AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0094760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0094760 MtrunA17_Chr6g0462901 58.478 1156 349 16 1 1080 1 1101 0.0 1295
Msa0094760 MtrunA17_Chr2g0281381 45.270 1036 434 26 1 990 1 949 0.0 836
Msa0094760 MtrunA17_Chr3g0081981 55.399 639 227 8 483 1077 5 629 0.0 710
Msa0094760 MtrunA17_Chr6g0455001 50.124 403 156 2 631 988 1 403 5.67e-139 426
Msa0094760 MtrunA17_Chr8g0362211 66.450 307 53 3 1 289 1 275 3.42e-129 394
Msa0094760 MtrunA17_Chr8g0373261 32.943 683 397 10 401 1038 274 940 7.32e-116 384
Msa0094760 MtrunA17_Chr6g0477881 30.202 692 408 13 402 1035 277 951 5.12e-100 342
Msa0094760 MtrunA17_Chr6g0477921 30.202 692 408 13 402 1035 277 951 9.20e-100 341
Msa0094760 MtrunA17_Chr2g0303271 55.290 293 73 8 1 292 1 236 2.62e-89 288
Msa0094760 MtrunA17_Chr5g0421581 62.185 238 69 5 1 225 1 230 3.84e-89 286
Msa0094760 MtrunA17_Chr2g0297981 65.263 190 58 3 1 187 1 185 2.12e-73 241
Msa0094760 MtrunA17_Chr1g0190521 25.461 813 477 25 250 991 13 767 1.73e-69 248
Msa0094760 MtrunA17_Chr2g0329971 62.893 159 59 0 524 682 1 159 1.19e-68 229
Msa0094760 MtrunA17_Chr1g0190511 27.422 609 361 14 436 991 82 662 1.20e-67 240
Msa0094760 MtrunA17_Chr4g0049281 25.828 604 362 15 438 988 1 571 1.57e-61 221
Msa0094760 MtrunA17_Chr4g0069321 26.809 608 350 18 442 990 178 749 8.40e-60 219
Msa0094760 MtrunA17_Chr7g0275141 24.437 577 352 13 470 991 47 594 2.59e-54 200
Msa0094760 MtrunA17_Chr1g0176871 78.788 99 21 0 1 99 5 103 4.40e-53 180
Msa0094760 MtrunA17_Chr8g0338951 36.201 279 166 2 721 988 1 278 2.58e-52 186
Msa0094760 MtrunA17_Chr5g0430351 77.083 96 22 0 1 96 1 96 2.77e-51 175
Msa0094760 MtrunA17_Chr8g0338961 37.543 293 164 6 393 682 223 499 2.15e-48 181
Msa0094760 MtrunA17_Chr1g0193171 26.555 595 350 15 445 988 185 743 3.86e-47 181
Msa0094760 MtrunA17_Chr2g0278781 38.462 169 103 1 821 988 6 174 1.37e-36 137
Msa0094760 MtrunA17_Chr1g0171951 34.884 301 163 9 14 282 3 302 8.12e-36 139
Msa0094760 MtrunA17_Chr1g0211111 35.526 228 136 4 796 1014 1 226 2.26e-34 138
Msa0094760 MtrunA17_Chr7g0231781 33.475 236 110 4 549 747 1 226 7.93e-34 130
Msa0094760 MtrunA17_Chr7g0235011 33.591 259 147 4 1 240 122 374 1.19e-32 131
Msa0094760 MtrunA17_Chr5g0404701 34.270 178 116 1 735 912 6 182 1.57e-32 125
Msa0094760 MtrunA17_Chr8g0356631 53.153 111 51 1 5 114 31 141 1.81e-31 125
Msa0094760 MtrunA17_Chr3g0081991 32.759 406 208 17 18 379 23 407 1.44e-30 125
Msa0094760 MtrunA17_Chr4g0027621 44.526 137 71 2 1 134 1 135 6.88e-30 117
Msa0094760 MtrunA17_Chr1g0154181 21.536 599 392 14 446 988 80 656 3.78e-28 122
Msa0094760 MtrunA17_Chr6g0465431 36.207 174 108 3 2 173 22 194 4.82e-28 112
Msa0094760 MtrunA17_Chr6g0480081 38.760 129 79 0 860 988 5 133 7.68e-28 114
Msa0094760 MtrunA17_Chr3g0101791 45.161 124 67 1 12 134 4 127 2.89e-27 109
Msa0094760 MtrunA17_Chr4g0018901 40.602 133 77 1 859 991 243 373 7.61e-26 114
Msa0094760 MtrunA17_Chr4g0049811 35.714 182 98 3 5 181 19 186 5.45e-25 103
Msa0094760 MtrunA17_Chr8g0362121 39.252 107 64 1 1 106 1 107 2.52e-19 85.1
Msa0094760 MtrunA17_Chr7g0232651 38.760 129 67 3 533 660 2 119 1.47e-17 80.5
Msa0094760 MtrunA17_Chr3g0083771 59.211 76 17 2 966 1029 1 74 4.29e-17 77.0
Msa0094760 MtrunA17_Chr2g0303051 35.385 130 48 2 618 711 14 143 4.59e-17 79.3
Msa0094760 MtrunA17_Chr4g0033901 21.811 243 174 4 444 682 53 283 1.60e-14 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0094760 AT3G05850.1 27.393 679 398 24 370 988 127 770 1.03e-54 205
Msa0094760 AT1G06740.1 23.895 611 384 16 432 991 145 725 3.93e-52 196
Msa0094760 AT5G15685.1 24.444 270 185 5 415 682 153 405 2.48e-21 99.4

Find 288 sgRNAs with CRISPR-Local

Find 355 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGTTAAGCTCTACAATTTC+AGG 0.158861 1_2:-78094193 None:intergenic
TCTAGCTTCTTCTTGATATT+TGG 0.184548 1_2:-78096525 None:intergenic
CTTGATGGTTGCTTCCTTAA+GGG 0.207202 1_2:+78095843 Msa0094760:CDS
GCTTGATGGTTGCTTCCTTA+AGG 0.226298 1_2:+78095842 Msa0094760:CDS
CCTGGCTTTGCAGATTGTTT+TGG 0.231455 1_2:-78097569 None:intergenic
TGCTTCCTTAAGGGGCCTTA+TGG 0.233723 1_2:+78095852 Msa0094760:CDS
ATATGCTTCTTTCTTGTAGA+TGG 0.237650 1_2:-78096931 None:intergenic
TCTTAAAATTTCAACTATAA+TGG 0.242590 1_2:+78095518 Msa0094760:CDS
ATAAAATGAAGGATTATAAA+TGG 0.242646 1_2:+78095199 Msa0094760:CDS
AATCACAATGACAGAGTTAA+AGG 0.247572 1_2:-78096391 None:intergenic
TGAGTTTGAGTCTCTGATTC+AGG 0.252292 1_2:-78097212 None:intergenic
TTTGGCTTTGACTTTGGGTT+AGG 0.284690 1_2:+78094631 Msa0094760:CDS
ATTGGAAGTATTTGGTCATT+TGG 0.292275 1_2:-78095906 None:intergenic
CAAATGCAATTGGAAGTATT+TGG 0.293822 1_2:-78095914 None:intergenic
AATGACTTTGGCTTTGACTT+TGG 0.300051 1_2:+78094625 Msa0094760:CDS
GAGCCAAGCTTCTCAGGTTC+AGG 0.300209 1_2:+78097370 Msa0094760:CDS
CTAGGACAAACTATTGCATT+TGG 0.303895 1_2:-78095750 None:intergenic
TGTCTCCAGAACTTGATAAA+TGG 0.304119 1_2:-78096782 None:intergenic
TCTCAGAAGAAGAGTAAAAC+TGG 0.306458 1_2:+78094925 Msa0094760:CDS
ATGGAAGCAATGAGAACTTA+TGG 0.309359 1_2:+78095258 Msa0094760:CDS
AGTGCCCTTGGTGTAGATTT+TGG 0.311143 1_2:+78094691 Msa0094760:CDS
TTTCCATGATGGAGGATATA+AGG 0.317413 1_2:+78096433 Msa0094760:CDS
GTGATCCATTTATCAAGTTC+TGG 0.323695 1_2:+78096777 Msa0094760:CDS
GGGATAGGTGGGGCCATTAT+AGG 0.326161 1_2:-78094229 None:intergenic
ATGACTTTGGCTTTGACTTT+GGG 0.328457 1_2:+78094626 Msa0094760:CDS
TTCTTTCTCCTCTTGTCTCC+TGG 0.329051 1_2:-78097587 None:intergenic
AAAGGAGATGAAGGAAATTA+AGG 0.339624 1_2:+78096254 Msa0094760:CDS
TCATTTGTTTCATTCCTAAC+AGG 0.346592 1_2:-78094253 None:intergenic
GACAGTGAGGTAGGTGGAAT+TGG 0.351602 1_2:+78094751 Msa0094760:CDS
ACTGTGAATGTGGGTGAGCC+TGG 0.352244 1_2:+78094589 Msa0094760:CDS
ATATTGCATATCAGTTTGAT+AGG 0.353343 1_2:+78094137 Msa0094760:CDS
AATCATCTTATACAAATAAC+TGG 0.356241 1_2:+78096553 Msa0094760:CDS
AATTCATTCTCATCAATCAT+TGG 0.356643 1_2:-78094406 None:intergenic
TTCAAATGCAGAAAGATCAT+TGG 0.364591 1_2:+78095819 Msa0094760:CDS
GGAGGTGGAGGTGGAGGTGC+AGG 0.367473 1_2:-78097191 None:intergenic
CAGAGACTGCAGTAGCTGAT+AGG 0.367874 1_2:+78095070 Msa0094760:CDS
TATGATAATGGGCCTGGATT+AGG 0.369826 1_2:+78094439 Msa0094760:CDS
TGGACTAGGTCAATGTTTAA+AGG 0.371517 1_2:+78096327 Msa0094760:CDS
GCAAAATAGCTGAAAACATC+TGG 0.379132 1_2:-78093992 None:intergenic
ACATACATTCTCTGAAATCT+AGG 0.382121 1_2:-78095768 None:intergenic
ATTGATAGAATATCCTATAA+TGG 0.385913 1_2:+78094216 Msa0094760:CDS
CTAGCCCTTATCTTCTTAGT+TGG 0.386193 1_2:-78097524 None:intergenic
AACTATAATGGAAAGGGTTC+AGG 0.387674 1_2:+78095530 Msa0094760:CDS
AGCATTTCTGTATGTAGCTT+TGG 0.388479 1_2:-78096226 None:intergenic
ATTATAGGATATTCTATCAA+TGG 0.390932 1_2:-78094214 None:intergenic
TTGATGAATTCTAGATGGTT+AGG 0.393155 1_2:+78095459 Msa0094760:CDS
GAAACAACTGGCTTGGACCT+TGG 0.399081 1_2:-78096414 None:intergenic
TAATCAGAGCCAAGCTTCTC+AGG 0.400512 1_2:+78097364 Msa0094760:CDS
AATGCTGATGGTGGTGTAAC+TGG 0.400907 1_2:+78094319 Msa0094760:CDS
CCAACAACTGCAAATGCAAT+TGG 0.406103 1_2:-78095924 None:intergenic
ACAGTTTCCTTCTCTAGCTC+AGG 0.407647 1_2:-78094505 None:intergenic
CTATTGCATTTGGGTTCTCT+AGG 0.413316 1_2:-78095740 None:intergenic
TTGGCTTTGACTTTGGGTTA+GGG 0.414490 1_2:+78094632 Msa0094760:CDS
GGAGGTGGAGGTGCAGGCAG+TGG 0.416374 1_2:-78097185 None:intergenic
TAGGACAAACTATTGCATTT+GGG 0.416765 1_2:-78095749 None:intergenic
GAGTGTGTCCTACATTATGC+TGG 0.419162 1_2:+78093908 Msa0094760:CDS
TCACAGTCAAGTACTTCTTC+TGG 0.422370 1_2:-78093968 None:intergenic
TCAGCCTCAGTACCTTCATA+TGG 0.422947 1_2:-78095717 None:intergenic
GAGGTGGAGGTGCAGGCAGT+GGG 0.425991 1_2:-78097184 None:intergenic
TCCTAACAGGTGGGATAGGT+GGG 0.426973 1_2:-78094240 None:intergenic
AACTAGGAAGCGAAAGGTTA+AGG 0.427310 1_2:+78097445 Msa0094760:CDS
GGAGAAGTGGAATATTCAAA+TGG 0.427600 1_2:+78095551 Msa0094760:CDS
GAAGCAGAGGTGGGAATAGC+AGG 0.429073 1_2:+78094721 Msa0094760:CDS
TCAAATGCAGAAAGATCATT+GGG 0.430563 1_2:+78095820 Msa0094760:CDS
TTTGATCCTGCTATGGAAGA+TGG 0.432188 1_2:+78094070 Msa0094760:CDS
TGCAGAGGTGGGAGAAGAAT+AGG 0.434665 1_2:+78096466 Msa0094760:CDS
ATGCTCCAACTAAGAAGATA+AGG 0.434883 1_2:+78097519 Msa0094760:CDS
AAGAGTGAGGGTTGGATGCA+AGG 0.436636 1_2:+78095326 Msa0094760:CDS
ATTCATTCTCATCAATCATT+GGG 0.439176 1_2:-78094405 None:intergenic
GTGAGGGTTGGATGCAAGGA+AGG 0.439331 1_2:+78095330 Msa0094760:CDS
CTAGGGAATGAAAATGACTT+TGG 0.439593 1_2:+78094613 Msa0094760:CDS
TAAAATGAAGGATTATAAAT+GGG 0.439876 1_2:+78095200 Msa0094760:CDS
AGGTCCCACTGCTGAGGGTG+AGG 0.448663 1_2:+78094291 Msa0094760:CDS
TTCCACCATAAGGCCCCTTA+AGG 0.453815 1_2:-78095857 None:intergenic
GATTCAGGAGGTGGAGGTGG+AGG 0.454760 1_2:-78097197 None:intergenic
ATGTCACACTCATGATCTCC+AGG 0.457257 1_2:-78095420 None:intergenic
TTGGTTGGTGAGTATGATAA+TGG 0.458161 1_2:+78094427 Msa0094760:CDS
AATGATTGATGAGAATGAAT+TGG 0.461256 1_2:+78094408 Msa0094760:CDS
TGAAGGATCTGTGAGGGTAG+AGG 0.461996 1_2:+78094852 Msa0094760:CDS
TTATAGGATATTCTATCAAT+GGG 0.462408 1_2:-78094213 None:intergenic
ATACAAATAACTGGATAGTA+AGG 0.464369 1_2:+78096562 Msa0094760:CDS
AGAAAGATCATTGGGCTTGA+TGG 0.464573 1_2:+78095828 Msa0094760:CDS
AGGGAATGAAAATGAGGATC+TGG 0.464724 1_2:+78094651 Msa0094760:CDS
TGCAGGAAATGGTACTTGAC+AGG 0.467185 1_2:+78096840 Msa0094760:CDS
TCCTCCATCATGGAAACAAC+TGG 0.468536 1_2:-78096426 None:intergenic
AATTTCAACTATAATGGAAA+GGG 0.470850 1_2:+78095524 Msa0094760:CDS
ATACAGAAATGCTTGGGAAA+AGG 0.471617 1_2:+78096236 Msa0094760:CDS
GAAGGATCTGTGAGGGTAGA+GGG 0.474250 1_2:+78094853 Msa0094760:CDS
CCCCACCTATCCCACCTGTT+AGG 0.474859 1_2:+78094239 Msa0094760:CDS
AGCTACATACAGAAATGCTT+GGG 0.475989 1_2:+78096230 Msa0094760:CDS
AGGAGACAAGAGGAGAAAGA+AGG 0.477177 1_2:+78097589 Msa0094760:CDS
AGAGACTGCAGTAGCTGATA+GGG 0.477499 1_2:+78095071 Msa0094760:CDS
AATGTGGGTGAGCCTGGGCT+AGG 0.477801 1_2:+78094595 Msa0094760:CDS
AAGGATTATAAATGGGAGGT+TGG 0.478255 1_2:+78095207 Msa0094760:CDS
TGCTCCAACTAAGAAGATAA+GGG 0.478396 1_2:+78097520 Msa0094760:CDS
TGCTTGGGAAAAGGAGATGA+AGG 0.478933 1_2:+78096245 Msa0094760:CDS
TGAGTTTGATGAATTCTAGA+TGG 0.479130 1_2:+78095454 Msa0094760:CDS
TTGATGGTTGCTTCCTTAAG+GGG 0.481131 1_2:+78095844 Msa0094760:CDS
ACACTTCTAACAAGGGGAAA+AGG 0.482288 1_2:+78094884 Msa0094760:CDS
TATGCAGTGGAATTTGTTGA+AGG 0.482328 1_2:+78095603 Msa0094760:CDS
TCTGATTCAGGAGGTGGAGG+TGG 0.482726 1_2:-78097200 None:intergenic
AATTCTGATGACTTGAATAG+TGG 0.484461 1_2:+78095117 Msa0094760:CDS
TTTAGTGACCCTGAGTATGT+AGG 0.485142 1_2:+78093944 Msa0094760:CDS
ACATTCACAGTTTCTTCCAC+TGG 0.487456 1_2:-78094544 None:intergenic
CATCATGGAAACAACTGGCT+TGG 0.487845 1_2:-78096421 None:intergenic
TGGATCTATTTCACACAGAT+AGG 0.490360 1_2:-78096298 None:intergenic
TTCCTAACAGGTGGGATAGG+TGG 0.490826 1_2:-78094241 None:intergenic
AGTGAGCTTCTCAGAGATAG+TGG 0.491169 1_2:+78097089 Msa0094760:CDS
TACAATTTCAGGTTGTGACA+TGG 0.491654 1_2:-78094182 None:intergenic
AACTTGATAAATGGATCACT+TGG 0.491670 1_2:-78096773 None:intergenic
TGGGGTGAACAGCATACAAA+TGG 0.492307 1_2:-78094162 None:intergenic
GCTAGCAACATTCCACCATA+AGG 0.492894 1_2:-78095867 None:intergenic
AGAATGATAAAGAAAGAGTG+AGG 0.493373 1_2:+78095313 Msa0094760:CDS
GTCTCTGATTCAGGAGGTGG+AGG 0.493494 1_2:-78097203 None:intergenic
CAAAATGCCAGATAAAATGA+AGG 0.493800 1_2:+78095188 Msa0094760:CDS
CAGCCTCAGTACCTTCATAT+GGG 0.494295 1_2:-78095716 None:intergenic
ATAGTGACATAGGGTGTAGA+AGG 0.496317 1_2:+78094107 Msa0094760:CDS
GGTGAGTATGATAATGGGCC+TGG 0.496335 1_2:+78094433 Msa0094760:CDS
TCATTCCTAACAGGTGGGAT+AGG 0.496684 1_2:-78094244 None:intergenic
CAAATGAAGAGAGCATCATA+TGG 0.498588 1_2:+78097113 Msa0094760:CDS
GAAGTTTGTGACTGAGTAGC+TGG 0.500286 1_2:-78097470 None:intergenic
GCTTCTTTCTTGTAGATGGA+TGG 0.501816 1_2:-78096927 None:intergenic
TGAGTCTCTGATTCAGGAGG+TGG 0.503198 1_2:-78097206 None:intergenic
ACCATTCCATCTTCCATAGC+AGG 0.503588 1_2:-78094076 None:intergenic
CAAAAGCTCTGCTCAACCTC+AGG 0.504401 1_2:-78096129 None:intergenic
GATGAGACACAGACTGAAGT+TGG 0.504679 1_2:+78094466 Msa0094760:CDS
GTCTCATCATCTCCTAATCC+AGG 0.506310 1_2:-78094451 None:intergenic
CAAGCCAGTTGTTTCCATGA+TGG 0.506531 1_2:+78096422 Msa0094760:CDS
TGGAAAGGGTTCAGGAGAAG+TGG 0.510298 1_2:+78095538 Msa0094760:CDS
AGAGACATGGCAGTTGAGAA+AGG 0.510664 1_2:+78095392 Msa0094760:CDS
TAAATTGCCTAATACTACAT+TGG 0.511395 1_2:-78097629 None:intergenic
TATCAAGAAGAAGCTAGAAA+AGG 0.512265 1_2:+78096530 Msa0094760:CDS
AAGCTACATACAGAAATGCT+TGG 0.513838 1_2:+78096229 Msa0094760:CDS
AAAATTACAAGGTTTGATGA+TGG 0.513906 1_2:+78096492 Msa0094760:CDS
GGAGACAAGAGGAGAAAGAA+GGG 0.515327 1_2:+78097590 Msa0094760:CDS
ACATTCACAGTTTCCTCCAC+TGG 0.519050 1_2:-78094577 None:intergenic
ATTATGCTCATGAATTACTA+AGG 0.519878 1_2:+78095658 Msa0094760:CDS
GTAGCTTTGAATAGTGACAT+AGG 0.520744 1_2:+78094097 Msa0094760:CDS
AGCCAAGCTTCTCAGGTTCA+GGG 0.521507 1_2:+78097371 Msa0094760:CDS
ATTGACCTAGTCCAATGTCT+TGG 0.521867 1_2:-78096318 None:intergenic
ACTCTGTCATTGTGATTCCA+AGG 0.523097 1_2:+78096397 Msa0094760:CDS
AAATTTCAACTATAATGGAA+AGG 0.523398 1_2:+78095523 Msa0094760:CDS
TTCCTTAAGGGGCCTTATGG+TGG 0.525453 1_2:+78095855 Msa0094760:CDS
GGAAGCAACAAATCAATAGC+TGG 0.527319 1_2:-78096108 None:intergenic
ACAATTTCAGGTTGTGACAT+GGG 0.528351 1_2:-78094181 None:intergenic
GAGAAGTGGAATATTCAAAT+GGG 0.529181 1_2:+78095552 Msa0094760:CDS
TCTTCTGGACCTACATACTC+AGG 0.529918 1_2:-78093953 None:intergenic
TTTGTTTCATTCCTAACAGG+TGG 0.530227 1_2:-78094250 None:intergenic
TGGTCATTTAAGTCCACCTC+AGG 0.531490 1_2:-78094379 None:intergenic
TAACAAGGGGAAAAGGAAGA+AGG 0.531664 1_2:+78094891 Msa0094760:CDS
AGTGTGTCCTACATTATGCT+GGG 0.532686 1_2:+78093909 Msa0094760:CDS
AACTGCCATGTCTCTTCACC+AGG 0.533406 1_2:-78095384 None:intergenic
AATCCTTATATCCTCCATCA+TGG 0.534274 1_2:-78096436 None:intergenic
GGTCCCACTGCTGAGGGTGA+GGG 0.535123 1_2:+78094292 Msa0094760:CDS
ATGGACAAAATCTGTGGATG+AGG 0.536562 1_2:+78096988 Msa0094760:CDS
TAGTGTAGGTCCCACTGCTG+AGG 0.536905 1_2:+78094285 Msa0094760:CDS
TGGGTTAGGGAATGAAAATG+AGG 0.537603 1_2:+78094645 Msa0094760:CDS
GATAGCTGGTGGTTGAAGAT+CGG 0.537738 1_2:-78097021 None:intergenic
TGAGGATCTGGCTGGTGAGA+AGG 0.539286 1_2:+78094663 Msa0094760:CDS
TGGTGTGTGACTGCAGGAAA+TGG 0.547418 1_2:+78096829 Msa0094760:CDS
TATTGATTTGTTGCTTCCTG+AGG 0.547901 1_2:+78096113 Msa0094760:CDS
GGATTTATGTCATGCAGAGG+TGG 0.548528 1_2:+78096454 Msa0094760:CDS
GATGGTGGTGTAACTGGTGT+AGG 0.549726 1_2:+78094325 Msa0094760:CDS
GATAAAGAAAGAGTGAGGGT+TGG 0.551115 1_2:+78095318 Msa0094760:CDS
GAAGTTGGACAAAATAGTCA+TGG 0.551663 1_2:+78094481 Msa0094760:CDS
CCAAAACAATCTGCAAAGCC+AGG 0.552811 1_2:+78097569 Msa0094760:CDS
AAGAAGAGTAAAACTGGGAA+GGG 0.555197 1_2:+78094931 Msa0094760:CDS
CTCAGAAGAAGAGTAAAACT+GGG 0.556689 1_2:+78094926 Msa0094760:CDS
TGGTGAGTCAGAAGCAGAGG+TGG 0.557655 1_2:+78094711 Msa0094760:CDS
GGAAATTAAGGCTATAAGTG+AGG 0.557790 1_2:+78096266 Msa0094760:CDS
TACCCTGAACCTGAGAAGCT+TGG 0.560959 1_2:-78097373 None:intergenic
GACAAGAGGAGAAAGAAGGG+AGG 0.562572 1_2:+78097593 Msa0094760:CDS
ATGTGGGTGAGCCTGGGCTA+GGG 0.564257 1_2:+78094596 Msa0094760:CDS
TGGTTGGTGAGTATGATAAT+GGG 0.565236 1_2:+78094428 Msa0094760:CDS
GCATTCTGTGCTAAAATACC+TGG 0.568022 1_2:+78095366 Msa0094760:CDS
CTGTGAATGTGGGTGAGCCT+GGG 0.570195 1_2:+78094590 Msa0094760:CDS
GGAATGTTGCTAGCTGCCAT+TGG 0.570690 1_2:+78095876 Msa0094760:CDS
ATTACATCAACCCCATATGA+AGG 0.571625 1_2:+78095705 Msa0094760:CDS
GATGCAAGGAAGGATGTCCA+TGG 0.571755 1_2:+78095340 Msa0094760:CDS
TAGGTGCTAAACTTCATGCA+AGG 0.572057 1_2:+78095478 Msa0094760:CDS
GTCATTTGGATCCATTCCAA+TGG 0.573952 1_2:-78095892 None:intergenic
AGGTGGAATTGGAGTTGATG+TGG 0.574739 1_2:+78094762 Msa0094760:CDS
GTGAAATAGATCCAAGACAT+TGG 0.574774 1_2:+78096307 Msa0094760:CDS
GATTTATGTCATGCAGAGGT+GGG 0.575651 1_2:+78096455 Msa0094760:CDS
TATTGCATATCAGTTTGATA+GGG 0.577424 1_2:+78094138 Msa0094760:CDS
TAGATCCAAGACATTGGACT+AGG 0.580081 1_2:+78096313 Msa0094760:CDS
TTAAGTCCCCAGCATAATGT+AGG 0.580546 1_2:-78093916 None:intergenic
GTTGCTAGCTGCCATTGGAA+TGG 0.580980 1_2:+78095881 Msa0094760:CDS
AATGAAAGTCCCACTAGTGT+AGG 0.581475 1_2:+78094271 Msa0094760:CDS
AGCAGATGGTGTGTGACTGC+AGG 0.581654 1_2:+78096823 Msa0094760:CDS
GTAATCTTGACAGTTGAATG+AGG 0.581887 1_2:-78095687 None:intergenic
AGAACTTATGGAGTACACTC+TGG 0.582498 1_2:+78095270 Msa0094760:CDS
GAGAAGGAAGACAGTGCCCT+TGG 0.582909 1_2:+78094679 Msa0094760:CDS
GCCAGTTGTTTCCATGATGG+AGG 0.583845 1_2:+78096425 Msa0094760:CDS
CTTATGGAGTACACTCTGGA+AGG 0.584197 1_2:+78095274 Msa0094760:CDS
AGTGTAGGTCCCACTGCTGA+GGG 0.584283 1_2:+78094286 Msa0094760:CDS
TGCTGTTAACTTGCAGCAGA+TGG 0.585236 1_2:+78096809 Msa0094760:CDS
CAATTTCAGGTTGTGACATG+GGG 0.585319 1_2:-78094180 None:intergenic
GGAGACTTAGACAGTGAGGT+AGG 0.591116 1_2:+78094742 Msa0094760:CDS
TCCTGCTATGGAAGATGGAA+TGG 0.591475 1_2:+78094075 Msa0094760:CDS
CAAGCAATGGCATGACAGCA+TGG 0.592168 1_2:-78096867 None:intergenic
TTGTTTCATTCCTAACAGGT+GGG 0.592857 1_2:-78094249 None:intergenic
TAGCTTTGAATAGTGACATA+GGG 0.594139 1_2:+78094098 Msa0094760:CDS
AGCCTCAGTACCTTCATATG+GGG 0.594389 1_2:-78095715 None:intergenic
GAGGGTTCAAATGCTGATGG+TGG 0.595119 1_2:+78094310 Msa0094760:CDS
GAAGAAGAGTAAAACTGGGA+AGG 0.595446 1_2:+78094930 Msa0094760:CDS
AGCATGATATATCCTGCCAA+TGG 0.595708 1_2:+78096969 Msa0094760:CDS
GTTTGAGTCTCTGATTCAGG+AGG 0.595918 1_2:-78097209 None:intergenic
TAAAGATAACACTTCTAACA+AGG 0.597579 1_2:+78094876 Msa0094760:CDS
ATTGATGAGAATGAATTGGT+TGG 0.602699 1_2:+78094412 Msa0094760:CDS
TAATCTTGACAGTTGAATGA+GGG 0.604215 1_2:-78095686 None:intergenic
AGGTGCTAAACTTCATGCAA+GGG 0.605644 1_2:+78095479 Msa0094760:CDS
AGAATAGGCAGAAAATTACA+AGG 0.607332 1_2:+78096481 Msa0094760:CDS
TTAGCACAGAATGCCTCCCA+TGG 0.607968 1_2:-78095357 None:intergenic
CAGTTGAGAAAGGTTTACCC+TGG 0.608311 1_2:+78095402 Msa0094760:CDS
GGTGAGTCAGAAGCAGAGGT+GGG 0.609791 1_2:+78094712 Msa0094760:CDS
TCTCATCAATCATTGGGCCA+TGG 0.611466 1_2:-78094399 None:intergenic
CATATGGAATCAAATGCAGT+AGG 0.612227 1_2:+78097129 Msa0094760:CDS
ATGCAGTGGAATTTGTTGAA+GGG 0.612380 1_2:+78095604 Msa0094760:CDS
GGTGAGGGTTCAAATGCTGA+TGG 0.614922 1_2:+78094307 Msa0094760:CDS
AACAAGGGGAAAAGGAAGAA+GGG 0.615075 1_2:+78094892 Msa0094760:CDS
ACATGCTGATGGGCCTGAGG+TGG 0.615733 1_2:+78094366 Msa0094760:CDS
TTATGGAGTACACTCTGGAA+GGG 0.615762 1_2:+78095275 Msa0094760:CDS
AGTGGAAGAAACTGTGAATG+TGG 0.618036 1_2:+78094546 Msa0094760:CDS
AGAAACTGTGAATGTGGGTG+AGG 0.618668 1_2:+78094552 Msa0094760:CDS
TGAACCCTCACCCTCAGCAG+TGG 0.618681 1_2:-78094296 None:intergenic
GAATGATAAAGAAAGAGTGA+GGG 0.618702 1_2:+78095314 Msa0094760:CDS
AGAAGAGTAAAACTGGGAAG+GGG 0.619014 1_2:+78094932 Msa0094760:CDS
GAACCCTCACCCTCAGCAGT+GGG 0.619167 1_2:-78094295 None:intergenic
GCAGTGGGACCTACACTAGT+GGG 0.619473 1_2:-78094280 None:intergenic
CCTAACAGGTGGGATAGGTG+GGG 0.619957 1_2:-78094239 None:intergenic
ATAATGTCATCTTCAAACAC+AGG 0.619975 1_2:-78095000 None:intergenic
AGTGGAGGAAACTGTGAATG+TGG 0.620332 1_2:+78094579 Msa0094760:CDS
AGCATCAACTAGGAAGCGAA+AGG 0.620589 1_2:+78097439 Msa0094760:CDS
ATGTTAGACTGAAGTCCTTG+TGG 0.620684 1_2:+78094044 Msa0094760:CDS
AATGAAGGATTATAAATGGG+AGG 0.620839 1_2:+78095203 Msa0094760:CDS
AGCAGTGGGACCTACACTAG+TGG 0.621145 1_2:-78094281 None:intergenic
AAATACCTGGTGAAGAGACA+TGG 0.623282 1_2:+78095379 Msa0094760:CDS
AAGTTGGACAAAATAGTCAT+GGG 0.623438 1_2:+78094482 Msa0094760:CDS
TGTTGTGAATCAAACTGAAG+TGG 0.623562 1_2:+78094828 Msa0094760:CDS
GTTGAGTGTACACATGCTGA+TGG 0.623920 1_2:+78094355 Msa0094760:CDS
CTGCAAAGCCAGGAGACAAG+AGG 0.627386 1_2:+78097579 Msa0094760:CDS
AAAGATAACACTTCTAACAA+GGG 0.628502 1_2:+78094877 Msa0094760:CDS
AAGATAACACTTCTAACAAG+GGG 0.630377 1_2:+78094878 Msa0094760:CDS
TTGAGTGTACACATGCTGAT+GGG 0.630401 1_2:+78094356 Msa0094760:CDS
TCATGGGCCTGAGCTAGAGA+AGG 0.630984 1_2:+78094498 Msa0094760:CDS
TGTGGGTGAGGCACCAGTGG+AGG 0.631555 1_2:+78094564 Msa0094760:CDS
GAATGTGGGTGAGGCACCAG+TGG 0.632214 1_2:+78094561 Msa0094760:CDS
GTAGGACACACTCAAACACT+TGG 0.632968 1_2:-78093898 None:intergenic
GACTTAGACAGTGAGGTAGG+TGG 0.634372 1_2:+78094745 Msa0094760:CDS
AATTAAGGCTATAAGTGAGG+AGG 0.641286 1_2:+78096269 Msa0094760:CDS
GAGGTGGACTTAAATGACCA+TGG 0.643375 1_2:+78094382 Msa0094760:CDS
CTGCCAATGGACAAAATCTG+TGG 0.643535 1_2:+78096982 Msa0094760:CDS
TAGAGCAAAGAAGTATGCAG+TGG 0.643559 1_2:+78095590 Msa0094760:CDS
AGTGGAATATTCAAATGGGT+AGG 0.643789 1_2:+78095556 Msa0094760:CDS
ATGCAAGGAAGGATGTCCAT+GGG 0.645295 1_2:+78095341 Msa0094760:CDS
TAGTGGATCTGAGAGTGATG+AGG 0.646648 1_2:+78095134 Msa0094760:CDS
CTCACCAAAATCTACACCAA+GGG 0.646818 1_2:-78094695 None:intergenic
AATGAAAATGAGGATCTGGC+TGG 0.646878 1_2:+78094655 Msa0094760:CDS
AATCAAACTGAAGTGGGTGA+AGG 0.647438 1_2:+78094835 Msa0094760:CDS
TACACATGCTGATGGGCCTG+AGG 0.649535 1_2:+78094363 Msa0094760:CDS
TGCAGTAGGTGCAAGCAATG+TGG 0.650916 1_2:+78097143 Msa0094760:CDS
AATTCATCAAACTCACATTG+TGG 0.651741 1_2:-78095446 None:intergenic
AGCAGGAGACTTAGACAGTG+AGG 0.654339 1_2:+78094738 Msa0094760:CDS
TAAGGATTTATGTCATGCAG+AGG 0.655039 1_2:+78096451 Msa0094760:CDS
GAGACTGCAGTAGCTGATAG+GGG 0.655683 1_2:+78095072 Msa0094760:CDS
GGATCTGAGAGTGATGAGGA+TGG 0.657110 1_2:+78095138 Msa0094760:CDS
GCATGTGTACACTCAACAGT+GGG 0.657460 1_2:-78094349 None:intergenic
GCAGGAAATGGTACTTGACA+GGG 0.662031 1_2:+78096841 Msa0094760:CDS
CTTCTGGACCTACATACTCA+GGG 0.664863 1_2:-78093952 None:intergenic
GTTGTGAATCAAACTGAAGT+GGG 0.672017 1_2:+78094829 Msa0094760:CDS
TGTCACACTCATGATCTCCA+GGG 0.676323 1_2:-78095419 None:intergenic
CAAGGAAGGATGTCCATGGG+AGG 0.676871 1_2:+78095344 Msa0094760:CDS
GAATGTGAGTGAGACACCAG+TGG 0.689451 1_2:+78094528 Msa0094760:CDS
AGCATGTGTACACTCAACAG+TGG 0.691406 1_2:-78094350 None:intergenic
AGCAGGATCAAAATACCACA+AGG 0.694662 1_2:-78094059 None:intergenic
ACTCACCAAAATCTACACCA+AGG 0.695544 1_2:-78094696 None:intergenic
AAGGGGAAAAGGAAGAAGGG+AGG 0.696338 1_2:+78094895 Msa0094760:CDS
AACCCCATATGAAGGTACTG+AGG 0.699196 1_2:+78095713 Msa0094760:CDS
GTGTGTCCTACATTATGCTG+GGG 0.701457 1_2:+78093910 Msa0094760:CDS
TGTTGAGACAGAGACTGAAG+TGG 0.701597 1_2:+78094792 Msa0094760:CDS
ACATTATTGAGCAATTACAA+AGG 0.704856 1_2:+78095016 Msa0094760:CDS
GTGGAAGAAACTGTGAATGT+GGG 0.705644 1_2:+78094547 Msa0094760:CDS
GTGGAGGAAACTGTGAATGT+GGG 0.707940 1_2:+78094580 Msa0094760:CDS
GCTTTAGAGATCAATACACA+AGG 0.734365 1_2:+78095628 Msa0094760:CDS
AGTGGGTGAAGGATCTGTGA+GGG 0.739409 1_2:+78094846 Msa0094760:CDS
GTTGAGACAGAGACTGAAGT+GGG 0.744646 1_2:+78094793 Msa0094760:CDS
AAGTGGGTGAAGGATCTGTG+AGG 0.773976 1_2:+78094845 Msa0094760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATGAAGGATTATAAA+TGG + chr1_2:78095199-78095218 Msa0094760:CDS 15.0%
!! TAAAATGAAGGATTATAAAT+GGG + chr1_2:78095200-78095219 Msa0094760:CDS 15.0%
!! TCTTAAAATTTCAACTATAA+TGG + chr1_2:78095518-78095537 Msa0094760:CDS 15.0%
!! ATATTTAATCAACATACAAA+TGG - chr1_2:78096661-78096680 None:intergenic 15.0%
!!! AATATTTTGTATTAAGTTTC+TGG + chr1_2:78096676-78096695 Msa0094760:intron 15.0%
!!! AACATAACCTAATCTTTTTA+AGG - chr1_2:78094029-78094048 None:intergenic 20.0%
!! TTATAGGATATTCTATCAAT+GGG - chr1_2:78094216-78094235 None:intergenic 20.0%
!! ATTATAGGATATTCTATCAA+TGG - chr1_2:78094217-78094236 None:intergenic 20.0%
!! ATTGATAGAATATCCTATAA+TGG + chr1_2:78094216-78094235 Msa0094760:CDS 20.0%
!!! TTATAATCCTTCATTTTATC+TGG - chr1_2:78095198-78095217 None:intergenic 20.0%
!!! AAATTTCAACTATAATGGAA+AGG + chr1_2:78095523-78095542 Msa0094760:CDS 20.0%
!!! AATTTCAACTATAATGGAAA+GGG + chr1_2:78095524-78095543 Msa0094760:CDS 20.0%
!!! AGAATGTATGTATGTTTTAA+GGG + chr1_2:78095780-78095799 Msa0094760:CDS 20.0%
!!! TTTGTTGTATTGTATCTATT+AGG + chr1_2:78096077-78096096 Msa0094760:intron 20.0%
!! TTGTTGTATTGTATCTATTA+GGG + chr1_2:78096078-78096097 Msa0094760:intron 20.0%
!! AAAAACTAAAAGAGTTAATG+TGG + chr1_2:78096196-78096215 Msa0094760:CDS 20.0%
!! AATCATCTTATACAAATAAC+TGG + chr1_2:78096553-78096572 Msa0094760:CDS 20.0%
!!! AGGTATTAATTTTCATTTGT+AGG + chr1_2:78096582-78096601 Msa0094760:intron 20.0%
! TTAGCAACCTTAAAAAGATT+AGG + chr1_2:78094019-78094038 Msa0094760:CDS 25.0%
! ATATTGCATATCAGTTTGAT+AGG + chr1_2:78094137-78094156 Msa0094760:CDS 25.0%
! TATTGCATATCAGTTTGATA+GGG + chr1_2:78094138-78094157 Msa0094760:CDS 25.0%
! ATTCATTCTCATCAATCATT+GGG - chr1_2:78094408-78094427 None:intergenic 25.0%
! AATTCATTCTCATCAATCAT+TGG - chr1_2:78094409-78094428 None:intergenic 25.0%
! AATGATTGATGAGAATGAAT+TGG + chr1_2:78094408-78094427 Msa0094760:CDS 25.0%
! TAAAGATAACACTTCTAACA+AGG + chr1_2:78094876-78094895 Msa0094760:CDS 25.0%
! AAAGATAACACTTCTAACAA+GGG + chr1_2:78094877-78094896 Msa0094760:CDS 25.0%
! ACATTATTGAGCAATTACAA+AGG + chr1_2:78095016-78095035 Msa0094760:CDS 25.0%
!!! TGAGTCAAAGTTAGTTTTTA+TGG + chr1_2:78095239-78095258 Msa0094760:CDS 25.0%
! ATTATGCTCATGAATTACTA+AGG + chr1_2:78095658-78095677 Msa0094760:CDS 25.0%
!! GAGAATGTATGTATGTTTTA+AGG + chr1_2:78095779-78095798 Msa0094760:CDS 25.0%
!!! GAATGTATGTATGTTTTAAG+GGG + chr1_2:78095781-78095800 Msa0094760:CDS 25.0%
!!! AATTTTAGAAAGAGATTTCC+TGG + chr1_2:78096171-78096190 Msa0094760:CDS 25.0%
!!! AACTCTTTTAGTTTTTTACC+AGG - chr1_2:78096192-78096211 None:intergenic 25.0%
! AAAATTACAAGGTTTGATGA+TGG + chr1_2:78096492-78096511 Msa0094760:CDS 25.0%
! ATACAAATAACTGGATAGTA+AGG + chr1_2:78096562-78096581 Msa0094760:CDS 25.0%
! TTCATTATGCATTAAGTTTC+TGG + chr1_2:78096701-78096720 Msa0094760:intron 25.0%
! ACCTAAAAAGAAAAGAAGAT+TGG + chr1_2:78097061-78097080 Msa0094760:CDS 25.0%
!! TCCAATCTTCTTTTCTTTTT+AGG - chr1_2:78097065-78097084 None:intergenic 25.0%
!! TAGCTTTGAATAGTGACATA+GGG + chr1_2:78094098-78094117 Msa0094760:CDS 30.0%
TCATTTGTTTCATTCCTAAC+AGG - chr1_2:78094256-78094275 None:intergenic 30.0%
ATTGATGAGAATGAATTGGT+TGG + chr1_2:78094412-78094431 Msa0094760:CDS 30.0%
AAGTTGGACAAAATAGTCAT+GGG + chr1_2:78094482-78094501 Msa0094760:CDS 30.0%
AAGATAACACTTCTAACAAG+GGG + chr1_2:78094878-78094897 Msa0094760:CDS 30.0%
!!! TTTCCTGGTTGTTTTTTCTT+GGG - chr1_2:78094976-78094995 None:intergenic 30.0%
!!! TTTTCCTGGTTGTTTTTTCT+TGG - chr1_2:78094977-78094996 None:intergenic 30.0%
ATAATGTCATCTTCAAACAC+AGG - chr1_2:78095003-78095022 None:intergenic 30.0%
AATTCTGATGACTTGAATAG+TGG + chr1_2:78095117-78095136 Msa0094760:CDS 30.0%
!! CATTTTGAAAGTTGGGAATT+TGG - chr1_2:78095175-78095194 None:intergenic 30.0%
!! TATCTGGCATTTTGAAAGTT+GGG - chr1_2:78095182-78095201 None:intergenic 30.0%
!! TTATCTGGCATTTTGAAAGT+TGG - chr1_2:78095183-78095202 None:intergenic 30.0%
CAAAATGCCAGATAAAATGA+AGG + chr1_2:78095188-78095207 Msa0094760:CDS 30.0%
AATGAAGGATTATAAATGGG+AGG + chr1_2:78095203-78095222 Msa0094760:CDS 30.0%
AGAATGATAAAGAAAGAGTG+AGG + chr1_2:78095313-78095332 Msa0094760:CDS 30.0%
GAATGATAAAGAAAGAGTGA+GGG + chr1_2:78095314-78095333 Msa0094760:CDS 30.0%
AATTCATCAAACTCACATTG+TGG - chr1_2:78095449-78095468 None:intergenic 30.0%
TGAGTTTGATGAATTCTAGA+TGG + chr1_2:78095454-78095473 Msa0094760:CDS 30.0%
TTGATGAATTCTAGATGGTT+AGG + chr1_2:78095459-78095478 Msa0094760:CDS 30.0%
GAGAAGTGGAATATTCAAAT+GGG + chr1_2:78095552-78095571 Msa0094760:CDS 30.0%
TAATCTTGACAGTTGAATGA+GGG - chr1_2:78095689-78095708 None:intergenic 30.0%
TAGGACAAACTATTGCATTT+GGG - chr1_2:78095752-78095771 None:intergenic 30.0%
!! ACATACATTCTCTGAAATCT+AGG - chr1_2:78095771-78095790 None:intergenic 30.0%
TTCAAATGCAGAAAGATCAT+TGG + chr1_2:78095819-78095838 Msa0094760:CDS 30.0%
TCAAATGCAGAAAGATCATT+GGG + chr1_2:78095820-78095839 Msa0094760:CDS 30.0%
!! ATTGGAAGTATTTGGTCATT+TGG - chr1_2:78095909-78095928 None:intergenic 30.0%
!! CAAATGCAATTGGAAGTATT+TGG - chr1_2:78095917-78095936 None:intergenic 30.0%
!! ATACATTTTGTTTATGCCTC+TGG + chr1_2:78096032-78096051 Msa0094760:intron 30.0%
TCAGAAATTACTATAACCAG+AGG - chr1_2:78096051-78096070 None:intergenic 30.0%
AAAGGAGATGAAGGAAATTA+AGG + chr1_2:78096254-78096273 Msa0094760:CDS 30.0%
AATCACAATGACAGAGTTAA+AGG - chr1_2:78096394-78096413 None:intergenic 30.0%
AGAATAGGCAGAAAATTACA+AGG + chr1_2:78096481-78096500 Msa0094760:CDS 30.0%
! TCTAGCTTCTTCTTGATATT+TGG - chr1_2:78096528-78096547 None:intergenic 30.0%
TATCAAGAAGAAGCTAGAAA+AGG + chr1_2:78096530-78096549 Msa0094760:CDS 30.0%
AAGAAAATAAACCAGAAACC+AGG - chr1_2:78096730-78096749 None:intergenic 30.0%
!!! GGTTTCTGGTTTATTTTCTT+AGG + chr1_2:78096730-78096749 Msa0094760:intron 30.0%
!! TTTATTTTCTTAGGCAAGGT+GGG + chr1_2:78096739-78096758 Msa0094760:intron 30.0%
AACTTGATAAATGGATCACT+TGG - chr1_2:78096776-78096795 None:intergenic 30.0%
! TTTGTGTTTTATGCAAGCAA+TGG - chr1_2:78096883-78096902 None:intergenic 30.0%
ATATGCTTCTTTCTTGTAGA+TGG - chr1_2:78096934-78096953 None:intergenic 30.0%
GCAAAATAGCTGAAAACATC+TGG - chr1_2:78093995-78094014 None:intergenic 35.0%
!! GTAGCTTTGAATAGTGACAT+AGG + chr1_2:78094097-78094116 Msa0094760:CDS 35.0%
!! ACAATTTCAGGTTGTGACAT+GGG - chr1_2:78094184-78094203 None:intergenic 35.0%
!! TACAATTTCAGGTTGTGACA+TGG - chr1_2:78094185-78094204 None:intergenic 35.0%
TTGTTTCATTCCTAACAGGT+GGG - chr1_2:78094252-78094271 None:intergenic 35.0%
TTTGTTTCATTCCTAACAGG+TGG - chr1_2:78094253-78094272 None:intergenic 35.0%
!! TTGGTTGGTGAGTATGATAA+TGG + chr1_2:78094427-78094446 Msa0094760:CDS 35.0%
!! TGGTTGGTGAGTATGATAAT+GGG + chr1_2:78094428-78094447 Msa0094760:CDS 35.0%
GAAGTTGGACAAAATAGTCA+TGG + chr1_2:78094481-78094500 Msa0094760:CDS 35.0%
CTAGGGAATGAAAATGACTT+TGG + chr1_2:78094613-78094632 Msa0094760:CDS 35.0%
!! AATGACTTTGGCTTTGACTT+TGG + chr1_2:78094625-78094644 Msa0094760:CDS 35.0%
!! ATGACTTTGGCTTTGACTTT+GGG + chr1_2:78094626-78094645 Msa0094760:CDS 35.0%
TGTTGTGAATCAAACTGAAG+TGG + chr1_2:78094828-78094847 Msa0094760:CDS 35.0%
GTTGTGAATCAAACTGAAGT+GGG + chr1_2:78094829-78094848 Msa0094760:CDS 35.0%
TCTCAGAAGAAGAGTAAAAC+TGG + chr1_2:78094925-78094944 Msa0094760:CDS 35.0%
CTCAGAAGAAGAGTAAAACT+GGG + chr1_2:78094926-78094945 Msa0094760:CDS 35.0%
AAGAAGAGTAAAACTGGGAA+GGG + chr1_2:78094931-78094950 Msa0094760:CDS 35.0%
AAGGATTATAAATGGGAGGT+TGG + chr1_2:78095207-78095226 Msa0094760:CDS 35.0%
ATGGAAGCAATGAGAACTTA+TGG + chr1_2:78095258-78095277 Msa0094760:CDS 35.0%
! AACTATAATGGAAAGGGTTC+AGG + chr1_2:78095530-78095549 Msa0094760:CDS 35.0%
GGAGAAGTGGAATATTCAAA+TGG + chr1_2:78095551-78095570 Msa0094760:CDS 35.0%
AGTGGAATATTCAAATGGGT+AGG + chr1_2:78095556-78095575 Msa0094760:CDS 35.0%
!! TATGCAGTGGAATTTGTTGA+AGG + chr1_2:78095603-78095622 Msa0094760:CDS 35.0%
!! ATGCAGTGGAATTTGTTGAA+GGG + chr1_2:78095604-78095623 Msa0094760:CDS 35.0%
!! GCTTTAGAGATCAATACACA+AGG + chr1_2:78095628-78095647 Msa0094760:CDS 35.0%
GTAATCTTGACAGTTGAATG+AGG - chr1_2:78095690-78095709 None:intergenic 35.0%
ATTACATCAACCCCATATGA+AGG + chr1_2:78095705-78095724 Msa0094760:CDS 35.0%
CTAGGACAAACTATTGCATT+TGG - chr1_2:78095753-78095772 None:intergenic 35.0%
CAATTGCATTTGCAGTTGTT+GGG + chr1_2:78095925-78095944 Msa0094760:intron 35.0%
!! TATTGATTTGTTGCTTCCTG+AGG + chr1_2:78096113-78096132 Msa0094760:CDS 35.0%
AGCATTTCTGTATGTAGCTT+TGG - chr1_2:78096229-78096248 None:intergenic 35.0%
AAGCTACATACAGAAATGCT+TGG + chr1_2:78096229-78096248 Msa0094760:CDS 35.0%
AGCTACATACAGAAATGCTT+GGG + chr1_2:78096230-78096249 Msa0094760:CDS 35.0%
ATACAGAAATGCTTGGGAAA+AGG + chr1_2:78096236-78096255 Msa0094760:CDS 35.0%
GGAAATTAAGGCTATAAGTG+AGG + chr1_2:78096266-78096285 Msa0094760:CDS 35.0%
AATTAAGGCTATAAGTGAGG+AGG + chr1_2:78096269-78096288 Msa0094760:CDS 35.0%
TGGATCTATTTCACACAGAT+AGG - chr1_2:78096301-78096320 None:intergenic 35.0%
GTGAAATAGATCCAAGACAT+TGG + chr1_2:78096307-78096326 Msa0094760:CDS 35.0%
! TGGACTAGGTCAATGTTTAA+AGG + chr1_2:78096327-78096346 Msa0094760:CDS 35.0%
! TTTCCATGATGGAGGATATA+AGG + chr1_2:78096433-78096452 Msa0094760:CDS 35.0%
AATCCTTATATCCTCCATCA+TGG - chr1_2:78096439-78096458 None:intergenic 35.0%
TAAGGATTTATGTCATGCAG+AGG + chr1_2:78096451-78096470 Msa0094760:CDS 35.0%
!! CTGGTTTATTTTCTTAGGCA+AGG + chr1_2:78096735-78096754 Msa0094760:intron 35.0%
!! GTTTATTTTCTTAGGCAAGG+TGG + chr1_2:78096738-78096757 Msa0094760:intron 35.0%
! TTATTTTCTTAGGCAAGGTG+GGG + chr1_2:78096740-78096759 Msa0094760:intron 35.0%
GTGATCCATTTATCAAGTTC+TGG + chr1_2:78096777-78096796 Msa0094760:CDS 35.0%
TGTCTCCAGAACTTGATAAA+TGG - chr1_2:78096785-78096804 None:intergenic 35.0%
CAGCTATCAAAAAACAACCT+GGG + chr1_2:78097036-78097055 Msa0094760:CDS 35.0%
!! CAAATGAAGAGAGCATCATA+TGG + chr1_2:78097113-78097132 Msa0094760:CDS 35.0%
CATATGGAATCAAATGCAGT+AGG + chr1_2:78097129-78097148 Msa0094760:CDS 35.0%
!! AGAAGCAAAAAGCATCAACT+AGG + chr1_2:78097429-78097448 Msa0094760:CDS 35.0%
ATGCTCCAACTAAGAAGATA+AGG + chr1_2:78097519-78097538 Msa0094760:CDS 35.0%
TGCTCCAACTAAGAAGATAA+GGG + chr1_2:78097520-78097539 Msa0094760:CDS 35.0%
AGTGTGTCCTACATTATGCT+GGG + chr1_2:78093909-78093928 Msa0094760:CDS 40.0%
TTAAGTCCCCAGCATAATGT+AGG - chr1_2:78093919-78093938 None:intergenic 40.0%
TTTAGTGACCCTGAGTATGT+AGG + chr1_2:78093944-78093963 Msa0094760:CDS 40.0%
TCACAGTCAAGTACTTCTTC+TGG - chr1_2:78093971-78093990 None:intergenic 40.0%
ATGTTAGACTGAAGTCCTTG+TGG + chr1_2:78094044-78094063 Msa0094760:CDS 40.0%
AGCAGGATCAAAATACCACA+AGG - chr1_2:78094062-78094081 None:intergenic 40.0%
!!! GTGGTATTTTGATCCTGCTA+TGG + chr1_2:78094063-78094082 Msa0094760:CDS 40.0%
TTTGATCCTGCTATGGAAGA+TGG + chr1_2:78094070-78094089 Msa0094760:CDS 40.0%
ATAGTGACATAGGGTGTAGA+AGG + chr1_2:78094107-78094126 Msa0094760:CDS 40.0%
!! CAATTTCAGGTTGTGACATG+GGG - chr1_2:78094183-78094202 None:intergenic 40.0%
GGGTTAAGCTCTACAATTTC+AGG - chr1_2:78094196-78094215 None:intergenic 40.0%
AATGAAAGTCCCACTAGTGT+AGG + chr1_2:78094271-78094290 Msa0094760:CDS 40.0%
TTGAGTGTACACATGCTGAT+GGG + chr1_2:78094356-78094375 Msa0094760:CDS 40.0%
!! TATGATAATGGGCCTGGATT+AGG + chr1_2:78094439-78094458 Msa0094760:CDS 40.0%
ACATTCACAGTTTCTTCCAC+TGG - chr1_2:78094547-78094566 None:intergenic 40.0%
AGTGGAAGAAACTGTGAATG+TGG + chr1_2:78094546-78094565 Msa0094760:CDS 40.0%
GTGGAAGAAACTGTGAATGT+GGG + chr1_2:78094547-78094566 Msa0094760:CDS 40.0%
!! TTTGGCTTTGACTTTGGGTT+AGG + chr1_2:78094631-78094650 Msa0094760:CDS 40.0%
!! TTGGCTTTGACTTTGGGTTA+GGG + chr1_2:78094632-78094651 Msa0094760:CDS 40.0%
! TGGGTTAGGGAATGAAAATG+AGG + chr1_2:78094645-78094664 Msa0094760:CDS 40.0%
AGGGAATGAAAATGAGGATC+TGG + chr1_2:78094651-78094670 Msa0094760:CDS 40.0%
AATGAAAATGAGGATCTGGC+TGG + chr1_2:78094655-78094674 Msa0094760:CDS 40.0%
CTCACCAAAATCTACACCAA+GGG - chr1_2:78094698-78094717 None:intergenic 40.0%
ACTCACCAAAATCTACACCA+AGG - chr1_2:78094699-78094718 None:intergenic 40.0%
AATCAAACTGAAGTGGGTGA+AGG + chr1_2:78094835-78094854 Msa0094760:CDS 40.0%
ACACTTCTAACAAGGGGAAA+AGG + chr1_2:78094884-78094903 Msa0094760:CDS 40.0%
TAACAAGGGGAAAAGGAAGA+AGG + chr1_2:78094891-78094910 Msa0094760:CDS 40.0%
AACAAGGGGAAAAGGAAGAA+GGG + chr1_2:78094892-78094911 Msa0094760:CDS 40.0%
GAAGAAGAGTAAAACTGGGA+AGG + chr1_2:78094930-78094949 Msa0094760:CDS 40.0%
AGAAGAGTAAAACTGGGAAG+GGG + chr1_2:78094932-78094951 Msa0094760:CDS 40.0%
AGACCCAAGAAAAAACAACC+AGG + chr1_2:78094970-78094989 Msa0094760:CDS 40.0%
! TCAAACACAGGATCTTTTCC+TGG - chr1_2:78094991-78095010 None:intergenic 40.0%
AGAACTTATGGAGTACACTC+TGG + chr1_2:78095270-78095289 Msa0094760:CDS 40.0%
! TTATGGAGTACACTCTGGAA+GGG + chr1_2:78095275-78095294 Msa0094760:CDS 40.0%
GATAAAGAAAGAGTGAGGGT+TGG + chr1_2:78095318-78095337 Msa0094760:CDS 40.0%
GCATTCTGTGCTAAAATACC+TGG + chr1_2:78095366-78095385 Msa0094760:CDS 40.0%
AAATACCTGGTGAAGAGACA+TGG + chr1_2:78095379-78095398 Msa0094760:CDS 40.0%
TAGGTGCTAAACTTCATGCA+AGG + chr1_2:78095478-78095497 Msa0094760:CDS 40.0%
AGGTGCTAAACTTCATGCAA+GGG + chr1_2:78095479-78095498 Msa0094760:CDS 40.0%
! TAGAGCAAAGAAGTATGCAG+TGG + chr1_2:78095590-78095609 Msa0094760:CDS 40.0%
! CTATTGCATTTGGGTTCTCT+AGG - chr1_2:78095743-78095762 None:intergenic 40.0%
!!! TGTATGTTTTAAGGGGTGCA+TGG + chr1_2:78095788-78095807 Msa0094760:CDS 40.0%
AGAAAGATCATTGGGCTTGA+TGG + chr1_2:78095828-78095847 Msa0094760:CDS 40.0%
! CTTGATGGTTGCTTCCTTAA+GGG + chr1_2:78095843-78095862 Msa0094760:CDS 40.0%
! TTGATGGTTGCTTCCTTAAG+GGG + chr1_2:78095844-78095863 Msa0094760:CDS 40.0%
GTCATTTGGATCCATTCCAA+TGG - chr1_2:78095895-78095914 None:intergenic 40.0%
CCAACAACTGCAAATGCAAT+TGG - chr1_2:78095927-78095946 None:intergenic 40.0%
CCAATTGCATTTGCAGTTGT+TGG + chr1_2:78095924-78095943 Msa0094760:intron 40.0%
CTTCTGTTGATCACTGATGA+TGG - chr1_2:78095977-78095996 None:intergenic 40.0%
CATCATCAGTGATCAACAGA+AGG + chr1_2:78095975-78095994 Msa0094760:intron 40.0%
GGAAGCAACAAATCAATAGC+TGG - chr1_2:78096111-78096130 None:intergenic 40.0%
TAGATCCAAGACATTGGACT+AGG + chr1_2:78096313-78096332 Msa0094760:CDS 40.0%
ATTGACCTAGTCCAATGTCT+TGG - chr1_2:78096321-78096340 None:intergenic 40.0%
ACTCTGTCATTGTGATTCCA+AGG + chr1_2:78096397-78096416 Msa0094760:CDS 40.0%
GATTTATGTCATGCAGAGGT+GGG + chr1_2:78096455-78096474 Msa0094760:CDS 40.0%
!! GCATTAAGTTTCTGGTTTCC+TGG + chr1_2:78096709-78096728 Msa0094760:intron 40.0%
GCTTCTTTCTTGTAGATGGA+TGG - chr1_2:78096930-78096949 None:intergenic 40.0%
AGCATGATATATCCTGCCAA+TGG + chr1_2:78096969-78096988 Msa0094760:CDS 40.0%
! CATCCACAGATTTTGTCCAT+TGG - chr1_2:78096988-78097007 None:intergenic 40.0%
ATGGACAAAATCTGTGGATG+AGG + chr1_2:78096988-78097007 Msa0094760:CDS 40.0%
!!! GGTTGTTTTTTGATAGCTGG+TGG - chr1_2:78097035-78097054 None:intergenic 40.0%
!!! CCAGGTTGTTTTTTGATAGC+TGG - chr1_2:78097038-78097057 None:intergenic 40.0%
CCAGCTATCAAAAAACAACC+TGG + chr1_2:78097035-78097054 Msa0094760:CDS 40.0%
!!! CTTTTCTTTTTAGGTCTCCC+AGG - chr1_2:78097056-78097075 None:intergenic 40.0%
TGAGTTTGAGTCTCTGATTC+AGG - chr1_2:78097215-78097234 None:intergenic 40.0%
AATCAAGCTTCTCAGGTTCA+GGG + chr1_2:78097326-78097345 Msa0094760:intron 40.0%
!! CTTTTTGCTTCTGAGAAGCT+TGG - chr1_2:78097421-78097440 None:intergenic 40.0%
AACTAGGAAGCGAAAGGTTA+AGG + chr1_2:78097445-78097464 Msa0094760:CDS 40.0%
!!! CTTTTGAGTTGGTGGAATCT+GGG - chr1_2:78097495-78097514 None:intergenic 40.0%
!!! GCATTTTGCTTTTGAGTTGG+TGG - chr1_2:78097503-78097522 None:intergenic 40.0%
!! GGAGCATTTTGCTTTTGAGT+TGG - chr1_2:78097506-78097525 None:intergenic 40.0%
CTAGCCCTTATCTTCTTAGT+TGG - chr1_2:78097527-78097546 None:intergenic 40.0%
GTAGGACACACTCAAACACT+TGG - chr1_2:78093901-78093920 None:intergenic 45.0%
GAGTGTGTCCTACATTATGC+TGG + chr1_2:78093908-78093927 Msa0094760:CDS 45.0%
GTGTGTCCTACATTATGCTG+GGG + chr1_2:78093910-78093929 Msa0094760:CDS 45.0%
CTTCTGGACCTACATACTCA+GGG - chr1_2:78093955-78093974 None:intergenic 45.0%
TCTTCTGGACCTACATACTC+AGG - chr1_2:78093956-78093975 None:intergenic 45.0%
TCCTGCTATGGAAGATGGAA+TGG + chr1_2:78094075-78094094 Msa0094760:CDS 45.0%
ACCATTCCATCTTCCATAGC+AGG - chr1_2:78094079-78094098 None:intergenic 45.0%
TGGGGTGAACAGCATACAAA+TGG - chr1_2:78094165-78094184 None:intergenic 45.0%
TCATTCCTAACAGGTGGGAT+AGG - chr1_2:78094247-78094266 None:intergenic 45.0%
!! AATGCTGATGGTGGTGTAAC+TGG + chr1_2:78094319-78094338 Msa0094760:CDS 45.0%
GCATGTGTACACTCAACAGT+GGG - chr1_2:78094352-78094371 None:intergenic 45.0%
AGCATGTGTACACTCAACAG+TGG - chr1_2:78094353-78094372 None:intergenic 45.0%
GTTGAGTGTACACATGCTGA+TGG + chr1_2:78094355-78094374 Msa0094760:CDS 45.0%
TGGTCATTTAAGTCCACCTC+AGG - chr1_2:78094382-78094401 None:intergenic 45.0%
! GAGGTGGACTTAAATGACCA+TGG + chr1_2:78094382-78094401 Msa0094760:CDS 45.0%
TCTCATCAATCATTGGGCCA+TGG - chr1_2:78094402-78094421 None:intergenic 45.0%
GTCTCATCATCTCCTAATCC+AGG - chr1_2:78094454-78094473 None:intergenic 45.0%
GATGAGACACAGACTGAAGT+TGG + chr1_2:78094466-78094485 Msa0094760:CDS 45.0%
! ACAGTTTCCTTCTCTAGCTC+AGG - chr1_2:78094508-78094527 None:intergenic 45.0%
AGAAACTGTGAATGTGGGTG+AGG + chr1_2:78094552-78094571 Msa0094760:CDS 45.0%
ACATTCACAGTTTCCTCCAC+TGG - chr1_2:78094580-78094599 None:intergenic 45.0%
AGTGGAGGAAACTGTGAATG+TGG + chr1_2:78094579-78094598 Msa0094760:CDS 45.0%
GTGGAGGAAACTGTGAATGT+GGG + chr1_2:78094580-78094599 Msa0094760:CDS 45.0%
! TCATTTTCATTCCCTAGCCC+AGG - chr1_2:78094610-78094629 None:intergenic 45.0%
!! AGTGCCCTTGGTGTAGATTT+TGG + chr1_2:78094691-78094710 Msa0094760:CDS 45.0%
! TTTTGGTGAGTCAGAAGCAG+AGG + chr1_2:78094708-78094727 Msa0094760:CDS 45.0%
!! AGGTGGAATTGGAGTTGATG+TGG + chr1_2:78094762-78094781 Msa0094760:CDS 45.0%
TGTTGAGACAGAGACTGAAG+TGG + chr1_2:78094792-78094811 Msa0094760:CDS 45.0%
GTTGAGACAGAGACTGAAGT+GGG + chr1_2:78094793-78094812 Msa0094760:CDS 45.0%
AAACTGGGAAGGGGAAAAAG+AGG + chr1_2:78094941-78094960 Msa0094760:CDS 45.0%
AGAGACTGCAGTAGCTGATA+GGG + chr1_2:78095071-78095090 Msa0094760:CDS 45.0%
! TAGTGGATCTGAGAGTGATG+AGG + chr1_2:78095134-78095153 Msa0094760:CDS 45.0%
CTTATGGAGTACACTCTGGA+AGG + chr1_2:78095274-78095293 Msa0094760:CDS 45.0%
ATGCAAGGAAGGATGTCCAT+GGG + chr1_2:78095341-78095360 Msa0094760:CDS 45.0%
AGAGACATGGCAGTTGAGAA+AGG + chr1_2:78095392-78095411 Msa0094760:CDS 45.0%
CAGTTGAGAAAGGTTTACCC+TGG + chr1_2:78095402-78095421 Msa0094760:CDS 45.0%
TGTCACACTCATGATCTCCA+GGG - chr1_2:78095422-78095441 None:intergenic 45.0%
ATGTCACACTCATGATCTCC+AGG - chr1_2:78095423-78095442 None:intergenic 45.0%
!! AACCCCATATGAAGGTACTG+AGG + chr1_2:78095713-78095732 Msa0094760:CDS 45.0%
AGCCTCAGTACCTTCATATG+GGG - chr1_2:78095718-78095737 None:intergenic 45.0%
CAGCCTCAGTACCTTCATAT+GGG - chr1_2:78095719-78095738 None:intergenic 45.0%
TCAGCCTCAGTACCTTCATA+TGG - chr1_2:78095720-78095739 None:intergenic 45.0%
! GCTTGATGGTTGCTTCCTTA+AGG + chr1_2:78095842-78095861 Msa0094760:CDS 45.0%
GCTAGCAACATTCCACCATA+AGG - chr1_2:78095870-78095889 None:intergenic 45.0%
TTGCATTTGCAGTTGTTGGG+AGG + chr1_2:78095928-78095947 Msa0094760:intron 45.0%
TGCTTGGGAAAAGGAGATGA+AGG + chr1_2:78096245-78096264 Msa0094760:CDS 45.0%
CATCATGGAAACAACTGGCT+TGG - chr1_2:78096424-78096443 None:intergenic 45.0%
! CAAGCCAGTTGTTTCCATGA+TGG + chr1_2:78096422-78096441 Msa0094760:CDS 45.0%
TCCTCCATCATGGAAACAAC+TGG - chr1_2:78096429-78096448 None:intergenic 45.0%
GGATTTATGTCATGCAGAGG+TGG + chr1_2:78096454-78096473 Msa0094760:CDS 45.0%
!! GTTTCTGGTTTCCTGGTTTC+TGG + chr1_2:78096716-78096735 Msa0094760:intron 45.0%
!! TGCTGTTAACTTGCAGCAGA+TGG + chr1_2:78096809-78096828 Msa0094760:CDS 45.0%
TGCAGGAAATGGTACTTGAC+AGG + chr1_2:78096840-78096859 Msa0094760:CDS 45.0%
GCAGGAAATGGTACTTGACA+GGG + chr1_2:78096841-78096860 Msa0094760:CDS 45.0%
! CACAGATTTTGTCCATTGGC+AGG - chr1_2:78096984-78097003 None:intergenic 45.0%
CTGCCAATGGACAAAATCTG+TGG + chr1_2:78096982-78097001 Msa0094760:CDS 45.0%
GATAGCTGGTGGTTGAAGAT+CGG - chr1_2:78097024-78097043 None:intergenic 45.0%
AGTGAGCTTCTCAGAGATAG+TGG + chr1_2:78097089-78097108 Msa0094760:CDS 45.0%
GTTTGAGTCTCTGATTCAGG+AGG - chr1_2:78097212-78097231 None:intergenic 45.0%
ACTTGTGCTTGAGGCTAAGA+TGG - chr1_2:78097242-78097261 None:intergenic 45.0%
TGAGTCTCAACTTGTGCTTG+AGG - chr1_2:78097251-78097270 None:intergenic 45.0%
! GTTTGAGTCTGAGATACCTG+TGG - chr1_2:78097284-78097303 None:intergenic 45.0%
TGCTCAGAATCAAGCTTCTC+AGG + chr1_2:78097319-78097338 Msa0094760:intron 45.0%
GAATCAAGCTTCTCAGGTTC+AGG + chr1_2:78097325-78097344 Msa0094760:intron 45.0%
TAATCAGAGCCAAGCTTCTC+AGG + chr1_2:78097364-78097383 Msa0094760:CDS 45.0%
AGCATCAACTAGGAAGCGAA+AGG + chr1_2:78097439-78097458 Msa0094760:CDS 45.0%
GAAGTTTGTGACTGAGTAGC+TGG - chr1_2:78097473-78097492 None:intergenic 45.0%
!!! GCTTTTGAGTTGGTGGAATC+TGG - chr1_2:78097496-78097515 None:intergenic 45.0%
!!! CCTGGCTTTGCAGATTGTTT+TGG - chr1_2:78097572-78097591 None:intergenic 45.0%
CCAAAACAATCTGCAAAGCC+AGG + chr1_2:78097569-78097588 Msa0094760:CDS 45.0%
TTCTTTCTCCTCTTGTCTCC+TGG - chr1_2:78097590-78097609 None:intergenic 45.0%
AGGAGACAAGAGGAGAAAGA+AGG + chr1_2:78097589-78097608 Msa0094760:CDS 45.0%
GGAGACAAGAGGAGAAAGAA+GGG + chr1_2:78097590-78097609 Msa0094760:CDS 45.0%
TCCTAACAGGTGGGATAGGT+GGG - chr1_2:78094243-78094262 None:intergenic 50.0%
TTCCTAACAGGTGGGATAGG+TGG - chr1_2:78094244-78094263 None:intergenic 50.0%
GGTGAGGGTTCAAATGCTGA+TGG + chr1_2:78094307-78094326 Msa0094760:CDS 50.0%
GAGGGTTCAAATGCTGATGG+TGG + chr1_2:78094310-78094329 Msa0094760:CDS 50.0%
! GATGGTGGTGTAACTGGTGT+AGG + chr1_2:78094325-78094344 Msa0094760:CDS 50.0%
!! GGTGAGTATGATAATGGGCC+TGG + chr1_2:78094433-78094452 Msa0094760:CDS 50.0%
GAATGTGAGTGAGACACCAG+TGG + chr1_2:78094528-78094547 Msa0094760:CDS 50.0%
AGCAGGAGACTTAGACAGTG+AGG + chr1_2:78094738-78094757 Msa0094760:CDS 50.0%
GGAGACTTAGACAGTGAGGT+AGG + chr1_2:78094742-78094761 Msa0094760:CDS 50.0%
GACTTAGACAGTGAGGTAGG+TGG + chr1_2:78094745-78094764 Msa0094760:CDS 50.0%
GACAGTGAGGTAGGTGGAAT+TGG + chr1_2:78094751-78094770 Msa0094760:CDS 50.0%
AAGTGGGTGAAGGATCTGTG+AGG + chr1_2:78094845-78094864 Msa0094760:CDS 50.0%
AGTGGGTGAAGGATCTGTGA+GGG + chr1_2:78094846-78094865 Msa0094760:CDS 50.0%
TGAAGGATCTGTGAGGGTAG+AGG + chr1_2:78094852-78094871 Msa0094760:CDS 50.0%
GAAGGATCTGTGAGGGTAGA+GGG + chr1_2:78094853-78094872 Msa0094760:CDS 50.0%
AAGGGGAAAAGGAAGAAGGG+AGG + chr1_2:78094895-78094914 Msa0094760:CDS 50.0%
GGGAAGGGGAAAAAGAGGAA+AGG + chr1_2:78094946-78094965 Msa0094760:CDS 50.0%
CAGAGACTGCAGTAGCTGAT+AGG + chr1_2:78095070-78095089 Msa0094760:CDS 50.0%
GAGACTGCAGTAGCTGATAG+GGG + chr1_2:78095072-78095091 Msa0094760:CDS 50.0%
GGATCTGAGAGTGATGAGGA+TGG + chr1_2:78095138-78095157 Msa0094760:CDS 50.0%
AAGAGTGAGGGTTGGATGCA+AGG + chr1_2:78095326-78095345 Msa0094760:CDS 50.0%
GATGCAAGGAAGGATGTCCA+TGG + chr1_2:78095340-78095359 Msa0094760:CDS 50.0%
TTAGCACAGAATGCCTCCCA+TGG - chr1_2:78095360-78095379 None:intergenic 50.0%
AACTGCCATGTCTCTTCACC+AGG - chr1_2:78095387-78095406 None:intergenic 50.0%
TGGAAAGGGTTCAGGAGAAG+TGG + chr1_2:78095538-78095557 Msa0094760:CDS 50.0%
TGCTTCCTTAAGGGGCCTTA+TGG + chr1_2:78095852-78095871 Msa0094760:CDS 50.0%
! TTCCTTAAGGGGCCTTATGG+TGG + chr1_2:78095855-78095874 Msa0094760:CDS 50.0%
TTCCACCATAAGGCCCCTTA+AGG - chr1_2:78095860-78095879 None:intergenic 50.0%
GGAATGTTGCTAGCTGCCAT+TGG + chr1_2:78095876-78095895 Msa0094760:CDS 50.0%
GTTGCTAGCTGCCATTGGAA+TGG + chr1_2:78095881-78095900 Msa0094760:CDS 50.0%
CAAAAGCTCTGCTCAACCTC+AGG - chr1_2:78096132-78096151 None:intergenic 50.0%
!! GAAACAACTGGCTTGGACCT+TGG - chr1_2:78096417-78096436 None:intergenic 50.0%
! GCCAGTTGTTTCCATGATGG+AGG + chr1_2:78096425-78096444 Msa0094760:CDS 50.0%
TGCAGAGGTGGGAGAAGAAT+AGG + chr1_2:78096466-78096485 Msa0094760:CDS 50.0%
TGGTGTGTGACTGCAGGAAA+TGG + chr1_2:78096829-78096848 Msa0094760:CDS 50.0%
CAAGCAATGGCATGACAGCA+TGG - chr1_2:78096870-78096889 None:intergenic 50.0%
TGCAGTAGGTGCAAGCAATG+TGG + chr1_2:78097143-78097162 Msa0094760:CDS 50.0%
TGAGTCTCTGATTCAGGAGG+TGG - chr1_2:78097209-78097228 None:intergenic 50.0%
AGCCAAGCTTCTCAGGTTCA+GGG + chr1_2:78097371-78097390 Msa0094760:CDS 50.0%
TACCCTGAACCTGAGAAGCT+TGG - chr1_2:78097331-78097350 None:intergenic 50.0%
GACAAGAGGAGAAAGAAGGG+AGG + chr1_2:78097593-78097612 Msa0094760:CDS 50.0%
GGGATAGGTGGGGCCATTAT+AGG - chr1_2:78094232-78094251 None:intergenic 55.0%
CCTAACAGGTGGGATAGGTG+GGG - chr1_2:78094242-78094261 None:intergenic 55.0%
GCAGTGGGACCTACACTAGT+GGG - chr1_2:78094283-78094302 None:intergenic 55.0%
AGCAGTGGGACCTACACTAG+TGG - chr1_2:78094284-78094303 None:intergenic 55.0%
TAGTGTAGGTCCCACTGCTG+AGG + chr1_2:78094285-78094304 Msa0094760:CDS 55.0%
AGTGTAGGTCCCACTGCTGA+GGG + chr1_2:78094286-78094305 Msa0094760:CDS 55.0%
! TACACATGCTGATGGGCCTG+AGG + chr1_2:78094363-78094382 Msa0094760:CDS 55.0%
TCATGGGCCTGAGCTAGAGA+AGG + chr1_2:78094498-78094517 Msa0094760:CDS 55.0%
ACTGTGAATGTGGGTGAGCC+TGG + chr1_2:78094589-78094608 Msa0094760:CDS 55.0%
CTGTGAATGTGGGTGAGCCT+GGG + chr1_2:78094590-78094609 Msa0094760:CDS 55.0%
TGAGGATCTGGCTGGTGAGA+AGG + chr1_2:78094663-78094682 Msa0094760:CDS 55.0%
GAGAAGGAAGACAGTGCCCT+TGG + chr1_2:78094679-78094698 Msa0094760:CDS 55.0%
TGGTGAGTCAGAAGCAGAGG+TGG + chr1_2:78094711-78094730 Msa0094760:CDS 55.0%
GGTGAGTCAGAAGCAGAGGT+GGG + chr1_2:78094712-78094731 Msa0094760:CDS 55.0%
GAAGCAGAGGTGGGAATAGC+AGG + chr1_2:78094721-78094740 Msa0094760:CDS 55.0%
GTGAGGGTTGGATGCAAGGA+AGG + chr1_2:78095330-78095349 Msa0094760:CDS 55.0%
CAAGGAAGGATGTCCATGGG+AGG + chr1_2:78095344-78095363 Msa0094760:CDS 55.0%
AGCAGATGGTGTGTGACTGC+AGG + chr1_2:78096823-78096842 Msa0094760:CDS 55.0%
TCTGATTCAGGAGGTGGAGG+TGG - chr1_2:78097203-78097222 None:intergenic 55.0%
GTCTCTGATTCAGGAGGTGG+AGG - chr1_2:78097206-78097225 None:intergenic 55.0%
GACTCAAACCAGTCAGCCAC+AGG + chr1_2:78097265-78097284 Msa0094760:intron 55.0%
CTGAGATACCTGTGGCTGAC+TGG - chr1_2:78097276-78097295 None:intergenic 55.0%
GAGCCAAGCTTCTCAGGTTC+AGG + chr1_2:78097370-78097389 Msa0094760:CDS 55.0%
CTGCAAAGCCAGGAGACAAG+AGG + chr1_2:78097579-78097598 Msa0094760:CDS 55.0%
CCCCACCTATCCCACCTGTT+AGG + chr1_2:78094239-78094258 Msa0094760:CDS 60.0%
GAACCCTCACCCTCAGCAGT+GGG - chr1_2:78094298-78094317 None:intergenic 60.0%
TGAACCCTCACCCTCAGCAG+TGG - chr1_2:78094299-78094318 None:intergenic 60.0%
! ACATGCTGATGGGCCTGAGG+TGG + chr1_2:78094366-78094385 Msa0094760:CDS 60.0%
! GAATGTGGGTGAGGCACCAG+TGG + chr1_2:78094561-78094580 Msa0094760:CDS 60.0%
AATGTGGGTGAGCCTGGGCT+AGG + chr1_2:78094595-78094614 Msa0094760:CDS 60.0%
ATGTGGGTGAGCCTGGGCTA+GGG + chr1_2:78094596-78094615 Msa0094760:CDS 60.0%
GATTCAGGAGGTGGAGGTGG+AGG - chr1_2:78097200-78097219 None:intergenic 60.0%
AGGTCCCACTGCTGAGGGTG+AGG + chr1_2:78094291-78094310 Msa0094760:CDS 65.0%
GGTCCCACTGCTGAGGGTGA+GGG + chr1_2:78094292-78094311 Msa0094760:CDS 65.0%
! TGTGGGTGAGGCACCAGTGG+AGG + chr1_2:78094564-78094583 Msa0094760:CDS 65.0%
! GAGGTGGAGGTGCAGGCAGT+GGG - chr1_2:78097187-78097206 None:intergenic 65.0%
! GGAGGTGGAGGTGCAGGCAG+TGG - chr1_2:78097188-78097207 None:intergenic 70.0%
! GGAGGTGGAGGTGGAGGTGC+AGG - chr1_2:78097194-78097213 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 78093893 78097637 78093893 ID=Msa0094760;Name=Msa0094760
chr1_2 mRNA 78093893 78097637 78093893 ID=Msa0094760-mRNA-1;Parent=Msa0094760;Name=Msa0094760-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0|0|1|1|1|4|0|1098
chr1_2 exon 78093893 78095938 78093893 ID=Msa0094760-mRNA-1:exon:27835;Parent=Msa0094760-mRNA-1
chr1_2 exon 78096099 78096583 78096099 ID=Msa0094760-mRNA-1:exon:27836;Parent=Msa0094760-mRNA-1
chr1_2 exon 78096752 78097235 78096752 ID=Msa0094760-mRNA-1:exon:27837;Parent=Msa0094760-mRNA-1
chr1_2 exon 78097356 78097637 78097356 ID=Msa0094760-mRNA-1:exon:27838;Parent=Msa0094760-mRNA-1
chr1_2 CDS 78093893 78095938 78093893 ID=Msa0094760-mRNA-1:cds;Parent=Msa0094760-mRNA-1
chr1_2 CDS 78096099 78096583 78096099 ID=Msa0094760-mRNA-1:cds;Parent=Msa0094760-mRNA-1
chr1_2 CDS 78096752 78097235 78096752 ID=Msa0094760-mRNA-1:cds;Parent=Msa0094760-mRNA-1
chr1_2 CDS 78097356 78097637 78097356 ID=Msa0094760-mRNA-1:cds;Parent=Msa0094760-mRNA-1
Gene Sequence

>Msa0094760

ATGGACCAAGTGTTTGAGTGTGTCCTACATTATGCTGGGGACTTAAGTTCTTTTAGTGACCCTGAGTATGTAGGTCCAGAAGAAGTACTTGACTGTGATCCAGATGTTTTCAGCTATTTTGCTTTGTTAGCAACCTTAAAAAGATTAGGTTATGTTAGACTGAAGTCCTTGTGGTATTTTGATCCTGCTATGGAAGATGGAATGGTAGCTTTGAATAGTGACATAGGGTGTAGAAGGATGCAGAATATTGCATATCAGTTTGATAGGGTCCATTTGTATGCTGTTCACCCCATGTCACAACCTGAAATTGTAGAGCTTAACCCATTGATAGAATATCCTATAATGGCCCCACCTATCCCACCTGTTAGGAATGAAACAAATGAAAGTCCCACTAGTGTAGGTCCCACTGCTGAGGGTGAGGGTTCAAATGCTGATGGTGGTGTAACTGGTGTAGGTCCCACTGTTGAGTGTACACATGCTGATGGGCCTGAGGTGGACTTAAATGACCATGGCCCAATGATTGATGAGAATGAATTGGTTGGTGAGTATGATAATGGGCCTGGATTAGGAGATGATGAGACACAGACTGAAGTTGGACAAAATAGTCATGGGCCTGAGCTAGAGAAGGAAACTGTGAATGTGAGTGAGACACCAGTGGAAGAAACTGTGAATGTGGGTGAGGCACCAGTGGAGGAAACTGTGAATGTGGGTGAGCCTGGGCTAGGGAATGAAAATGACTTTGGCTTTGACTTTGGGTTAGGGAATGAAAATGAGGATCTGGCTGGTGAGAAGGAAGACAGTGCCCTTGGTGTAGATTTTGGTGAGTCAGAAGCAGAGGTGGGAATAGCAGGAGACTTAGACAGTGAGGTAGGTGGAATTGGAGTTGATGTGGATTTAAATGTTGAGACAGAGACTGAAGTGGGTGAAGTGAACAATGTTGTGAATCAAACTGAAGTGGGTGAAGGATCTGTGAGGGTAGAGGGTAAAGATAACACTTCTAACAAGGGGAAAAGGAAGAAGGGAGGAGCTTCTTCTCAGAAGAAGAGTAAAACTGGGAAGGGGAAAAAGAGGAAAGGAAGACCCAAGAAAAAACAACCAGGAAAAGATCCTGTGTTTGAAGATGACATTATTGAGCAATTACAAAGGTCTGTTAACATTGAAAGTGAAGCAAGAGCATCAGAGACTGCAGTAGCTGATAGGGGTTTAGATGAATTAGATGAAGTCAATTCTGATGACTTGAATAGTGGATCTGAGAGTGATGAGGATGGTGTGAACAGATCCAAATTCCCAACTTTCAAAATGCCAGATAAAATGAAGGATTATAAATGGGAGGTTGGAACATATTTTGAGTCAAAGTTAGTTTTTATGGAAGCAATGAGAACTTATGGAGTACACTCTGGAAGGGCAATAAAATTTAGAAAGAATGATAAAGAAAGAGTGAGGGTTGGATGCAAGGAAGGATGTCCATGGGAGGCATTCTGTGCTAAAATACCTGGTGAAGAGACATGGCAGTTGAGAAAGGTTTACCCTGGAGATCATGAGTGTGACATAGACCACAATGTGAGTTTGATGAATTCTAGATGGTTAGGTGCTAAACTTCATGCAAGGGTTAGAGAGAATAGAGATCTTAAAATTTCAACTATAATGGAAAGGGTTCAGGAGAAGTGGAATATTCAAATGGGTAGGAGCAAAGCATATAGAGCAAAGAAGTATGCAGTGGAATTTGTTGAAGGGAGCTTTAGAGATCAATACACAAGGCTGCATGATTATGCTCATGAATTACTAAGGTCTAACCCTCATTCAACTGTCAAGATTACATCAACCCCATATGAAGGTACTGAGGCTGACCTAGAGAACCCAAATGCAATAGTTTGTCCTAGATTTCAGAGAATGTATGTATGTTTTAAGGGGTGCATGGATAGCTTTTTCAAATGCAGAAAGATCATTGGGCTTGATGGTTGCTTCCTTAAGGGGCCTTATGGTGGAATGTTGCTAGCTGCCATTGGAATGGATCCAAATGACCAAATACTTCCAATTGCATTTGCAGGACTTTTACCAGCTATTGATTTGTTGCTTCCTGAGGTTGAGCAGAGCTTTTGTGTGAGACATCTCTACAACAATTTTAGAAAGAGATTTCCTGGTAAAAAACTAAAAGAGTTAATGTGGAGAGCTGCCAAAGCTACATACAGAAATGCTTGGGAAAAGGAGATGAAGGAAATTAAGGCTATAAGTGAGGAGGCATTTACCTATCTGTGTGAAATAGATCCAAGACATTGGACTAGGTCAATGTTTAAAGGTGACTCAAAGTGTGACACATTAGTGAACAACATGTCAGAAGCCTTTAACTCTGTCATTGTGATTCCAAGGTCCAAGCCAGTTGTTTCCATGATGGAGGATATAAGGATTTATGTCATGCAGAGGTGGGAGAAGAATAGGCAGAAAATTACAAGGTTTGATGATGGTGCTATTCTGCCAAATATCAAGAAGAAGCTAGAAAAGGAATCATCTTATACAAATAACTGGATAGTAAGGCAAGGTGGGGATCATGATTTCCAAGTGATCCATTTATCAAGTTCTGGAGACAAGTATGCTGTTAACTTGCAGCAGATGGTGTGTGACTGCAGGAAATGGTACTTGACAGGGCTGCCATGCTGTCATGCCATTGCTTGCATAAAACACAAACATTACAACATTGCTGACTATGTGCCATCCATCTACAAGAAAGAAGCATATGTTGATTGTTATTCAAGCATGATATATCCTGCCAATGGACAAAATCTGTGGATGAGGACTGAATATACCGATCTTCAACCACCAGCTATCAAAAAACAACCTGGGAGACCTAAAAAGAAAAGAAGATTGGATGCAAGTGAGCTTCTCAGAGATAGTGGACAAATGAAGAGAGCATCATATGGAATCAAATGCAGTAGGTGCAAGCAATGTGGACACAACAAGTCAACATGCCCACTGCCTGCACCTCCACCTCCACCTCCTGAATCAGAGACTCAAACTCAAACTCAAGCTAATCAGAGCCAAGCTTCTCAGGTTCAGGGTACTCAGACTCAAGCTAATCAGAGCCAAGCTTCTCAGAAGCAAAAAGCATCAACTAGGAAGCGAAAGGTTAAGGCTCCAGCTACTCAGTCACAAACTTCCCAGATTCCACCAACTCAAAAGCAAAATGCTCCAACTAAGAAGATAAGGGCTAGTGATCAAGTTTCTGCTACTCAACCAAAACAATCTGCAAAGCCAGGAGACAAGAGGAGAAAGAAGGGAGGATATGCTACTCAGCCAATGTAG
Protein sequence

>Msa0094760

MDQVFECVLHYAGDLSSFSDPEYVGPEEVLDCDPDVFSYFALLATLKRLGYVRLKSLWYFDPAMEDGMVALNSDIGCRRMQNIAYQFDRVHLYAVHPMSQPEIVELNPLIEYPIMAPPIPPVRNETNESPTSVGPTAEGEGSNADGGVTGVGPTVECTHADGPEVDLNDHGPMIDENELVGEYDNGPGLGDDETQTEVGQNSHGPELEKETVNVSETPVEETVNVGEAPVEETVNVGEPGLGNENDFGFDFGLGNENEDLAGEKEDSALGVDFGESEAEVGIAGDLDSEVGGIGVDVDLNVETETEVGEVNNVVNQTEVGEGSVRVEGKDNTSNKGKRKKGGASSQKKSKTGKGKKRKGRPKKKQPGKDPVFEDDIIEQLQRSVNIESEARASETAVADRGLDELDEVNSDDLNSGSESDEDGVNRSKFPTFKMPDKMKDYKWEVGTYFESKLVFMEAMRTYGVHSGRAIKFRKNDKERVRVGCKEGCPWEAFCAKIPGEETWQLRKVYPGDHECDIDHNVSLMNSRWLGAKLHARVRENRDLKISTIMERVQEKWNIQMGRSKAYRAKKYAVEFVEGSFRDQYTRLHDYAHELLRSNPHSTVKITSTPYEGTEADLENPNAIVCPRFQRMYVCFKGCMDSFFKCRKIIGLDGCFLKGPYGGMLLAAIGMDPNDQILPIAFAGLLPAIDLLLPEVEQSFCVRHLYNNFRKRFPGKKLKELMWRAAKATYRNAWEKEMKEIKAISEEAFTYLCEIDPRHWTRSMFKGDSKCDTLVNNMSEAFNSVIVIPRSKPVVSMMEDIRIYVMQRWEKNRQKITRFDDGAILPNIKKKLEKESSYTNNWIVRQGGDHDFQVIHLSSSGDKYAVNLQQMVCDCRKWYLTGLPCCHAIACIKHKHYNIADYVPSIYKKEAYVDCYSSMIYPANGQNLWMRTEYTDLQPPAIKKQPGRPKKKRRLDASELLRDSGQMKRASYGIKCSRCKQCGHNKSTCPLPAPPPPPPESETQTQTQANQSQASQVQGTQTQANQSQASQKQKASTRKRKVKAPATQSQTSQIPPTQKQNAPTKKIRASDQVSATQPKQSAKPGDKRRKKGGYATQPM*