Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0304250 | XP_003597843.1 | 98.660 | 373 | 5 | 0 | 1 | 373 | 1 | 373 | 0.0 | 764 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0304250 | G7IMH9 | 98.660 | 373 | 5 | 0 | 1 | 373 | 1 | 373 | 0.0 | 764 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0031120 | Msa0304250 | 0.819163 | 1.341853e-52 | -8.615850e-47 |
| Msa0040220 | Msa0304250 | 0.811411 | 7.096551e-51 | -8.615850e-47 |
| Msa0094960 | Msa0304250 | 0.990042 | 8.530809e-181 | -8.615850e-47 |
| Msa0173250 | Msa0304250 | 0.811333 | 7.379118e-51 | -8.615850e-47 |
| Msa0226640 | Msa0304250 | 0.876013 | 1.956816e-68 | -8.615850e-47 |
| Msa0228540 | Msa0304250 | 0.831008 | 2.129178e-55 | -8.615850e-47 |
| Msa0260250 | Msa0304250 | 0.962998 | 1.501047e-121 | -8.615850e-47 |
| Msa0260290 | Msa0304250 | 0.963217 | 8.136985e-122 | -8.615850e-47 |
| Msa0304250 | Msa0356640 | 0.807220 | 5.623129e-50 | -8.615850e-47 |
| Msa0304250 | Msa0401060 | 0.806125 | 9.573808e-50 | -8.615850e-47 |
| Msa0304250 | Msa0475810 | 0.801049 | 1.081450e-48 | -8.615850e-47 |
| Msa0304250 | Msa0495620 | 0.815122 | 1.086580e-51 | -8.615850e-47 |
| Msa0304250 | Msa0550400 | 0.857706 | 1.359440e-62 | -8.615850e-47 |
| Msa0304250 | Msa0605900 | 0.823081 | 1.677919e-53 | -8.615850e-47 |
| Msa0304250 | Msa0646590 | 0.857443 | 1.626815e-62 | -8.615850e-47 |
| Msa0304250 | Msa0686530 | 0.857380 | 1.698090e-62 | -8.615850e-47 |
| Msa0304250 | Msa0966120 | 0.807956 | 3.923578e-50 | -8.615850e-47 |
| Msa0304250 | Msa1258460 | 0.816378 | 5.703104e-52 | -8.615850e-47 |
| Msa0304250 | Msa1448390 | 0.803810 | 2.918525e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0304250 | MtrunA17_Chr2g0332541 | 98.660 | 373 | 5 | 0 | 1 | 373 | 1 | 373 | 0.0 | 764 |
| Msa0304250 | MtrunA17_Chr1g0149051 | 68.661 | 351 | 104 | 2 | 20 | 369 | 31 | 376 | 0.0 | 508 |
| Msa0304250 | MtrunA17_Chr3g0089391 | 50.595 | 336 | 160 | 2 | 26 | 361 | 32 | 361 | 6.07e-119 | 349 |
| Msa0304250 | MtrunA17_Chr4g0019601 | 50.599 | 334 | 159 | 2 | 28 | 361 | 37 | 364 | 3.67e-115 | 339 |
| Msa0304250 | MtrunA17_Chr4g0019581 | 50.000 | 334 | 161 | 2 | 28 | 361 | 106 | 433 | 3.22e-114 | 339 |
| Msa0304250 | MtrunA17_Chr2g0286051 | 45.706 | 361 | 188 | 2 | 3 | 363 | 13 | 365 | 6.28e-113 | 334 |
| Msa0304250 | MtrunA17_Chr4g0019571 | 45.810 | 358 | 188 | 2 | 4 | 361 | 13 | 364 | 2.87e-110 | 327 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0304250 | AT5G11420.1 | 65.014 | 363 | 122 | 1 | 7 | 369 | 9 | 366 | 0.0 | 510 |
| Msa0304250 | AT5G25460.1 | 65.301 | 366 | 122 | 1 | 4 | 369 | 9 | 369 | 1.21e-180 | 506 |
| Msa0304250 | AT4G32460.2 | 64.865 | 370 | 124 | 2 | 1 | 369 | 1 | 365 | 2.57e-178 | 500 |
| Msa0304250 | AT4G32460.1 | 64.865 | 370 | 124 | 2 | 1 | 369 | 1 | 365 | 2.57e-178 | 500 |
| Msa0304250 | AT1G80240.1 | 66.570 | 344 | 110 | 1 | 23 | 366 | 27 | 365 | 2.35e-169 | 477 |
| Msa0304250 | AT4G32460.4 | 67.273 | 330 | 103 | 1 | 40 | 369 | 1 | 325 | 2.54e-165 | 465 |
| Msa0304250 | AT4G32460.3 | 67.273 | 330 | 103 | 1 | 40 | 369 | 1 | 325 | 2.54e-165 | 465 |
| Msa0304250 | AT3G08030.1 | 52.149 | 349 | 160 | 2 | 15 | 361 | 16 | 359 | 1.26e-122 | 358 |
| Msa0304250 | AT2G41800.1 | 48.611 | 360 | 173 | 2 | 15 | 367 | 16 | 370 | 1.27e-120 | 353 |
| Msa0304250 | AT2G41810.1 | 47.011 | 368 | 183 | 2 | 4 | 364 | 5 | 367 | 2.41e-118 | 348 |
| Msa0304250 | AT3G08030.2 | 53.106 | 322 | 146 | 1 | 40 | 361 | 1 | 317 | 2.14e-116 | 341 |
| Msa0304250 | AT2G34510.1 | 47.801 | 341 | 178 | 0 | 23 | 363 | 38 | 378 | 7.66e-113 | 335 |
| Msa0304250 | AT1G29980.1 | 44.928 | 345 | 186 | 1 | 23 | 363 | 38 | 382 | 3.72e-108 | 323 |
| Msa0304250 | AT1G29980.2 | 44.767 | 344 | 186 | 1 | 24 | 363 | 3 | 346 | 8.43e-108 | 321 |
| Msa0304250 | AT2G34510.2 | 47.945 | 292 | 152 | 0 | 72 | 363 | 1 | 292 | 1.59e-97 | 293 |
| Msa0304250 | AT5G14150.2 | 31.746 | 378 | 212 | 14 | 5 | 363 | 7 | 357 | 6.73e-43 | 154 |
| Msa0304250 | AT5G14150.1 | 31.746 | 378 | 212 | 14 | 5 | 363 | 7 | 357 | 6.73e-43 | 154 |
Find 96 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTTAGGTTTGATGCTTT+TGG | 0.196530 | 2_3:-61572592 | None:intergenic |
| TCAAGTTCCTTATCAATCTA+AGG | 0.227907 | 2_3:+61573946 | Msa0304250:CDS |
| TTGTCACTACTGTGCCCTTT+AGG | 0.246643 | 2_3:-61572606 | None:intergenic |
| TGGATAACAATTTCCCCTTC+TGG | 0.270997 | 2_3:-61572961 | None:intergenic |
| AAATTACCTCTGGTTCTTCT+AGG | 0.274083 | 2_3:-61573057 | None:intergenic |
| TATTGATTCTGTTGCCTTGA+AGG | 0.280632 | 2_3:+61573023 | Msa0304250:CDS |
| CCCATGATGCCATACCTAAT+TGG | 0.285226 | 2_3:+61572629 | Msa0304250:CDS |
| ATACCTAATTGGACAGTTTC+AGG | 0.305431 | 2_3:+61572640 | Msa0304250:CDS |
| CAAAAGGTGAAATTAAATAA+AGG | 0.320615 | 2_3:+61572766 | Msa0304250:CDS |
| TATCCTGAAACTGTCCAATT+AGG | 0.329626 | 2_3:-61572643 | None:intergenic |
| AAAACAAGGTGACATGCTTT+TGG | 0.342997 | 2_3:+61572690 | Msa0304250:CDS |
| ACTTCTGAGAAAAGAGATTA+TGG | 0.344578 | 2_3:+61572865 | Msa0304250:CDS |
| CAAGAAGTCTTCACCACAAT+TGG | 0.356227 | 2_3:+61573830 | Msa0304250:CDS |
| AATACTCCCCATGATGCATT+TGG | 0.357606 | 2_3:-61573653 | None:intergenic |
| ACCAGAGTTATCATTCTTCA+TGG | 0.360617 | 2_3:-61574053 | None:intergenic |
| ATTACTTAGGTATGCTTGTT+GGG | 0.366782 | 2_3:-61574127 | None:intergenic |
| CATTACTTAGGTATGCTTGT+TGG | 0.371408 | 2_3:-61574128 | None:intergenic |
| GATAACTCTGGTTCTCTTTG+TGG | 0.379593 | 2_3:+61574064 | Msa0304250:CDS |
| GGCAAAGGAGGGTTTGTTAG+AGG | 0.380600 | 2_3:+61573968 | Msa0304250:CDS |
| TCCAATTAGGTATGGCATCA+TGG | 0.399317 | 2_3:-61572630 | None:intergenic |
| CATCTTCAACACCAGAGTTA+TGG | 0.410007 | 2_3:-61572981 | None:intergenic |
| CTAACAGCATAAGCACCTTC+TGG | 0.410744 | 2_3:-61572718 | None:intergenic |
| AAAAGGTGAAATTAAATAAA+GGG | 0.413489 | 2_3:+61572767 | Msa0304250:CDS |
| CAGAAGGTGCTTATGCTGTT+AGG | 0.416893 | 2_3:+61572719 | Msa0304250:CDS |
| GTTGGGAATCATTTGCTTGT+GGG | 0.420479 | 2_3:+61572923 | Msa0304250:CDS |
| CTACCATACATAGTCTGTAT+TGG | 0.420768 | 2_3:-61572895 | None:intergenic |
| CGACAAGACGTACTAGGATT+AGG | 0.425557 | 2_3:+61574011 | Msa0304250:CDS |
| TTTGATTTGCAACATTACTT+AGG | 0.436219 | 2_3:-61574140 | None:intergenic |
| CTTTCAGGTTTATTGCCAAA+TGG | 0.445556 | 2_3:+61572553 | Msa0304250:intron |
| TACGTTGAATACATAAAATC+AGG | 0.449032 | 2_3:+61572664 | Msa0304250:CDS |
| CCAACTTCAAAGTCACCATT+TGG | 0.454460 | 2_3:-61572568 | None:intergenic |
| TCATGGTGTAAAATGTACTT+AGG | 0.454825 | 2_3:-61574036 | None:intergenic |
| GATGCATTTGGGAACACATA+TGG | 0.455308 | 2_3:-61573641 | None:intergenic |
| AGGCTACGACAAGACGTACT+AGG | 0.457315 | 2_3:+61574005 | Msa0304250:CDS |
| TCAACTATCCATCCTGGTAA+TGG | 0.458492 | 2_3:-61573707 | None:intergenic |
| ATACTCCCCATGATGCATTT+GGG | 0.460441 | 2_3:-61573652 | None:intergenic |
| ATGACTGTAGAAGCATTTGC+TGG | 0.463295 | 2_3:+61573911 | Msa0304250:CDS |
| CCTTTGCCCTTAGATTGATA+AGG | 0.464510 | 2_3:-61573953 | None:intergenic |
| TACCTCTGGTTCTTCTAGGT+GGG | 0.470065 | 2_3:-61573053 | None:intergenic |
| AGAGCAATTGAACTTGTAGC+AGG | 0.483311 | 2_3:+61573788 | Msa0304250:CDS |
| TGAAGCATACATTAAACAAA+AGG | 0.487173 | 2_3:+61572750 | Msa0304250:CDS |
| CCAAAAGCATCAAACCTAAA+GGG | 0.488419 | 2_3:+61572592 | Msa0304250:CDS |
| GATGCTCATGGTCCATTACC+AGG | 0.489743 | 2_3:+61573695 | Msa0304250:CDS |
| TCAATAAGTGGGCCACAAGC+TGG | 0.490288 | 2_3:-61573006 | None:intergenic |
| CCAAATGGTGACTTTGAAGT+TGG | 0.493192 | 2_3:+61572568 | Msa0304250:CDS |
| ATGTGTTCCCAAATGCATCA+TGG | 0.495027 | 2_3:+61573645 | Msa0304250:CDS |
| ATTCCAATACAGACTATGTA+TGG | 0.495208 | 2_3:+61572892 | Msa0304250:CDS |
| TCCAAAAGCATCAAACCTAA+AGG | 0.497345 | 2_3:+61572591 | Msa0304250:CDS |
| CCAATTAGGTATGGCATCAT+GGG | 0.500399 | 2_3:-61572629 | None:intergenic |
| AGGTGGGTTCAAAACCTTCA+AGG | 0.507765 | 2_3:-61573037 | None:intergenic |
| GGTTGGGAATCATTTGCTTG+TGG | 0.513196 | 2_3:+61572922 | Msa0304250:CDS |
| TATGTATGGTAGCAATGGTT+GGG | 0.515899 | 2_3:+61572906 | Msa0304250:CDS |
| TGTGTTCCCAAATGCATCAT+GGG | 0.517111 | 2_3:+61573646 | Msa0304250:CDS |
| CAAGTTCCTTATCAATCTAA+GGG | 0.522342 | 2_3:+61573947 | Msa0304250:CDS |
| ATTCTTGTAATAATATAGCT+AGG | 0.537601 | 2_3:+61574221 | Msa0304250:three_prime_UTR |
| TTACCTCTGGTTCTTCTAGG+TGG | 0.537982 | 2_3:-61573054 | None:intergenic |
| AGAGATTCAACTATCCATCC+TGG | 0.540762 | 2_3:-61573713 | None:intergenic |
| CTATGTATGGTAGCAATGGT+TGG | 0.542393 | 2_3:+61572905 | Msa0304250:CDS |
| GAAATTGTTATCCATAACTC+TGG | 0.550258 | 2_3:+61572970 | Msa0304250:CDS |
| GGTGCTTTGTCTTATACAGA+TGG | 0.550446 | 2_3:+61569817 | Msa0304250:CDS |
| AAGGCAACAGAATCAATAAG+TGG | 0.552750 | 2_3:-61573018 | None:intergenic |
| TGAAACTGTCCAATTAGGTA+TGG | 0.554450 | 2_3:-61572638 | None:intergenic |
| TATCAATCTAAGGGCAAAGG+AGG | 0.558454 | 2_3:+61573956 | Msa0304250:CDS |
| ATACTCAACGAGATGGATGA+TGG | 0.558720 | 2_3:-61574177 | None:intergenic |
| AAAATGTAACAATGAGACAT+TGG | 0.564498 | 2_3:-61574386 | None:intergenic |
| TTTAGAGCTGATTATCCAGA+AGG | 0.574156 | 2_3:+61572946 | Msa0304250:CDS |
| CCTTATCAATCTAAGGGCAA+AGG | 0.577087 | 2_3:+61573953 | Msa0304250:CDS |
| GGTGCTTATGCTGTTAGGCT+AGG | 0.577781 | 2_3:+61572724 | Msa0304250:CDS |
| CAGACTATGTATGGTAGCAA+TGG | 0.586345 | 2_3:+61572901 | Msa0304250:CDS |
| CTGTATAAGACAAAGCACCT+TGG | 0.586814 | 2_3:-61569813 | None:intergenic |
| CTCATGGTCCATTACCAGGA+TGG | 0.588455 | 2_3:+61573699 | Msa0304250:CDS |
| GTTGAAGATGATCCAGCTTG+TGG | 0.588645 | 2_3:+61572994 | Msa0304250:CDS |
| ATTGATCCCACCACACATTG+AGG | 0.605497 | 2_3:+61573673 | Msa0304250:CDS |
| TAGAGCTGATTATCCAGAAG+GGG | 0.606448 | 2_3:+61572948 | Msa0304250:CDS |
| ATCAATCTAAGGGCAAAGGA+GGG | 0.607832 | 2_3:+61573957 | Msa0304250:CDS |
| GAGCATCCTCAATGTGTGGT+GGG | 0.618690 | 2_3:-61573679 | None:intergenic |
| AGAGAAGCTTAATGTGTCAG+TGG | 0.619453 | 2_3:+61572837 | Msa0304250:CDS |
| GAGCAATTGAACTTGTAGCA+GGG | 0.620186 | 2_3:+61573789 | Msa0304250:CDS |
| CCACACATTGAGGATGCTCA+TGG | 0.621467 | 2_3:+61573683 | Msa0304250:CDS |
| TTAGAGCTGATTATCCAGAA+GGG | 0.629847 | 2_3:+61572947 | Msa0304250:CDS |
| ATATTCCTCTCAATATGCCA+AGG | 0.634379 | 2_3:+61569796 | Msa0304250:CDS |
| AGGCAACAGAATCAATAAGT+GGG | 0.639484 | 2_3:-61573017 | None:intergenic |
| AAGCACCTTGGCATATTGAG+AGG | 0.644905 | 2_3:-61569801 | None:intergenic |
| TTCAATACGTGGCAATACTG+TGG | 0.645587 | 2_3:+61574341 | Msa0304250:three_prime_UTR |
| TGAGCATCCTCAATGTGTGG+TGG | 0.646759 | 2_3:-61573680 | None:intergenic |
| GCGAGCTGCACTGAACGTGA+TGG | 0.648755 | 2_3:-61572800 | None:intergenic |
| GAACACTTCACAGTACCAGA+AGG | 0.657571 | 2_3:+61573761 | Msa0304250:CDS |
| CATCACCAACTGCAAAAGTG+AGG | 0.664865 | 2_3:-61573865 | None:intergenic |
| GATGCTAATAATGCATGTGA+AGG | 0.670003 | 2_3:+61573884 | Msa0304250:CDS |
| CTTGTAATAATATAGCTAGG+AGG | 0.677897 | 2_3:+61574224 | Msa0304250:three_prime_UTR |
| GTGTTCCCAAATGCATCATG+GGG | 0.678543 | 2_3:+61573647 | Msa0304250:CDS |
| ATGTTGCAAATCAAAATGCA+TGG | 0.681924 | 2_3:+61574148 | Msa0304250:three_prime_UTR |
| ACCATGAAGAATGATAACTC+TGG | 0.691442 | 2_3:+61574052 | Msa0304250:CDS |
| CCATGAGCATCCTCAATGTG+TGG | 0.691876 | 2_3:-61573683 | None:intergenic |
| AACCCACCTAGAAGAACCAG+AGG | 0.693541 | 2_3:+61573051 | Msa0304250:CDS |
| ATGAGAAGTATTTCAATACG+TGG | 0.697286 | 2_3:+61574330 | Msa0304250:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTAAAAAAAAAAATTACAT+TGG | - | chr2_3:61569869-61569888 | None:intergenic | 10.0% |
| !!! | CAATGTAATTTTTTTTTTTA+AGG | + | chr2_3:61569867-61569886 | Msa0304250:intron | 10.0% |
| !!! | TAGTTTTAAAAGTAATATTT+TGG | - | chr2_3:61570284-61570303 | None:intergenic | 10.0% |
| !!! | AATGTTATTATTTATTTTAG+AGG | + | chr2_3:61570685-61570704 | Msa0304250:intron | 10.0% |
| !!! | TTTTTATTTTTGTTTTTTTC+AGG | - | chr2_3:61570889-61570908 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr2_3:61570966-61570985 | Msa0304250:intron | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr2_3:61570967-61570986 | Msa0304250:intron | 10.0% |
| !! | TAAATGTAAAATTACATAAA+AGG | + | chr2_3:61571175-61571194 | Msa0304250:intron | 10.0% |
| !! | CATAAATTGAAAAACATTAA+GGG | - | chr2_3:61570082-61570101 | None:intergenic | 15.0% |
| !! | ACATAAATTGAAAAACATTA+AGG | - | chr2_3:61570083-61570102 | None:intergenic | 15.0% |
| !!! | TATTGAATGTAAAGTTATTT+TGG | - | chr2_3:61570507-61570526 | None:intergenic | 15.0% |
| !! | TAATTTATTTAGATATTCGT+AGG | + | chr2_3:61570824-61570843 | Msa0304250:intron | 15.0% |
| !! | AATTTATTTAGATATTCGTA+GGG | + | chr2_3:61570825-61570844 | Msa0304250:intron | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr2_3:61570968-61570987 | Msa0304250:intron | 15.0% |
| !! | AAAATGGAATATATTGTATT+GGG | + | chr2_3:61570991-61571010 | Msa0304250:intron | 15.0% |
| !! | TTTCATTAAAATAACTGAAA+TGG | - | chr2_3:61571393-61571412 | None:intergenic | 15.0% |
| !!! | AAATGTGTTTTACTATATAA+AGG | + | chr2_3:61571498-61571517 | Msa0304250:intron | 15.0% |
| !!! | AATGTGTTTTACTATATAAA+GGG | + | chr2_3:61571499-61571518 | Msa0304250:intron | 15.0% |
| !!! | GGTTTTAATTAAAATAACAA+GGG | + | chr2_3:61571530-61571549 | Msa0304250:intron | 15.0% |
| !!! | CAACTTTTATTTATATATCT+AGG | + | chr2_3:61572364-61572383 | Msa0304250:intron | 15.0% |
| !!! | GAAAGAATTTTAAATTGATA+AGG | - | chr2_3:61572538-61572557 | None:intergenic | 15.0% |
| !!! | TATCAATTTAAAATTCTTTC+AGG | + | chr2_3:61572538-61572557 | Msa0304250:intron | 15.0% |
| !! | AAAAGGTGAAATTAAATAAA+GGG | + | chr2_3:61572767-61572786 | Msa0304250:CDS | 15.0% |
| !! | ACAAAAATATTCAATCATAT+TGG | - | chr2_3:61573464-61573483 | None:intergenic | 15.0% |
| !!! | TTGAATATTTTTGTACATTA+TGG | + | chr2_3:61573470-61573489 | Msa0304250:intron | 15.0% |
| !! | TTGATGTATGAAATTAAATT+TGG | + | chr2_3:61573545-61573564 | Msa0304250:intron | 15.0% |
| !!! | CTTTTAAGTAAGTAAACATT+TGG | - | chr2_3:61570007-61570026 | None:intergenic | 20.0% |
| !! | ACTTAAAAGTTTAACATTGA+TGG | + | chr2_3:61570018-61570037 | Msa0304250:intron | 20.0% |
| !!! | TTGATCATATATTTTGTGTT+TGG | + | chr2_3:61570113-61570132 | Msa0304250:intron | 20.0% |
| !! | AAAAGAAAAAGTTATTGCAT+TGG | - | chr2_3:61570224-61570243 | None:intergenic | 20.0% |
| !! | AATCAATACTGTAGTTAATA+AGG | + | chr2_3:61570303-61570322 | Msa0304250:intron | 20.0% |
| !! | TGTAGTTAATAAGGATAATT+TGG | + | chr2_3:61570312-61570331 | Msa0304250:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | - | chr2_3:61570346-61570365 | None:intergenic | 20.0% |
| !! | TGTATATTGCATAAATAAAC+AGG | - | chr2_3:61570804-61570823 | None:intergenic | 20.0% |
| !! | GAAAATGGAATATATTGTAT+TGG | + | chr2_3:61570990-61571009 | Msa0304250:intron | 20.0% |
| !!! | GTAGTATTAATTAGAGTTTT+AGG | + | chr2_3:61571024-61571043 | Msa0304250:intron | 20.0% |
| !! | GTAAAGTATAAAAACTGAAA+TGG | - | chr2_3:61571228-61571247 | None:intergenic | 20.0% |
| !!! | GGGTTTTAATTAAAATAACA+AGG | + | chr2_3:61571529-61571548 | Msa0304250:intron | 20.0% |
| !! | TAAAATAACAAGGGTAATAA+TGG | + | chr2_3:61571539-61571558 | Msa0304250:intron | 20.0% |
| !!! | TATATTTTCCACACAAAAAA+AGG | - | chr2_3:61572403-61572422 | None:intergenic | 20.0% |
| !!! | TTTTTTTGTGTGGAAAATAT+AGG | + | chr2_3:61572402-61572421 | Msa0304250:intron | 20.0% |
| !! | AGAAAAAATTTCCTATCATA+AGG | + | chr2_3:61572439-61572458 | Msa0304250:intron | 20.0% |
| !! | CAAAAGGTGAAATTAAATAA+AGG | + | chr2_3:61572766-61572785 | Msa0304250:CDS | 20.0% |
| !! | TGTATACAAATTTAGATACA+TGG | - | chr2_3:61573108-61573127 | None:intergenic | 20.0% |
| !! | TAGTAAAATACAATTAAGCT+AGG | - | chr2_3:61573154-61573173 | None:intergenic | 20.0% |
| !! | ATTCTTAATTTAATGCAAAG+AGG | + | chr2_3:61573512-61573531 | Msa0304250:intron | 20.0% |
| !!! | AACTATTGTTTTTGTTTGTT+TGG | + | chr2_3:61573578-61573597 | Msa0304250:intron | 20.0% |
| !!! | GTTTCCATTTTTCAATAAAT+TGG | - | chr2_3:61573609-61573628 | None:intergenic | 20.0% |
| !!! | AATTTTACATCATCAATAAC+AGG | - | chr2_3:61574091-61574110 | None:intergenic | 20.0% |
| !! | ATTCTTGTAATAATATAGCT+AGG | + | chr2_3:61574221-61574240 | Msa0304250:three_prime_UTR | 20.0% |
| ! | ATTACATTGGATATAGTGTT+GGG | - | chr2_3:61569856-61569875 | None:intergenic | 25.0% |
| ! | AATTACATTGGATATAGTGT+TGG | - | chr2_3:61569857-61569876 | None:intergenic | 25.0% |
| ! | CTAATAATCACAGTACATAA+AGG | - | chr2_3:61569946-61569965 | None:intergenic | 25.0% |
| ! | CTTTATGTACTGTGATTATT+AGG | + | chr2_3:61569944-61569963 | Msa0304250:intron | 25.0% |
| !!! | AAACGACACTCATTTTAAAA+CGG | + | chr2_3:61570395-61570414 | Msa0304250:intron | 25.0% |
| ! | TGTATAAATAAAGGGGAAAA+TGG | + | chr2_3:61570975-61570994 | Msa0304250:intron | 25.0% |
| !! | GATAAGCTAATTAAAGTGTT+TGG | + | chr2_3:61571127-61571146 | Msa0304250:intron | 25.0% |
| !! | AAAGTGTTTGGTAAAAATAG+CGG | + | chr2_3:61571139-61571158 | Msa0304250:intron | 25.0% |
| ! | TACTATATAAAGGGTAAAGT+TGG | + | chr2_3:61571508-61571527 | Msa0304250:intron | 25.0% |
| ! | ACTATATAAAGGGTAAAGTT+GGG | + | chr2_3:61571509-61571528 | Msa0304250:intron | 25.0% |
| !! | TTGAAATGACTCAGTTATTT+TGG | + | chr2_3:61571799-61571818 | Msa0304250:intron | 25.0% |
| !!! | TGAAATGACTCAGTTATTTT+GGG | + | chr2_3:61571800-61571819 | Msa0304250:intron | 25.0% |
| !!! | GGACACTTTTTTTAGAAAAT+GGG | + | chr2_3:61571821-61571840 | Msa0304250:intron | 25.0% |
| ! | GTGTATAATAGTACTTAATC+TGG | - | chr2_3:61572022-61572041 | None:intergenic | 25.0% |
| ! | TTGATACCAAAGTAACAAAA+AGG | + | chr2_3:61572110-61572129 | Msa0304250:intron | 25.0% |
| !!! | TATTGTCCTTTTTGTTACTT+TGG | - | chr2_3:61572119-61572138 | None:intergenic | 25.0% |
| !!! | ATTCTAGAACAATATAGCAT+TGG | + | chr2_3:61572227-61572246 | Msa0304250:intron | 25.0% |
| !!! | TATGTATACCTTTTTTTGTG+TGG | + | chr2_3:61572392-61572411 | Msa0304250:intron | 25.0% |
| ! | AATTGTTTGAACCTTATGAT+AGG | - | chr2_3:61572453-61572472 | None:intergenic | 25.0% |
| ! | TACGTTGAATACATAAAATC+AGG | + | chr2_3:61572664-61572683 | Msa0304250:CDS | 25.0% |
| ! | ATAAAATCAGGACAAAAACA+AGG | + | chr2_3:61572676-61572695 | Msa0304250:CDS | 25.0% |
| ! | TGAAGCATACATTAAACAAA+AGG | + | chr2_3:61572750-61572769 | Msa0304250:CDS | 25.0% |
| ! | GCATATATTTATGATGTGTT+TGG | + | chr2_3:61573318-61573337 | Msa0304250:intron | 25.0% |
| ! | ACTCCATACATGTAATTAAA+CGG | + | chr2_3:61573437-61573456 | Msa0304250:intron | 25.0% |
| !! | AAAAATGGAAACTTTGAAGA+AGG | + | chr2_3:61573617-61573636 | Msa0304250:CDS | 25.0% |
| !!! | TTTGATTTGCAACATTACTT+AGG | - | chr2_3:61574143-61574162 | None:intergenic | 25.0% |
| ! | AATAAAAATACTCAACGAGA+TGG | - | chr2_3:61574187-61574206 | None:intergenic | 25.0% |
| AGGAACTATATGCAATGTAA+TGG | + | chr2_3:61569887-61569906 | Msa0304250:intron | 30.0% | |
| ATATGCAATGTAATGGTGTT+TGG | + | chr2_3:61569894-61569913 | Msa0304250:intron | 30.0% | |
| TGAAGTACAACAATGAAGAA+AGG | - | chr2_3:61570044-61570063 | None:intergenic | 30.0% | |
| ! | TGTTCAGAGTATTAATTGGA+GGG | - | chr2_3:61570255-61570274 | None:intergenic | 30.0% |
| ! | GTAGTGTTCAGAGTATTAAT+TGG | - | chr2_3:61570259-61570278 | None:intergenic | 30.0% |
| !! | ATTCGATTCAGCTCATTTTT+AGG | - | chr2_3:61570617-61570636 | None:intergenic | 30.0% |
| CGATACATTTGTAGTATCAT+GGG | - | chr2_3:61570866-61570885 | None:intergenic | 30.0% | |
| ATATGTGTGAAAAACCAAAC+TGG | - | chr2_3:61570946-61570965 | None:intergenic | 30.0% | |
| GACGTAATATACATAAGAAC+TGG | + | chr2_3:61571431-61571450 | Msa0304250:intron | 30.0% | |
| TTGACAAAAAAAGCTCTGTT+TGG | - | chr2_3:61571687-61571706 | None:intergenic | 30.0% | |
| ! | CTATAAGCTATAAGCTCTTT+TGG | + | chr2_3:61571720-61571739 | Msa0304250:intron | 30.0% |
| AAACAGACCCTTATTGTATT+GGG | + | chr2_3:61571753-61571772 | Msa0304250:intron | 30.0% | |
| CATCATTCCCAATACAATAA+GGG | - | chr2_3:61571763-61571782 | None:intergenic | 30.0% | |
| TCATCATTCCCAATACAATA+AGG | - | chr2_3:61571002-61571021 | None:intergenic | 30.0% | |
| !!! | GGGACACTTTTTTTAGAAAA+TGG | + | chr2_3:61571820-61571839 | Msa0304250:intron | 30.0% |
| AGAAAATGGGTCAGATATTT+CGG | + | chr2_3:61571834-61571853 | Msa0304250:intron | 30.0% | |
| CAAGTCAAACAACATAAGAA+CGG | - | chr2_3:61572093-61572112 | None:intergenic | 30.0% | |
| AAATGTGATGTGAGAATATC+AGG | + | chr2_3:61572142-61572161 | Msa0304250:intron | 30.0% | |
| !!! | TCTTTTTCAAGAGCACTTTT+TGG | - | chr2_3:61572339-61572358 | None:intergenic | 30.0% |
| ! | TAATCTCTTTTCTCAGAAGT+TGG | - | chr2_3:61572865-61572884 | None:intergenic | 30.0% |
| ! | ACTTCTGAGAAAAGAGATTA+TGG | + | chr2_3:61572865-61572884 | Msa0304250:CDS | 30.0% |
| ATTCCAATACAGACTATGTA+TGG | + | chr2_3:61572892-61572911 | Msa0304250:CDS | 30.0% | |
| GAAATTGTTATCCATAACTC+TGG | + | chr2_3:61572970-61572989 | Msa0304250:CDS | 30.0% | |
| TTATGATGTGTTTGGATTGA+CGG | + | chr2_3:61573326-61573345 | Msa0304250:intron | 30.0% | |
| ! | GTTAATGTGATTTTCGCAAT+TGG | + | chr2_3:61573372-61573391 | Msa0304250:intron | 30.0% |
| GCAGCCAATTTATTGAAAAA+TGG | + | chr2_3:61573602-61573621 | Msa0304250:intron | 30.0% | |
| ! | GACATAAACTTTTCCAATTG+TGG | - | chr2_3:61573846-61573865 | None:intergenic | 30.0% |
| TCAAGTTCCTTATCAATCTA+AGG | + | chr2_3:61573946-61573965 | Msa0304250:CDS | 30.0% | |
| CAAGTTCCTTATCAATCTAA+GGG | + | chr2_3:61573947-61573966 | Msa0304250:CDS | 30.0% | |
| TCATGGTGTAAAATGTACTT+AGG | - | chr2_3:61574039-61574058 | None:intergenic | 30.0% | |
| ATTACTTAGGTATGCTTGTT+GGG | - | chr2_3:61574130-61574149 | None:intergenic | 30.0% | |
| ATGTTGCAAATCAAAATGCA+TGG | + | chr2_3:61574148-61574167 | Msa0304250:three_prime_UTR | 30.0% | |
| CTTGTAATAATATAGCTAGG+AGG | + | chr2_3:61574224-61574243 | Msa0304250:three_prime_UTR | 30.0% | |
| !! | ATGAGAAGTATTTCAATACG+TGG | + | chr2_3:61574330-61574349 | Msa0304250:three_prime_UTR | 30.0% |
| ATATTCCTCTCAATATGCCA+AGG | + | chr2_3:61569796-61569815 | Msa0304250:CDS | 35.0% | |
| !!! | GACACTCATTTTGAAACAGA+GGG | - | chr2_3:61570153-61570172 | None:intergenic | 35.0% |
| ! | GTGTTCAGAGTATTAATTGG+AGG | - | chr2_3:61570256-61570275 | None:intergenic | 35.0% |
| !!! | GACACTCATTTTAAAACGGA+TGG | + | chr2_3:61570399-61570418 | Msa0304250:intron | 35.0% |
| GCGATACATTTGTAGTATCA+TGG | - | chr2_3:61570867-61570886 | None:intergenic | 35.0% | |
| !!! | TTAGAGTTTTAGGCTCTGTT+TGG | + | chr2_3:61571034-61571053 | Msa0304250:intron | 35.0% |
| GCTCTGTTTGGTAAAAATAG+CGG | + | chr2_3:61571046-61571065 | Msa0304250:intron | 35.0% | |
| ACGCAGGGAAAAAAATATAG+AGG | + | chr2_3:61571456-61571475 | Msa0304250:intron | 35.0% | |
| ! | TAAGCTATAAGCTCTTTTGG+TGG | + | chr2_3:61571723-61571742 | Msa0304250:intron | 35.0% |
| CAATACAATAAGGGTCTGTT+TGG | - | chr2_3:61571754-61571773 | None:intergenic | 35.0% | |
| CAAACAGACCCTTATTGTAT+TGG | + | chr2_3:61571752-61571771 | Msa0304250:intron | 35.0% | |
| GAAAATGGGTCAGATATTTC+GGG | + | chr2_3:61571835-61571854 | Msa0304250:intron | 35.0% | |
| !! | GTTCTAGAATCTAGATCTCT+AGG | - | chr2_3:61572217-61572236 | None:intergenic | 35.0% |
| CTAACATGTTCCTTATCACA+TGG | + | chr2_3:61572303-61572322 | Msa0304250:intron | 35.0% | |
| TGTGGAAAATATAGGTCTCA+TGG | + | chr2_3:61572410-61572429 | Msa0304250:intron | 35.0% | |
| GTGGAAAATATAGGTCTCAT+GGG | + | chr2_3:61572411-61572430 | Msa0304250:intron | 35.0% | |
| TGGAAAATATAGGTCTCATG+GGG | + | chr2_3:61572412-61572431 | Msa0304250:intron | 35.0% | |
| !! | CTTTCAGGTTTATTGCCAAA+TGG | + | chr2_3:61572553-61572572 | Msa0304250:intron | 35.0% |
| !! | TCCAAAAGCATCAAACCTAA+AGG | + | chr2_3:61572591-61572610 | Msa0304250:CDS | 35.0% |
| !! | CCAAAAGCATCAAACCTAAA+GGG | + | chr2_3:61572592-61572611 | Msa0304250:CDS | 35.0% |
| TGAAACTGTCCAATTAGGTA+TGG | - | chr2_3:61572641-61572660 | None:intergenic | 35.0% | |
| ATACCTAATTGGACAGTTTC+AGG | + | chr2_3:61572640-61572659 | Msa0304250:CDS | 35.0% | |
| TATCCTGAAACTGTCCAATT+AGG | - | chr2_3:61572646-61572665 | None:intergenic | 35.0% | |
| ! | AAAACAAGGTGACATGCTTT+TGG | + | chr2_3:61572690-61572709 | Msa0304250:CDS | 35.0% |
| CTACCATACATAGTCTGTAT+TGG | - | chr2_3:61572898-61572917 | None:intergenic | 35.0% | |
| TATGTATGGTAGCAATGGTT+GGG | + | chr2_3:61572906-61572925 | Msa0304250:CDS | 35.0% | |
| ! | TTTAGAGCTGATTATCCAGA+AGG | + | chr2_3:61572946-61572965 | Msa0304250:CDS | 35.0% |
| TTAGAGCTGATTATCCAGAA+GGG | + | chr2_3:61572947-61572966 | Msa0304250:CDS | 35.0% | |
| AGGCAACAGAATCAATAAGT+GGG | - | chr2_3:61573020-61573039 | None:intergenic | 35.0% | |
| AAGGCAACAGAATCAATAAG+TGG | - | chr2_3:61573021-61573040 | None:intergenic | 35.0% | |
| !! | TATTGATTCTGTTGCCTTGA+AGG | + | chr2_3:61573023-61573042 | Msa0304250:CDS | 35.0% |
| !! | AAATTACCTCTGGTTCTTCT+AGG | - | chr2_3:61573060-61573079 | None:intergenic | 35.0% |
| TAGGGAACAAAAATTACCTC+TGG | - | chr2_3:61573070-61573089 | None:intergenic | 35.0% | |
| GGACCGTTTAATTACATGTA+TGG | - | chr2_3:61573443-61573462 | None:intergenic | 35.0% | |
| ! | TCAATTGCTCTTTTTCCTTC+TGG | - | chr2_3:61573779-61573798 | None:intergenic | 35.0% |
| GATGCTAATAATGCATGTGA+AGG | + | chr2_3:61573884-61573903 | Msa0304250:CDS | 35.0% | |
| ! | TAGAGGCAAACTTCGTTTTA+AGG | + | chr2_3:61573985-61574004 | Msa0304250:CDS | 35.0% |
| ACCATGAAGAATGATAACTC+TGG | + | chr2_3:61574052-61574071 | Msa0304250:CDS | 35.0% | |
| ACCAGAGTTATCATTCTTCA+TGG | - | chr2_3:61574056-61574075 | None:intergenic | 35.0% | |
| CATTACTTAGGTATGCTTGT+TGG | - | chr2_3:61574131-61574150 | None:intergenic | 35.0% | |
| ! | CTGTATAAGACAAAGCACCT+TGG | - | chr2_3:61569816-61569835 | None:intergenic | 40.0% |
| GGTGCTTTGTCTTATACAGA+TGG | + | chr2_3:61569817-61569836 | Msa0304250:CDS | 40.0% | |
| !!! | CGACACTCATTTTGAAACAG+AGG | - | chr2_3:61570154-61570173 | None:intergenic | 40.0% |
| ! | CAAACTGGCTCAGATAAAAC+GGG | - | chr2_3:61570931-61570950 | None:intergenic | 40.0% |
| ! | CCAAACTGGCTCAGATAAAA+CGG | - | chr2_3:61570932-61570951 | None:intergenic | 40.0% |
| TACATAAGAACTGGAAACGC+AGG | + | chr2_3:61571440-61571459 | Msa0304250:intron | 40.0% | |
| ACATAAGAACTGGAAACGCA+GGG | + | chr2_3:61571441-61571460 | Msa0304250:intron | 40.0% | |
| CTATAAGCTCAAACGCTACT+TGG | + | chr2_3:61571585-61571604 | Msa0304250:intron | 40.0% | |
| CAATAAGGGTCTGTTTGGTA+AGG | - | chr2_3:61571749-61571768 | None:intergenic | 40.0% | |
| ATCCCTTTCGTCAGATCTTA+AGG | + | chr2_3:61571937-61571956 | Msa0304250:intron | 40.0% | |
| TGCCTTAAGATCTGACGAAA+GGG | - | chr2_3:61571942-61571961 | None:intergenic | 40.0% | |
| GCATTGGAAATCTCTTCACA+TGG | + | chr2_3:61572243-61572262 | Msa0304250:intron | 40.0% | |
| TCTCTTCACATGGCTTACAA+AGG | + | chr2_3:61572253-61572272 | Msa0304250:intron | 40.0% | |
| AGGAACATGTTAGTAAGTGC+AGG | - | chr2_3:61572296-61572315 | None:intergenic | 40.0% | |
| ACATGTTCCTTATCACATGG+TGG | + | chr2_3:61572306-61572325 | Msa0304250:intron | 40.0% | |
| TCTTGTTCCACCATGTGATA+AGG | - | chr2_3:61572316-61572335 | None:intergenic | 40.0% | |
| CCAACTTCAAAGTCACCATT+TGG | - | chr2_3:61572571-61572590 | None:intergenic | 40.0% | |
| !! | CCAAATGGTGACTTTGAAGT+TGG | + | chr2_3:61572568-61572587 | Msa0304250:CDS | 40.0% |
| !! | CCCTTTAGGTTTGATGCTTT+TGG | - | chr2_3:61572595-61572614 | None:intergenic | 40.0% |
| CCAATTAGGTATGGCATCAT+GGG | - | chr2_3:61572632-61572651 | None:intergenic | 40.0% | |
| TCCAATTAGGTATGGCATCA+TGG | - | chr2_3:61572633-61572652 | None:intergenic | 40.0% | |
| !! | ATGCTTTTGGTTGTACCAGA+AGG | + | chr2_3:61572703-61572722 | Msa0304250:CDS | 40.0% |
| AGAGAAGCTTAATGTGTCAG+TGG | + | chr2_3:61572837-61572856 | Msa0304250:CDS | 40.0% | |
| CAGACTATGTATGGTAGCAA+TGG | + | chr2_3:61572901-61572920 | Msa0304250:CDS | 40.0% | |
| CTATGTATGGTAGCAATGGT+TGG | + | chr2_3:61572905-61572924 | Msa0304250:CDS | 40.0% | |
| GTTGGGAATCATTTGCTTGT+GGG | + | chr2_3:61572923-61572942 | Msa0304250:CDS | 40.0% | |
| TAGAGCTGATTATCCAGAAG+GGG | + | chr2_3:61572948-61572967 | Msa0304250:CDS | 40.0% | |
| TGGATAACAATTTCCCCTTC+TGG | - | chr2_3:61572964-61572983 | None:intergenic | 40.0% | |
| CATCTTCAACACCAGAGTTA+TGG | - | chr2_3:61572984-61573003 | None:intergenic | 40.0% | |
| TGGACATGCACTTCTATGTA+GGG | - | chr2_3:61573088-61573107 | None:intergenic | 40.0% | |
| ATGGACATGCACTTCTATGT+AGG | - | chr2_3:61573089-61573108 | None:intergenic | 40.0% | |
| GATGCATTTGGGAACACATA+TGG | - | chr2_3:61573644-61573663 | None:intergenic | 40.0% | |
| ATGTGTTCCCAAATGCATCA+TGG | + | chr2_3:61573645-61573664 | Msa0304250:CDS | 40.0% | |
| TGTGTTCCCAAATGCATCAT+GGG | + | chr2_3:61573646-61573665 | Msa0304250:CDS | 40.0% | |
| ATACTCCCCATGATGCATTT+GGG | - | chr2_3:61573655-61573674 | None:intergenic | 40.0% | |
| AATACTCCCCATGATGCATT+TGG | - | chr2_3:61573656-61573675 | None:intergenic | 40.0% | |
| TCAACTATCCATCCTGGTAA+TGG | - | chr2_3:61573710-61573729 | None:intergenic | 40.0% | |
| AGAGATTCAACTATCCATCC+TGG | - | chr2_3:61573716-61573735 | None:intergenic | 40.0% | |
| AGAGCAATTGAACTTGTAGC+AGG | + | chr2_3:61573788-61573807 | Msa0304250:CDS | 40.0% | |
| GAGCAATTGAACTTGTAGCA+GGG | + | chr2_3:61573789-61573808 | Msa0304250:CDS | 40.0% | |
| CAAGAAGTCTTCACCACAAT+TGG | + | chr2_3:61573830-61573849 | Msa0304250:CDS | 40.0% | |
| !! | TATGTCCTCACTTTTGCAGT+TGG | + | chr2_3:61573860-61573879 | Msa0304250:CDS | 40.0% |
| !! | ATGACTGTAGAAGCATTTGC+TGG | + | chr2_3:61573911-61573930 | Msa0304250:CDS | 40.0% |
| CCTTTGCCCTTAGATTGATA+AGG | - | chr2_3:61573956-61573975 | None:intergenic | 40.0% | |
| CCTTATCAATCTAAGGGCAA+AGG | + | chr2_3:61573953-61573972 | Msa0304250:CDS | 40.0% | |
| TATCAATCTAAGGGCAAAGG+AGG | + | chr2_3:61573956-61573975 | Msa0304250:CDS | 40.0% | |
| ATCAATCTAAGGGCAAAGGA+GGG | + | chr2_3:61573957-61573976 | Msa0304250:CDS | 40.0% | |
| !! | GATAACTCTGGTTCTCTTTG+TGG | + | chr2_3:61574064-61574083 | Msa0304250:CDS | 40.0% |
| ATACTCAACGAGATGGATGA+TGG | - | chr2_3:61574180-61574199 | None:intergenic | 40.0% | |
| TTCAATACGTGGCAATACTG+TGG | + | chr2_3:61574341-61574360 | Msa0304250:three_prime_UTR | 40.0% | |
| AAGCACCTTGGCATATTGAG+AGG | - | chr2_3:61569804-61569823 | None:intergenic | 45.0% | |
| ! | CCGTTTTATCTGAGCCAGTT+TGG | + | chr2_3:61570929-61570948 | Msa0304250:intron | 45.0% |
| AATGGGTCAGATATTTCGGG+AGG | + | chr2_3:61571838-61571857 | Msa0304250:intron | 45.0% | |
| ATGGGTCAGATATTTCGGGA+GGG | + | chr2_3:61571839-61571858 | Msa0304250:intron | 45.0% | |
| ATCTGACGAAAGGGATGTTG+TGG | - | chr2_3:61571933-61571952 | None:intergenic | 45.0% | |
| GTGCCTTAAGATCTGACGAA+AGG | - | chr2_3:61571943-61571962 | None:intergenic | 45.0% | |
| TGTTAGTAAGTGCAGGCTGT+GGG | - | chr2_3:61572289-61572308 | None:intergenic | 45.0% | |
| ATGTTAGTAAGTGCAGGCTG+TGG | - | chr2_3:61572290-61572309 | None:intergenic | 45.0% | |
| TTGTCACTACTGTGCCCTTT+AGG | - | chr2_3:61572609-61572628 | None:intergenic | 45.0% | |
| CCCATGATGCCATACCTAAT+TGG | + | chr2_3:61572629-61572648 | Msa0304250:CDS | 45.0% | |
| CTAACAGCATAAGCACCTTC+TGG | - | chr2_3:61572721-61572740 | None:intergenic | 45.0% | |
| !! | CAGAAGGTGCTTATGCTGTT+AGG | + | chr2_3:61572719-61572738 | Msa0304250:CDS | 45.0% |
| GGTTGGGAATCATTTGCTTG+TGG | + | chr2_3:61572922-61572941 | Msa0304250:CDS | 45.0% | |
| GTTGAAGATGATCCAGCTTG+TGG | + | chr2_3:61572994-61573013 | Msa0304250:CDS | 45.0% | |
| ! | AGGTGGGTTCAAAACCTTCA+AGG | - | chr2_3:61573040-61573059 | None:intergenic | 45.0% |
| !! | TACCTCTGGTTCTTCTAGGT+GGG | - | chr2_3:61573056-61573075 | None:intergenic | 45.0% |
| !! | TTACCTCTGGTTCTTCTAGG+TGG | - | chr2_3:61573057-61573076 | None:intergenic | 45.0% |
| GTGTTCCCAAATGCATCATG+GGG | + | chr2_3:61573647-61573666 | Msa0304250:CDS | 45.0% | |
| ATTGATCCCACCACACATTG+AGG | + | chr2_3:61573673-61573692 | Msa0304250:CDS | 45.0% | |
| GAACACTTCACAGTACCAGA+AGG | + | chr2_3:61573761-61573780 | Msa0304250:CDS | 45.0% | |
| CATCACCAACTGCAAAAGTG+AGG | - | chr2_3:61573868-61573887 | None:intergenic | 45.0% | |
| CGACAAGACGTACTAGGATT+AGG | + | chr2_3:61574011-61574030 | Msa0304250:CDS | 45.0% | |
| !!! | ATTTTTTTTTACAAATAAAT+AGG | - | chr2_3:61572051-61572070 | None:intergenic | 5.0% |
| CTCAGATAAAACGGGACGGA+GGG | - | chr2_3:61570923-61570942 | None:intergenic | 50.0% | |
| CTGGCTCAGATAAAACGGGA+CGG | - | chr2_3:61570927-61570946 | None:intergenic | 50.0% | |
| GGTGCTTATGCTGTTAGGCT+AGG | + | chr2_3:61572724-61572743 | Msa0304250:CDS | 50.0% | |
| TCAATAAGTGGGCCACAAGC+TGG | - | chr2_3:61573009-61573028 | None:intergenic | 50.0% | |
| AACCCACCTAGAAGAACCAG+AGG | + | chr2_3:61573051-61573070 | Msa0304250:CDS | 50.0% | |
| GAGCATCCTCAATGTGTGGT+GGG | - | chr2_3:61573682-61573701 | None:intergenic | 50.0% | |
| TGAGCATCCTCAATGTGTGG+TGG | - | chr2_3:61573683-61573702 | None:intergenic | 50.0% | |
| CCATGAGCATCCTCAATGTG+TGG | - | chr2_3:61573686-61573705 | None:intergenic | 50.0% | |
| CCACACATTGAGGATGCTCA+TGG | + | chr2_3:61573683-61573702 | Msa0304250:CDS | 50.0% | |
| GATGCTCATGGTCCATTACC+AGG | + | chr2_3:61573695-61573714 | Msa0304250:CDS | 50.0% | |
| CTCATGGTCCATTACCAGGA+TGG | + | chr2_3:61573699-61573718 | Msa0304250:CDS | 50.0% | |
| !! | GGCAAAGGAGGGTTTGTTAG+AGG | + | chr2_3:61573968-61573987 | Msa0304250:CDS | 50.0% |
| AGGCTACGACAAGACGTACT+AGG | + | chr2_3:61574005-61574024 | Msa0304250:CDS | 50.0% | |
| GCTCAGATAAAACGGGACGG+AGG | - | chr2_3:61570924-61570943 | None:intergenic | 55.0% | |
| GGTCAGATATTTCGGGAGGG+AGG | + | chr2_3:61571842-61571861 | Msa0304250:intron | 55.0% | |
| GCGAGCTGCACTGAACGTGA+TGG | - | chr2_3:61572803-61572822 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 61569718 | 61574402 | 61569718 | ID=Msa0304250;Name=Msa0304250 |
| chr2_3 | mRNA | 61569718 | 61574402 | 61569718 | ID=Msa0304250-mRNA-1;Parent=Msa0304250;Name=Msa0304250-mRNA-1;_AED=0.01;_eAED=0.01;_QI=51|1|1|1|0.5|0.66|3|258|373 |
| chr2_3 | exon | 61569718 | 61569838 | 61569718 | ID=Msa0304250-mRNA-1:exon:20370;Parent=Msa0304250-mRNA-1 |
| chr2_3 | exon | 61572560 | 61573072 | 61572560 | ID=Msa0304250-mRNA-1:exon:20371;Parent=Msa0304250-mRNA-1 |
| chr2_3 | exon | 61573606 | 61574402 | 61573606 | ID=Msa0304250-mRNA-1:exon:20372;Parent=Msa0304250-mRNA-1 |
| chr2_3 | five_prime_UTR | 61569718 | 61569768 | 61569718 | ID=Msa0304250-mRNA-1:five_prime_utr;Parent=Msa0304250-mRNA-1 |
| chr2_3 | CDS | 61569769 | 61569838 | 61569769 | ID=Msa0304250-mRNA-1:cds;Parent=Msa0304250-mRNA-1 |
| chr2_3 | CDS | 61572560 | 61573072 | 61572560 | ID=Msa0304250-mRNA-1:cds;Parent=Msa0304250-mRNA-1 |
| chr2_3 | CDS | 61573606 | 61574144 | 61573606 | ID=Msa0304250-mRNA-1:cds;Parent=Msa0304250-mRNA-1 |
| chr2_3 | three_prime_UTR | 61574145 | 61574402 | 61574145 | ID=Msa0304250-mRNA-1:three_prime_utr;Parent=Msa0304250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
