Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0094960 | XP_003597843.1 | 98.660 | 373 | 5 | 0 | 1 | 373 | 1 | 373 | 0.0 | 764 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0094960 | G7IMH9 | 98.660 | 373 | 5 | 0 | 1 | 373 | 1 | 373 | 0.0 | 764 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0031120 | Msa0094960 | 0.817991 | 2.474468e-52 | -8.615850e-47 |
| Msa0094960 | Msa0173250 | 0.806261 | 8.964996e-50 | -8.615850e-47 |
| Msa0094960 | Msa0226640 | 0.864484 | 1.176124e-64 | -8.615850e-47 |
| Msa0094960 | Msa0228540 | 0.811289 | 7.543319e-51 | -8.615850e-47 |
| Msa0094960 | Msa0260250 | 0.963400 | 4.871183e-122 | -8.615850e-47 |
| Msa0094960 | Msa0260290 | 0.963476 | 3.936340e-122 | -8.615850e-47 |
| Msa0094960 | Msa0304250 | 0.990042 | 8.530809e-181 | -8.615850e-47 |
| Msa0094960 | Msa0495620 | 0.807274 | 5.475167e-50 | -8.615850e-47 |
| Msa0094960 | Msa0550400 | 0.852768 | 3.717882e-61 | -8.615850e-47 |
| Msa0094960 | Msa0605900 | 0.817830 | 2.689772e-52 | -8.615850e-47 |
| Msa0094960 | Msa0646590 | 0.851849 | 6.786709e-61 | -8.615850e-47 |
| Msa0094960 | Msa0686530 | 0.851876 | 6.667238e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0094960 | MtrunA17_Chr2g0332541 | 98.660 | 373 | 5 | 0 | 1 | 373 | 1 | 373 | 0.0 | 764 |
| Msa0094960 | MtrunA17_Chr1g0149051 | 68.661 | 351 | 104 | 2 | 20 | 369 | 31 | 376 | 0.0 | 508 |
| Msa0094960 | MtrunA17_Chr3g0089391 | 50.595 | 336 | 160 | 2 | 26 | 361 | 32 | 361 | 6.07e-119 | 349 |
| Msa0094960 | MtrunA17_Chr4g0019601 | 50.599 | 334 | 159 | 2 | 28 | 361 | 37 | 364 | 3.67e-115 | 339 |
| Msa0094960 | MtrunA17_Chr4g0019581 | 50.000 | 334 | 161 | 2 | 28 | 361 | 106 | 433 | 3.22e-114 | 339 |
| Msa0094960 | MtrunA17_Chr2g0286051 | 45.706 | 361 | 188 | 2 | 3 | 363 | 13 | 365 | 6.28e-113 | 334 |
| Msa0094960 | MtrunA17_Chr4g0019571 | 45.810 | 358 | 188 | 2 | 4 | 361 | 13 | 364 | 2.87e-110 | 327 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0094960 | AT5G11420.1 | 65.014 | 363 | 122 | 1 | 7 | 369 | 9 | 366 | 0.0 | 510 |
| Msa0094960 | AT5G25460.1 | 65.301 | 366 | 122 | 1 | 4 | 369 | 9 | 369 | 1.21e-180 | 506 |
| Msa0094960 | AT4G32460.2 | 64.865 | 370 | 124 | 2 | 1 | 369 | 1 | 365 | 2.57e-178 | 500 |
| Msa0094960 | AT4G32460.1 | 64.865 | 370 | 124 | 2 | 1 | 369 | 1 | 365 | 2.57e-178 | 500 |
| Msa0094960 | AT1G80240.1 | 66.570 | 344 | 110 | 1 | 23 | 366 | 27 | 365 | 2.35e-169 | 477 |
| Msa0094960 | AT4G32460.4 | 67.273 | 330 | 103 | 1 | 40 | 369 | 1 | 325 | 2.54e-165 | 465 |
| Msa0094960 | AT4G32460.3 | 67.273 | 330 | 103 | 1 | 40 | 369 | 1 | 325 | 2.54e-165 | 465 |
| Msa0094960 | AT3G08030.1 | 52.149 | 349 | 160 | 2 | 15 | 361 | 16 | 359 | 1.26e-122 | 358 |
| Msa0094960 | AT2G41800.1 | 48.611 | 360 | 173 | 2 | 15 | 367 | 16 | 370 | 1.27e-120 | 353 |
| Msa0094960 | AT2G41810.1 | 47.011 | 368 | 183 | 2 | 4 | 364 | 5 | 367 | 2.41e-118 | 348 |
| Msa0094960 | AT3G08030.2 | 53.106 | 322 | 146 | 1 | 40 | 361 | 1 | 317 | 2.14e-116 | 341 |
| Msa0094960 | AT2G34510.1 | 47.801 | 341 | 178 | 0 | 23 | 363 | 38 | 378 | 7.66e-113 | 335 |
| Msa0094960 | AT1G29980.1 | 44.928 | 345 | 186 | 1 | 23 | 363 | 38 | 382 | 3.72e-108 | 323 |
| Msa0094960 | AT1G29980.2 | 44.767 | 344 | 186 | 1 | 24 | 363 | 3 | 346 | 8.43e-108 | 321 |
| Msa0094960 | AT2G34510.2 | 47.945 | 292 | 152 | 0 | 72 | 363 | 1 | 292 | 1.59e-97 | 293 |
| Msa0094960 | AT5G14150.2 | 31.746 | 378 | 212 | 14 | 5 | 363 | 7 | 357 | 6.73e-43 | 154 |
| Msa0094960 | AT5G14150.1 | 31.746 | 378 | 212 | 14 | 5 | 363 | 7 | 357 | 6.73e-43 | 154 |
Find 95 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTTAGGTTTGATGCTTT+TGG | 0.196530 | 1_2:+78373463 | None:intergenic |
| TCAAGTTCCTTATCAATCTA+AGG | 0.227907 | 1_2:-78372109 | Msa0094960:CDS |
| TTGTCACTACTGTGCCCTTT+AGG | 0.246643 | 1_2:+78373449 | None:intergenic |
| TGGATAACAATTTCCCCTTC+TGG | 0.270997 | 1_2:+78373094 | None:intergenic |
| AAATTACCTCTGGTTCTTCT+AGG | 0.274083 | 1_2:+78372998 | None:intergenic |
| TATTGATTCTGTTGCCTTGA+AGG | 0.280632 | 1_2:-78373032 | Msa0094960:CDS |
| CCCATGATGCCATACCTAAT+TGG | 0.285226 | 1_2:-78373426 | Msa0094960:CDS |
| ATACCTAATTGGACAGTTTC+AGG | 0.305431 | 1_2:-78373415 | Msa0094960:CDS |
| CAAAAGGTGAAATTAAATAA+AGG | 0.320615 | 1_2:-78373289 | Msa0094960:CDS |
| TATCCTGAAACTGTCCAATT+AGG | 0.329626 | 1_2:+78373412 | None:intergenic |
| AAAACAAGGTGACATGCTTT+TGG | 0.342997 | 1_2:-78373365 | Msa0094960:CDS |
| ACTTCTGAGAAAAGAGATTA+TGG | 0.344578 | 1_2:-78373190 | Msa0094960:CDS |
| CAAGAAGTCTTCACCACAAT+TGG | 0.356227 | 1_2:-78372225 | Msa0094960:CDS |
| AATACTCCCCATGATGCATT+TGG | 0.357606 | 1_2:+78372402 | None:intergenic |
| ACCAGAGTTATCATTCTTCA+TGG | 0.360617 | 1_2:+78372002 | None:intergenic |
| ATTACTTAGGTATGCTTGTT+GGG | 0.366782 | 1_2:+78371928 | None:intergenic |
| CATTACTTAGGTATGCTTGT+TGG | 0.371408 | 1_2:+78371927 | None:intergenic |
| GATAACTCTGGTTCTCTTTG+TGG | 0.379593 | 1_2:-78371991 | Msa0094960:CDS |
| GGCAAAGGAGGGTTTGTTAG+AGG | 0.380600 | 1_2:-78372087 | Msa0094960:CDS |
| TCCAATTAGGTATGGCATCA+TGG | 0.399317 | 1_2:+78373425 | None:intergenic |
| TTCAATACGTGGCAATACTA+TGG | 0.407527 | 1_2:-78371714 | Msa0094960:three_prime_UTR |
| CATCTTCAACACCAGAGTTA+TGG | 0.410007 | 1_2:+78373074 | None:intergenic |
| CTAACAGCATAAGCACCTTC+TGG | 0.410744 | 1_2:+78373337 | None:intergenic |
| AAAAGGTGAAATTAAATAAA+GGG | 0.413489 | 1_2:-78373288 | Msa0094960:CDS |
| CAGAAGGTGCTTATGCTGTT+AGG | 0.416893 | 1_2:-78373336 | Msa0094960:CDS |
| GTTGGGAATCATTTGCTTGT+GGG | 0.420479 | 1_2:-78373132 | Msa0094960:CDS |
| CTACCATACATAGTCTGTAT+TGG | 0.420768 | 1_2:+78373160 | None:intergenic |
| CGACAAGACGTACTAGGATT+AGG | 0.425557 | 1_2:-78372044 | Msa0094960:CDS |
| TTTGATTTGCAACATTACTT+AGG | 0.436219 | 1_2:+78371915 | None:intergenic |
| CTTTCAGGTTTATTGCCAAA+TGG | 0.445556 | 1_2:-78373502 | Msa0094960:intron |
| TACGTTGAATACATAAAATC+AGG | 0.449032 | 1_2:-78373391 | Msa0094960:CDS |
| CCAACTTCAAAGTCACCATT+TGG | 0.454460 | 1_2:+78373487 | None:intergenic |
| TCATGGTGTAAAATGTACTT+AGG | 0.454825 | 1_2:+78372019 | None:intergenic |
| GATGCATTTGGGAACACATA+TGG | 0.455308 | 1_2:+78372414 | None:intergenic |
| AGGCTACGACAAGACGTACT+AGG | 0.457315 | 1_2:-78372050 | Msa0094960:CDS |
| TCAACTATCCATCCTGGTAA+TGG | 0.458492 | 1_2:+78372348 | None:intergenic |
| ATACTCCCCATGATGCATTT+GGG | 0.460441 | 1_2:+78372403 | None:intergenic |
| ATGACTGTAGAAGCATTTGC+TGG | 0.463295 | 1_2:-78372144 | Msa0094960:CDS |
| CCTTTGCCCTTAGATTGATA+AGG | 0.464510 | 1_2:+78372102 | None:intergenic |
| TACCTCTGGTTCTTCTAGGT+GGG | 0.470065 | 1_2:+78373002 | None:intergenic |
| AGAGCAATTGAACTTGTAGC+AGG | 0.483311 | 1_2:-78372267 | Msa0094960:CDS |
| TGAAGCATACATTAAACAAA+AGG | 0.487173 | 1_2:-78373305 | Msa0094960:CDS |
| CCAAAAGCATCAAACCTAAA+GGG | 0.488419 | 1_2:-78373463 | Msa0094960:CDS |
| GATGCTCATGGTCCATTACC+AGG | 0.489743 | 1_2:-78372360 | Msa0094960:CDS |
| TCAATAAGTGGGCCACAAGC+TGG | 0.490288 | 1_2:+78373049 | None:intergenic |
| CCAAATGGTGACTTTGAAGT+TGG | 0.493192 | 1_2:-78373487 | Msa0094960:CDS |
| ATGTGTTCCCAAATGCATCA+TGG | 0.495027 | 1_2:-78372410 | Msa0094960:CDS |
| ATTCCAATACAGACTATGTA+TGG | 0.495208 | 1_2:-78373163 | Msa0094960:CDS |
| TCCAAAAGCATCAAACCTAA+AGG | 0.497345 | 1_2:-78373464 | Msa0094960:CDS |
| CCAATTAGGTATGGCATCAT+GGG | 0.500399 | 1_2:+78373426 | None:intergenic |
| AGGTGGGTTCAAAACCTTCA+AGG | 0.507765 | 1_2:+78373018 | None:intergenic |
| GGTTGGGAATCATTTGCTTG+TGG | 0.513196 | 1_2:-78373133 | Msa0094960:CDS |
| TATGTATGGTAGCAATGGTT+GGG | 0.515899 | 1_2:-78373149 | Msa0094960:CDS |
| TGTGTTCCCAAATGCATCAT+GGG | 0.517111 | 1_2:-78372409 | Msa0094960:CDS |
| CAAGTTCCTTATCAATCTAA+GGG | 0.522342 | 1_2:-78372108 | Msa0094960:CDS |
| ATTCTTGTAATAATATAGCT+AGG | 0.528543 | 1_2:-78371834 | Msa0094960:three_prime_UTR |
| TTACCTCTGGTTCTTCTAGG+TGG | 0.537982 | 1_2:+78373001 | None:intergenic |
| AGAGATTCAACTATCCATCC+TGG | 0.540762 | 1_2:+78372342 | None:intergenic |
| CTATGTATGGTAGCAATGGT+TGG | 0.542393 | 1_2:-78373150 | Msa0094960:CDS |
| GAAATTGTTATCCATAACTC+TGG | 0.550258 | 1_2:-78373085 | Msa0094960:CDS |
| GGTGCTTTGTCTTATACAGA+TGG | 0.550446 | 1_2:-78376222 | Msa0094960:intron |
| AAGGCAACAGAATCAATAAG+TGG | 0.552750 | 1_2:+78373037 | None:intergenic |
| TGAAACTGTCCAATTAGGTA+TGG | 0.554450 | 1_2:+78373417 | None:intergenic |
| TATCAATCTAAGGGCAAAGG+AGG | 0.558454 | 1_2:-78372099 | Msa0094960:CDS |
| ATACTCAACGAGATGGATGA+TGG | 0.558720 | 1_2:+78371878 | None:intergenic |
| AAAATGTAACAATGAGACAT+TGG | 0.564498 | 1_2:+78371669 | None:intergenic |
| TTTAGAGCTGATTATCCAGA+AGG | 0.574156 | 1_2:-78373109 | Msa0094960:CDS |
| CCTTATCAATCTAAGGGCAA+AGG | 0.577087 | 1_2:-78372102 | Msa0094960:CDS |
| GGTGCTTATGCTGTTAGGCT+AGG | 0.577781 | 1_2:-78373331 | Msa0094960:CDS |
| CAGACTATGTATGGTAGCAA+TGG | 0.586345 | 1_2:-78373154 | Msa0094960:CDS |
| CTGTATAAGACAAAGCACCT+TGG | 0.586814 | 1_2:+78376226 | None:intergenic |
| CTCATGGTCCATTACCAGGA+TGG | 0.588455 | 1_2:-78372356 | Msa0094960:CDS |
| GTTGAAGATGATCCAGCTTG+TGG | 0.588645 | 1_2:-78373061 | Msa0094960:CDS |
| ATTGATCCCACCACACATTG+AGG | 0.605497 | 1_2:-78372382 | Msa0094960:CDS |
| TAGAGCTGATTATCCAGAAG+GGG | 0.606448 | 1_2:-78373107 | Msa0094960:CDS |
| ATCAATCTAAGGGCAAAGGA+GGG | 0.607832 | 1_2:-78372098 | Msa0094960:CDS |
| GAGCATCCTCAATGTGTGGT+GGG | 0.618690 | 1_2:+78372376 | None:intergenic |
| AGAGAAGCTTAATGTGTCAG+TGG | 0.619453 | 1_2:-78373218 | Msa0094960:CDS |
| GAGCAATTGAACTTGTAGCA+GGG | 0.620186 | 1_2:-78372266 | Msa0094960:CDS |
| CCACACATTGAGGATGCTCA+TGG | 0.621467 | 1_2:-78372372 | Msa0094960:CDS |
| TTAGAGCTGATTATCCAGAA+GGG | 0.629847 | 1_2:-78373108 | Msa0094960:CDS |
| ATATTCCTCTCAATATGCCA+AGG | 0.634379 | 1_2:-78376243 | Msa0094960:CDS |
| AGGCAACAGAATCAATAAGT+GGG | 0.639484 | 1_2:+78373038 | None:intergenic |
| AAGCACCTTGGCATATTGAG+AGG | 0.644905 | 1_2:+78376238 | None:intergenic |
| TGAGCATCCTCAATGTGTGG+TGG | 0.646759 | 1_2:+78372375 | None:intergenic |
| GCGAGCTGCACTGAACGTGA+TGG | 0.648755 | 1_2:+78373255 | None:intergenic |
| GAACACTTCACAGTACCAGA+AGG | 0.657571 | 1_2:-78372294 | Msa0094960:CDS |
| CATCACCAACTGCAAAAGTG+AGG | 0.664865 | 1_2:+78372190 | None:intergenic |
| GATGCTAATAATGCATGTGA+AGG | 0.670003 | 1_2:-78372171 | Msa0094960:CDS |
| GTGTTCCCAAATGCATCATG+GGG | 0.678543 | 1_2:-78372408 | Msa0094960:CDS |
| ATGTTGCAAATCAAAATGCA+TGG | 0.681924 | 1_2:-78371907 | Msa0094960:three_prime_UTR |
| ACCATGAAGAATGATAACTC+TGG | 0.691442 | 1_2:-78372003 | Msa0094960:CDS |
| CCATGAGCATCCTCAATGTG+TGG | 0.691876 | 1_2:+78372372 | None:intergenic |
| AACCCACCTAGAAGAACCAG+AGG | 0.693541 | 1_2:-78373004 | Msa0094960:intron |
| ATGAGAAGTATTTCAATACG+TGG | 0.697286 | 1_2:-78371725 | Msa0094960:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTAAAAAAAAAAATTACAT+TGG | + | chr1_2:78371826-78371845 | None:intergenic | 10.0% |
| !!! | CAATGTAATTTTTTTTTTTA+AGG | - | chr1_2:78371824-78371843 | Msa0094960:three_prime_UTR | 10.0% |
| !!! | TAGTTTTAAAAGTAATATTT+TGG | + | chr1_2:78372236-78372255 | None:intergenic | 10.0% |
| !!! | AATGTTATTATTTATTTTAG+AGG | - | chr1_2:78372631-78372650 | Msa0094960:intron | 10.0% |
| !!! | TTTTTATTTTTGTTTTTTTC+AGG | + | chr1_2:78372836-78372855 | None:intergenic | 10.0% |
| !! | TTAAGAAAAATGTATAAATA+AGG | - | chr1_2:78372912-78372931 | Msa0094960:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+GGG | - | chr1_2:78372913-78372932 | Msa0094960:intron | 10.0% |
| !! | TAAATGTAAAATTACATAAA+AGG | - | chr1_2:78373120-78373139 | Msa0094960:CDS | 10.0% |
| !! | ACATAAATTGAAAAACATAA+GGG | + | chr1_2:78372039-78372058 | None:intergenic | 15.0% |
| !!! | TATTGAATGTAAAGTTATTT+TGG | + | chr1_2:78372453-78372472 | None:intergenic | 15.0% |
| !! | TAATTTATTTAGATATTCGT+AGG | - | chr1_2:78372770-78372789 | Msa0094960:intron | 15.0% |
| !! | AATTTATTTAGATATTCGTA+GGG | - | chr1_2:78372771-78372790 | Msa0094960:intron | 15.0% |
| !! | AAGAAAAATGTATAAATAAG+GGG | - | chr1_2:78372914-78372933 | Msa0094960:intron | 15.0% |
| !! | TTTCATTAAAATAACTGAAA+TGG | + | chr1_2:78373337-78373356 | None:intergenic | 15.0% |
| !!! | AAATGTGTTTTACTATATAA+AGG | - | chr1_2:78373441-78373460 | Msa0094960:CDS | 15.0% |
| !!! | AATGTGTTTTACTATATAAA+GGG | - | chr1_2:78373442-78373461 | Msa0094960:CDS | 15.0% |
| !!! | CAACTTTTATTTATATATCT+AGG | - | chr1_2:78374306-78374325 | Msa0094960:intron | 15.0% |
| !!! | GAAAGAATTTTAAATTGATA+AGG | + | chr1_2:78374479-78374498 | None:intergenic | 15.0% |
| !!! | TATCAATTTAAAATTCTTTC+AGG | - | chr1_2:78374479-78374498 | Msa0094960:intron | 15.0% |
| !! | AAAAGGTGAAATTAAATAAA+GGG | - | chr1_2:78374708-78374727 | Msa0094960:intron | 15.0% |
| !! | ACAAAAATATTCAATCATAT+TGG | + | chr1_2:78375405-78375424 | None:intergenic | 15.0% |
| !!! | TTGAATATTTTTGTACATTA+TGG | - | chr1_2:78375411-78375430 | Msa0094960:intron | 15.0% |
| !! | TTGATGTATGAAATTAAATT+TGG | - | chr1_2:78375486-78375505 | Msa0094960:intron | 15.0% |
| !!! | CTTTTAAGTAAGTAAACATT+TGG | + | chr1_2:78371964-78371983 | None:intergenic | 20.0% |
| !! | ACTTAAAAGTTTAACATTGA+TGG | - | chr1_2:78371975-78371994 | Msa0094960:CDS | 20.0% |
| !! | CACATAAATTGAAAAACATA+AGG | + | chr1_2:78372040-78372059 | None:intergenic | 20.0% |
| !!! | TTGATCATATATTTTGTGTT+TGG | - | chr1_2:78372068-78372087 | Msa0094960:CDS | 20.0% |
| !! | AAAAGAAAAAGTTATTGCAT+TGG | + | chr1_2:78372177-78372196 | None:intergenic | 20.0% |
| !! | AATCAATACTGTAGTTAATA+AGG | - | chr1_2:78372255-78372274 | Msa0094960:CDS | 20.0% |
| !! | TGTAGTTAATAAGGATAATT+TGG | - | chr1_2:78372264-78372283 | Msa0094960:CDS | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | + | chr1_2:78372293-78372312 | None:intergenic | 20.0% |
| !! | TGTATATTGCATAAATAAAC+AGG | + | chr1_2:78372750-78372769 | None:intergenic | 20.0% |
| !! | GAAATGGAATATATTGTATT+GGG | - | chr1_2:78372936-78372955 | Msa0094960:intron | 20.0% |
| !!! | GTAGTATTAATTAGAGTTTT+AGG | - | chr1_2:78372969-78372988 | Msa0094960:intron | 20.0% |
| !! | GTAAAGTATAAAAACTGAAA+TGG | + | chr1_2:78373173-78373192 | None:intergenic | 20.0% |
| !!! | TGGGTTTTATTAAAATAACA+AGG | - | chr1_2:78373471-78373490 | Msa0094960:CDS | 20.0% |
| !!! | GGGTTTTATTAAAATAACAA+GGG | - | chr1_2:78373472-78373491 | Msa0094960:CDS | 20.0% |
| !! | TAAAATAACAAGGGTAATAA+TGG | - | chr1_2:78373481-78373500 | Msa0094960:CDS | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr1_2:78373764-78373783 | Msa0094960:intron | 20.0% |
| !!! | TATATTTTCCACACAAAAAA+AGG | + | chr1_2:78374345-78374364 | None:intergenic | 20.0% |
| !!! | TTTTTTTGTGTGGAAAATAT+AGG | - | chr1_2:78374344-78374363 | Msa0094960:intron | 20.0% |
| !! | TAGAAAAATTTCCTATCATA+AGG | - | chr1_2:78374380-78374399 | Msa0094960:intron | 20.0% |
| !! | CAAAAGGTGAAATTAAATAA+AGG | - | chr1_2:78374707-78374726 | Msa0094960:intron | 20.0% |
| !! | TGTATACAAATTTAGATACA+TGG | + | chr1_2:78375049-78375068 | None:intergenic | 20.0% |
| !! | TAGTAAAATACAATTAAGCT+AGG | + | chr1_2:78375095-78375114 | None:intergenic | 20.0% |
| !! | ATTCTTAATTTAATGCAAAG+AGG | - | chr1_2:78375453-78375472 | Msa0094960:intron | 20.0% |
| !!! | AACTATTGTTTTTGTTTGTT+TGG | - | chr1_2:78375519-78375538 | Msa0094960:intron | 20.0% |
| !!! | GTTTCCATTTTTCAATAAAT+TGG | + | chr1_2:78375550-78375569 | None:intergenic | 20.0% |
| !!! | AATTTTACATCATCAATAAC+AGG | + | chr1_2:78376032-78376051 | None:intergenic | 20.0% |
| !! | ATTCTTGTAATAATATAGCT+AGG | - | chr1_2:78376162-78376181 | Msa0094960:intron | 20.0% |
| ! | ATTACATTGGATATAGTGTT+GGG | + | chr1_2:78371813-78371832 | None:intergenic | 25.0% |
| ! | AATTACATTGGATATAGTGT+TGG | + | chr1_2:78371814-78371833 | None:intergenic | 25.0% |
| ! | CTAATAATCACAGTACATAA+AGG | + | chr1_2:78371903-78371922 | None:intergenic | 25.0% |
| ! | CTTTATGTACTGTGATTATT+AGG | - | chr1_2:78371901-78371920 | Msa0094960:three_prime_UTR | 25.0% |
| !!! | AAACGACACTCATTTTAAAA+CGG | - | chr1_2:78372342-78372361 | Msa0094960:CDS | 25.0% |
| ! | AATGTATAAATAAGGGGAAA+TGG | - | chr1_2:78372920-78372939 | Msa0094960:intron | 25.0% |
| ! | GGAAATGGAATATATTGTAT+TGG | - | chr1_2:78372935-78372954 | Msa0094960:intron | 25.0% |
| !! | GATAAGCTAATTAAAGTGTT+TGG | - | chr1_2:78373072-78373091 | Msa0094960:CDS | 25.0% |
| !! | AAAGTGTTTGGTAAAAATAG+CGG | - | chr1_2:78373084-78373103 | Msa0094960:CDS | 25.0% |
| ! | TACTATATAAAGGGTAAAGT+TGG | - | chr1_2:78373451-78373470 | Msa0094960:CDS | 25.0% |
| ! | ACTATATAAAGGGTAAAGTT+GGG | - | chr1_2:78373452-78373471 | Msa0094960:CDS | 25.0% |
| !! | TTGAAATGACTCAGTTATTT+TGG | - | chr1_2:78373741-78373760 | Msa0094960:intron | 25.0% |
| !!! | TGAAATGACTCAGTTATTTT+GGG | - | chr1_2:78373742-78373761 | Msa0094960:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr1_2:78373763-78373782 | Msa0094960:intron | 25.0% |
| ! | GTGTATAATAGTACTTAATC+TGG | + | chr1_2:78373964-78373983 | None:intergenic | 25.0% |
| ! | TTGATACCAAAGTAACAAAA+AGG | - | chr1_2:78374052-78374071 | Msa0094960:intron | 25.0% |
| !!! | TATTGTCCTTTTTGTTACTT+TGG | + | chr1_2:78374061-78374080 | None:intergenic | 25.0% |
| !!! | ATTCTAGAACAATATAGCAT+TGG | - | chr1_2:78374169-78374188 | Msa0094960:intron | 25.0% |
| !!! | TATGTATACCTTTTTTTGTG+TGG | - | chr1_2:78374334-78374353 | Msa0094960:intron | 25.0% |
| ! | AATTGTTTGAACCTTATGAT+AGG | + | chr1_2:78374394-78374413 | None:intergenic | 25.0% |
| ! | TACGTTGAATACATAAAATC+AGG | - | chr1_2:78374605-78374624 | Msa0094960:intron | 25.0% |
| ! | ATAAAATCAGGACAAAAACA+AGG | - | chr1_2:78374617-78374636 | Msa0094960:intron | 25.0% |
| ! | TGAAGCATACATTAAACAAA+AGG | - | chr1_2:78374691-78374710 | Msa0094960:intron | 25.0% |
| ! | GCATATATTTATGATGTGTT+TGG | - | chr1_2:78375259-78375278 | Msa0094960:intron | 25.0% |
| ! | ACTCCATACATGTAATTAAA+CGG | - | chr1_2:78375378-78375397 | Msa0094960:intron | 25.0% |
| !! | AAAAATGGAAACTTTGAAGA+AGG | - | chr1_2:78375558-78375577 | Msa0094960:intron | 25.0% |
| !!! | TTTGATTTGCAACATTACTT+AGG | + | chr1_2:78376084-78376103 | None:intergenic | 25.0% |
| ! | AATAAAAATACTCAACGAGA+TGG | + | chr1_2:78376128-78376147 | None:intergenic | 25.0% |
| AGGAACTATATGCAATGTAA+TGG | - | chr1_2:78371844-78371863 | Msa0094960:three_prime_UTR | 30.0% | |
| ATATGCAATGTAATGGTGTT+TGG | - | chr1_2:78371851-78371870 | Msa0094960:three_prime_UTR | 30.0% | |
| TGAAGTACAACAATGAAGAA+AGG | + | chr1_2:78372001-78372020 | None:intergenic | 30.0% | |
| ! | TGTTCAGAGTATTAATTGGA+GGG | + | chr1_2:78372207-78372226 | None:intergenic | 30.0% |
| ! | GTAGTGTTCAGAGTATTAAT+TGG | + | chr1_2:78372211-78372230 | None:intergenic | 30.0% |
| !! | ATTCGATTCAGCTCATTTTT+AGG | + | chr1_2:78372563-78372582 | None:intergenic | 30.0% |
| GATACATTTGTAGTATCATG+GGG | + | chr1_2:78372812-78372831 | None:intergenic | 30.0% | |
| CGATACATTTGTAGTATCAT+GGG | + | chr1_2:78372813-78372832 | None:intergenic | 30.0% | |
| ATATGTGTGAAAAACCAAAC+TGG | + | chr1_2:78372893-78372912 | None:intergenic | 30.0% | |
| GACGTAATATACATAAGAAC+TGG | - | chr1_2:78373375-78373394 | Msa0094960:CDS | 30.0% | |
| AACGCAGGAAAAAAATATAG+AGG | - | chr1_2:78373399-78373418 | Msa0094960:CDS | 30.0% | |
| TTGACAAAAAAAGCTCTGTT+TGG | + | chr1_2:78373629-78373648 | None:intergenic | 30.0% | |
| ! | CTATAAGCTATAAGCTCTTT+TGG | - | chr1_2:78373662-78373681 | Msa0094960:intron | 30.0% |
| AAACAGACCCTTATTGTATT+GGG | - | chr1_2:78373695-78373714 | Msa0094960:intron | 30.0% | |
| CATCATTCCCAATACAATAA+GGG | + | chr1_2:78373705-78373724 | None:intergenic | 30.0% | |
| TCATCATTCCCAATACAATA+AGG | + | chr1_2:78372947-78372966 | None:intergenic | 30.0% | |
| AGAAAATGGGTCAGATATTT+CGG | - | chr1_2:78373777-78373796 | Msa0094960:intron | 30.0% | |
| CAAGTCAAACAACATAAGAA+CGG | + | chr1_2:78374035-78374054 | None:intergenic | 30.0% | |
| AAATGTGATGTGAGAATATC+AGG | - | chr1_2:78374084-78374103 | Msa0094960:intron | 30.0% | |
| !!! | TCTTTTTCAAGAGCACTTTT+TGG | + | chr1_2:78374281-78374300 | None:intergenic | 30.0% |
| ! | TAATCTCTTTTCTCAGAAGT+TGG | + | chr1_2:78374806-78374825 | None:intergenic | 30.0% |
| ! | ACTTCTGAGAAAAGAGATTA+TGG | - | chr1_2:78374806-78374825 | Msa0094960:intron | 30.0% |
| ATTCCAATACAGACTATGTA+TGG | - | chr1_2:78374833-78374852 | Msa0094960:intron | 30.0% | |
| GAAATTGTTATCCATAACTC+TGG | - | chr1_2:78374911-78374930 | Msa0094960:intron | 30.0% | |
| TTATGATGTGTTTGGATTGA+CGG | - | chr1_2:78375267-78375286 | Msa0094960:intron | 30.0% | |
| ! | GTTAATGTGATTTTCGCAAT+TGG | - | chr1_2:78375313-78375332 | Msa0094960:intron | 30.0% |
| GCAGCCAATTTATTGAAAAA+TGG | - | chr1_2:78375543-78375562 | Msa0094960:intron | 30.0% | |
| ! | GACATAAACTTTTCCAATTG+TGG | + | chr1_2:78375787-78375806 | None:intergenic | 30.0% |
| TCAAGTTCCTTATCAATCTA+AGG | - | chr1_2:78375887-78375906 | Msa0094960:intron | 30.0% | |
| CAAGTTCCTTATCAATCTAA+GGG | - | chr1_2:78375888-78375907 | Msa0094960:intron | 30.0% | |
| TCATGGTGTAAAATGTACTT+AGG | + | chr1_2:78375980-78375999 | None:intergenic | 30.0% | |
| ATTACTTAGGTATGCTTGTT+GGG | + | chr1_2:78376071-78376090 | None:intergenic | 30.0% | |
| ATGTTGCAAATCAAAATGCA+TGG | - | chr1_2:78376089-78376108 | Msa0094960:intron | 30.0% | |
| !! | ATGAGAAGTATTTCAATACG+TGG | - | chr1_2:78376271-78376290 | Msa0094960:CDS | 30.0% |
| ATATTCCTCTCAATATGCCA+AGG | - | chr1_2:78371753-78371772 | Msa0094960:three_prime_UTR | 35.0% | |
| !!! | GACACTCATTTTGAAACAGA+GGG | + | chr1_2:78372108-78372127 | None:intergenic | 35.0% |
| ! | GTGTTCAGAGTATTAATTGG+AGG | + | chr1_2:78372208-78372227 | None:intergenic | 35.0% |
| !!! | GACACTCATTTTAAAACGGA+TGG | - | chr1_2:78372346-78372365 | Msa0094960:CDS | 35.0% |
| GCGATACATTTGTAGTATCA+TGG | + | chr1_2:78372814-78372833 | None:intergenic | 35.0% | |
| !!! | TTAGAGTTTTAGGCTCTGTT+TGG | - | chr1_2:78372979-78372998 | Msa0094960:intron | 35.0% |
| GCTCTGTTTGGTAAAAATAG+CGG | - | chr1_2:78372991-78373010 | Msa0094960:intron | 35.0% | |
| ! | TAAGCTATAAGCTCTTTTGG+TGG | - | chr1_2:78373665-78373684 | Msa0094960:intron | 35.0% |
| CAATACAATAAGGGTCTGTT+TGG | + | chr1_2:78373696-78373715 | None:intergenic | 35.0% | |
| CAAACAGACCCTTATTGTAT+TGG | - | chr1_2:78373694-78373713 | Msa0094960:intron | 35.0% | |
| GAAAATGGGTCAGATATTTC+GGG | - | chr1_2:78373778-78373797 | Msa0094960:intron | 35.0% | |
| !! | GTTCTAGAATCTAGATCTCT+AGG | + | chr1_2:78374159-78374178 | None:intergenic | 35.0% |
| CTAACATGTTCCTTATCACA+TGG | - | chr1_2:78374245-78374264 | Msa0094960:intron | 35.0% | |
| TGTGGAAAATATAGGTCTCA+TGG | - | chr1_2:78374352-78374371 | Msa0094960:intron | 35.0% | |
| GTGGAAAATATAGGTCTCAT+GGG | - | chr1_2:78374353-78374372 | Msa0094960:intron | 35.0% | |
| TGGAAAATATAGGTCTCATG+GGG | - | chr1_2:78374354-78374373 | Msa0094960:intron | 35.0% | |
| !! | CTTTCAGGTTTATTGCCAAA+TGG | - | chr1_2:78374494-78374513 | Msa0094960:intron | 35.0% |
| !! | TCCAAAAGCATCAAACCTAA+AGG | - | chr1_2:78374532-78374551 | Msa0094960:intron | 35.0% |
| !! | CCAAAAGCATCAAACCTAAA+GGG | - | chr1_2:78374533-78374552 | Msa0094960:intron | 35.0% |
| TGAAACTGTCCAATTAGGTA+TGG | + | chr1_2:78374582-78374601 | None:intergenic | 35.0% | |
| ATACCTAATTGGACAGTTTC+AGG | - | chr1_2:78374581-78374600 | Msa0094960:intron | 35.0% | |
| TATCCTGAAACTGTCCAATT+AGG | + | chr1_2:78374587-78374606 | None:intergenic | 35.0% | |
| ! | AAAACAAGGTGACATGCTTT+TGG | - | chr1_2:78374631-78374650 | Msa0094960:intron | 35.0% |
| CTACCATACATAGTCTGTAT+TGG | + | chr1_2:78374839-78374858 | None:intergenic | 35.0% | |
| TATGTATGGTAGCAATGGTT+GGG | - | chr1_2:78374847-78374866 | Msa0094960:intron | 35.0% | |
| ! | TTTAGAGCTGATTATCCAGA+AGG | - | chr1_2:78374887-78374906 | Msa0094960:intron | 35.0% |
| TTAGAGCTGATTATCCAGAA+GGG | - | chr1_2:78374888-78374907 | Msa0094960:intron | 35.0% | |
| AGGCAACAGAATCAATAAGT+GGG | + | chr1_2:78374961-78374980 | None:intergenic | 35.0% | |
| AAGGCAACAGAATCAATAAG+TGG | + | chr1_2:78374962-78374981 | None:intergenic | 35.0% | |
| !! | TATTGATTCTGTTGCCTTGA+AGG | - | chr1_2:78374964-78374983 | Msa0094960:intron | 35.0% |
| !! | AAATTACCTCTGGTTCTTCT+AGG | + | chr1_2:78375001-78375020 | None:intergenic | 35.0% |
| TAGGGAACAAAAATTACCTC+TGG | + | chr1_2:78375011-78375030 | None:intergenic | 35.0% | |
| GGACCGTTTAATTACATGTA+TGG | + | chr1_2:78375384-78375403 | None:intergenic | 35.0% | |
| ! | TCAATTGCTCTTTTTCCTTC+TGG | + | chr1_2:78375720-78375739 | None:intergenic | 35.0% |
| GATGCTAATAATGCATGTGA+AGG | - | chr1_2:78375825-78375844 | Msa0094960:intron | 35.0% | |
| ! | TAGAGGCAAACTTCGTTTTA+AGG | - | chr1_2:78375926-78375945 | Msa0094960:intron | 35.0% |
| ACCATGAAGAATGATAACTC+TGG | - | chr1_2:78375993-78376012 | Msa0094960:intron | 35.0% | |
| ACCAGAGTTATCATTCTTCA+TGG | + | chr1_2:78375997-78376016 | None:intergenic | 35.0% | |
| CATTACTTAGGTATGCTTGT+TGG | + | chr1_2:78376072-78376091 | None:intergenic | 35.0% | |
| TTCAATACGTGGCAATACTA+TGG | - | chr1_2:78376282-78376301 | Msa0094960:exon | 35.0% | |
| ! | CTGTATAAGACAAAGCACCT+TGG | + | chr1_2:78371773-78371792 | None:intergenic | 40.0% |
| GGTGCTTTGTCTTATACAGA+TGG | - | chr1_2:78371774-78371793 | Msa0094960:three_prime_UTR | 40.0% | |
| !!! | CGACACTCATTTTGAAACAG+AGG | + | chr1_2:78372109-78372128 | None:intergenic | 40.0% |
| ! | CAAACTGGCTCAGATAAAAC+GGG | + | chr1_2:78372878-78372897 | None:intergenic | 40.0% |
| ! | CCAAACTGGCTCAGATAAAA+CGG | + | chr1_2:78372879-78372898 | None:intergenic | 40.0% |
| TACATAAGAACTGGAAACGC+AGG | - | chr1_2:78373384-78373403 | Msa0094960:CDS | 40.0% | |
| CTATAAGCTCAAACGCTACT+TGG | - | chr1_2:78373527-78373546 | Msa0094960:intron | 40.0% | |
| CAATAAGGGTCTGTTTGGTA+AGG | + | chr1_2:78373691-78373710 | None:intergenic | 40.0% | |
| ATCCCTTTCGTCAGATCTTA+AGG | - | chr1_2:78373879-78373898 | Msa0094960:intron | 40.0% | |
| TGCCTTAAGATCTGACGAAA+GGG | + | chr1_2:78373884-78373903 | None:intergenic | 40.0% | |
| GCATTGGAAATCTCTTCACA+TGG | - | chr1_2:78374185-78374204 | Msa0094960:intron | 40.0% | |
| TCTCTTCACATGGCTTACAA+AGG | - | chr1_2:78374195-78374214 | Msa0094960:intron | 40.0% | |
| AGGAACATGTTAGTAAGTGC+AGG | + | chr1_2:78374238-78374257 | None:intergenic | 40.0% | |
| ACATGTTCCTTATCACATGG+TGG | - | chr1_2:78374248-78374267 | Msa0094960:intron | 40.0% | |
| TCTTGTTCCACCATGTGATA+AGG | + | chr1_2:78374258-78374277 | None:intergenic | 40.0% | |
| CCAACTTCAAAGTCACCATT+TGG | + | chr1_2:78374512-78374531 | None:intergenic | 40.0% | |
| !! | CCAAATGGTGACTTTGAAGT+TGG | - | chr1_2:78374509-78374528 | Msa0094960:intron | 40.0% |
| !! | CCCTTTAGGTTTGATGCTTT+TGG | + | chr1_2:78374536-78374555 | None:intergenic | 40.0% |
| CCAATTAGGTATGGCATCAT+GGG | + | chr1_2:78374573-78374592 | None:intergenic | 40.0% | |
| TCCAATTAGGTATGGCATCA+TGG | + | chr1_2:78374574-78374593 | None:intergenic | 40.0% | |
| !! | ATGCTTTTGGTTGTACCAGA+AGG | - | chr1_2:78374644-78374663 | Msa0094960:intron | 40.0% |
| AGAGAAGCTTAATGTGTCAG+TGG | - | chr1_2:78374778-78374797 | Msa0094960:intron | 40.0% | |
| CAGACTATGTATGGTAGCAA+TGG | - | chr1_2:78374842-78374861 | Msa0094960:intron | 40.0% | |
| CTATGTATGGTAGCAATGGT+TGG | - | chr1_2:78374846-78374865 | Msa0094960:intron | 40.0% | |
| GTTGGGAATCATTTGCTTGT+GGG | - | chr1_2:78374864-78374883 | Msa0094960:intron | 40.0% | |
| TAGAGCTGATTATCCAGAAG+GGG | - | chr1_2:78374889-78374908 | Msa0094960:intron | 40.0% | |
| TGGATAACAATTTCCCCTTC+TGG | + | chr1_2:78374905-78374924 | None:intergenic | 40.0% | |
| CATCTTCAACACCAGAGTTA+TGG | + | chr1_2:78374925-78374944 | None:intergenic | 40.0% | |
| TGGACATGCACTTCTATGTA+GGG | + | chr1_2:78375029-78375048 | None:intergenic | 40.0% | |
| ATGGACATGCACTTCTATGT+AGG | + | chr1_2:78375030-78375049 | None:intergenic | 40.0% | |
| GATGCATTTGGGAACACATA+TGG | + | chr1_2:78375585-78375604 | None:intergenic | 40.0% | |
| ATGTGTTCCCAAATGCATCA+TGG | - | chr1_2:78375586-78375605 | Msa0094960:intron | 40.0% | |
| TGTGTTCCCAAATGCATCAT+GGG | - | chr1_2:78375587-78375606 | Msa0094960:intron | 40.0% | |
| ATACTCCCCATGATGCATTT+GGG | + | chr1_2:78375596-78375615 | None:intergenic | 40.0% | |
| AATACTCCCCATGATGCATT+TGG | + | chr1_2:78375597-78375616 | None:intergenic | 40.0% | |
| TCAACTATCCATCCTGGTAA+TGG | + | chr1_2:78375651-78375670 | None:intergenic | 40.0% | |
| AGAGATTCAACTATCCATCC+TGG | + | chr1_2:78375657-78375676 | None:intergenic | 40.0% | |
| AGAGCAATTGAACTTGTAGC+AGG | - | chr1_2:78375729-78375748 | Msa0094960:intron | 40.0% | |
| GAGCAATTGAACTTGTAGCA+GGG | - | chr1_2:78375730-78375749 | Msa0094960:intron | 40.0% | |
| CAAGAAGTCTTCACCACAAT+TGG | - | chr1_2:78375771-78375790 | Msa0094960:intron | 40.0% | |
| !! | TATGTCCTCACTTTTGCAGT+TGG | - | chr1_2:78375801-78375820 | Msa0094960:intron | 40.0% |
| !! | ATGACTGTAGAAGCATTTGC+TGG | - | chr1_2:78375852-78375871 | Msa0094960:intron | 40.0% |
| CCTTTGCCCTTAGATTGATA+AGG | + | chr1_2:78375897-78375916 | None:intergenic | 40.0% | |
| CCTTATCAATCTAAGGGCAA+AGG | - | chr1_2:78375894-78375913 | Msa0094960:intron | 40.0% | |
| TATCAATCTAAGGGCAAAGG+AGG | - | chr1_2:78375897-78375916 | Msa0094960:intron | 40.0% | |
| ATCAATCTAAGGGCAAAGGA+GGG | - | chr1_2:78375898-78375917 | Msa0094960:intron | 40.0% | |
| !! | GATAACTCTGGTTCTCTTTG+TGG | - | chr1_2:78376005-78376024 | Msa0094960:intron | 40.0% |
| ATACTCAACGAGATGGATGA+TGG | + | chr1_2:78376121-78376140 | None:intergenic | 40.0% | |
| AAGCACCTTGGCATATTGAG+AGG | + | chr1_2:78371761-78371780 | None:intergenic | 45.0% | |
| ! | CCGTTTTATCTGAGCCAGTT+TGG | - | chr1_2:78372876-78372895 | Msa0094960:intron | 45.0% |
| AATGGGTCAGATATTTCGGG+AGG | - | chr1_2:78373781-78373800 | Msa0094960:intron | 45.0% | |
| ATGGGTCAGATATTTCGGGA+GGG | - | chr1_2:78373782-78373801 | Msa0094960:intron | 45.0% | |
| ATCTGACGAAAGGGATGTTG+TGG | + | chr1_2:78373875-78373894 | None:intergenic | 45.0% | |
| GTGCCTTAAGATCTGACGAA+AGG | + | chr1_2:78373885-78373904 | None:intergenic | 45.0% | |
| TGTTAGTAAGTGCAGGCTGT+GGG | + | chr1_2:78374231-78374250 | None:intergenic | 45.0% | |
| ATGTTAGTAAGTGCAGGCTG+TGG | + | chr1_2:78374232-78374251 | None:intergenic | 45.0% | |
| TTGTCACTACTGTGCCCTTT+AGG | + | chr1_2:78374550-78374569 | None:intergenic | 45.0% | |
| CCCATGATGCCATACCTAAT+TGG | - | chr1_2:78374570-78374589 | Msa0094960:intron | 45.0% | |
| CTAACAGCATAAGCACCTTC+TGG | + | chr1_2:78374662-78374681 | None:intergenic | 45.0% | |
| !! | CAGAAGGTGCTTATGCTGTT+AGG | - | chr1_2:78374660-78374679 | Msa0094960:intron | 45.0% |
| GGTTGGGAATCATTTGCTTG+TGG | - | chr1_2:78374863-78374882 | Msa0094960:intron | 45.0% | |
| GTTGAAGATGATCCAGCTTG+TGG | - | chr1_2:78374935-78374954 | Msa0094960:intron | 45.0% | |
| ! | AGGTGGGTTCAAAACCTTCA+AGG | + | chr1_2:78374981-78375000 | None:intergenic | 45.0% |
| !! | TACCTCTGGTTCTTCTAGGT+GGG | + | chr1_2:78374997-78375016 | None:intergenic | 45.0% |
| !! | TTACCTCTGGTTCTTCTAGG+TGG | + | chr1_2:78374998-78375017 | None:intergenic | 45.0% |
| GTGTTCCCAAATGCATCATG+GGG | - | chr1_2:78375588-78375607 | Msa0094960:intron | 45.0% | |
| ATTGATCCCACCACACATTG+AGG | - | chr1_2:78375614-78375633 | Msa0094960:intron | 45.0% | |
| GAACACTTCACAGTACCAGA+AGG | - | chr1_2:78375702-78375721 | Msa0094960:intron | 45.0% | |
| CATCACCAACTGCAAAAGTG+AGG | + | chr1_2:78375809-78375828 | None:intergenic | 45.0% | |
| CGACAAGACGTACTAGGATT+AGG | - | chr1_2:78375952-78375971 | Msa0094960:intron | 45.0% | |
| !!! | ATTTTTTTTTACAAATAAAT+AGG | + | chr1_2:78373993-78374012 | None:intergenic | 5.0% |
| CTCAGATAAAACGGGACGGA+GGG | + | chr1_2:78372870-78372889 | None:intergenic | 50.0% | |
| CTGGCTCAGATAAAACGGGA+CGG | + | chr1_2:78372874-78372893 | None:intergenic | 50.0% | |
| GGTGCTTATGCTGTTAGGCT+AGG | - | chr1_2:78374665-78374684 | Msa0094960:intron | 50.0% | |
| TCAATAAGTGGGCCACAAGC+TGG | + | chr1_2:78374950-78374969 | None:intergenic | 50.0% | |
| AACCCACCTAGAAGAACCAG+AGG | - | chr1_2:78374992-78375011 | Msa0094960:intron | 50.0% | |
| GAGCATCCTCAATGTGTGGT+GGG | + | chr1_2:78375623-78375642 | None:intergenic | 50.0% | |
| TGAGCATCCTCAATGTGTGG+TGG | + | chr1_2:78375624-78375643 | None:intergenic | 50.0% | |
| CCATGAGCATCCTCAATGTG+TGG | + | chr1_2:78375627-78375646 | None:intergenic | 50.0% | |
| CCACACATTGAGGATGCTCA+TGG | - | chr1_2:78375624-78375643 | Msa0094960:intron | 50.0% | |
| GATGCTCATGGTCCATTACC+AGG | - | chr1_2:78375636-78375655 | Msa0094960:intron | 50.0% | |
| CTCATGGTCCATTACCAGGA+TGG | - | chr1_2:78375640-78375659 | Msa0094960:intron | 50.0% | |
| !! | GGCAAAGGAGGGTTTGTTAG+AGG | - | chr1_2:78375909-78375928 | Msa0094960:intron | 50.0% |
| AGGCTACGACAAGACGTACT+AGG | - | chr1_2:78375946-78375965 | Msa0094960:intron | 50.0% | |
| GCTCAGATAAAACGGGACGG+AGG | + | chr1_2:78372871-78372890 | None:intergenic | 55.0% | |
| GGTCAGATATTTCGGGAGGG+AGG | - | chr1_2:78373785-78373804 | Msa0094960:intron | 55.0% | |
| GCGAGCTGCACTGAACGTGA+TGG | + | chr1_2:78374744-78374763 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 78371675 | 78376343 | 78371675 | ID=Msa0094960;Name=Msa0094960 |
| chr1_2 | mRNA | 78371675 | 78376343 | 78371675 | ID=Msa0094960-mRNA-1;Parent=Msa0094960;Name=Msa0094960-mRNA-1;_AED=0.01;_eAED=0.01;_QI=51|1|1|1|0.5|0.66|3|258|373 |
| chr1_2 | exon | 78371675 | 78372471 | 78371675 | ID=Msa0094960-mRNA-1:exon:27928;Parent=Msa0094960-mRNA-1 |
| chr1_2 | exon | 78373005 | 78373517 | 78373005 | ID=Msa0094960-mRNA-1:exon:27927;Parent=Msa0094960-mRNA-1 |
| chr1_2 | exon | 78376223 | 78376343 | 78376223 | ID=Msa0094960-mRNA-1:exon:27926;Parent=Msa0094960-mRNA-1 |
| chr1_2 | five_prime_UTR | 78376293 | 78376343 | 78376293 | ID=Msa0094960-mRNA-1:five_prime_utr;Parent=Msa0094960-mRNA-1 |
| chr1_2 | CDS | 78376223 | 78376292 | 78376223 | ID=Msa0094960-mRNA-1:cds;Parent=Msa0094960-mRNA-1 |
| chr1_2 | CDS | 78373005 | 78373517 | 78373005 | ID=Msa0094960-mRNA-1:cds;Parent=Msa0094960-mRNA-1 |
| chr1_2 | CDS | 78371933 | 78372471 | 78371933 | ID=Msa0094960-mRNA-1:cds;Parent=Msa0094960-mRNA-1 |
| chr1_2 | three_prime_UTR | 78371675 | 78371932 | 78371675 | ID=Msa0094960-mRNA-1:three_prime_utr;Parent=Msa0094960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
