986531 Msa1029530:CDS 60.0%
CCGAGAGGCTCTTCTCTTGG+TGG + chr7_1:62986515-62986534 Msa1029530:CDS 60.0%
GGCGGCCTCAAATTTGACCG+AGG - chr7_1:62987289-62987308 None:intergenic 60.0%
!! GAAGGAGGTGCTAACTCCGG+CGG - chr7_1:62987307-62987326 None:intergenic 60.0%
CGGAGTTAGCACCTCCTTCG+AGG + chr7_1:62987308-62987327 Msa1029530:CDS 60.0%
GATCGTGGAGCAGCATCCGT+GGG - chr7_1:62987901-62987920 None:intergenic 60.0%
CACGGATGCTGCTCCACGAT+CGG + chr7_1:62987900-62987919 Msa1029530:CDS 60.0%
GGTTCTTCCCCTGCCAAGTC+AGG + chr7_1:62987921-62987940 Msa1029530:CDS 60.0%
TCTTCCCCTGCCAAGTCAGG+AGG + chr7_1:62987924-62987943 Msa1029530:CDS 60.0%
CTTCCCCTGCCAAGTCAGGA+GGG + chr7_1:62987925-62987944 Msa1029530:CDS 60.0%
!! TCTGCCCTCCTGACTTGGCA+GGG - chr7_1:62987932-62987951 None:intergenic 60.0%
GACGACGGCGACTGCAGTAG+CGG - chr7_1:62986144-62986163 None:intergenic 65.0%
GCCGAACCCGTCGTCGATGT+CGG + chr7_1:62986278-62986297 Msa1029530:CDS 65.0%
GAACCCGTCGTCGATGTCGG+AGG + chr7_1:62986281-62986300 Msa1029530:CDS 65.0%
! GGGAGTCTACAACGGTGCCG+AGG - chr7_1:62986328-62986347 None:intergenic 65.0%
GGCACCGTTGTAGACTCCCG+TGG + chr7_1:62986329-62986348 Msa1029530:CDS 65.0%
GAAACTCCTCCTCCTCGCGG+CGG + chr7_1:62986359-62986378 Msa1029530:CDS 65.0%
TAAACCGAACCACCGCCGCG+AGG - chr7_1:62986374-62986393 None:intergenic 65.0%
GCGCTAACGGTGGAAGAGGC+CGG - chr7_1:62986421-62986440 None:intergenic 65.0%
GGCCTCTTCCACCGTTAGCG+CGG + chr7_1:62986420-62986439 Msa1029530:CDS 65.0%
AGCCGCGCTAACGGTGGAAG+AGG - chr7_1:62986425-62986444 None:intergenic 65.0%
GGTTCGGGAAGCCGCGCTAA+CGG - chr7_1:62986434-62986453 None:intergenic 65.0%
TAGTTATCGCCACGCGGCGG+CGG - chr7_1:62986464-62986483 None:intergenic 65.0%
GGTGGACGAGAAAGCTCCGG+TGG + chr7_1:62986533-62986552 Msa1029530:CDS 65.0%
AACGGCGGAGAATGCACGCC+GGG - chr7_1:62986573-62986592 None:intergenic 65.0%
CAACGGCGGAGAATGCACGC+CGG - chr7_1:62986574-62986593 None:intergenic 65.0%
CTCCGGGGATTGGAACTCGC+CGG - chr7_1:62986689-62986708 None:intergenic 65.0%
CGATCGTGGAGCAGCATCCG+TGG - chr7_1:62987902-62987921 None:intergenic 65.0%
GGCAGGGGAAGAACCGATCG+TGG - chr7_1:62987916-62987935 None:intergenic 65.0%
!! CTGCCCTCCTGACTTGGCAG+GGG - chr7_1:62987931-62987950 None:intergenic 65.0%
!! CTCTGCCCTCCTGACTTGGC+AGG - chr7_1:62987933-62987952 None:intergenic 65.0%
TCCTCCTCGCGGCGGTGGTT+CGG + chr7_1:62986367-62986386 Msa1029530:CDS 70.0%
GGTGGAAGAGGCCGGAGCTC+CGG - chr7_1:62986413-62986432 None:intergenic 70.0%
TCGGGAAGCCGCGCTAACGG+TGG - chr7_1:62986431-62986450 None:intergenic 70.0%
!! GGCGGCGGTGATGGAGGTTC+GGG - chr7_1:62986449-62986468 None:intergenic 70.0%
!! CGGCGGCGGTGATGGAGGTT+CGG - chr7_1:62986450-62986469 None:intergenic 70.0%
CGGGGATTGGAACTCGCCGG+CGG - chr7_1:62986686-62986705 None:intergenic 70.0%
CGCCGGCGAGTTCCAATCCC+CGG + chr7_1:62986684-62986703 Msa1029530:CDS 70.0%
TGCTGCGGCAGAGGAGGAGG+CGG - chr7_1:62987214-62987233 None:intergenic 70.0%
TGTCGCTGCTGCGGCAGAGG+AGG - chr7_1:62987220-62987239 None:intergenic 70.0%
CTCTGTCGCTGCTGCGGCAG+AGG - chr7_1:62987223-62987242 None:intergenic 70.0%
CTCTGCCGCAGCAGCGACAG+AGG + chr7_1:62987221-62987240 Msa1029530:CDS 70.0%
ACTCCTCCTCCTCGCGGCGG+TGG + chr7_1:62986362-62986381 Msa1029530:CDS 75.0%
GAACCACCGCCGCGAGGAGG+AGG - chr7_1:62986368-62986387 None:intergenic 75.0%
ACCGAACCACCGCCGCGAGG+AGG - chr7_1:62986371-62986390 None:intergenic 75.0%
AGAGGAGGAGGCGGCGGTGG+CGG - chr7_1:62987205-62987224 None:intergenic 75.0%
TGCGGCAGAGGAGGAGGCGG+CGG - chr7_1:62987211-62987230 None:intergenic 75.0%
CGCTGCTGCGGCAGAGGAGG+AGG - chr7_1:62987217-62987236 None:intergenic 75.0%
!! CCACGCGGCGGCGGTGATGG+AGG - chr7_1:62986455-62986474 None:intergenic 80.0%
! CCTCCATCACCGCCGCCGCG+TGG + chr7_1:62986452-62986471 Msa1029530:CDS 80.0%
! TCGCCACGCGGCGGCGGTGA+TGG - chr7_1:62986458-62986477 None:intergenic 80.0%
! GGCAGAGGAGGAGGCGGCGG+TGG - chr7_1:62987208-62987227 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 62985465 62989600 62985465 ID=Msa1029530;Name=Msa1029530
chr7_1 mRNA 62985465 62989600 62985465 ID=Msa1029530-mRNA-1;Parent=Msa1029530;Name=Msa1029530-mRNA-1;_AED=0.06;_eAED=0.06;_QI=198|1|1|1|0.75|0.6|5|202|1013
chr7_1 exon 62985465 62985917 62985465 ID=Msa1029530-mRNA-1:exon:13595;Parent=Msa1029530-mRNA-1
chr7_1 exon 62985948 62987482 62985948 ID=Msa1029530-mRNA-1:exon:13596;Parent=Msa1029530-mRNA-1
chr7_1 exon 62987843 62988042 62987843 ID=Msa1029530-mRNA-1:exon:13597;Parent=Msa1029530-mRNA-1
chr7_1 exon 62988243 62988487 62988243 ID=Msa1029530-mRNA-1:exon:13598;Parent=Msa1029530-mRNA-1
chr7_1 exon 62988592 62989600 62988592 ID=Msa1029530-mRNA-1:exon:13599;Parent=Msa1029530-mRNA-1
chr7_1 five_prime_UTR 62985465 62985662 62985465 ID=Msa1029530-mRNA-1:five_prime_utr;Parent=Msa1029530-mRNA-1
chr7_1 CDS 62985663 62985917 62985663 ID=Msa1029530-mRNA-1:cds;Parent=Msa1029530-mRNA-1
chr7_1 CDS 62985948 62987482 62985948 ID=Msa1029530-mRNA-1:cds;Parent=Msa1029530-mRNA-1
chr7_1 CDS 62987843 62988042 62987843 ID=Msa1029530-mRNA-1:cds;Parent=Msa1029530-mRNA-1
chr7_1 CDS 62988243 62988487 62988243 ID=Msa1029530-mRNA-1:cds;Parent=Msa1029530-mRNA-1
chr7_1 CDS 62988592 62989398 62988592 ID=Msa1029530-mRNA-1:cds;Parent=Msa1029530-mRNA-1
chr7_1 three_prime_UTR 62989399 62989600 62989399 ID=Msa1029530-mRNA-1:three_prime_utr;Parent=Msa1029530-mRNA-1
Gene Sequence

>Msa1029530

ATGCAAACCTTGTTCTTGTTCTTGTCCTTTTTGTTTACCATCTTCTTAGAAGGATCTCATTCTCATAAAACTTTTATCTTTCTCAACAACAATAGAAGAATCCTTCATGAACCCTTTGTGCCATTGAACTCTCTCCCTCCATCTGAACCACCACAATCACCTCCACAACCACCACCACTTCATTCTCCACCTTCAACCAAAAACCCCAAACACCCATTTTCCACCACTATTCCCACAGATAACAACCCTACTCAAGACCCAAACCAAAACCAAAATCAAAACCAAAACCCATCACCATTTTTCCCAAACTACCCTCTTTCATCACCCCCACCACCACCTTCACTACTTGCTTTTGCTTCATTTCCTGCTAACATCTCCTCGCTAATTCTTCCTCACACCCCCCAACCAACTTCTCACTCTTCTAACAAACTTCTCCCTATAGCACTCTCCGCTACTGCAGTCGCCGTCGTCGCTGTTGCCATCTCCGTCTTTCTTTACTTCCGACGACGCCTCCATAACCGTCGTACTTCCACCGGCAACAAGACTCTAAGATCCGAAAGCAGCGTTGAGCTTTTCTCGCGCAATGCCGAACCCGTCGTCGATGTCGGAGGAAACACCTCCGATTTTCTCTACCTCGGCACCGTTGTAGACTCCCGTGGAATCGATGAAACTCCTCCTCCTCGCGGCGGTGGTTCGGTTTATCGTAAACTTGAATCGCCGGAGCTCCGGCCTCTTCCACCGTTAGCGCGGCTTCCCGAACCTCCATCACCGCCGCCGCGTGGCGATAACTACTCCGACGAGGAAGATGAAGAGTTTTACTCGCCGAGAGGCTCTTCTCTTGGTGGACGAGAAAGCTCCGGTGGTACGGAATCATCTTCCCGGCGTGCATTCTCCGCCGTTGTCGTTAACAGAAGCAACAAATCAAGCTCAATTTCTTGTTCTTCTTCTTCTTTTGGCTCGCCGGAGCAGTCTCATTCGATGAGTCTCTCACCGCCGGCGAGTTCCAATCCCCGGAGAACACAACAAAAATCACCAGAAGCCTCACCAAGTCACGACCAACACGTGGAATATCGTTCTTCTTCTTCGTCGTTCTCTTCATCACGTTCAACACCAGAAAGAGATTTTGATGACGAGAAAGAAAATGCTTCTTTATCCACAAATGCACATGCATCATTAGAAGAGAGATTTATGGAGAAAAATGAAAATGGTTCTTTATCAGAACAACCATTAAGGCTATCTAATGTTTCATCTTCAGCATTTTCTCTTCCTTCTTCACCTGAGAAAACTATGAAGATGATGTATCAAGGTTTTGATCAGTCTCCAAGAATGTCAAGTGTTTCTGACGGTTCAAAGCTACCTGGTATGTCATCGGTGCCTCTGTCACCAGCCCTACTTTCATCACCTGAAACCGAAAGAGGAGGGTTTAGCTGCAATTCAAACCAATGGGGAACATTTTCTTCACAGAGGAAGCATTGGGAGATTCCGGTTATATCCAAGCAGATTGCTTCTCCGCCACCGCCGCCTCCTCCTCTGCCGCAGCAGCGACAGAGGAAACATTGGGAAGTGTCTAGAAGTTCGGCGATTGTTTATCAACCTCGGTCAAATTTGAGGCCGCCGGAGTTAGCACCTCCTTCGAGGCCTTTTGTGTTGCAGAATCAAGTGACAAATGAGTGTGTGGGGGAAACTGAAGAGAGTTCGAAACCGAAATTGAAGCCGCTGCATTGGGATAAAGTGAGAACCAGCTCTGAGAGGGAAATGGTGTGGGATCAGATGAATTCTATGTCTTTTAAATTGAATGAGGAAATGATTGAGACATTGTTTGTAGTGAAAACAGCAAACCAAAAACCCACGGATGCTGCTCCACGATCGGTTCTTCCCCTGCCAAGTCAGGAGGGCAGAGTACTTGATCCAAAGAAGTCTCAAAATATTGCAATCTTGCTCAAGGCTCTTAATGTCACAATAGAAGGAGTGTGTGAAGCACTTTTAGAAGGTAGTAGTGATACACTTGGAGCAGAGCTTCTTGAAAGCTTGTTAAAAATGGCACCGAGCAAGGAAGAAGAACGTAAATTGAAGGAACATAAGGATGACTCACCGACCAAGCTTGATGTTGCTGAGAAATTTTTGAAGGCATTGCTTGATATACCTTTCGCGTTTAAAAGGGTCGAAGCAATGCTTTACATGGTCAATTTTCAATCTGAAGTAGGCTATCTTAGAAAATCATTTCAAACTCTAGAGGCTGCATGTGAAGAGCTGCGAAATTGTAGAATGTTCTTGAAGCTTCTAGAAGCTGTACTTAAAACTGGGAACCGCATGAATATCGGAACAAATCGCGGTGATGCGGAGGCTTTCAAACTCGATACACTTCTCAAGTTGGCTGATGTCAAAGGAGCAGATGGGAAAACCACTCTACTACATTTTGTTGTACAGGAAATTATTAGAACTGAAGGCATTCGTCTCTCTGGTACTAATCAAACTACAAGCTCTACTTTGATGGAAGATGTTAAGTGTCGGAGGCTTGGCCTACAAGTTGTTTCTAATCTGAGTTCAGACCTATCAAATGTAAAGAAAGCTGCTACTATGGATTCCGAAGTTCTCAGCAGTGATGTCTTGAAACTTTCCAAAGGAACTACAAACTTAGCAGAGGTCATGCAGTTAATCGAAAAGGTAGGATCTGATGAAAGCAGTCGGAAATTTACAGAATCAATGAACAACTTTATTAGAATGGCTGAGGAGGAAATTTTGAAAATTCAAGCACACGAAAGTGTTGCTTTGACCCTTGTGAAGGAGATTACAGAATATTTTCATGGAAACTTGGCAAAGGAAGAAGCTCATCCATTCAGAATCTTCTTGGTTGTAAAAGATTTTTTAGCCGTTCTTGACAGGGTCTGCAAAGAAGTTGGTATGGTAAACGAGCGAACTACAGTTAGTTCAGCTAATAAATTCCCTGTTCCGGTTAATCCAATGCTTCCACAACCACTTCCTGGATTACACGGAAGTAAAGATTGTAGTAACTCTTCAGATGATGAATTTTCATCACCTTAG
Protein sequence

>Msa1029530

MQTLFLFLSFLFTIFLEGSHSHKTFIFLNNNRRILHEPFVPLNSLPPSEPPQSPPQPPPLHSPPSTKNPKHPFSTTIPTDNNPTQDPNQNQNQNQNPSPFFPNYPLSSPPPPPSLLAFASFPANISSLILPHTPQPTSHSSNKLLPIALSATAVAVVAVAISVFLYFRRRLHNRRTSTGNKTLRSESSVELFSRNAEPVVDVGGNTSDFLYLGTVVDSRGIDETPPPRGGGSVYRKLESPELRPLPPLARLPEPPSPPPRGDNYSDEEDEEFYSPRGSSLGGRESSGGTESSSRRAFSAVVVNRSNKSSSISCSSSSFGSPEQSHSMSLSPPASSNPRRTQQKSPEASPSHDQHVEYRSSSSSFSSSRSTPERDFDDEKENASLSTNAHASLEERFMEKNENGSLSEQPLRLSNVSSSAFSLPSSPEKTMKMMYQGFDQSPRMSSVSDGSKLPGMSSVPLSPALLSSPETERGGFSCNSNQWGTFSSQRKHWEIPVISKQIASPPPPPPPLPQQRQRKHWEVSRSSAIVYQPRSNLRPPELAPPSRPFVLQNQVTNECVGETEESSKPKLKPLHWDKVRTSSEREMVWDQMNSMSFKLNEEMIETLFVVKTANQKPTDAAPRSVLPLPSQEGRVLDPKKSQNIAILLKALNVTIEGVCEALLEGSSDTLGAELLESLLKMAPSKEEERKLKEHKDDSPTKLDVAEKFLKALLDIPFAFKRVEAMLYMVNFQSEVGYLRKSFQTLEAACEELRNCRMFLKLLEAVLKTGNRMNIGTNRGDAEAFKLDTLLKLADVKGADGKTTLLHFVVQEIIRTEGIRLSGTNQTTSSTLMEDVKCRRLGLQVVSNLSSDLSNVKKAATMDSEVLSSDVLKLSKGTTNLAEVMQLIEKVGSDESSRKFTESMNNFIRMAEEEILKIQAHESVALTLVKEITEYFHGNLAKEEAHPFRIFLVVKDFLAVLDRVCKEVGMVNERTTVSSANKFPVPVNPMLPQPLPGLHGSKDCSNSSDDEFSSP*