Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1003060 | XP_024641477.2 | 80.864 | 162 | 31 | 0 | 191 | 352 | 684 | 845 | 7.73e-89 | 306 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1003060 | A0A396HCB5 | 80.864 | 162 | 31 | 0 | 191 | 352 | 684 | 845 | 3.69e-89 | 306 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017280 | Msa1003060 | 0.802681 | 4.998528e-49 | -8.615850e-47 |
| Msa0087010 | Msa1003060 | 0.802873 | 4.562888e-49 | -8.615850e-47 |
| Msa0094760 | Msa1003060 | 0.941688 | 2.688167e-101 | -8.615850e-47 |
| Msa0649960 | Msa1003060 | 0.816581 | 5.137779e-52 | -8.615850e-47 |
| Msa0655670 | Msa1003060 | 0.826751 | 2.283793e-54 | -8.615850e-47 |
| Msa0157210 | Msa1003060 | 0.800624 | 1.320936e-48 | -8.615850e-47 |
| Msa1003060 | Msa1009560 | 0.855116 | 7.829345e-62 | -8.615850e-47 |
| Msa1003060 | Msa1306260 | 0.855526 | 5.946891e-62 | -8.615850e-47 |
| Msa1003060 | Msa1405570 | 0.849538 | 3.032547e-60 | -8.615850e-47 |
| Msa0520410 | Msa1003060 | 0.858282 | 9.167395e-63 | -8.615850e-47 |
| Msa0542240 | Msa1003060 | 0.942561 | 5.782471e-102 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1003060 | MtrunA17_Chr6g0462901 | 80.864 | 162 | 31 | 0 | 191 | 352 | 684 | 845 | 7.11e-93 | 306 |
| Msa1003060 | MtrunA17_Chr6g0462901 | 36.957 | 184 | 45 | 8 | 5 | 169 | 137 | 268 | 1.22e-15 | 80.5 |
| Msa1003060 | MtrunA17_Chr3g0081981 | 70.122 | 164 | 48 | 1 | 191 | 354 | 241 | 403 | 4.99e-77 | 255 |
| Msa1003060 | MtrunA17_Chr2g0281381 | 67.683 | 164 | 52 | 1 | 191 | 354 | 640 | 802 | 3.23e-69 | 240 |
| Msa1003060 | MtrunA17_Chr6g0455001 | 60.000 | 170 | 65 | 1 | 191 | 360 | 90 | 256 | 4.03e-69 | 228 |
| Msa1003060 | MtrunA17_Chr8g0362211 | 58.065 | 155 | 33 | 2 | 1 | 155 | 153 | 275 | 2.77e-43 | 155 |
| Msa1003060 | MtrunA17_Chr6g0477881 | 38.509 | 161 | 97 | 2 | 191 | 350 | 597 | 756 | 4.30e-33 | 134 |
| Msa1003060 | MtrunA17_Chr6g0477921 | 38.509 | 161 | 97 | 2 | 191 | 350 | 597 | 756 | 5.20e-33 | 134 |
| Msa1003060 | MtrunA17_Chr8g0373261 | 38.182 | 165 | 101 | 1 | 191 | 355 | 583 | 746 | 2.38e-31 | 129 |
| Msa1003060 | MtrunA17_Chr3g0083771 | 65.823 | 79 | 19 | 3 | 342 | 418 | 2 | 74 | 1.83e-18 | 79.7 |
| Msa1003060 | MtrunA17_Chr1g0190521 | 29.560 | 159 | 106 | 3 | 192 | 346 | 462 | 618 | 6.99e-16 | 80.9 |
| Msa1003060 | MtrunA17_Chr5g0404701 | 35.514 | 107 | 68 | 1 | 244 | 350 | 6 | 111 | 7.05e-16 | 76.3 |
| Msa1003060 | MtrunA17_Chr1g0190511 | 28.834 | 163 | 114 | 2 | 192 | 354 | 357 | 517 | 1.01e-14 | 77.0 |
| Msa1003060 | MtrunA17_Chr8g0338951 | 35.659 | 129 | 78 | 3 | 230 | 354 | 1 | 128 | 1.52e-14 | 74.7 |
| Msa1003060 | MtrunA17_Chr2g0303271 | 39.623 | 159 | 38 | 8 | 1 | 158 | 135 | 236 | 4.88e-13 | 69.7 |
| Msa1003060 | MtrunA17_Chr4g0049281 | 33.613 | 119 | 77 | 2 | 191 | 309 | 273 | 389 | 1.27e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 150 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAGCTTCTTCTTGATATT+TGG | 0.184548 | 7_1:-81656 | None:intergenic |
| CCTGGCTTTGCAGATTGTTT+TGG | 0.231455 | 7_1:-82706 | None:intergenic |
| AATCACAATGACAGAGTTAA+AGG | 0.247572 | 7_1:-81522 | None:intergenic |
| AATCATCTTATACAAATAAT+TGG | 0.251454 | 7_1:+81684 | Msa1003060:CDS |
| TGAGTTTGAGTCTCTGATTC+AGG | 0.252292 | 7_1:-82349 | None:intergenic |
| GAATCAAGCTTCTCAGGTTC+AGG | 0.295741 | 7_1:+82462 | Msa1003060:CDS |
| GAGCCAAGCTTCTCAGGTTC+AGG | 0.300209 | 7_1:+82507 | Msa1003060:CDS |
| AGTGCCCTTGGTGTAGATTT+TGG | 0.311143 | 7_1:+79766 | Msa1003060:CDS |
| TTTGGATTTGACTTTGGGTT+AGG | 0.323435 | 7_1:+79706 | Msa1003060:CDS |
| TTCTTTCTCCTCTTGTCTCC+TGG | 0.329051 | 7_1:-82724 | None:intergenic |
| AAAGGAGATGAAGGAAATTA+AGG | 0.339624 | 7_1:+81385 | Msa1003060:CDS |
| ATGACTTTGGATTTGACTTT+GGG | 0.347776 | 7_1:+79701 | Msa1003060:CDS |
| TCAGGAGGTGGAGGTGGAGG+TGG | 0.350003 | 7_1:-82331 | None:intergenic |
| GACAGTGAGGTAGGTGGAAT+TGG | 0.351602 | 7_1:+79826 | Msa1003060:CDS |
| ACTGTGAATGTGGGTGAGCC+TGG | 0.352244 | 7_1:+79664 | Msa1003060:CDS |
| GGAGGTGGAGGTGGAGGTGC+AGG | 0.355999 | 7_1:-82322 | None:intergenic |
| AATTCATTCTCATCAATCAT+TGG | 0.356643 | 7_1:-79481 | None:intergenic |
| TATGATAATGGGCCTGGATT+AGG | 0.369826 | 7_1:+79514 | Msa1003060:CDS |
| TGGACTAGGTCAATGTTTAA+AGG | 0.371517 | 7_1:+81458 | Msa1003060:CDS |
| GGAGGTGGAGGTGGAGGTGG+AGG | 0.376948 | 7_1:-82328 | None:intergenic |
| CTAGCCCTTATCTTCTTAGT+TGG | 0.386193 | 7_1:-82661 | None:intergenic |
| AGCATTTCTGTATGTAGCTT+TGG | 0.388479 | 7_1:-81357 | None:intergenic |
| TATCCATGATGGAGGATATA+AGG | 0.389788 | 7_1:+81564 | Msa1003060:CDS |
| TAATCAGAGCCAAGCTTCTC+AGG | 0.400512 | 7_1:+82501 | Msa1003060:CDS |
| AATGCTGATGGTGGTGTAAC+TGG | 0.400907 | 7_1:+79394 | Msa1003060:CDS |
| TGCTCAGAATCAAGCTTCTC+AGG | 0.401951 | 7_1:+82456 | Msa1003060:CDS |
| AATGACTTTGGATTTGACTT+TGG | 0.404911 | 7_1:+79700 | Msa1003060:CDS |
| ATAGTTTCCTTCTCTAGCTC+AGG | 0.405351 | 7_1:-79580 | None:intergenic |
| GATACAACTGGCTTGGACCT+TGG | 0.415458 | 7_1:-81545 | None:intergenic |
| GGAGGTGGAGGTGCAGGCAG+TGG | 0.416374 | 7_1:-82316 | None:intergenic |
| GATTCAGGAGGTGGAGGTGG+AGG | 0.422147 | 7_1:-82334 | None:intergenic |
| CTAGGGAATGAAAATGACTT+TGG | 0.422394 | 7_1:+79688 | Msa1003060:CDS |
| CTGAGATACCTGTGGCTGAC+TGG | 0.423610 | 7_1:-82410 | None:intergenic |
| GAGGTGGAGGTGCAGGCAGT+GGG | 0.425991 | 7_1:-82315 | None:intergenic |
| GAAGCAGAGGTGGGAATAGC+AGG | 0.429073 | 7_1:+79796 | Msa1003060:CDS |
| TGCAGAGGTGGGAGAAGAAT+AGG | 0.434665 | 7_1:+81597 | Msa1003060:CDS |
| ATGCTCCAACTAAGAAGATA+AGG | 0.434883 | 7_1:+82656 | Msa1003060:CDS |
| ATTCATTCTCATCAATCATT+GGG | 0.439176 | 7_1:-79480 | None:intergenic |
| TTGGATTTGACTTTGGGTTA+GGG | 0.441174 | 7_1:+79707 | Msa1003060:CDS |
| AGGTCCCACTGCTGAGGGTG+AGG | 0.448663 | 7_1:+79366 | None:intergenic |
| ATACAAATAATTGGATAGTA+AGG | 0.449672 | 7_1:+81693 | Msa1003060:CDS |
| TTGGTTGGTGAGTATGATAA+TGG | 0.458161 | 7_1:+79502 | Msa1003060:CDS |
| AACTAGGAAGAGAAAGGTTA+AGG | 0.459717 | 7_1:+82582 | Msa1003060:CDS |
| AATGATTGATGAGAATGAAT+TGG | 0.461256 | 7_1:+79483 | Msa1003060:CDS |
| AGGGAATGAAAATGAGGATC+TGG | 0.464724 | 7_1:+79726 | Msa1003060:CDS |
| ATACAGAAATGCTTGGGAAA+AGG | 0.471617 | 7_1:+81367 | Msa1003060:CDS |
| TCCTCCATCATGGATACAAC+TGG | 0.473724 | 7_1:-81557 | None:intergenic |
| AGCTACATACAGAAATGCTT+GGG | 0.475989 | 7_1:+81361 | Msa1003060:CDS |
| AGGAGACAAGAGGAGAAAGA+AGG | 0.477177 | 7_1:+82726 | Msa1003060:CDS |
| AATGTGGGTGAGCCTGGGCT+AGG | 0.477801 | 7_1:+79670 | Msa1003060:CDS |
| TGCTCCAACTAAGAAGATAA+GGG | 0.478396 | 7_1:+82657 | Msa1003060:CDS |
| TGCTTGGGAAAAGGAGATGA+AGG | 0.478933 | 7_1:+81376 | Msa1003060:CDS |
| TCTGATTCAGGAGGTGGAGG+TGG | 0.482726 | 7_1:-82337 | None:intergenic |
| ACATTCACAGTTTCTTCCAC+TGG | 0.487456 | 7_1:-79619 | None:intergenic |
| TGGATCTATTTCACACAGAT+AGG | 0.490360 | 7_1:-81429 | None:intergenic |
| ACTTGTGCTTGAGGCTGAGA+TGG | 0.493176 | 7_1:-82376 | None:intergenic |
| GTCTCTGATTCAGGAGGTGG+AGG | 0.493494 | 7_1:-82340 | None:intergenic |
| GGTGAGTATGATAATGGGCC+TGG | 0.496335 | 7_1:+79508 | Msa1003060:CDS |
| CATCATGGATACAACTGGCT+TGG | 0.498372 | 7_1:-81552 | None:intergenic |
| GAAGTTTGTGACTGAGTAGC+TGG | 0.500286 | 7_1:-82607 | None:intergenic |
| TGAGTCTCTGATTCAGGAGG+TGG | 0.503198 | 7_1:-82343 | None:intergenic |
| CAAAACCTCTGCTCAACCTC+AGG | 0.504401 | 7_1:-81260 | None:intergenic |
| GATGAGACACAGACTGAAGT+TGG | 0.504679 | 7_1:+79541 | Msa1003060:CDS |
| GTCTCATCATCTCCTAATCC+AGG | 0.506310 | 7_1:-79526 | None:intergenic |
| TAAATTGCCTAATACTACAT+TGG | 0.511395 | 7_1:-82766 | None:intergenic |
| TATCAAGAAGAAGCTAGAAA+AGG | 0.512265 | 7_1:+81661 | Msa1003060:CDS |
| AAGCTACATACAGAAATGCT+TGG | 0.513838 | 7_1:+81360 | Msa1003060:CDS |
| AAAATTACAAGGTTTGATGA+TGG | 0.513906 | 7_1:+81623 | Msa1003060:CDS |
| GGAGACAAGAGGAGAAAGAA+GGG | 0.515327 | 7_1:+82727 | Msa1003060:CDS |
| ACATTCACAGTTTCCTCCAC+TGG | 0.519050 | 7_1:-79652 | None:intergenic |
| AGCCAAGCTTCTCAGGTTCA+GGG | 0.521507 | 7_1:+82508 | Msa1003060:CDS |
| ATTGACCTAGTCCAATGTCT+TGG | 0.521867 | 7_1:-81449 | None:intergenic |
| ACTCTGTCATTGTGATTCCA+AGG | 0.523097 | 7_1:+81528 | Msa1003060:CDS |
| GGAAGCAACAAATCAATAGC+TGG | 0.527319 | 7_1:-81239 | None:intergenic |
| AATCAAGCTTCTCAGGTTCA+GGG | 0.528452 | 7_1:+82463 | Msa1003060:CDS |
| TGGTCATTTAAGTCCACCTC+AGG | 0.531490 | 7_1:-79454 | None:intergenic |
| GGTCCCACTGCTGAGGGTGA+GGG | 0.535123 | 7_1:+79367 | None:intergenic |
| TAGTGTAGGTCCCACTGCTG+AGG | 0.536905 | 7_1:+79360 | None:intergenic |
| TGGGTTAGGGAATGAAAATG+AGG | 0.537603 | 7_1:+79720 | Msa1003060:CDS |
| TGAGGATCTGGCTGGTGAGA+AGG | 0.539286 | 7_1:+79738 | Msa1003060:CDS |
| AATCCTTATATCCTCCATCA+TGG | 0.543332 | 7_1:-81567 | None:intergenic |
| AGCATCAACTAGGAAGAGAA+AGG | 0.547023 | 7_1:+82576 | Msa1003060:CDS |
| TATTGATTTGTTGCTTCCTG+AGG | 0.547901 | 7_1:+81244 | Msa1003060:CDS |
| GGATTTATGTCATGCAGAGG+TGG | 0.548528 | 7_1:+81585 | Msa1003060:CDS |
| GATGGTGGTGTAACTGGTGT+AGG | 0.549726 | 7_1:+79400 | Msa1003060:CDS |
| GAAGTTGGACAAAATAGTCA+TGG | 0.551663 | 7_1:+79556 | Msa1003060:CDS |
| CCAAAACAATCTGCAAAGCC+AGG | 0.552811 | 7_1:+82706 | Msa1003060:CDS |
| TGGTGAGTCAGAAGCAGAGG+TGG | 0.557655 | 7_1:+79786 | Msa1003060:CDS |
| GGAAATTAAGGCTATAAGTG+AGG | 0.557790 | 7_1:+81397 | Msa1003060:CDS |
| TACCCTGAACCTGAGAAGCT+TGG | 0.560959 | 7_1:-82510 | None:intergenic |
| GACAAGAGGAGAAAGAAGGG+AGG | 0.562572 | 7_1:+82730 | Msa1003060:CDS |
| ATGTGGGTGAGCCTGGGCTA+GGG | 0.564257 | 7_1:+79671 | Msa1003060:CDS |
| TGGTTGGTGAGTATGATAAT+GGG | 0.565236 | 7_1:+79503 | Msa1003060:CDS |
| CAAGCCAGTTGTATCCATGA+TGG | 0.568359 | 7_1:+81553 | Msa1003060:CDS |
| CTGTGAATGTGGGTGAGCCT+GGG | 0.570195 | 7_1:+79665 | Msa1003060:CDS |
| AGGTGGAATTGGAGTTGATG+TGG | 0.574739 | 7_1:+79837 | Msa1003060:CDS |
| GTGAAATAGATCCAAGACAT+TGG | 0.574774 | 7_1:+81438 | Msa1003060:CDS |
| GATTTATGTCATGCAGAGGT+GGG | 0.575651 | 7_1:+81586 | Msa1003060:CDS |
| TGAGTCTCAACTTGTGCTTG+AGG | 0.576936 | 7_1:-82385 | None:intergenic |
| GACTCAAACCAGTCAGCCAC+AGG | 0.579599 | 7_1:+82402 | Msa1003060:CDS |
| TAGATCCAAGACATTGGACT+AGG | 0.580081 | 7_1:+81444 | Msa1003060:CDS |
| GAGAAGGAAGACAGTGCCCT+TGG | 0.582909 | 7_1:+79754 | Msa1003060:CDS |
| AGTGTAGGTCCCACTGCTGA+GGG | 0.584283 | 7_1:+79361 | None:intergenic |
| GGAGACTTAGACAGTGAGGT+AGG | 0.591116 | 7_1:+79817 | Msa1003060:CDS |
| GAGGGTTCAAATGCTGATGG+TGG | 0.595119 | 7_1:+79385 | Msa1003060:CDS |
| GTTTGAGTCTCTGATTCAGG+AGG | 0.595918 | 7_1:-82346 | None:intergenic |
| TGCTTCCTGAGGTTGAGCAG+AGG | 0.597230 | 7_1:+81255 | Msa1003060:CDS |
| ATTGATGAGAATGAATTGGT+TGG | 0.602699 | 7_1:+79487 | Msa1003060:CDS |
| AGAATAGGCAGAAAATTACA+AGG | 0.607332 | 7_1:+81612 | Msa1003060:CDS |
| GGTGAGTCAGAAGCAGAGGT+GGG | 0.609791 | 7_1:+79787 | Msa1003060:CDS |
| TCTCATCAATCATTGGGCCA+TGG | 0.611466 | 7_1:-79474 | None:intergenic |
| GGTGAGGGTTCAAATGCTGA+TGG | 0.614922 | 7_1:+79382 | Msa1003060:CDS |
| ACATGCTGATGGGCCTGAGG+TGG | 0.615733 | 7_1:+79441 | Msa1003060:CDS |
| AGTGGAAGAAACTGTGAATG+TGG | 0.618036 | 7_1:+79621 | Msa1003060:CDS |
| AGAAACTGTGAATGTGGGTG+AGG | 0.618668 | 7_1:+79627 | Msa1003060:CDS |
| TGAACCCTCACCCTCAGCAG+TGG | 0.618681 | 7_1:-79371 | None:intergenic |
| GAACCCTCACCCTCAGCAGT+GGG | 0.619167 | 7_1:-79370 | None:intergenic |
| AGTGGAGGAAACTGTGAATG+TGG | 0.620332 | 7_1:+79654 | Msa1003060:CDS |
| AAGTTGGACAAAATAGTCAT+GGG | 0.623438 | 7_1:+79557 | Msa1003060:CDS |
| TGTTGTGAATCAAACTGAAG+TGG | 0.623562 | 7_1:+79903 | Msa1003060:CDS |
| GTTGAGTGTACACATGCTGA+TGG | 0.623920 | 7_1:+79430 | Msa1003060:CDS |
| CTGCAAAGCCAGGAGACAAG+AGG | 0.627386 | 7_1:+82716 | Msa1003060:CDS |
| TTGAGTGTACACATGCTGAT+GGG | 0.630401 | 7_1:+79431 | Msa1003060:CDS |
| TCATGGGCCTGAGCTAGAGA+AGG | 0.630984 | 7_1:+79573 | Msa1003060:CDS |
| TGTGGGTGAGGCACCAGTGG+AGG | 0.631555 | 7_1:+79639 | Msa1003060:CDS |
| GAATGTGGGTGAGGCACCAG+TGG | 0.632214 | 7_1:+79636 | Msa1003060:CDS |
| GACTTAGACAGTGAGGTAGG+TGG | 0.634372 | 7_1:+79820 | Msa1003060:CDS |
| GAATGTGAGTGAGGCACCAG+TGG | 0.635729 | 7_1:+79603 | Msa1003060:CDS |
| GCCAGTTGTATCCATGATGG+AGG | 0.638976 | 7_1:+81556 | Msa1003060:CDS |
| AATTAAGGCTATAAGTGAGG+AGG | 0.641286 | 7_1:+81400 | Msa1003060:CDS |
| GAGGTGGACTTAAATGACCA+TGG | 0.643375 | 7_1:+79457 | Msa1003060:CDS |
| CTCACCAAAATCTACACCAA+GGG | 0.646818 | 7_1:-79770 | None:intergenic |
| AATGAAAATGAGGATCTGGC+TGG | 0.646878 | 7_1:+79730 | Msa1003060:CDS |
| AATCAAACTGAAGTGGGTGA+AGG | 0.647438 | 7_1:+79910 | Msa1003060:CDS |
| TACACATGCTGATGGGCCTG+AGG | 0.649535 | 7_1:+79438 | Msa1003060:CDS |
| TGCAGTAGGTGCAAGCAATG+TGG | 0.650916 | 7_1:+82274 | Msa1003060:intron |
| AGCAGGAGACTTAGACAGTG+AGG | 0.654339 | 7_1:+79813 | Msa1003060:CDS |
| TAAGGATTTATGTCATGCAG+AGG | 0.655039 | 7_1:+81582 | Msa1003060:CDS |
| GCATGTGTACACTCAACAGT+GGG | 0.657460 | 7_1:-79424 | None:intergenic |
| GGAAACTATGAATGTGAGTG+AGG | 0.660472 | 7_1:+79594 | Msa1003060:CDS |
| GTTGTGAATCAAACTGAAGT+GGG | 0.672017 | 7_1:+79904 | Msa1003060:CDS |
| AGCATGTGTACACTCAACAG+TGG | 0.691406 | 7_1:-79425 | None:intergenic |
| ACTCACCAAAATCTACACCA+AGG | 0.695544 | 7_1:-79771 | None:intergenic |
| TGTTGAGACAGAGACTGAAG+TGG | 0.701597 | 7_1:+79867 | Msa1003060:CDS |
| GTTTGAGTCTGAGATACCTG+TGG | 0.703378 | 7_1:-82418 | None:intergenic |
| GTGGAAGAAACTGTGAATGT+GGG | 0.705644 | 7_1:+79622 | Msa1003060:CDS |
| GTGGAGGAAACTGTGAATGT+GGG | 0.707940 | 7_1:+79655 | Msa1003060:CDS |
| AGTGGGTGAAGGATCTGTGA+GGG | 0.739409 | 7_1:+79921 | Msa1003060:CDS |
| GTTGAGACAGAGACTGAAGT+GGG | 0.744646 | 7_1:+79868 | Msa1003060:CDS |
| AAGTGGGTGAAGGATCTGTG+AGG | 0.773976 | 7_1:+79920 | Msa1003060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATGAAGGATTATAAA+TGG | + | chr7_1:80274-80293 | Msa1003060:intron | 15.0% |
| !! | TAAAATGAAGGATTATAAAT+GGG | + | chr7_1:80275-80294 | Msa1003060:intron | 15.0% |
| !! | TCTTAAAATTTCAACTATAA+TGG | + | chr7_1:80593-80612 | Msa1003060:intron | 15.0% |
| !! | AATCATCTTATACAAATAAT+TGG | + | chr7_1:81684-81703 | Msa1003060:CDS | 15.0% |
| !! | ATATTTAATCAACATACAAA+TGG | - | chr7_1:81792-81811 | None:intergenic | 15.0% |
| !!! | AATATTTTGTATTAAGTTTC+TGG | + | chr7_1:81807-81826 | Msa1003060:intron | 15.0% |
| !!! | TTATAATCCTTCATTTTATC+TGG | - | chr7_1:80273-80292 | None:intergenic | 20.0% |
| !!! | AGAATGTATGTATGTTTTAA+GGG | + | chr7_1:80855-80874 | Msa1003060:intron | 20.0% |
| !!! | TTTGTTGTATTGTATCTATT+AGG | + | chr7_1:81208-81227 | Msa1003060:intron | 20.0% |
| !! | TTGTTGTATTGTATCTATTA+GGG | + | chr7_1:81209-81228 | Msa1003060:intron | 20.0% |
| !! | AAAAACTAAAAGAGTTAATG+TGG | + | chr7_1:81327-81346 | Msa1003060:CDS | 20.0% |
| !! | ATACAAATAATTGGATAGTA+AGG | + | chr7_1:81693-81712 | Msa1003060:CDS | 20.0% |
| !!! | AGGTATTAATTTTCATTTGT+AGG | + | chr7_1:81713-81732 | Msa1003060:intron | 20.0% |
| ! | ATTCATTCTCATCAATCATT+GGG | - | chr7_1:79483-79502 | None:intergenic | 25.0% |
| ! | AATTCATTCTCATCAATCAT+TGG | - | chr7_1:79484-79503 | None:intergenic | 25.0% |
| ! | AATGATTGATGAGAATGAAT+TGG | + | chr7_1:79483-79502 | Msa1003060:CDS | 25.0% |
| ! | TAAAGATAACACTTCTAACA+AGG | + | chr7_1:79951-79970 | Msa1003060:intron | 25.0% |
| ! | AAAGATAACACTTCTAACAA+GGG | + | chr7_1:79952-79971 | Msa1003060:intron | 25.0% |
| ! | ACATTATTGAGCAATTACAA+AGG | + | chr7_1:80091-80110 | Msa1003060:intron | 25.0% |
| !!! | TGAGTCAAAGTTAGTTTTTA+TGG | + | chr7_1:80314-80333 | Msa1003060:intron | 25.0% |
| !! | AAATTTCAACTATAATGGAG+AGG | + | chr7_1:80598-80617 | Msa1003060:intron | 25.0% |
| !! | AATTTCAACTATAATGGAGA+GGG | + | chr7_1:80599-80618 | Msa1003060:intron | 25.0% |
| ! | ATTATGCTCATGAATTACTA+AGG | + | chr7_1:80733-80752 | Msa1003060:intron | 25.0% |
| !! | GAGAATGTATGTATGTTTTA+AGG | + | chr7_1:80854-80873 | Msa1003060:intron | 25.0% |
| !!! | GAATGTATGTATGTTTTAAG+GGG | + | chr7_1:80856-80875 | Msa1003060:intron | 25.0% |
| ! | AAGCTTCTCATAAATGATTT+GGG | + | chr7_1:81056-81075 | Msa1003060:intron | 25.0% |
| !!! | ATACATTTTGTTTATGCATC+TGG | + | chr7_1:81163-81182 | Msa1003060:intron | 25.0% |
| !!! | AATTTTAGAAAGAGATTTCC+TGG | + | chr7_1:81302-81321 | Msa1003060:CDS | 25.0% |
| !!! | AACTCTTTTAGTTTTTTACC+AGG | - | chr7_1:81323-81342 | None:intergenic | 25.0% |
| ! | AAAATTACAAGGTTTGATGA+TGG | + | chr7_1:81623-81642 | Msa1003060:CDS | 25.0% |
| ! | TTCATTATGCATTAAGTTTC+TGG | + | chr7_1:81832-81851 | Msa1003060:intron | 25.0% |
| ! | ACCTAAAAAGAAAAGAAGAT+TGG | + | chr7_1:82192-82211 | Msa1003060:intron | 25.0% |
| !! | TCCAATCTTCTTTTCTTTTT+AGG | - | chr7_1:82196-82215 | None:intergenic | 25.0% |
| ATTGATGAGAATGAATTGGT+TGG | + | chr7_1:79487-79506 | Msa1003060:CDS | 30.0% | |
| AAGTTGGACAAAATAGTCAT+GGG | + | chr7_1:79557-79576 | Msa1003060:CDS | 30.0% | |
| ! | AATGACTTTGGATTTGACTT+TGG | + | chr7_1:79700-79719 | Msa1003060:CDS | 30.0% |
| ! | ATGACTTTGGATTTGACTTT+GGG | + | chr7_1:79701-79720 | Msa1003060:CDS | 30.0% |
| AAGATAACACTTCTAACAAG+GGG | + | chr7_1:79953-79972 | Msa1003060:intron | 30.0% | |
| !!! | TTTCCTGGTTGTTTTTTCTT+GGG | - | chr7_1:80051-80070 | None:intergenic | 30.0% |
| !!! | TTTTCCTGGTTGTTTTTTCT+TGG | - | chr7_1:80052-80071 | None:intergenic | 30.0% |
| ATAATGTCATCTTCAAACAC+AGG | - | chr7_1:80078-80097 | None:intergenic | 30.0% | |
| AATTCTGATGACTTGAATAG+TGG | + | chr7_1:80192-80211 | Msa1003060:intron | 30.0% | |
| !! | CATTTTGAAAGTTGGGAATT+TGG | - | chr7_1:80250-80269 | None:intergenic | 30.0% |
| !! | TATCTGGCATTTTGAAAGTT+GGG | - | chr7_1:80257-80276 | None:intergenic | 30.0% |
| !! | TTATCTGGCATTTTGAAAGT+TGG | - | chr7_1:80258-80277 | None:intergenic | 30.0% |
| CAAAATGCCAGATAAAATGA+AGG | + | chr7_1:80263-80282 | Msa1003060:intron | 30.0% | |
| AATGAAGGATTATAAATGGG+AGG | + | chr7_1:80278-80297 | Msa1003060:intron | 30.0% | |
| AGAATGATAAAGAAAGAGTG+AGG | + | chr7_1:80388-80407 | Msa1003060:intron | 30.0% | |
| GAATGATAAAGAAAGAGTGA+GGG | + | chr7_1:80389-80408 | Msa1003060:intron | 30.0% | |
| AATTCATCAAACTCACATTG+TGG | - | chr7_1:80524-80543 | None:intergenic | 30.0% | |
| TGAGTTTGATGAATTCTAGA+TGG | + | chr7_1:80529-80548 | Msa1003060:intron | 30.0% | |
| TTGATGAATTCTAGATGGTT+AGG | + | chr7_1:80534-80553 | Msa1003060:intron | 30.0% | |
| GAGAAGTGGAATATTCAAAT+GGG | + | chr7_1:80627-80646 | Msa1003060:intron | 30.0% | |
| TAATCTTGACAGTTGAATGA+GGG | - | chr7_1:80764-80783 | None:intergenic | 30.0% | |
| TAGGACAAACTATTGCATTT+GGG | - | chr7_1:80827-80846 | None:intergenic | 30.0% | |
| !! | ACATACATTCTCTGAAATCT+AGG | - | chr7_1:80846-80865 | None:intergenic | 30.0% |
| TTCAAATGCAGAAAGATCAT+TGG | + | chr7_1:80894-80913 | Msa1003060:intron | 30.0% | |
| TCAAATGCAGAAAGATCATT+GGG | + | chr7_1:80895-80914 | Msa1003060:intron | 30.0% | |
| !! | ATTGGAAGTATTTGGTCATT+TGG | - | chr7_1:80984-81003 | None:intergenic | 30.0% |
| !! | CAAATGCAATTGGAAGTATT+TGG | - | chr7_1:80992-81011 | None:intergenic | 30.0% |
| AATCATTTATGAGAAGCTTC+AGG | - | chr7_1:81055-81074 | None:intergenic | 30.0% | |
| GAAGCTTCTCATAAATGATT+TGG | + | chr7_1:81055-81074 | Msa1003060:intron | 30.0% | |
| AAAGGAGATGAAGGAAATTA+AGG | + | chr7_1:81385-81404 | Msa1003060:CDS | 30.0% | |
| AATCACAATGACAGAGTTAA+AGG | - | chr7_1:81525-81544 | None:intergenic | 30.0% | |
| AGAATAGGCAGAAAATTACA+AGG | + | chr7_1:81612-81631 | Msa1003060:CDS | 30.0% | |
| ! | TCTAGCTTCTTCTTGATATT+TGG | - | chr7_1:81659-81678 | None:intergenic | 30.0% |
| TATCAAGAAGAAGCTAGAAA+AGG | + | chr7_1:81661-81680 | Msa1003060:CDS | 30.0% | |
| AAGAAAATAAACCAGAAACC+AGG | - | chr7_1:81861-81880 | None:intergenic | 30.0% | |
| !!! | GGTTTCTGGTTTATTTTCTT+AGG | + | chr7_1:81861-81880 | Msa1003060:intron | 30.0% |
| !! | TTTATTTTCTTAGGCAAGGT+GGG | + | chr7_1:81870-81889 | Msa1003060:intron | 30.0% |
| AACTTGATAAATGGATCACT+TGG | - | chr7_1:81907-81926 | None:intergenic | 30.0% | |
| ! | TTTGTGTTTTATGCAAGCAA+TGG | - | chr7_1:82014-82033 | None:intergenic | 30.0% |
| ATATGCTTCTTTCTTGTAGA+TGG | - | chr7_1:82065-82084 | None:intergenic | 30.0% | |
| !! | TTGGTTGGTGAGTATGATAA+TGG | + | chr7_1:79502-79521 | Msa1003060:CDS | 35.0% |
| !! | TGGTTGGTGAGTATGATAAT+GGG | + | chr7_1:79503-79522 | Msa1003060:CDS | 35.0% |
| GAAGTTGGACAAAATAGTCA+TGG | + | chr7_1:79556-79575 | Msa1003060:CDS | 35.0% | |
| CTAGGGAATGAAAATGACTT+TGG | + | chr7_1:79688-79707 | Msa1003060:CDS | 35.0% | |
| ! | TTTGGATTTGACTTTGGGTT+AGG | + | chr7_1:79706-79725 | Msa1003060:CDS | 35.0% |
| ! | TTGGATTTGACTTTGGGTTA+GGG | + | chr7_1:79707-79726 | Msa1003060:CDS | 35.0% |
| TGTTGTGAATCAAACTGAAG+TGG | + | chr7_1:79903-79922 | Msa1003060:CDS | 35.0% | |
| GTTGTGAATCAAACTGAAGT+GGG | + | chr7_1:79904-79923 | Msa1003060:CDS | 35.0% | |
| TCTCAGAAGAAGAGTAAAAC+TGG | + | chr7_1:80000-80019 | Msa1003060:intron | 35.0% | |
| CTCAGAAGAAGAGTAAAACT+GGG | + | chr7_1:80001-80020 | Msa1003060:intron | 35.0% | |
| AAGAAGAGTAAAACTGGGAA+GGG | + | chr7_1:80006-80025 | Msa1003060:intron | 35.0% | |
| AAGGATTATAAATGGGAGGT+TGG | + | chr7_1:80282-80301 | Msa1003060:intron | 35.0% | |
| ATGGAAGCAATGAGAACTTA+TGG | + | chr7_1:80333-80352 | Msa1003060:intron | 35.0% | |
| GGAGAAGTGGAATATTCAAA+TGG | + | chr7_1:80626-80645 | Msa1003060:intron | 35.0% | |
| AGTGGAATATTCAAATGGGT+AGG | + | chr7_1:80631-80650 | Msa1003060:intron | 35.0% | |
| !! | TATGCAGTGGAATTTGTTGA+AGG | + | chr7_1:80678-80697 | Msa1003060:intron | 35.0% |
| !! | ATGCAGTGGAATTTGTTGAA+GGG | + | chr7_1:80679-80698 | Msa1003060:intron | 35.0% |
| !! | GCTTTAGAGATCAATACACA+AGG | + | chr7_1:80703-80722 | Msa1003060:intron | 35.0% |
| GTAATCTTGACAGTTGAATG+AGG | - | chr7_1:80765-80784 | None:intergenic | 35.0% | |
| ATTACATCAACCCCATATGA+AGG | + | chr7_1:80780-80799 | Msa1003060:intron | 35.0% | |
| CTAGGACAAACTATTGCATT+TGG | - | chr7_1:80828-80847 | None:intergenic | 35.0% | |
| TCAACAACTGCAAATGCAAT+TGG | - | chr7_1:81002-81021 | None:intergenic | 35.0% | |
| ATTGCATTTGCAGTTGTTGA+AGG | + | chr7_1:81002-81021 | Msa1003060:intron | 35.0% | |
| ! | CTTCTCATAAATGATTTGGG+AGG | + | chr7_1:81059-81078 | Msa1003060:intron | 35.0% |
| !! | TATTGATTTGTTGCTTCCTG+AGG | + | chr7_1:81244-81263 | Msa1003060:CDS | 35.0% |
| AGCATTTCTGTATGTAGCTT+TGG | - | chr7_1:81360-81379 | None:intergenic | 35.0% | |
| AAGCTACATACAGAAATGCT+TGG | + | chr7_1:81360-81379 | Msa1003060:CDS | 35.0% | |
| AGCTACATACAGAAATGCTT+GGG | + | chr7_1:81361-81380 | Msa1003060:CDS | 35.0% | |
| ATACAGAAATGCTTGGGAAA+AGG | + | chr7_1:81367-81386 | Msa1003060:CDS | 35.0% | |
| GGAAATTAAGGCTATAAGTG+AGG | + | chr7_1:81397-81416 | Msa1003060:CDS | 35.0% | |
| AATTAAGGCTATAAGTGAGG+AGG | + | chr7_1:81400-81419 | Msa1003060:CDS | 35.0% | |
| TGGATCTATTTCACACAGAT+AGG | - | chr7_1:81432-81451 | None:intergenic | 35.0% | |
| GTGAAATAGATCCAAGACAT+TGG | + | chr7_1:81438-81457 | Msa1003060:CDS | 35.0% | |
| ! | TGGACTAGGTCAATGTTTAA+AGG | + | chr7_1:81458-81477 | Msa1003060:CDS | 35.0% |
| ! | TATCCATGATGGAGGATATA+AGG | + | chr7_1:81564-81583 | Msa1003060:CDS | 35.0% |
| AATCCTTATATCCTCCATCA+TGG | - | chr7_1:81570-81589 | None:intergenic | 35.0% | |
| TAAGGATTTATGTCATGCAG+AGG | + | chr7_1:81582-81601 | Msa1003060:CDS | 35.0% | |
| !! | CTGGTTTATTTTCTTAGGCA+AGG | + | chr7_1:81866-81885 | Msa1003060:intron | 35.0% |
| !! | GTTTATTTTCTTAGGCAAGG+TGG | + | chr7_1:81869-81888 | Msa1003060:intron | 35.0% |
| ! | TTATTTTCTTAGGCAAGGTG+GGG | + | chr7_1:81871-81890 | Msa1003060:intron | 35.0% |
| GTGATCCATTTATCAAGTTC+TGG | + | chr7_1:81908-81927 | Msa1003060:intron | 35.0% | |
| TGTCTCCAGAACTTGATAAA+TGG | - | chr7_1:81916-81935 | None:intergenic | 35.0% | |
| CAGCTATCAAAAAACAACCT+GGG | + | chr7_1:82167-82186 | Msa1003060:intron | 35.0% | |
| !! | CAAATGAAGAGAGCATCATA+TGG | + | chr7_1:82244-82263 | Msa1003060:intron | 35.0% |
| CATATGGAATCAAATGCAGT+AGG | + | chr7_1:82260-82279 | Msa1003060:intron | 35.0% | |
| !! | AGAAGCAAAAAGCATCAACT+AGG | + | chr7_1:82566-82585 | Msa1003060:CDS | 35.0% |
| AACTAGGAAGAGAAAGGTTA+AGG | + | chr7_1:82582-82601 | Msa1003060:CDS | 35.0% | |
| ATGCTCCAACTAAGAAGATA+AGG | + | chr7_1:82656-82675 | Msa1003060:CDS | 35.0% | |
| TGCTCCAACTAAGAAGATAA+GGG | + | chr7_1:82657-82676 | Msa1003060:CDS | 35.0% | |
| TTGAGTGTACACATGCTGAT+GGG | + | chr7_1:79431-79450 | Msa1003060:CDS | 40.0% | |
| !! | TATGATAATGGGCCTGGATT+AGG | + | chr7_1:79514-79533 | Msa1003060:CDS | 40.0% |
| ! | ATAGTTTCCTTCTCTAGCTC+AGG | - | chr7_1:79583-79602 | None:intergenic | 40.0% |
| GGAAACTATGAATGTGAGTG+AGG | + | chr7_1:79594-79613 | Msa1003060:CDS | 40.0% | |
| ACATTCACAGTTTCTTCCAC+TGG | - | chr7_1:79622-79641 | None:intergenic | 40.0% | |
| AGTGGAAGAAACTGTGAATG+TGG | + | chr7_1:79621-79640 | Msa1003060:CDS | 40.0% | |
| GTGGAAGAAACTGTGAATGT+GGG | + | chr7_1:79622-79641 | Msa1003060:CDS | 40.0% | |
| ! | TGGGTTAGGGAATGAAAATG+AGG | + | chr7_1:79720-79739 | Msa1003060:CDS | 40.0% |
| AGGGAATGAAAATGAGGATC+TGG | + | chr7_1:79726-79745 | Msa1003060:CDS | 40.0% | |
| AATGAAAATGAGGATCTGGC+TGG | + | chr7_1:79730-79749 | Msa1003060:CDS | 40.0% | |
| CTCACCAAAATCTACACCAA+GGG | - | chr7_1:79773-79792 | None:intergenic | 40.0% | |
| ACTCACCAAAATCTACACCA+AGG | - | chr7_1:79774-79793 | None:intergenic | 40.0% | |
| AATCAAACTGAAGTGGGTGA+AGG | + | chr7_1:79910-79929 | Msa1003060:CDS | 40.0% | |
| ACACTTCTAACAAGGGGAAA+AGG | + | chr7_1:79959-79978 | Msa1003060:intron | 40.0% | |
| TAACAAGGGGAAAAGGAAGA+AGG | + | chr7_1:79966-79985 | Msa1003060:intron | 40.0% | |
| AACAAGGGGAAAAGGAAGAA+GGG | + | chr7_1:79967-79986 | Msa1003060:intron | 40.0% | |
| GAAGAAGAGTAAAACTGGGA+AGG | + | chr7_1:80005-80024 | Msa1003060:intron | 40.0% | |
| AGAAGAGTAAAACTGGGAAG+GGG | + | chr7_1:80007-80026 | Msa1003060:intron | 40.0% | |
| AGACCCAAGAAAAAACAACC+AGG | + | chr7_1:80045-80064 | Msa1003060:intron | 40.0% | |
| ! | TCAAACACAGGATCTTTTCC+TGG | - | chr7_1:80066-80085 | None:intergenic | 40.0% |
| AGAACTTATGGAGTACACTC+TGG | + | chr7_1:80345-80364 | Msa1003060:intron | 40.0% | |
| ! | TTATGGAGTACACTCTGGAA+GGG | + | chr7_1:80350-80369 | Msa1003060:intron | 40.0% |
| GATAAAGAAAGAGTGAGGGT+TGG | + | chr7_1:80393-80412 | Msa1003060:intron | 40.0% | |
| GCATTCTGTGCTAAAATACC+TGG | + | chr7_1:80441-80460 | Msa1003060:intron | 40.0% | |
| AAATACCTGGTGAAGAGACA+TGG | + | chr7_1:80454-80473 | Msa1003060:intron | 40.0% | |
| TAGGTGCTAAACTTCATGCA+AGG | + | chr7_1:80553-80572 | Msa1003060:intron | 40.0% | |
| AGGTGCTAAACTTCATGCAA+GGG | + | chr7_1:80554-80573 | Msa1003060:intron | 40.0% | |
| ! | AACTATAATGGAGAGGGTTC+AGG | + | chr7_1:80605-80624 | Msa1003060:intron | 40.0% |
| ! | TAGAGCAAAGAAGTATGCAG+TGG | + | chr7_1:80665-80684 | Msa1003060:intron | 40.0% |
| ! | CTATTGCATTTGGGTTCTCT+AGG | - | chr7_1:80818-80837 | None:intergenic | 40.0% |
| !!! | TGTATGTTTTAAGGGGTGCA+TGG | + | chr7_1:80863-80882 | Msa1003060:intron | 40.0% |
| AGAAAGATCATTGGGCTTGA+TGG | + | chr7_1:80903-80922 | Msa1003060:intron | 40.0% | |
| ! | CTTGATGGTTGCTTCCTTAA+GGG | + | chr7_1:80918-80937 | Msa1003060:intron | 40.0% |
| ! | TTGATGGTTGCTTCCTTAAG+GGG | + | chr7_1:80919-80938 | Msa1003060:intron | 40.0% |
| GTCATTTGGATCCATTCCAA+TGG | - | chr7_1:80970-80989 | None:intergenic | 40.0% | |
| AAGGAGAGACTAAAGAGTCT+TGG | + | chr7_1:81021-81040 | Msa1003060:intron | 40.0% | |
| AGACTAAAGAGTCTTGGACA+TGG | + | chr7_1:81027-81046 | Msa1003060:intron | 40.0% | |
| CTTCTGTTGATCACTGATGA+TGG | - | chr7_1:81108-81127 | None:intergenic | 40.0% | |
| CATCATCAGTGATCAACAGA+AGG | + | chr7_1:81106-81125 | Msa1003060:intron | 40.0% | |
| GGAAGCAACAAATCAATAGC+TGG | - | chr7_1:81242-81261 | None:intergenic | 40.0% | |
| TAGATCCAAGACATTGGACT+AGG | + | chr7_1:81444-81463 | Msa1003060:CDS | 40.0% | |
| ATTGACCTAGTCCAATGTCT+TGG | - | chr7_1:81452-81471 | None:intergenic | 40.0% | |
| ACTCTGTCATTGTGATTCCA+AGG | + | chr7_1:81528-81547 | Msa1003060:CDS | 40.0% | |
| GATTTATGTCATGCAGAGGT+GGG | + | chr7_1:81586-81605 | Msa1003060:CDS | 40.0% | |
| !! | GCATTAAGTTTCTGGTTTCC+TGG | + | chr7_1:81840-81859 | Msa1003060:intron | 40.0% |
| GCTTCTTTCTTGTAGATGGA+TGG | - | chr7_1:82061-82080 | None:intergenic | 40.0% | |
| AGCATGATATATCCTGCCAA+TGG | + | chr7_1:82100-82119 | Msa1003060:intron | 40.0% | |
| ! | CATCCACAGATTTTGTCCAT+TGG | - | chr7_1:82119-82138 | None:intergenic | 40.0% |
| ATGGACAAAATCTGTGGATG+AGG | + | chr7_1:82119-82138 | Msa1003060:intron | 40.0% | |
| !!! | GGTTGTTTTTTGATAGCTGG+TGG | - | chr7_1:82166-82185 | None:intergenic | 40.0% |
| !!! | CCAGGTTGTTTTTTGATAGC+TGG | - | chr7_1:82169-82188 | None:intergenic | 40.0% |
| CCAGCTATCAAAAAACAACC+TGG | + | chr7_1:82166-82185 | Msa1003060:intron | 40.0% | |
| !!! | CTTTTCTTTTTAGGTCTCCC+AGG | - | chr7_1:82187-82206 | None:intergenic | 40.0% |
| ! | AGTTAGCTTCTCAGAGATAG+TGG | + | chr7_1:82220-82239 | Msa1003060:intron | 40.0% |
| TGAGTTTGAGTCTCTGATTC+AGG | - | chr7_1:82352-82371 | None:intergenic | 40.0% | |
| AATCAAGCTTCTCAGGTTCA+GGG | + | chr7_1:82463-82482 | Msa1003060:CDS | 40.0% | |
| !! | CTTTTTGCTTCTGAGAAGCT+TGG | - | chr7_1:82558-82577 | None:intergenic | 40.0% |
| AGCATCAACTAGGAAGAGAA+AGG | + | chr7_1:82576-82595 | Msa1003060:CDS | 40.0% | |
| !!! | CTTTTGAGTTGGTGGAATCT+GGG | - | chr7_1:82632-82651 | None:intergenic | 40.0% |
| !!! | GCATTTTGCTTTTGAGTTGG+TGG | - | chr7_1:82640-82659 | None:intergenic | 40.0% |
| !! | GGAGCATTTTGCTTTTGAGT+TGG | - | chr7_1:82643-82662 | None:intergenic | 40.0% |
| CTAGCCCTTATCTTCTTAGT+TGG | - | chr7_1:82664-82683 | None:intergenic | 40.0% | |
| !! | AATGCTGATGGTGGTGTAAC+TGG | + | chr7_1:79394-79413 | Msa1003060:CDS | 45.0% |
| GCATGTGTACACTCAACAGT+GGG | - | chr7_1:79427-79446 | None:intergenic | 45.0% | |
| AGCATGTGTACACTCAACAG+TGG | - | chr7_1:79428-79447 | None:intergenic | 45.0% | |
| GTTGAGTGTACACATGCTGA+TGG | + | chr7_1:79430-79449 | Msa1003060:CDS | 45.0% | |
| TGGTCATTTAAGTCCACCTC+AGG | - | chr7_1:79457-79476 | None:intergenic | 45.0% | |
| ! | GAGGTGGACTTAAATGACCA+TGG | + | chr7_1:79457-79476 | Msa1003060:CDS | 45.0% |
| TCTCATCAATCATTGGGCCA+TGG | - | chr7_1:79477-79496 | None:intergenic | 45.0% | |
| GTCTCATCATCTCCTAATCC+AGG | - | chr7_1:79529-79548 | None:intergenic | 45.0% | |
| GATGAGACACAGACTGAAGT+TGG | + | chr7_1:79541-79560 | Msa1003060:CDS | 45.0% | |
| AGAAACTGTGAATGTGGGTG+AGG | + | chr7_1:79627-79646 | Msa1003060:CDS | 45.0% | |
| ACATTCACAGTTTCCTCCAC+TGG | - | chr7_1:79655-79674 | None:intergenic | 45.0% | |
| AGTGGAGGAAACTGTGAATG+TGG | + | chr7_1:79654-79673 | Msa1003060:CDS | 45.0% | |
| GTGGAGGAAACTGTGAATGT+GGG | + | chr7_1:79655-79674 | Msa1003060:CDS | 45.0% | |
| ! | TCATTTTCATTCCCTAGCCC+AGG | - | chr7_1:79685-79704 | None:intergenic | 45.0% |
| !! | AGTGCCCTTGGTGTAGATTT+TGG | + | chr7_1:79766-79785 | Msa1003060:CDS | 45.0% |
| ! | TTTTGGTGAGTCAGAAGCAG+AGG | + | chr7_1:79783-79802 | Msa1003060:CDS | 45.0% |
| !! | AGGTGGAATTGGAGTTGATG+TGG | + | chr7_1:79837-79856 | Msa1003060:CDS | 45.0% |
| TGTTGAGACAGAGACTGAAG+TGG | + | chr7_1:79867-79886 | Msa1003060:CDS | 45.0% | |
| GTTGAGACAGAGACTGAAGT+GGG | + | chr7_1:79868-79887 | Msa1003060:CDS | 45.0% | |
| AAACTGGGAAGGGGAAAAAG+AGG | + | chr7_1:80016-80035 | Msa1003060:intron | 45.0% | |
| AGAGACTGCAGTAGCTGATA+GGG | + | chr7_1:80146-80165 | Msa1003060:intron | 45.0% | |
| ! | TAGTGGATCTGAGAGTGATG+AGG | + | chr7_1:80209-80228 | Msa1003060:intron | 45.0% |
| CTTATGGAGTACACTCTGGA+AGG | + | chr7_1:80349-80368 | Msa1003060:intron | 45.0% | |
| ATGCAAGGAAGGATGTCCAT+GGG | + | chr7_1:80416-80435 | Msa1003060:intron | 45.0% | |
| AGAGACATGGCAGTTGAGAA+AGG | + | chr7_1:80467-80486 | Msa1003060:intron | 45.0% | |
| CAGTTGAGAAAGGTTTACCC+TGG | + | chr7_1:80477-80496 | Msa1003060:intron | 45.0% | |
| TGTCACACTCATGATCTCCA+GGG | - | chr7_1:80497-80516 | None:intergenic | 45.0% | |
| ATGTCACACTCATGATCTCC+AGG | - | chr7_1:80498-80517 | None:intergenic | 45.0% | |
| !! | AACCCCATATGAAGGTACTG+AGG | + | chr7_1:80788-80807 | Msa1003060:intron | 45.0% |
| AGCCTCAGTACCTTCATATG+GGG | - | chr7_1:80793-80812 | None:intergenic | 45.0% | |
| CAGCCTCAGTACCTTCATAT+GGG | - | chr7_1:80794-80813 | None:intergenic | 45.0% | |
| TCAGCCTCAGTACCTTCATA+TGG | - | chr7_1:80795-80814 | None:intergenic | 45.0% | |
| ! | GCTTGATGGTTGCTTCCTTA+AGG | + | chr7_1:80917-80936 | Msa1003060:intron | 45.0% |
| GCTAGCAACATTCCACCATA+AGG | - | chr7_1:80945-80964 | None:intergenic | 45.0% | |
| TGCTTGGGAAAAGGAGATGA+AGG | + | chr7_1:81376-81395 | Msa1003060:CDS | 45.0% | |
| CATCATGGATACAACTGGCT+TGG | - | chr7_1:81555-81574 | None:intergenic | 45.0% | |
| CAAGCCAGTTGTATCCATGA+TGG | + | chr7_1:81553-81572 | Msa1003060:CDS | 45.0% | |
| TCCTCCATCATGGATACAAC+TGG | - | chr7_1:81560-81579 | None:intergenic | 45.0% | |
| GGATTTATGTCATGCAGAGG+TGG | + | chr7_1:81585-81604 | Msa1003060:CDS | 45.0% | |
| !! | GTTTCTGGTTTCCTGGTTTC+TGG | + | chr7_1:81847-81866 | Msa1003060:intron | 45.0% |
| !! | TGCTGTTAACTTGCAGCAGA+TGG | + | chr7_1:81940-81959 | Msa1003060:intron | 45.0% |
| TGCAGGAAATGGTACTTGAC+AGG | + | chr7_1:81971-81990 | Msa1003060:intron | 45.0% | |
| GCAGGAAATGGTACTTGACA+GGG | + | chr7_1:81972-81991 | Msa1003060:intron | 45.0% | |
| ! | CACAGATTTTGTCCATTGGC+AGG | - | chr7_1:82115-82134 | None:intergenic | 45.0% |
| CTGCCAATGGACAAAATCTG+TGG | + | chr7_1:82113-82132 | Msa1003060:intron | 45.0% | |
| GATAGCTGGTGGTTGAAGAT+CGG | - | chr7_1:82155-82174 | None:intergenic | 45.0% | |
| GTTTGAGTCTCTGATTCAGG+AGG | - | chr7_1:82349-82368 | None:intergenic | 45.0% | |
| TGAGTCTCAACTTGTGCTTG+AGG | - | chr7_1:82388-82407 | None:intergenic | 45.0% | |
| ! | GTTTGAGTCTGAGATACCTG+TGG | - | chr7_1:82421-82440 | None:intergenic | 45.0% |
| TGCTCAGAATCAAGCTTCTC+AGG | + | chr7_1:82456-82475 | Msa1003060:CDS | 45.0% | |
| GAATCAAGCTTCTCAGGTTC+AGG | + | chr7_1:82462-82481 | Msa1003060:CDS | 45.0% | |
| TAATCAGAGCCAAGCTTCTC+AGG | + | chr7_1:82501-82520 | Msa1003060:CDS | 45.0% | |
| GAAGTTTGTGACTGAGTAGC+TGG | - | chr7_1:82610-82629 | None:intergenic | 45.0% | |
| !!! | GCTTTTGAGTTGGTGGAATC+TGG | - | chr7_1:82633-82652 | None:intergenic | 45.0% |
| !!! | CCTGGCTTTGCAGATTGTTT+TGG | - | chr7_1:82709-82728 | None:intergenic | 45.0% |
| CCAAAACAATCTGCAAAGCC+AGG | + | chr7_1:82706-82725 | Msa1003060:CDS | 45.0% | |
| TTCTTTCTCCTCTTGTCTCC+TGG | - | chr7_1:82727-82746 | None:intergenic | 45.0% | |
| AGGAGACAAGAGGAGAAAGA+AGG | + | chr7_1:82726-82745 | Msa1003060:CDS | 45.0% | |
| GGAGACAAGAGGAGAAAGAA+GGG | + | chr7_1:82727-82746 | Msa1003060:CDS | 45.0% | |
| GGTGAGGGTTCAAATGCTGA+TGG | + | chr7_1:79382-79401 | Msa1003060:CDS | 50.0% | |
| GAGGGTTCAAATGCTGATGG+TGG | + | chr7_1:79385-79404 | Msa1003060:CDS | 50.0% | |
| ! | GATGGTGGTGTAACTGGTGT+AGG | + | chr7_1:79400-79419 | Msa1003060:CDS | 50.0% |
| !! | GGTGAGTATGATAATGGGCC+TGG | + | chr7_1:79508-79527 | Msa1003060:CDS | 50.0% |
| AGCAGGAGACTTAGACAGTG+AGG | + | chr7_1:79813-79832 | Msa1003060:CDS | 50.0% | |
| GGAGACTTAGACAGTGAGGT+AGG | + | chr7_1:79817-79836 | Msa1003060:CDS | 50.0% | |
| GACTTAGACAGTGAGGTAGG+TGG | + | chr7_1:79820-79839 | Msa1003060:CDS | 50.0% | |
| GACAGTGAGGTAGGTGGAAT+TGG | + | chr7_1:79826-79845 | Msa1003060:CDS | 50.0% | |
| AAGTGGGTGAAGGATCTGTG+AGG | + | chr7_1:79920-79939 | Msa1003060:CDS | 50.0% | |
| AGTGGGTGAAGGATCTGTGA+GGG | + | chr7_1:79921-79940 | Msa1003060:CDS | 50.0% | |
| TGAAGGATCTGTGAGGGTAG+AGG | + | chr7_1:79927-79946 | Msa1003060:intron | 50.0% | |
| GAAGGATCTGTGAGGGTAGA+GGG | + | chr7_1:79928-79947 | Msa1003060:intron | 50.0% | |
| AAGGGGAAAAGGAAGAAGGG+AGG | + | chr7_1:79970-79989 | Msa1003060:intron | 50.0% | |
| GGGAAGGGGAAAAAGAGGAA+AGG | + | chr7_1:80021-80040 | Msa1003060:intron | 50.0% | |
| CAGAGACTGCAGTAGCTGAT+AGG | + | chr7_1:80145-80164 | Msa1003060:intron | 50.0% | |
| GAGACTGCAGTAGCTGATAG+GGG | + | chr7_1:80147-80166 | Msa1003060:intron | 50.0% | |
| GGATCTGAGAGTGATGAGGA+TGG | + | chr7_1:80213-80232 | Msa1003060:intron | 50.0% | |
| AAGAGTGAGGGTTGGATGCA+AGG | + | chr7_1:80401-80420 | Msa1003060:intron | 50.0% | |
| GATGCAAGGAAGGATGTCCA+TGG | + | chr7_1:80415-80434 | Msa1003060:intron | 50.0% | |
| TTAGCACAGAATGCCTCCCA+TGG | - | chr7_1:80435-80454 | None:intergenic | 50.0% | |
| AACTGCCATGTCTCTTCACC+AGG | - | chr7_1:80462-80481 | None:intergenic | 50.0% | |
| TGCTTCCTTAAGGGGCCTTA+TGG | + | chr7_1:80927-80946 | Msa1003060:intron | 50.0% | |
| ! | TTCCTTAAGGGGCCTTATGG+TGG | + | chr7_1:80930-80949 | Msa1003060:intron | 50.0% |
| TTCCACCATAAGGCCCCTTA+AGG | - | chr7_1:80935-80954 | None:intergenic | 50.0% | |
| GGAATGTTGCTAGCTGCCAT+TGG | + | chr7_1:80951-80970 | Msa1003060:intron | 50.0% | |
| GTTGCTAGCTGCCATTGGAA+TGG | + | chr7_1:80956-80975 | Msa1003060:intron | 50.0% | |
| CAAAACCTCTGCTCAACCTC+AGG | - | chr7_1:81263-81282 | None:intergenic | 50.0% | |
| !! | GATACAACTGGCTTGGACCT+TGG | - | chr7_1:81548-81567 | None:intergenic | 50.0% |
| GCCAGTTGTATCCATGATGG+AGG | + | chr7_1:81556-81575 | Msa1003060:CDS | 50.0% | |
| TGCAGAGGTGGGAGAAGAAT+AGG | + | chr7_1:81597-81616 | Msa1003060:CDS | 50.0% | |
| TGGTGTGTGACTGCAGGAAA+TGG | + | chr7_1:81960-81979 | Msa1003060:intron | 50.0% | |
| CAAGCAATGGCATGACAGCA+TGG | - | chr7_1:82001-82020 | None:intergenic | 50.0% | |
| TGCAGTAGGTGCAAGCAATG+TGG | + | chr7_1:82274-82293 | Msa1003060:intron | 50.0% | |
| TGAGTCTCTGATTCAGGAGG+TGG | - | chr7_1:82346-82365 | None:intergenic | 50.0% | |
| ACTTGTGCTTGAGGCTGAGA+TGG | - | chr7_1:82379-82398 | None:intergenic | 50.0% | |
| AGCCAAGCTTCTCAGGTTCA+GGG | + | chr7_1:82508-82527 | Msa1003060:CDS | 50.0% | |
| TACCCTGAACCTGAGAAGCT+TGG | - | chr7_1:82468-82487 | None:intergenic | 50.0% | |
| GACAAGAGGAGAAAGAAGGG+AGG | + | chr7_1:82730-82749 | Msa1003060:CDS | 50.0% | |
| ! | TACACATGCTGATGGGCCTG+AGG | + | chr7_1:79438-79457 | Msa1003060:CDS | 55.0% |
| TCATGGGCCTGAGCTAGAGA+AGG | + | chr7_1:79573-79592 | Msa1003060:CDS | 55.0% | |
| ! | GAATGTGAGTGAGGCACCAG+TGG | + | chr7_1:79603-79622 | Msa1003060:CDS | 55.0% |
| ACTGTGAATGTGGGTGAGCC+TGG | + | chr7_1:79664-79683 | Msa1003060:CDS | 55.0% | |
| CTGTGAATGTGGGTGAGCCT+GGG | + | chr7_1:79665-79684 | Msa1003060:CDS | 55.0% | |
| TGAGGATCTGGCTGGTGAGA+AGG | + | chr7_1:79738-79757 | Msa1003060:CDS | 55.0% | |
| GAGAAGGAAGACAGTGCCCT+TGG | + | chr7_1:79754-79773 | Msa1003060:CDS | 55.0% | |
| TGGTGAGTCAGAAGCAGAGG+TGG | + | chr7_1:79786-79805 | Msa1003060:CDS | 55.0% | |
| GGTGAGTCAGAAGCAGAGGT+GGG | + | chr7_1:79787-79806 | Msa1003060:CDS | 55.0% | |
| GAAGCAGAGGTGGGAATAGC+AGG | + | chr7_1:79796-79815 | Msa1003060:CDS | 55.0% | |
| GTGAGGGTTGGATGCAAGGA+AGG | + | chr7_1:80405-80424 | Msa1003060:intron | 55.0% | |
| CAAGGAAGGATGTCCATGGG+AGG | + | chr7_1:80419-80438 | Msa1003060:intron | 55.0% | |
| TGGAGAGGGTTCAGGAGAAG+TGG | + | chr7_1:80613-80632 | Msa1003060:intron | 55.0% | |
| TGCTTCCTGAGGTTGAGCAG+AGG | + | chr7_1:81255-81274 | Msa1003060:CDS | 55.0% | |
| AGCAGATGGTGTGTGACTGC+AGG | + | chr7_1:81954-81973 | Msa1003060:intron | 55.0% | |
| TCTGATTCAGGAGGTGGAGG+TGG | - | chr7_1:82340-82359 | None:intergenic | 55.0% | |
| GTCTCTGATTCAGGAGGTGG+AGG | - | chr7_1:82343-82362 | None:intergenic | 55.0% | |
| GACTCAAACCAGTCAGCCAC+AGG | + | chr7_1:82402-82421 | Msa1003060:CDS | 55.0% | |
| CTGAGATACCTGTGGCTGAC+TGG | - | chr7_1:82413-82432 | None:intergenic | 55.0% | |
| GAGCCAAGCTTCTCAGGTTC+AGG | + | chr7_1:82507-82526 | Msa1003060:CDS | 55.0% | |
| CTGCAAAGCCAGGAGACAAG+AGG | + | chr7_1:82716-82735 | Msa1003060:CDS | 55.0% | |
| GAACCCTCACCCTCAGCAGT+GGG | - | chr7_1:79373-79392 | None:intergenic | 60.0% | |
| TGAACCCTCACCCTCAGCAG+TGG | - | chr7_1:79374-79393 | None:intergenic | 60.0% | |
| ! | ACATGCTGATGGGCCTGAGG+TGG | + | chr7_1:79441-79460 | Msa1003060:CDS | 60.0% |
| ! | GAATGTGGGTGAGGCACCAG+TGG | + | chr7_1:79636-79655 | Msa1003060:CDS | 60.0% |
| AATGTGGGTGAGCCTGGGCT+AGG | + | chr7_1:79670-79689 | Msa1003060:CDS | 60.0% | |
| ATGTGGGTGAGCCTGGGCTA+GGG | + | chr7_1:79671-79690 | Msa1003060:CDS | 60.0% | |
| GATTCAGGAGGTGGAGGTGG+AGG | - | chr7_1:82337-82356 | None:intergenic | 60.0% | |
| ! | TGTGGGTGAGGCACCAGTGG+AGG | + | chr7_1:79639-79658 | Msa1003060:CDS | 65.0% |
| ! | GAGGTGGAGGTGCAGGCAGT+GGG | - | chr7_1:82318-82337 | None:intergenic | 65.0% |
| TCAGGAGGTGGAGGTGGAGG+TGG | - | chr7_1:82334-82353 | None:intergenic | 65.0% | |
| ! | GGAGGTGGAGGTGCAGGCAG+TGG | - | chr7_1:82319-82338 | None:intergenic | 70.0% |
| ! | GGAGGTGGAGGTGGAGGTGC+AGG | - | chr7_1:82325-82344 | None:intergenic | 70.0% |
| GGAGGTGGAGGTGGAGGTGG+AGG | - | chr7_1:82331-82350 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 79370 | 82774 | 79370 | ID=Msa1003060;Name=Msa1003060 |
| chr7_1 | mRNA | 79370 | 82774 | 79370 | ID=Msa1003060-mRNA-1;Parent=Msa1003060;Name=Msa1003060-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|1|1|1|3|0|517 |
| chr7_1 | exon | 79370 | 79942 | 79370 | ID=Msa1003060-mRNA-1:exon:3;Parent=Msa1003060-mRNA-1 |
| chr7_1 | exon | 81230 | 81714 | 81230 | ID=Msa1003060-mRNA-1:exon:4;Parent=Msa1003060-mRNA-1 |
| chr7_1 | exon | 82279 | 82774 | 82279 | ID=Msa1003060-mRNA-1:exon:5;Parent=Msa1003060-mRNA-1 |
| chr7_1 | CDS | 79370 | 79942 | 79370 | ID=Msa1003060-mRNA-1:cds;Parent=Msa1003060-mRNA-1 |
| chr7_1 | CDS | 81230 | 81714 | 81230 | ID=Msa1003060-mRNA-1:cds;Parent=Msa1003060-mRNA-1 |
| chr7_1 | CDS | 82279 | 82774 | 82279 | ID=Msa1003060-mRNA-1:cds;Parent=Msa1003060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
