AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0128350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0128350 MtrunA17_Chr1g0195181 78.253 561 32 4 389 859 20 580 0.0 790
Msa0128350 MtrunA17_Chr1g0195181 61.942 381 126 4 25 389 204 581 1.54e-132 408
Msa0128350 MtrunA17_Chr1g0195181 55.839 274 101 5 1 256 2 273 2.60e-66 232
Msa0128350 MtrunA17_Chr1g0195181 51.099 182 85 3 78 257 25 204 1.81e-31 130
Msa0128350 MtrunA17_Chr1g0195171 77.074 458 45 6 1 401 2 456 0.0 646
Msa0128350 MtrunA17_Chr1g0195171 60.732 410 149 3 462 859 30 439 1.70e-142 429
Msa0128350 MtrunA17_Chr1g0195201 46.324 136 69 3 258 389 44 179 8.40e-31 119
Msa0128350 MtrunA17_Chr1g0195201 40.667 150 76 3 722 859 30 178 1.01e-27 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0128350 AT2G47540.1 49.231 130 59 3 260 382 33 162 6.73e-34 128
Msa0128350 AT2G47540.1 47.482 139 55 4 739 859 33 171 7.40e-32 122
Msa0128350 AT4G02270.1 50.820 122 57 2 264 382 40 161 5.70e-32 122
Msa0128350 AT4G02270.1 45.902 122 55 2 743 853 40 161 1.27e-26 107
Msa0128350 AT2G47530.1 43.846 130 61 6 264 385 55 180 3.26e-21 92.4
Msa0128350 AT2G47530.1 39.735 151 71 5 728 858 32 182 5.76e-21 91.7
Msa0128350 AT1G54970.1 36.885 122 68 3 265 384 213 327 1.86e-19 91.3
Msa0128350 AT1G54970.1 36.923 130 66 5 739 858 207 330 1.40e-16 82.4
Msa0128350 AT3G62680.1 35.246 122 69 3 265 381 187 303 1.24e-15 79.3
Msa0128350 AT3G62680.1 37.607 117 65 3 744 852 187 303 7.11e-15 77.0

Find 176 sgRNAs with CRISPR-Local

Find 859 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCATACTCATAATCTATTT+TGG 0.075431 1_3:-58020061 None:intergenic
TGCATAGCCATAATCTATTT+TGG 0.104033 1_3:-58019641 None:intergenic
CCCAAATCCAAAACTGATTA+TGG 0.125943 1_3:+58019949 Msa0128350:CDS
ACTTGGGGTTCTCAATCTTT+AGG 0.178557 1_3:-58009023 None:intergenic
ATTTGGGTTTCCCATTCTTT+AGG 0.180183 1_3:-58008810 None:intergenic
GGCATACTCATAATCTGTTT+TGG 0.183549 1_3:-58019851 None:intergenic
CCTAAACCTGAAACAAATTA+TGG 0.184787 1_3:+58008670 Msa0128350:CDS
CCATACCCATAATTTGTTTC+AGG 0.194509 1_3:-58008676 None:intergenic
GACTTTGGTTTCTCAATCTT+GGG 0.198613 1_3:-58019775 None:intergenic
CCATAATTTGTTTCAGGTTT+AGG 0.212689 1_3:-58008670 None:intergenic
ATTGCCTCTGCAACTGATTA+TGG 0.213421 1_3:+58008490 Msa0128350:CDS
GACTTTGGTTTCTCGATCTT+GGG 0.215411 1_3:-58019880 None:intergenic
GACTTTGGTTTCTCGATCTT+GGG 0.215411 1_3:-58020090 None:intergenic
GCAGGGGCATATTCATAATT+TGG 0.217355 1_3:-58019751 None:intergenic
CTTCTTATCTACTTCAGTTT+GGG 0.220960 1_3:-58019269 None:intergenic
AGACTTTGGTTTCTCGATCT+TGG 0.227468 1_3:-58019881 None:intergenic
AGACTTTGGTTTCTCGATCT+TGG 0.227468 1_3:-58020091 None:intergenic
GGACTTTGGTTTCTCAATCT+TGG 0.229209 1_3:-58019776 None:intergenic
TTCATAATTTGGTTTAGATT+TGG 0.231424 1_3:-58019740 None:intergenic
CCCAAACGTAAAACAAATTA+TGG 0.232973 1_3:+58008988 Msa0128350:CDS
TTGTCTGGGTTTGTGGTATT+TGG 0.245476 1_3:-58008958 None:intergenic
TTTATAATCTGTATCAAGTT+TGG 0.255242 1_3:-58020205 None:intergenic
TCATGTTCTAAGAACCATTA+TGG 0.257276 1_3:-58009802 None:intergenic
AGGTGTTTGTAATATGTTTC+GGG 0.258454 1_3:-58019484 None:intergenic
GGAACTTTACAAATATTTAA+TGG 0.258953 1_3:-58009662 None:intergenic
ACTATAAGCAAAATGAGTTT+TGG 0.261910 1_3:-58008782 None:intergenic
AATGAAAATTTACCTTGAAT+TGG 0.262950 1_3:-58009288 None:intergenic
GGACTTGGGTTTCTCAATCT+TGG 0.263680 1_3:-58019671 None:intergenic
TTCGTAATCTATATCGAGTT+TGG 0.265120 1_3:-58019374 None:intergenic
GGAATAATCATAATTTGATT+TGG 0.268799 1_3:-58020160 None:intergenic
TTGTAATATGTTTCGGGTTC+AGG 0.269044 1_3:-58019478 None:intergenic
ATTATAATCCGCTTCAAGTT+TGG 0.269093 1_3:-58009145 None:intergenic
GATATAGGTTTCTCAATCTT+TGG 0.271001 1_3:-58008706 None:intergenic
AGTTTGGATTTCTCGATCTT+TGG 0.271249 1_3:-58009129 None:intergenic
ACTTCTTATCTACTTCAGTT+TGG 0.271626 1_3:-58019270 None:intergenic
CTTGGGGTTCTCAATCTTTA+GGG 0.273169 1_3:-58009022 None:intergenic
ACATGTCTCAATCCTGTTAT+AGG 0.275172 1_3:-58020605 None:intergenic
TCATAATTTGGTTTAGATTT+GGG 0.280504 1_3:-58019739 None:intergenic
TTTGGGTTTCCCATTCTTTA+GGG 0.280971 1_3:-58008809 None:intergenic
TCTATAATTTACTTTGGGTT+TGG 0.285320 1_3:-58019428 None:intergenic
CCCAAACCCAAAATAGATTA+TGG 0.290684 1_3:+58019634 Msa0128350:CDS
GGCATACCCATAATCAGTTT+TGG 0.293211 1_3:-58019956 None:intergenic
TTGTAGACTGCTTCCGATAT+AGG 0.296413 1_3:-58008721 None:intergenic
ACTATACTCATAATTTGTTT+TGG 0.297520 1_3:-58019329 None:intergenic
GGTTTGGGAACTTTATAGTT+TGG 0.300710 1_3:-58019412 None:intergenic
GAATAATCATAATTTGATTT+GGG 0.301569 1_3:-58020159 None:intergenic
CTATAATTTACTTTGGGTTT+GGG 0.305045 1_3:-58019427 None:intergenic
GACTTAGGCTTCTCAACCTT+TGG 0.305671 1_3:-58019565 None:intergenic
CGTTTGGGAACATCATTGTC+TGG 0.317563 1_3:-58008973 None:intergenic
ATACCATATTTATCATAGTT+TGG 0.325263 1_3:-58008574 None:intergenic
GACTTGGGTTTCTCAATCTT+GGG 0.329949 1_3:-58019670 None:intergenic
TGTGTAAACTGCATCGGATT+TGG 0.333337 1_3:-58008827 None:intergenic
CACACCAAACCCCACAAAAC+TGG 0.333545 1_3:+58019705 Msa0128350:CDS
AAACCAAACTATGATAAATA+TGG 0.336950 1_3:+58008571 Msa0128350:CDS
GGTTTGGGAACTTCATAGTT+TGG 0.347432 1_3:-58020039 None:intergenic
TTTGTAAACTGCTTCGGACT+TGG 0.347445 1_3:-58009040 None:intergenic
GGTTCAGACTTCTCAGTGTT+TGG 0.348682 1_3:-58019247 None:intergenic
ATGAAAATTTACCTTGAATT+GGG 0.352232 1_3:-58009287 None:intergenic
GACTTCTCAGTGTTTGGTGC+TGG 0.357722 1_3:-58019241 None:intergenic
TGTGAGGGGTGCAGGGGCTG+TGG 0.362496 1_3:+58009472 Msa0128350:intron
GTGTAAACTGCATCGGATTT+GGG 0.364522 1_3:-58008826 None:intergenic
GGTTGGGGAACTTCATAGTC+TGG 0.370057 1_3:-58019514 None:intergenic
CGTAAAACAAATTATGGATA+TGG 0.373220 1_3:+58008994 Msa0128350:CDS
GCATGGCTGAATACTGATAT+AGG 0.379611 1_3:-58009542 None:intergenic
TTGTAAACTGCTTCGGACTT+GGG 0.387070 1_3:-58009039 None:intergenic
GGGAACTTCATAGTCTGGTT+TGG 0.390620 1_3:-58019509 None:intergenic
GGTTTGGGAACTTCATAGTC+TGG 0.391563 1_3:-58019619 None:intergenic
GGTTTGGGAACTTCATAGTC+TGG 0.391563 1_3:-58019829 None:intergenic
TTATAATCTGTATCAAGTTT+GGG 0.394940 1_3:-58020204 None:intergenic
GATTTGGGAATTTCATAGTC+TGG 0.395558 1_3:-58020144 None:intergenic
CCCACAATCATTAGTGTTCA+AGG 0.397118 1_3:+58020291 Msa0128350:CDS
GGCTTCTCAATGTTTGGTGT+TGG 0.398080 1_3:-58008514 None:intergenic
GGCTTCTCAACCTTTGGAGT+TGG 0.398580 1_3:-58019559 None:intergenic
GGTTTCCCATTCTTTAGGGT+TGG 0.398639 1_3:-58008805 None:intergenic
GTTTGATTTGTAAACTGCTT+CGG 0.404316 1_3:-58009046 None:intergenic
GAGGTGTTTGTAATATGTTT+CGG 0.407116 1_3:-58019485 None:intergenic
AACATCATTGTCTGGGTTTG+TGG 0.410786 1_3:-58008965 None:intergenic
AGTTTGGATTTCTCAACCTC+TGG 0.412283 1_3:-58019358 None:intergenic
GGAACTTTACATGTCTCTAA+TGG 0.414014 1_3:-58020725 None:intergenic
AAGAATAAAGGTGGTGAAGA+TGG 0.414985 1_3:-58008449 None:intergenic
GATTTCTCAACCTCTGGAGT+TGG 0.415316 1_3:-58019352 None:intergenic
GTTTGATGAGTAAACTTCTT+CGG 0.415435 1_3:-58019587 None:intergenic
TGTGTAAACAGCTTCGGACT+TGG 0.416511 1_3:-58019686 None:intergenic
TCTAATTATTATCCAATTCA+AGG 0.416895 1_3:+58020336 Msa0128350:CDS
CCAAATCCAAAACTGATTAT+GGG 0.417568 1_3:+58019950 Msa0128350:CDS
CATGGCTGAATACTGATATA+GGG 0.420199 1_3:-58009541 None:intergenic
ATAACCATTAGGAACTGGTT+TGG 0.422058 1_3:-58020855 None:intergenic
CAAGCTAAACCAATCCATAA+TGG 0.423035 1_3:+58009788 Msa0128350:CDS
TATGAGACAGGTCCTATAAC+AGG 0.429310 1_3:+58020593 Msa0128350:CDS
GTTTAATAACCATTAGGAAC+TGG 0.429812 1_3:-58020860 None:intergenic
CTAAACCTGAAACAAATTAT+GGG 0.431653 1_3:+58008671 Msa0128350:CDS
GCTTGAGAAGTGTAGAAGAA+AGG 0.434737 1_3:-58009770 None:intergenic
GATTTGGGAACTTTATAGTC+AGG 0.446675 1_3:-58019934 None:intergenic
TCAAATTATTACCCAATTCA+AGG 0.448206 1_3:+58009276 Msa0128350:CDS
TATAGTCCAACCCTAAAGAA+TGG 0.448647 1_3:+58008799 Msa0128350:CDS
TCCGCAACTGATTATGTGTA+TGG 0.452263 1_3:+58019217 Msa0128350:CDS
TTCTAAGAACCATTATGGAT+TGG 0.457546 1_3:-58009797 None:intergenic
AAAGATTGAGAAACCTATAT+CGG 0.457571 1_3:+58008708 Msa0128350:CDS
GATTTCTCGATCTTTGGAGT+TGG 0.461441 1_3:-58009123 None:intergenic
GGGTTCTCAATCTTTAGGGT+TGG 0.461468 1_3:-58009018 None:intergenic
GTGTAAACTGCTTCAGACTT+TGG 0.463749 1_3:-58020105 None:intergenic
GTGTAAATTGCTTCGGACTT+TGG 0.466310 1_3:-58019790 None:intergenic
GTGTAAACTACTTCGGACTT+AGG 0.468531 1_3:-58008934 None:intergenic
ATAATCAGTTGCGGAGGCTA+TGG 0.472736 1_3:-58019209 None:intergenic
GGTTTCTCAATCTTTGGTGA+TGG 0.473098 1_3:-58008700 None:intergenic
GGTTTCTCAATCTTGGGAGC+CGG 0.476195 1_3:-58019664 None:intergenic
GTTTGGTGTGTAAACAGCTT+CGG 0.477233 1_3:-58019692 None:intergenic
TGTGTAGACTGCTTCAGACT+TGG 0.477861 1_3:-58020001 None:intergenic
CAAGCCAAACCAGTTCCTAA+TGG 0.482016 1_3:+58020851 Msa0128350:CDS
GTTTGGTGTGTAAATTGCTT+CGG 0.485922 1_3:-58019797 None:intergenic
ATAGTCCAACCCTAAAGAAT+GGG 0.492193 1_3:+58008800 Msa0128350:CDS
ATTTACAGAAAACTACTCCT+TGG 0.492823 1_3:-58009248 None:intergenic
GTGTAAACAGCTTCGGACTT+GGG 0.496746 1_3:-58019685 None:intergenic
GAGTAAACTTCTTCGGACTT+AGG 0.505884 1_3:-58019580 None:intergenic
CCTGAAACAAATTATGGGTA+TGG 0.506733 1_3:+58008676 Msa0128350:CDS
AGGTGCAATAGAGTACAATC+TGG 0.512544 1_3:-58020813 None:intergenic
ACTTTGGTTTCTCAATCTTG+GGG 0.512628 1_3:-58019774 None:intergenic
GTGTAAACTACTTCAGACTT+TGG 0.515414 1_3:-58019895 None:intergenic
ACTTTGGTTTCTCGATCTTG+GGG 0.515715 1_3:-58019879 None:intergenic
ACTTTGGTTTCTCGATCTTG+GGG 0.515715 1_3:-58020089 None:intergenic
AATCCCATGGTTCACATTGG+TGG 0.517051 1_3:-58009684 None:intergenic
CCCCAACCTAAAATAGACTA+CGG 0.519581 1_3:+58019529 Msa0128350:CDS
GCTTGCGAGGTGTAGAAGAA+AGG 0.521342 1_3:-58020833 None:intergenic
CCTACATCCATTGGCGTCCA+AGG 0.524679 1_3:+58009231 Msa0128350:CDS
CCTTGAACACTAATGATTGT+GGG 0.526216 1_3:-58020291 None:intergenic
ACACTGTCACATTCAAAGCT+TGG 0.526303 1_3:+58009593 Msa0128350:CDS
AATGTGAACCATGGGATTAG+TGG 0.528206 1_3:+58009689 Msa0128350:CDS
AACTTCATAATATGAGTTTG+TGG 0.529671 1_3:-58008857 None:intergenic
GTTTGGGAACATCATTGTCT+GGG 0.532752 1_3:-58008972 None:intergenic
TCCTTGAACACTAATGATTG+TGG 0.534039 1_3:-58020292 None:intergenic
TGTAGATGTGTGAATGAGCT+TGG 0.536226 1_3:+58009506 Msa0128350:CDS
TGTGAATGTGTGAATGAGCT+TGG 0.538836 1_3:+58020569 Msa0128350:CDS
AACCTTTACCATCTGTTGCA+TGG 0.539757 1_3:-58009559 None:intergenic
ATTTGGTGTGTAAACTACTT+CGG 0.541337 1_3:-58008941 None:intergenic
TGTAAACTGCTTCGGACTTG+GGG 0.542366 1_3:-58009038 None:intergenic
TCTCTAATGGAGAACTCTCT+AGG 0.548355 1_3:-58020712 None:intergenic
ATCCCATGGTTCACATTGGT+GGG 0.549973 1_3:-58009683 None:intergenic
TTCTTATCTACTTCAGTTTG+GGG 0.552438 1_3:-58019268 None:intergenic
GTTTGTTGTGTAAACTGCAT+CGG 0.553526 1_3:-58008833 None:intergenic
AGGAGACGGTACGAAGAAAG+AGG 0.555521 1_3:-58020779 None:intergenic
GTGCAAATTCCTACATCCAT+TGG 0.558406 1_3:+58009222 Msa0128350:CDS
AGGAACTGGTTTGGCTTGCG+AGG 0.559011 1_3:-58020846 None:intergenic
CCTTGGACGCCAATGGATGT+AGG 0.560421 1_3:-58009231 None:intergenic
TTCACATGTAACTCGTGCTA+CGG 0.561259 1_3:-58020552 None:intergenic
TTCCCACCAATGTGAACCAT+GGG 0.563104 1_3:+58009681 Msa0128350:CDS
CGAGAAATCCAAACTTGAAG+CGG 0.563995 1_3:+58009137 Msa0128350:CDS
AACTACTCCTTGGACGCCAA+TGG 0.565037 1_3:-58009238 None:intergenic
TATTTAATGGAGAACTCTCT+AGG 0.566881 1_3:-58009649 None:intergenic
AATCATTAGTGTTCAAGGAG+TGG 0.567276 1_3:+58020296 Msa0128350:CDS
AGATTACGATAAGAAGAAAG+AGG 0.567545 1_3:-58009716 None:intergenic
ATTTATAGTCCGACTTTGTG+AGG 0.572239 1_3:-58009068 None:intergenic
TGAGAAGTGTAGAAGAAAGG+TGG 0.572825 1_3:-58009767 None:intergenic
GAGGAGCACCACTGATGCCA+TGG 0.576264 1_3:-58020760 None:intergenic
CTTCATAGTCTGGTTTGGTG+AGG 0.576955 1_3:-58019504 None:intergenic
CCCAACCTAAAATAGACTAC+GGG 0.578260 1_3:+58019530 Msa0128350:CDS
ATGCCATGGTTCACATCGGT+GGG 0.585493 1_3:-58020746 None:intergenic
CTTTGGTTTCTCGATCTTGG+GGG 0.585548 1_3:-58019878 None:intergenic
CTTTGGTTTCTCGATCTTGG+GGG 0.585548 1_3:-58020088 None:intergenic
AATGAGCTTGGATATGAGAC+AGG 0.588969 1_3:+58020581 Msa0128350:CDS
AGACATGTAACAGATAGTAA+AGG 0.593269 1_3:+58020620 Msa0128350:CDS
GTATTCAGCCATGCAACAGA+TGG 0.594298 1_3:+58009551 Msa0128350:CDS
CGGGTATAGTCCAACTCCAA+AGG 0.611610 1_3:+58019549 Msa0128350:CDS
GTTCCCACCAATGTGAACCA+TGG 0.614485 1_3:+58009680 Msa0128350:CDS
CTTTGGTTTCTCAATCTTGG+GGG 0.618265 1_3:-58019773 None:intergenic
CAAATCAAACCTCACAAAGT+CGG 0.620038 1_3:+58009059 Msa0128350:CDS
AATAGATTATGGCTATGCAC+CGG 0.625707 1_3:+58019645 Msa0128350:CDS
GATGCCATGGTTCACATCGG+TGG 0.630598 1_3:-58020747 None:intergenic
ACTAATCCCATGGTTCACAT+TGG 0.637614 1_3:-58009687 None:intergenic
GAGGAGCACCACTAATCCCA+TGG 0.639178 1_3:-58009697 None:intergenic
GTTCCCACCGATGTGAACCA+TGG 0.654623 1_3:+58020743 Msa0128350:CDS
ACCATACACATAATCAGTTG+CGG 0.654626 1_3:-58019218 None:intergenic
TGAGTATAGTCCAACTCCAG+AGG 0.667102 1_3:+58019342 Msa0128350:CDS
GATGTGAACCATGGCATCAG+TGG 0.673868 1_3:+58020752 Msa0128350:CDS
TGGACCATAATCAGTTGCAG+AGG 0.677383 1_3:-58008494 None:intergenic
ACTGATGCCATGGTTCACAT+CGG 0.694443 1_3:-58020750 None:intergenic
ATACACATAATCAGTTGCGG+AGG 0.697746 1_3:-58019215 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTAATAAAAAAA+AGG - chr1_3:58010364-58010383 None:intergenic 0.0%
!! TCAAACTAATATAAATTAAT+TGG - chr1_3:58009409-58009428 None:intergenic 10.0%
!! TTGATATATAAATAAAATCA+AGG + chr1_3:58009937-58009956 Msa0128350:intron 10.0%
!! AATTAATTAAAGTTTAATCA+AGG - chr1_3:58010081-58010100 None:intergenic 10.0%
!!! AATAATTTTATGTTTAATCA+AGG - chr1_3:58010114-58010133 None:intergenic 10.0%
!! AATAAAATGCAATATATAAT+AGG + chr1_3:58010974-58010993 Msa0128350:intron 10.0%
!!! AAAAAAAAGTATAAAATAGA+AGG + chr1_3:58011154-58011173 Msa0128350:intron 10.0%
!!! AAAATTTTAAATTACAAAAC+AGG + chr1_3:58011548-58011567 Msa0128350:intron 10.0%
!!! TAGGAAAATATTTTTTTAAA+AGG + chr1_3:58011881-58011900 Msa0128350:intron 10.0%
!!! TTTTTTTTTTTATAGTTAAC+GGG - chr1_3:58011975-58011994 None:intergenic 10.0%
!!! GTTTTTTTTTTTATAGTTAA+CGG - chr1_3:58011976-58011995 None:intergenic 10.0%
!! TATATAAATAATTATTCTTC+TGG - chr1_3:58012181-58012200 None:intergenic 10.0%
!!! CATTTTTTATTTTGTTTTAT+GGG - chr1_3:58013098-58013117 None:intergenic 10.0%
!!! TCATTTTTTATTTTGTTTTA+TGG - chr1_3:58013099-58013118 None:intergenic 10.0%
!!! TTTGTTAATTTTGTTAATAA+AGG + chr1_3:58014083-58014102 Msa0128350:intron 10.0%
!!! TTTTATAGATAAATAGATTA+GGG + chr1_3:58014465-58014484 Msa0128350:intron 10.0%
!! AAAAAATAATAATAAGGATT+CGG + chr1_3:58014661-58014680 Msa0128350:intron 10.0%
!! TAGGAATTAAAAAAAAAATA+AGG + chr1_3:58014721-58014740 Msa0128350:intron 10.0%
!! GAATTCAAAAAAAAATAATA+AGG + chr1_3:58014789-58014808 Msa0128350:intron 10.0%
!! AAAAAAAAATAATAAGGATT+CGG + chr1_3:58014795-58014814 Msa0128350:intron 10.0%
!! AAAAAATAATAATAAGGATT+CGG + chr1_3:58014661-58014680 Msa0128350:intron 10.0%
!! TAGGAATTAAAAAAAAAATA+AGG + chr1_3:58014721-58014740 Msa0128350:intron 10.0%
!! GAATTCAAAAAAAAATAATA+AGG + chr1_3:58014789-58014808 Msa0128350:intron 10.0%
!! AAAAAAAAATAATAAGGATT+CGG + chr1_3:58014795-58014814 Msa0128350:intron 10.0%
!!! AATATTTTCTTCAAAAAAAA+AGG + chr1_3:58011245-58011264 Msa0128350:intron 10.0%
!!! TTCTATTTTATACTTTTTTT+CGG - chr1_3:58011155-58011174 None:intergenic 10.0%
!!! AATATTTTCTTCAAAAAAAA+AGG + chr1_3:58011245-58011264 Msa0128350:intron 10.0%
!! TTAATATATAAGGAAAAATT+AGG + chr1_3:58016084-58016103 Msa0128350:intron 10.0%
!! CATAACAAAATTAATAAATA+AGG + chr1_3:58016122-58016141 Msa0128350:intron 10.0%
!!! TATTTTCTTCAAAAAAAAAA+AGG + chr1_3:58016159-58016178 Msa0128350:intron 10.0%
!! AGTAACAAAATTAATAAATA+AGG + chr1_3:58016303-58016322 Msa0128350:intron 10.0%
!! AAATAAGAATGTAAAAAAAA+AGG + chr1_3:58016462-58016481 Msa0128350:intron 10.0%
!!! GGATTTTTTTTAAATTTTTT+TGG - chr1_3:58016536-58016555 None:intergenic 10.0%
!!! AAAAAAAAGTATAAAATAGA+AGG + chr1_3:58011154-58011173 Msa0128350:intron 10.0%
!! ATTTAATCCAATAATTATTT+AGG + chr1_3:58018624-58018643 Msa0128350:intron 10.0%
!!! TCGCTTTTTTTTTTTTTTTT+GGG + chr1_3:58010017-58010036 Msa0128350:intron 15.0%
!! TAGATCAACAATTAATTAAA+AGG - chr1_3:58010057-58010076 None:intergenic 15.0%
!!! TGAATTTTAACATGTTTTTA+AGG + chr1_3:58010437-58010456 Msa0128350:intron 15.0%
!!! CTATTTTATACTTTTTTTTC+CGG - chr1_3:58011153-58011172 None:intergenic 15.0%
!! CATTGAATAAATAATGAATT+TGG + chr1_3:58011737-58011756 Msa0128350:intron 15.0%
!!! ACTAAAATTTGAAGTAAAAT+TGG + chr1_3:58012016-58012035 Msa0128350:intron 15.0%
!! ATTGTTTAATGGTAAAAAAT+GGG - chr1_3:58012251-58012270 None:intergenic 15.0%
!! TATTGTTTAATGGTAAAAAA+TGG - chr1_3:58012252-58012271 None:intergenic 15.0%
!! TTGATCATAAAGATAAAATA+GGG - chr1_3:58012570-58012589 None:intergenic 15.0%
!! TTTGATCATAAAGATAAAAT+AGG - chr1_3:58012571-58012590 None:intergenic 15.0%
!!! AACAGTTTAATAATCTTTTT+GGG - chr1_3:58013065-58013084 None:intergenic 15.0%
!!! AAACAGTTTAATAATCTTTT+TGG - chr1_3:58013066-58013085 None:intergenic 15.0%
!!! AAATTTTCTTGCATTAATTT+CGG - chr1_3:58014065-58014084 None:intergenic 15.0%
!!! TTAATTTTGTTAATAAAGGT+TGG + chr1_3:58014087-58014106 Msa0128350:intron 15.0%
!!! GTTAATAATATTTTGTTAGT+AGG + chr1_3:58014232-58014251 Msa0128350:intron 15.0%
!!! CTTTTATAGATAAATAGATT+AGG + chr1_3:58014464-58014483 Msa0128350:intron 15.0%
!! TATTTGCTTCATAAAAAAAA+AGG + chr1_3:58014495-58014514 Msa0128350:intron 15.0%
!!! CAAATATTTTATACACTTTT+AGG - chr1_3:58014592-58014611 None:intergenic 15.0%
!! TAAGATAAGATAAATAGATT+AGG + chr1_3:58015000-58015019 Msa0128350:intron 15.0%
!! AAGATAAGATAAATAGATTA+GGG + chr1_3:58015001-58015020 Msa0128350:intron 15.0%
!! TATTTGCTTCATAAAAAAAA+AGG + chr1_3:58014495-58014514 Msa0128350:intron 15.0%
!! TATTTGCTTAAAAAAAAAGA+AGG + chr1_3:58015142-58015161 Msa0128350:intron 15.0%
!! CGAAACAAAATTAATTAATA+AGG + chr1_3:58015559-58015578 Msa0128350:intron 15.0%
!! CGTAACAAAATTAATAAATA+AGG + chr1_3:58015739-58015758 Msa0128350:intron 15.0%
!! GATTATTATAAAAGAGAATT+CGG + chr1_3:58015761-58015780 Msa0128350:intron 15.0%
!!! GAAAAAAAGTATAAAATAGA+AGG + chr1_3:58015842-58015861 Msa0128350:intron 15.0%
!!! TTTTTTATATGGAATTTGTT+AGG + chr1_3:58015988-58016007 Msa0128350:intron 15.0%
!! CGTAACAAAATTAATATATA+AGG + chr1_3:58016074-58016093 Msa0128350:intron 15.0%
!! AAATTAATAAATAAGGTAAG+CGG + chr1_3:58016310-58016329 Msa0128350:intron 15.0%
!!! AATTTTACACTCTTTTTTTT+CGG - chr1_3:58016508-58016527 None:intergenic 15.0%
!!! GAATTTTACACTTTTTTTTT+TGG - chr1_3:58016557-58016576 None:intergenic 15.0%
!!! ATATTTTCTTCAACAAAAAA+AGG + chr1_3:58016635-58016654 Msa0128350:intron 15.0%
!! CGTAACAAAATTAATAAATA+AGG + chr1_3:58015739-58015758 Msa0128350:intron 15.0%
!!! ATTGGTTTAATTAAGATAAT+AGG + chr1_3:58016902-58016921 Msa0128350:intron 15.0%
!! AGAAATTATATGAGTTAAAA+AGG - chr1_3:58017042-58017061 None:intergenic 15.0%
!! TCAGTTATCTTAAAAAAATT+TGG + chr1_3:58017258-58017277 Msa0128350:intron 15.0%
!! AAAATTATTATTAATAGCAG+TGG + chr1_3:58017288-58017307 Msa0128350:intron 15.0%
!!! ACATATTTTAAATCTTATGT+GGG - chr1_3:58017332-58017351 None:intergenic 15.0%
!!! AAAATTATATTTGGTGAAAT+TGG - chr1_3:58017530-58017549 None:intergenic 15.0%
!! GAAAACAGTAATTAAAATTA+GGG - chr1_3:58017714-58017733 None:intergenic 15.0%
!! AGAAAACAGTAATTAAAATT+AGG - chr1_3:58017715-58017734 None:intergenic 15.0%
!!! TAAATAAAGCAATTTTGTAT+TGG + chr1_3:58018184-58018203 Msa0128350:intron 15.0%
!! AAAAAAATAATGAGTTTGAT+CGG - chr1_3:58018370-58018389 None:intergenic 15.0%
!! TAATACTAATTATAAGATGT+AGG - chr1_3:58018689-58018708 None:intergenic 15.0%
!! ATAATTAGTATTACTATTGT+AGG + chr1_3:58018696-58018715 Msa0128350:intron 15.0%
!! TCATATCTATAATTTACTTT+GGG - chr1_3:58019436-58019455 None:intergenic 15.0%
!! ATCATATCTATAATTTACTT+TGG - chr1_3:58019437-58019456 None:intergenic 15.0%
!!! GAATAATCATAATTTGATTT+GGG - chr1_3:58020162-58020181 None:intergenic 15.0%
!! CAATGAAAAAAGAAGAATAA+AGG - chr1_3:58008464-58008483 None:intergenic 20.0%
!! AAACCAAACTATGATAAATA+TGG + chr1_3:58008571-58008590 Msa0128350:CDS 20.0%
!! ATACCATATTTATCATAGTT+TGG - chr1_3:58008577-58008596 None:intergenic 20.0%
!! AAACTATGATAAATATGGTA+TGG + chr1_3:58008576-58008595 Msa0128350:intron 20.0%
!!! AGTTCAAATTTCTCTATTTT+TGG - chr1_3:58008604-58008623 None:intergenic 20.0%
!!! ACATATCCATAATCATTTTT+GGG - chr1_3:58008889-58008908 None:intergenic 20.0%
!!! AACATATCCATAATCATTTT+TGG - chr1_3:58008890-58008909 None:intergenic 20.0%
!! CCAAAACCTAAAAAAAATTA+CGG + chr1_3:58009093-58009112 Msa0128350:CDS 20.0%
!! CAAAACCTAAAAAAAATTAC+GGG + chr1_3:58009094-58009113 Msa0128350:CDS 20.0%
!! ATGAAAATTTACCTTGAATT+GGG - chr1_3:58009290-58009309 None:intergenic 20.0%
!! AATGAAAATTTACCTTGAAT+TGG - chr1_3:58009291-58009310 None:intergenic 20.0%
!! GGAACTTTACAAATATTTAA+TGG - chr1_3:58009665-58009684 None:intergenic 20.0%
!! CAAAAAAAAAAAAAAAAGCG+AGG - chr1_3:58010018-58010037 None:intergenic 20.0%
!!! CTCGCTTTTTTTTTTTTTTT+TGG + chr1_3:58010016-58010035 Msa0128350:intron 20.0%
!! TTATAAAGAATGCATAACAA+TGG + chr1_3:58010338-58010357 Msa0128350:intron 20.0%
!!! TGAACCATATTATTTTAATC+CGG - chr1_3:58010703-58010722 None:intergenic 20.0%
!! TAAAATAATATGGTTCAATC+CGG + chr1_3:58010706-58010725 Msa0128350:intron 20.0%
!! CGACATAAAATAATTTAACA+TGG - chr1_3:58010829-58010848 None:intergenic 20.0%
!! ATGCAATATATAATAGGTAA+CGG + chr1_3:58010980-58010999 Msa0128350:intron 20.0%
!! TATATACCTGAATTATTGAT+AGG - chr1_3:58011101-58011120 None:intergenic 20.0%
!!! TTTTTTAGATGGAATTTGTT+AGG + chr1_3:58011300-58011319 Msa0128350:intron 20.0%
!! TATATATGTTTACATTGTTG+CGG - chr1_3:58011438-58011457 None:intergenic 20.0%
!!! GAATTGAAAATTGATTTCAT+CGG + chr1_3:58011495-58011514 Msa0128350:intron 20.0%
!!! CTAAAAGTAAATAGATGTTT+TGG - chr1_3:58011658-58011677 None:intergenic 20.0%
!! CATTCAATACTTAATGTATT+TGG - chr1_3:58011775-58011794 None:intergenic 20.0%
!!! GAATCTAAAAAGTGATTTTT+TGG + chr1_3:58011794-58011813 Msa0128350:intron 20.0%
!! GTTAATATCAGTAAAATATG+TGG - chr1_3:58011998-58012017 None:intergenic 20.0%
!! TGGAAAATTCTATTGTTTAA+TGG - chr1_3:58012262-58012281 None:intergenic 20.0%
!!! TAAAGTTGTTTCTTTTTTAC+TGG - chr1_3:58012481-58012500 None:intergenic 20.0%
!! AGATTCATATATTTCAAATG+AGG + chr1_3:58012675-58012694 Msa0128350:intron 20.0%
!!! TGCTATTACATATAGTTTTT+TGG + chr1_3:58012703-58012722 Msa0128350:intron 20.0%
!! ACTAAAACTAATATGCAAAA+TGG + chr1_3:58012824-58012843 Msa0128350:intron 20.0%
!!! ATAATTTTATATAGTTCGGA+TGG + chr1_3:58012935-58012954 Msa0128350:intron 20.0%
!!! TCATTGTTGAAGAATTTTTT+TGG + chr1_3:58013031-58013050 Msa0128350:intron 20.0%
!!! ACAGTTTAATAATCTTTTTG+GGG - chr1_3:58013064-58013083 None:intergenic 20.0%
!!! ATTGTTTTCTTAATTTGCTT+TGG - chr1_3:58013284-58013303 None:intergenic 20.0%
!! CATGTTTCATTGAATATATT+TGG - chr1_3:58013795-58013814 None:intergenic 20.0%
!! ATCTGTATTGTCAAAAAAAT+AGG + chr1_3:58014114-58014133 Msa0128350:intron 20.0%
!! TTTATGTTTATCTGTTTAGT+AGG + chr1_3:58014292-58014311 Msa0128350:intron 20.0%
!!! TTAGAGCTAAAATAAGTTTT+CGG + chr1_3:58014436-58014455 Msa0128350:intron 20.0%
!! TATTTGCTTAAAAAAAGAGA+TGG + chr1_3:58014606-58014625 Msa0128350:intron 20.0%
!! AATAAGGATTCGAAAAAAAA+AGG + chr1_3:58014737-58014756 Msa0128350:intron 20.0%
!!! TATCAAGTTTGCTATAATTT+TGG - chr1_3:58014825-58014844 None:intergenic 20.0%
!!! CAAATATTTTCTACACTTTT+AGG - chr1_3:58015128-58015147 None:intergenic 20.0%
!! AGGATAGGAATAAAAAAAAA+AGG + chr1_3:58014760-58014779 Msa0128350:intron 20.0%
!! ATAGGAATAAAAAAAAAAGG+AGG + chr1_3:58015165-58015184 Msa0128350:intron 20.0%
!! AATAAAAAAAAAAGGAGGAT+AGG + chr1_3:58015170-58015189 Msa0128350:intron 20.0%
!! AATAAGGATTCGAAAATAAA+AGG + chr1_3:58015275-58015294 Msa0128350:intron 20.0%
!!! TATCAAGTTTGCTATAATTT+TGG - chr1_3:58014825-58014844 None:intergenic 20.0%
!!! TTTTTTAGATGGAATTTGTT+AGG + chr1_3:58011300-58011319 Msa0128350:intron 20.0%
!! TATAAACCTGATTTATTGAT+AGG - chr1_3:58015791-58015810 None:intergenic 20.0%
!! TTTATATAACCAAGTTTACA+TGG + chr1_3:58015805-58015824 Msa0128350:intron 20.0%
!!! TTTTTTAGATGGAATTTGTT+AGG + chr1_3:58011300-58011319 Msa0128350:intron 20.0%
!!! TTTTTTAGATGGAATTTGTT+AGG + chr1_3:58011300-58011319 Msa0128350:intron 20.0%
!!! ATTTTCGAAAATGTTTGTTA+TGG + chr1_3:58016804-58016823 Msa0128350:intron 20.0%
!!! GACATATTTTAAATCTTATG+TGG - chr1_3:58017333-58017352 None:intergenic 20.0%
!! AAAAAAAACAAATCTCAAGA+AGG + chr1_3:58017489-58017508 Msa0128350:intron 20.0%
!!! CATTAGTCTATATTTAATTG+TGG - chr1_3:58017796-58017815 None:intergenic 20.0%
!! ATTCCTAATTTATACAAAAG+TGG - chr1_3:58018034-58018053 None:intergenic 20.0%
!!! AGTTTATTCTTTTGTGAAAA+GGG + chr1_3:58018121-58018140 Msa0128350:intron 20.0%
!! ATAGAAATACACATATCAAA+AGG - chr1_3:58018249-58018268 None:intergenic 20.0%
!!! AACATTAACCTATTTCTATT+AGG + chr1_3:58018306-58018325 Msa0128350:intron 20.0%
!!! TCCAAACAATTGTTTTTTTA+TGG + chr1_3:58018494-58018513 Msa0128350:intron 20.0%
!! TCCATAAAAAAACAATTGTT+TGG - chr1_3:58018498-58018517 None:intergenic 20.0%
!!! CTTCTTTTTGCTATTAATAT+TGG - chr1_3:58018601-58018620 None:intergenic 20.0%
!!! TAAAGTTCTAGGTAAATATA+AGG - chr1_3:58018940-58018959 None:intergenic 20.0%
!! CTTATGAATAATAAAGTTCT+AGG - chr1_3:58018951-58018970 None:intergenic 20.0%
!!! ATTATGGAGTATTGAATAAT+TGG - chr1_3:58019005-58019024 None:intergenic 20.0%
!! TACAAGAAACTAATTTATGA+TGG + chr1_3:58019135-58019154 Msa0128350:intron 20.0%
!!! ACTATACTCATAATTTGTTT+TGG - chr1_3:58019332-58019351 None:intergenic 20.0%
!!! TCATAATTTGGTTTAGATTT+GGG - chr1_3:58019742-58019761 None:intergenic 20.0%
!!! TTCATAATTTGGTTTAGATT+TGG - chr1_3:58019743-58019762 None:intergenic 20.0%
!! GGAATAATCATAATTTGATT+TGG - chr1_3:58020163-58020182 None:intergenic 20.0%
!! TTATAATCTGTATCAAGTTT+GGG - chr1_3:58020207-58020226 None:intergenic 20.0%
!! TTTATAATCTGTATCAAGTT+TGG - chr1_3:58020208-58020227 None:intergenic 20.0%
!! TCTAATTATTATCCAATTCA+AGG + chr1_3:58020336-58020355 Msa0128350:CDS 20.0%
!!! GTAAAAAAAGTATTATAGCT+AGG - chr1_3:58020414-58020433 None:intergenic 20.0%
! TGAAAAAAGAAGAATAAAGG+TGG - chr1_3:58008461-58008480 None:intergenic 25.0%
!! TTGTTATCTACTTCAGTTTT+AGG - chr1_3:58008538-58008557 None:intergenic 25.0%
!!! TAGTTTGGTTTTGTAGAATA+TGG - chr1_3:58008562-58008581 None:intergenic 25.0%
!!! TGAATTTTTGAGATGTTGAT+TGG - chr1_3:58008638-58008657 None:intergenic 25.0%
! CTAAACCTGAAACAAATTAT+GGG + chr1_3:58008671-58008690 Msa0128350:CDS 25.0%
! AAAGATTGAGAAACCTATAT+CGG + chr1_3:58008708-58008727 Msa0128350:CDS 25.0%
!! CTATAAGCAAAATGAGTTTT+GGG - chr1_3:58008784-58008803 None:intergenic 25.0%
!! ACTATAAGCAAAATGAGTTT+TGG - chr1_3:58008785-58008804 None:intergenic 25.0%
! AACTTCATAATATGAGTTTG+TGG - chr1_3:58008860-58008879 None:intergenic 25.0%
!!! TAGGTTTCTCAATTTTTTCT+GGG - chr1_3:58008918-58008937 None:intergenic 25.0%
!!! TTAGGTTTCTCAATTTTTTC+TGG - chr1_3:58008919-58008938 None:intergenic 25.0%
!!! CCATAATTTGTTTTACGTTT+GGG - chr1_3:58008991-58009010 None:intergenic 25.0%
!!! TCCATAATTTGTTTTACGTT+TGG - chr1_3:58008992-58009011 None:intergenic 25.0%
! CGTAAAACAAATTATGGATA+TGG + chr1_3:58008994-58009013 Msa0128350:CDS 25.0%
!!! CCGTAATTTTTTTTAGGTTT+TGG - chr1_3:58009096-58009115 None:intergenic 25.0%
!!! ACTTCATAATCTTGTTTTGT+GGG - chr1_3:58009177-58009196 None:intergenic 25.0%
!!! AACTTCATAATCTTGTTTTG+TGG - chr1_3:58009178-58009197 None:intergenic 25.0%
! TCAAATTATTACCCAATTCA+AGG + chr1_3:58009276-58009295 Msa0128350:CDS 25.0%
! GTGGAATAAAATTCTATGTA+TGG + chr1_3:58009845-58009864 Msa0128350:intron 25.0%
! TTCAAAACTCTACACTTTAT+TGG + chr1_3:58010175-58010194 Msa0128350:intron 25.0%
! TCGATATCAGTCATATATAT+CGG + chr1_3:58010238-58010257 Msa0128350:intron 25.0%
! ATATTAAGACAGAATATGAG+GGG - chr1_3:58010653-58010672 None:intergenic 25.0%
! CATATTAAGACAGAATATGA+GGG - chr1_3:58010654-58010673 None:intergenic 25.0%
! ACATATTAAGACAGAATATG+AGG - chr1_3:58010655-58010674 None:intergenic 25.0%
!!! TTTTAAGACGATTTTTCAAC+CGG + chr1_3:58010681-58010700 Msa0128350:intron 25.0%
! TCAACCGGATTAAAATAATA+TGG + chr1_3:58010696-58010715 Msa0128350:intron 25.0%
! TATTTATCTCAATTCTCAAC+CGG - chr1_3:58010728-58010747 None:intergenic 25.0%
! TATTATATCTCAATTCTCTC+TGG - chr1_3:58010866-58010885 None:intergenic 25.0%
! GAATTGAGATATAATACCAA+AGG + chr1_3:58010870-58010889 Msa0128350:intron 25.0%
!! AAAAAGTATACTTTAGCCTT+TGG - chr1_3:58010889-58010908 None:intergenic 25.0%
!!! GTGTTTTATTTTGTCTACTA+TGG - chr1_3:58011028-58011047 None:intergenic 25.0%
! TATATATAACCAAGTTTCCA+TGG + chr1_3:58011115-58011134 Msa0128350:intron 25.0%
! TTCTTCAAAAAAAAAGCAAG+AGG + chr1_3:58011251-58011270 Msa0128350:intron 25.0%
!! TTATTCGTTTAACTTCTTCT+TGG - chr1_3:58011414-58011433 None:intergenic 25.0%
!! AAAATTGATTTCATCGGTTA+TGG + chr1_3:58011501-58011520 Msa0128350:intron 25.0%
!!! TAAGCAAAAATGCACTTTTT+AGG + chr1_3:58011712-58011731 Msa0128350:intron 25.0%
!!! TTTTTGGTTATAAATGTGAC+CGG + chr1_3:58011810-58011829 Msa0128350:intron 25.0%
!!! GCTTTTTGATAACAAAAGTT+AGG + chr1_3:58011862-58011881 Msa0128350:intron 25.0%
!!! TCCTTTTTTCAGTTTACAAT+AGG + chr1_3:58012044-58012063 Msa0128350:intron 25.0%
! TCCTATTGTAAACTGAAAAA+AGG - chr1_3:58012048-58012067 None:intergenic 25.0%
! CCTATAAATGGTTGTTTAAA+GGG - chr1_3:58012072-58012091 None:intergenic 25.0%
! ACCTATAAATGGTTGTTTAA+AGG - chr1_3:58012073-58012092 None:intergenic 25.0%
! TTTAAACAACCATTTATAGG+TGG + chr1_3:58012072-58012091 Msa0128350:intron 25.0%
!! TTATTGTTGAGATTCTGAAA+TGG - chr1_3:58012282-58012301 None:intergenic 25.0%
! GAATCTCAACAATAATAATG+TGG + chr1_3:58012287-58012306 Msa0128350:intron 25.0%
!!! GGCTTAAACTTTCTATTTTT+TGG + chr1_3:58012313-58012332 Msa0128350:intron 25.0%
! TTCAGAAAGAGAAAAGAAAT+AGG - chr1_3:58012384-58012403 None:intergenic 25.0%
!! AAAGCTTAAGTGTGTTTTAT+TGG - chr1_3:58012635-58012654 None:intergenic 25.0%
!!! ACATTTTTTCCCCAATATAA+TGG - chr1_3:58012739-58012758 None:intergenic 25.0%
! TACAAAGAACTTAGATATCA+AGG + chr1_3:58012768-58012787 Msa0128350:intron 25.0%
! TTCTTCAACAATGATTGATA+AGG - chr1_3:58013025-58013044 None:intergenic 25.0%
!! TCAACTTACATAATTTGTAG+AGG + chr1_3:58013133-58013152 Msa0128350:intron 25.0%
! TTTCTTAATGTGTATCTGAA+TGG - chr1_3:58013340-58013359 None:intergenic 25.0%
! TCAGATACACATTAAGAAAA+AGG + chr1_3:58013341-58013360 Msa0128350:intron 25.0%
!! CGTTATTCTCTTTTTATGTA+GGG - chr1_3:58013580-58013599 None:intergenic 25.0%
!! TCGTTATTCTCTTTTTATGT+AGG - chr1_3:58013581-58013600 None:intergenic 25.0%
! AATTACGACTTCAATACAAA+AGG - chr1_3:58013692-58013711 None:intergenic 25.0%
! TGATTAGAACAGAAATTGTA+TGG + chr1_3:58013822-58013841 Msa0128350:intron 25.0%
! GACAAAATGAATTTGAATCA+TGG + chr1_3:58013909-58013928 Msa0128350:intron 25.0%
! GATCCATTAAACATTTAATG+TGG - chr1_3:58014020-58014039 None:intergenic 25.0%
!! TTAAATGTTTAATGGATCAG+TGG + chr1_3:58014022-58014041 Msa0128350:intron 25.0%
!! TAAATGTTTAATGGATCAGT+GGG + chr1_3:58014023-58014042 Msa0128350:intron 25.0%
! TATTGTCAAAAAAATAGGAG+TGG + chr1_3:58014119-58014138 Msa0128350:intron 25.0%
!! TAATATTTTGTTAGTAGGAG+TGG + chr1_3:58014237-58014256 Msa0128350:intron 25.0%
!!! GATAGGAACAATTTGTTAAT+AGG + chr1_3:58014259-58014278 Msa0128350:intron 25.0%
!!! TCTTTGACTTGCAAAAAAAT+AGG + chr1_3:58014336-58014355 Msa0128350:intron 25.0%
!!! CTTTGACTTGCAAAAAAATA+GGG + chr1_3:58014337-58014356 Msa0128350:intron 25.0%
! TGCAAAAAAATAGGGTTAAT+AGG + chr1_3:58014345-58014364 Msa0128350:intron 25.0%
! GCAAAAAAATAGGGTTAATA+GGG + chr1_3:58014346-58014365 Msa0128350:intron 25.0%
! GTTAATAGGGTTAAACAAAT+CGG + chr1_3:58014359-58014378 Msa0128350:intron 25.0%
! AAACAGTAAATTTCAGCAAT+AGG + chr1_3:58014400-58014419 Msa0128350:intron 25.0%
! AACAGTAAATTTCAGCAATA+GGG + chr1_3:58014401-58014420 Msa0128350:intron 25.0%
!! TAGAGCTAAAATAAGTTTTC+GGG + chr1_3:58014437-58014456 Msa0128350:intron 25.0%
! GATGGATAGGAATAAAAAAA+AGG + chr1_3:58014624-58014643 Msa0128350:intron 25.0%
! GAGGATAGGAATAAAAAAAA+AGG + chr1_3:58014695-58014714 Msa0128350:intron 25.0%
! GATAGGAATAAAAAAAAAGG+AGG + chr1_3:58014762-58014781 Msa0128350:intron 25.0%
! GAATAAAAAAAAAGGAGGAT+AGG + chr1_3:58014767-58014786 Msa0128350:intron 25.0%
! AAAAATAATAAGGATTCGGA+TGG + chr1_3:58014799-58014818 Msa0128350:intron 25.0%
! CAGGATGATATGAATAAAAT+TGG + chr1_3:58015054-58015073 Msa0128350:intron 25.0%
! GCTTAAAAAAAAAGAAGGAT+AGG + chr1_3:58015147-58015166 Msa0128350:intron 25.0%
!! TTTTATTCCTATCCTCATTT+TGG - chr1_3:58015228-58015247 None:intergenic 25.0%
! GAGGATAGGAATAAAAAAAA+CGG + chr1_3:58014695-58014714 Msa0128350:intron 25.0%
! AAAAATAATAAGGATTCGGA+TGG + chr1_3:58014799-58014818 Msa0128350:intron 25.0%
!! GCAAACTTGATAACAAAATT+CGG + chr1_3:58015349-58015368 Msa0128350:intron 25.0%
! GATCAATGACTAAAATTGAA+TGG + chr1_3:58015393-58015412 Msa0128350:intron 25.0%
!!! GTGCAATTCATTTTTTTAGA+TGG + chr1_3:58015641-58015660 Msa0128350:intron 25.0%
! AACCTAATAAAGCAAATAAG+CGG + chr1_3:58015688-58015707 Msa0128350:intron 25.0%
! AAATAAGCGGGAAAAAAATT+AGG + chr1_3:58015701-58015720 Msa0128350:intron 25.0%
! TTCAAAAAAAAAAAGGCAAG+CGG + chr1_3:58016166-58016185 Msa0128350:intron 25.0%
!!! TGCATTTTTTTAGATGGAAT+TGG + chr1_3:58011295-58011314 Msa0128350:intron 25.0%
!!! TTTTTTAGATGGAATTGGTT+AGG + chr1_3:58016217-58016236 Msa0128350:intron 25.0%
! TTAATTGATGTCAGTCAATT+TGG - chr1_3:58016878-58016897 None:intergenic 25.0%
! CTGACATCAATTAATATCAT+TGG + chr1_3:58016884-58016903 Msa0128350:intron 25.0%
!! GATAATAGGTTTGAGATTTA+AGG + chr1_3:58016916-58016935 Msa0128350:intron 25.0%
! AGTACTTCTAAATGTTATGA+AGG + chr1_3:58017091-58017110 Msa0128350:intron 25.0%
! GCACTGCTTAAAATTATATT+TGG - chr1_3:58017539-58017558 None:intergenic 25.0%
!! TAACTTAAAGTTTCCACTTT+TGG - chr1_3:58017585-58017604 None:intergenic 25.0%
! AGTCTATATTTAATTGTGGT+CGG - chr1_3:58017792-58017811 None:intergenic 25.0%
! CAAAAGAATAAAATGTGCAT+CGG + chr1_3:58017925-58017944 Msa0128350:intron 25.0%
! AAAAGAATAAAATGTGCATC+GGG + chr1_3:58017926-58017945 Msa0128350:intron 25.0%
!!! AGTCCACTTTTGTATAAATT+AGG + chr1_3:58018028-58018047 Msa0128350:intron 25.0%
!! AAATGAGTTGACTCTAAATT+AGG - chr1_3:58017953-58017972 None:intergenic 25.0%
!! CAGTTTATTCTTTTGTGAAA+AGG + chr1_3:58018120-58018139 Msa0128350:intron 25.0%
!!! TGTTTTAGCCTAATAGAAAT+AGG - chr1_3:58018317-58018336 None:intergenic 25.0%
! TGCATGTCCTAAATAATTAT+TGG - chr1_3:58018634-58018653 None:intergenic 25.0%
! CATAAATACATACTGCATTA+TGG - chr1_3:58019021-58019040 None:intergenic 25.0%
! CTATAAATAGCCATGATATT+CGG + chr1_3:58019059-58019078 Msa0128350:intron 25.0%
! TATAAATAGCCATGATATTC+GGG + chr1_3:58019060-58019079 Msa0128350:intron 25.0%
! TCTTGTAATGTTTCAGAAAA+GGG - chr1_3:58019122-58019141 None:intergenic 25.0%
! TTCTTGTAATGTTTCAGAAA+AGG - chr1_3:58019123-58019142 None:intergenic 25.0%
!!! CTCATAATTTGTTTTGGATT+TGG - chr1_3:58019326-58019345 None:intergenic 25.0%
!! CTATAATTTACTTTGGGTTT+GGG - chr1_3:58019430-58019449 None:intergenic 25.0%
!! TCTATAATTTACTTTGGGTT+TGG - chr1_3:58019431-58019450 None:intergenic 25.0%
!!! TCATAATCTATTTTGGGTTT+GGG - chr1_3:58020057-58020076 None:intergenic 25.0%
!! GCATACTCATAATCTATTTT+GGG - chr1_3:58020063-58020082 None:intergenic 25.0%
!! TGCATACTCATAATCTATTT+TGG - chr1_3:58020064-58020083 None:intergenic 25.0%
!! TTTTCGCTTATATGATAGAA+AGG + chr1_3:58020363-58020382 Msa0128350:intron 25.0%
! CCTAACTAACATAAACTAAT+TGG - chr1_3:58020472-58020491 None:intergenic 25.0%
!! CCAATTAGTTTATGTTAGTT+AGG + chr1_3:58020469-58020488 Msa0128350:intron 25.0%
! GATAGTAAAGGTTATTACTA+TGG + chr1_3:58020632-58020651 Msa0128350:intron 25.0%
! GGATATGTTTAATAACCATT+AGG - chr1_3:58020869-58020888 None:intergenic 25.0%
! TGGTTATTAAACATATCCAT+TGG + chr1_3:58020871-58020890 Msa0128350:intron 25.0%
!! CCATAATTTGTTTCAGGTTT+AGG - chr1_3:58008673-58008692 None:intergenic 30.0%
CCTAAACCTGAAACAAATTA+TGG + chr1_3:58008670-58008689 Msa0128350:CDS 30.0%
GATATAGGTTTCTCAATCTT+TGG - chr1_3:58008709-58008728 None:intergenic 30.0%
!! CTTCGTTGTTTGATTTTGTT+TGG - chr1_3:58008753-58008772 None:intergenic 30.0%
!!! CCATAATCATTTTTGGGTTT+TGG - chr1_3:58008883-58008902 None:intergenic 30.0%
CCAAAACCCAAAAATGATTA+TGG + chr1_3:58008880-58008899 Msa0128350:CDS 30.0%
!!! AGGTTTCTCAATTTTTTCTG+GGG - chr1_3:58008917-58008936 None:intergenic 30.0%
!! ATTTGGTGTGTAAACTACTT+CGG - chr1_3:58008944-58008963 None:intergenic 30.0%
CCCAAACGTAAAACAAATTA+TGG + chr1_3:58008988-58009007 Msa0128350:CDS 30.0%
!! GTTTGATTTGTAAACTGCTT+CGG - chr1_3:58009049-58009068 None:intergenic 30.0%
!!! GCATACCCGTAATTTTTTTT+AGG - chr1_3:58009102-58009121 None:intergenic 30.0%
! ATTATAATCCGCTTCAAGTT+TGG - chr1_3:58009148-58009167 None:intergenic 30.0%
!!! CTTCATAATCTTGTTTTGTG+GGG - chr1_3:58009176-58009195 None:intergenic 30.0%
ATTTACAGAAAACTACTCCT+TGG - chr1_3:58009251-58009270 None:intergenic 30.0%
TACTATATTTACCATGTGTG+AGG + chr1_3:58009456-58009475 Msa0128350:intron 30.0%
ACTATATTTACCATGTGTGA+GGG + chr1_3:58009457-58009476 Msa0128350:intron 30.0%
TATTTAATGGAGAACTCTCT+AGG - chr1_3:58009652-58009671 None:intergenic 30.0%
AGATTACGATAAGAAGAAAG+AGG - chr1_3:58009719-58009738 None:intergenic 30.0%
! TTCTAAGAACCATTATGGAT+TGG - chr1_3:58009800-58009819 None:intergenic 30.0%
!! TCATGTTCTAAGAACCATTA+TGG - chr1_3:58009805-58009824 None:intergenic 30.0%
! TCTAAGATCAAATTCCTCAT+CGG - chr1_3:58010146-58010165 None:intergenic 30.0%
! TCACAAGTCTATTTCTTAAC+CGG + chr1_3:58010460-58010479 Msa0128350:intron 30.0%
ACCTCTTATGTAAAGAAACA+GGG - chr1_3:58010561-58010580 None:intergenic 30.0%
AACCTCTTATGTAAAGAAAC+AGG - chr1_3:58010562-58010581 None:intergenic 30.0%
GGTAATCCTATCAATAATTC+AGG + chr1_3:58011092-58011111 Msa0128350:intron 30.0%
CAAAAAAAAAGCAAGAGGAT+AGG + chr1_3:58011256-58011275 Msa0128350:intron 30.0%
AACCTAATAAAGCAAATGAG+CGG + chr1_3:58011336-58011355 Msa0128350:intron 30.0%
GACATTTCACCATCAAATAA+TGG - chr1_3:58011527-58011546 None:intergenic 30.0%
TTTGCTTATAAATGTGACCA+GGG - chr1_3:58011700-58011719 None:intergenic 30.0%
! TTTTGCTTATAAATGTGACC+AGG - chr1_3:58011701-58011720 None:intergenic 30.0%
GCTTAATAAATTACTCCATC+CGG - chr1_3:58011832-58011851 None:intergenic 30.0%
CCCTTTAAACAACCATTTAT+AGG + chr1_3:58012069-58012088 Msa0128350:intron 30.0%
! CATCATCCAAAAAAGTACAT+GGG - chr1_3:58012105-58012124 None:intergenic 30.0%
! TCATCATCCAAAAAAGTACA+TGG - chr1_3:58012106-58012125 None:intergenic 30.0%
AATGTGGAATCTCTAACAAT+CGG - chr1_3:58012134-58012153 None:intergenic 30.0%
TCAACAATAATAATGTGGAG+TGG + chr1_3:58012292-58012311 Msa0128350:intron 30.0%
!! TCTCTTTCTGAAAAGCTTTT+TGG + chr1_3:58012392-58012411 Msa0128350:intron 30.0%
CTCCTCAATTCCATTATATT+GGG + chr1_3:58012726-58012745 Msa0128350:intron 30.0%
TCCTCAATTCCATTATATTG+GGG + chr1_3:58012727-58012746 Msa0128350:intron 30.0%
ATATTGGGGAAAAAATGTTG+TGG + chr1_3:58012741-58012760 Msa0128350:intron 30.0%
TGAGTGATCACTCTATTTAT+AGG + chr1_3:58012879-58012898 Msa0128350:intron 30.0%
! TCACTCTATTTATAGGTTGA+TGG + chr1_3:58012886-58012905 Msa0128350:intron 30.0%
!! CACTCTATTTATAGGTTGAT+GGG + chr1_3:58012887-58012906 Msa0128350:intron 30.0%
!! AGGTTGATGGGATAAATTAA+AGG + chr1_3:58012899-58012918 Msa0128350:intron 30.0%
TTCAACAATGATTGATAAGG+AGG - chr1_3:58013022-58013041 None:intergenic 30.0%
! ACTTACATAATTTGTAGAGG+AGG + chr1_3:58013136-58013155 Msa0128350:intron 30.0%
! CTTACATAATTTGTAGAGGA+GGG + chr1_3:58013137-58013156 Msa0128350:intron 30.0%
!! ATGAATTATTGATTCGTTCG+AGG - chr1_3:58013312-58013331 None:intergenic 30.0%
! TCTTGAATATTTTGTCGTTG+AGG - chr1_3:58013443-58013462 None:intergenic 30.0%
TTGCATTCAGTTTCATGTTA+TGG - chr1_3:58013667-58013686 None:intergenic 30.0%
! ATTTTGTCAAAATCAGTGAC+TGG + chr1_3:58013720-58013739 Msa0128350:intron 30.0%
TGTGGTACAGTTAATCTTAA+TGG - chr1_3:58013852-58013871 None:intergenic 30.0%
TAAGATTAACTGTACCACAA+AGG + chr1_3:58013853-58013872 Msa0128350:intron 30.0%
! ATTCATTTTGTCTATGAGTC+CGG - chr1_3:58013901-58013920 None:intergenic 30.0%
AGGCCACATTAAATGTTTAA+TGG + chr1_3:58014014-58014033 Msa0128350:intron 30.0%
TGGATATGCAACAGATAAAT+GGG + chr1_3:58014139-58014158 Msa0128350:intron 30.0%
ACAAATCGGAATTAAGCTTT+AGG + chr1_3:58014373-58014392 Msa0128350:intron 30.0%
CAAATCGGAATTAAGCTTTA+GGG + chr1_3:58014374-58014393 Msa0128350:intron 30.0%
AAATTTCAGCAATAGGGTTT+AGG + chr1_3:58014407-58014426 Msa0128350:intron 30.0%
TGCTTCATAAAAAAAAAGGC+CGG + chr1_3:58014499-58014518 Msa0128350:intron 30.0%
GCTTAAAAAAAGAGATGGAT+AGG + chr1_3:58014611-58014630 Msa0128350:intron 30.0%
GGATAGGAATAAAAAAAAGG+AGG + chr1_3:58014627-58014646 Msa0128350:intron 30.0%
GGAATAAAAAAAAGGAGGAT+AGG + chr1_3:58014632-58014651 Msa0128350:intron 30.0%
AATAATAATAAGGATTCGGC+CGG + chr1_3:58014665-58014684 Msa0128350:intron 30.0%
! TTTTATTCCTATCCTCCTTT+TGG - chr1_3:58014691-58014710 None:intergenic 30.0%
GGAGGATAGGAATAAAAAAA+AGG + chr1_3:58014694-58014713 Msa0128350:intron 30.0%
GGATAGGAATAAAAAAAAGG+AGG + chr1_3:58014627-58014646 Msa0128350:intron 30.0%
GGAATAAAAAAAAGGAGGAT+AGG + chr1_3:58014632-58014651 Msa0128350:intron 30.0%
AAGGATTCGAAAAAAAAAGG+AGG + chr1_3:58014740-58014759 Msa0128350:intron 30.0%
TTCGAAAAAAAAAGGAGGAT+AGG + chr1_3:58014745-58014764 Msa0128350:intron 30.0%
! GCAAACTTGATAGCAAAATT+CGG + chr1_3:58014833-58014852 Msa0128350:intron 30.0%
GATCAATGCCTAAAATTGAA+TGG + chr1_3:58014877-58014896 Msa0128350:intron 30.0%
TTAGGGTTAGAAATAGCTTT+AGG + chr1_3:58014960-58014979 Msa0128350:intron 30.0%
! TAGGGTTAGAAATAGCTTTA+GGG + chr1_3:58014961-58014980 Msa0128350:intron 30.0%
TGCTTCATAAAAAAAAAGGC+AGG + chr1_3:58014499-58014518 Msa0128350:intron 30.0%
AATAATAATAAGGATTCGGC+CGG + chr1_3:58014665-58014684 Msa0128350:intron 30.0%
GATAGGAATAAAAAAAACGG+AGG + chr1_3:58015235-58015254 Msa0128350:intron 30.0%
GAATAAAAAAAACGGAGGAT+AGG + chr1_3:58015240-58015259 Msa0128350:intron 30.0%
AAGGATTCGAAAATAAAAGG+AGG + chr1_3:58015278-58015297 Msa0128350:intron 30.0%
TTCGAAAATAAAAGGAGGAT+AGG + chr1_3:58015283-58015302 Msa0128350:intron 30.0%
CAATGGCTCAGAAAATATTA+GGG + chr1_3:58015435-58015454 Msa0128350:intron 30.0%
TTAGGGTTAGAAATAGCTTT+AGG + chr1_3:58014960-58014979 Msa0128350:intron 30.0%
! TAGGGTTAGAAATAGCTTTA+GGG + chr1_3:58014961-58014980 Msa0128350:intron 30.0%
AAAAAAAAAGGCAAGCAGAT+AGG + chr1_3:58015606-58015625 Msa0128350:intron 30.0%
ACCTAATAAAGCAAATAAGC+GGG + chr1_3:58015689-58015708 Msa0128350:intron 30.0%
GGTAATCCTATCAATAAATC+AGG + chr1_3:58015782-58015801 Msa0128350:intron 30.0%
ACCAAGTTTACATGGAAATT+AGG + chr1_3:58015813-58015832 Msa0128350:intron 30.0%
CCAAGTTTACATGGAAATTA+GGG + chr1_3:58015814-58015833 Msa0128350:intron 30.0%
TCTTCAAAAAAAAAGGCAAG+AGG + chr1_3:58015601-58015620 Msa0128350:intron 30.0%
AAAAAAAAAGGCAAGAGGAT+AGG + chr1_3:58015944-58015963 Msa0128350:intron 30.0%
!!! GTGCGATGCATTTTTTTATA+TGG + chr1_3:58015977-58015996 Msa0128350:intron 30.0%
AACCTAATAAAGCAAATGAG+CGG + chr1_3:58011336-58011355 Msa0128350:intron 30.0%
CAAATGAGCGGAAAAAAATT+AGG + chr1_3:58016036-58016055 Msa0128350:intron 30.0%
!!! GTGCAATGCATTTTTTTAGA+TGG + chr1_3:58016206-58016225 Msa0128350:intron 30.0%
AACCTAATAAAGCAAATGAG+CGG + chr1_3:58011336-58011355 Msa0128350:intron 30.0%
AATAAATAAGGTAAGCGGAT+AGG + chr1_3:58016315-58016334 Msa0128350:intron 30.0%
!!! GTGCAATGCATTTTTTTAGA+TGG + chr1_3:58016206-58016225 Msa0128350:intron 30.0%
ATCATACGTGATCATTGATA+TGG + chr1_3:58016606-58016625 Msa0128350:intron 30.0%
!!! GTGCAATGCATTTTTTTAGA+TGG + chr1_3:58016206-58016225 Msa0128350:intron 30.0%
AACCTAATAAAGCAAATGAG+CGG + chr1_3:58011336-58011355 Msa0128350:intron 30.0%
! AATAGGTTTGAGATTTAAGG+CGG + chr1_3:58016919-58016938 Msa0128350:intron 30.0%
ATTCACTACTTTGCAATTCA+TGG - chr1_3:58016973-58016992 None:intergenic 30.0%
ACACATCTCAATCTTGAAAA+AGG + chr1_3:58017145-58017164 Msa0128350:intron 30.0%
CACATCTCAATCTTGAAAAA+GGG + chr1_3:58017146-58017165 Msa0128350:intron 30.0%
! ATTTTTGCCGAAAATCATAG+TGG + chr1_3:58017185-58017204 Msa0128350:intron 30.0%
! TTTTTGCCGAAAATCATAGT+GGG + chr1_3:58017186-58017205 Msa0128350:intron 30.0%
CGACAATATAAGACGATATA+AGG - chr1_3:58017233-58017252 None:intergenic 30.0%
!! GATAAGAGGTGTCAATTTAT+TGG - chr1_3:58017382-58017401 None:intergenic 30.0%
ACATAAATACCATCTTATCG+AGG + chr1_3:58017881-58017900 Msa0128350:intron 30.0%
CATAAATACCATCTTATCGA+GGG + chr1_3:58017882-58017901 Msa0128350:intron 30.0%
! ATTTATACAAAAGTGGACTC+AGG - chr1_3:58018027-58018046 None:intergenic 30.0%
AAAAGAATAAACTGTGCATC+GGG - chr1_3:58018114-58018133 None:intergenic 30.0%
CAAAAGAATAAACTGTGCAT+CGG - chr1_3:58018115-58018134 None:intergenic 30.0%
AGGCTAAAACACATTTATGT+TGG + chr1_3:58018326-58018345 Msa0128350:intron 30.0%
GGCTAAAACACATTTATGTT+GGG + chr1_3:58018327-58018346 Msa0128350:intron 30.0%
TTCAACGTATAGTAAACAAG+CGG - chr1_3:58018530-58018549 None:intergenic 30.0%
GAAAATATATGTTAGCTAGC+TGG + chr1_3:58018555-58018574 Msa0128350:intron 30.0%
TGGATTATATCTCTACTACA+TGG - chr1_3:58018581-58018600 None:intergenic 30.0%
! TTATTTAGGACATGCAATTC+AGG + chr1_3:58018638-58018657 Msa0128350:intron 30.0%
ATAAGATGTAGGATATGACA+TGG - chr1_3:58018678-58018697 None:intergenic 30.0%
ACACACTTAGAGCATATAAT+TGG - chr1_3:58018768-58018787 None:intergenic 30.0%
TTCTAGGTAAATATAAGGAG+GGG - chr1_3:58018935-58018954 None:intergenic 30.0%
! GTTCTAGGTAAATATAAGGA+GGG - chr1_3:58018936-58018955 None:intergenic 30.0%
!! AGTTCTAGGTAAATATAAGG+AGG - chr1_3:58018937-58018956 None:intergenic 30.0%
!! TGGAGTATTGAATAATTGGA+TGG - chr1_3:58019001-58019020 None:intergenic 30.0%
ATAAATAGCCATGATATTCG+GGG + chr1_3:58019061-58019080 Msa0128350:intron 30.0%
TTCTTATCTACTTCAGTTTG+GGG - chr1_3:58019271-58019290 None:intergenic 30.0%
CTTCTTATCTACTTCAGTTT+GGG - chr1_3:58019272-58019291 None:intergenic 30.0%
ACTTCTTATCTACTTCAGTT+TGG - chr1_3:58019273-58019292 None:intergenic 30.0%
TTCGTAATCTATATCGAGTT+TGG - chr1_3:58019377-58019396 None:intergenic 30.0%
AGGTGTTTGTAATATGTTTC+GGG - chr1_3:58019487-58019506 None:intergenic 30.0%
! GAGGTGTTTGTAATATGTTT+CGG - chr1_3:58019488-58019507 None:intergenic 30.0%
GTTTGATGAGTAAACTTCTT+CGG - chr1_3:58019590-58019609 None:intergenic 30.0%
!!! CCATAATCTATTTTGGGTTT+GGG - chr1_3:58019637-58019656 None:intergenic 30.0%
! GCATAGCCATAATCTATTTT+GGG - chr1_3:58019643-58019662 None:intergenic 30.0%
! TGCATAGCCATAATCTATTT+TGG - chr1_3:58019644-58019663 None:intergenic 30.0%
!!! TCATAATCTGTTTTGGGTTT+GGG - chr1_3:58019847-58019866 None:intergenic 30.0%
! GCATACTCATAATCTGTTTT+GGG - chr1_3:58019853-58019872 None:intergenic 30.0%
!! ACTTTATAGTCAGGTTTTGT+GGG - chr1_3:58019928-58019947 None:intergenic 30.0%
! AACTTTATAGTCAGGTTTTG+TGG - chr1_3:58019929-58019948 None:intergenic 30.0%
!!! CCATAATCAGTTTTGGATTT+GGG - chr1_3:58019952-58019971 None:intergenic 30.0%
CCAAATCCAAAACTGATTAT+GGG + chr1_3:58019950-58019969 Msa0128350:CDS 30.0%
!! ACTTGGATTTTTCGATTTTG+GGG - chr1_3:58019987-58020006 None:intergenic 30.0%
!! GACTTGGATTTTTCGATTTT+GGG - chr1_3:58019988-58020007 None:intergenic 30.0%
!! AGACTTGGATTTTTCGATTT+TGG - chr1_3:58019989-58020008 None:intergenic 30.0%
!!! ACTTCATAGTTTGGTTTTGT+GGG - chr1_3:58020033-58020052 None:intergenic 30.0%
!!! AACTTCATAGTTTGGTTTTG+TGG - chr1_3:58020034-58020053 None:intergenic 30.0%
!!! CTCATAATCTATTTTGGGTT+TGG - chr1_3:58020058-58020077 None:intergenic 30.0%
!!! AATTTCATAGTCTGGTTTTG+TGG - chr1_3:58020139-58020158 None:intergenic 30.0%
!!! ACTTCATAATCTGGTTTTGT+GGG - chr1_3:58020237-58020256 None:intergenic 30.0%
!!! AACTTCATAATCTGGTTTTG+TGG - chr1_3:58020238-58020257 None:intergenic 30.0%
!!! TCGTAGTTTTCTTTTGGTTT+TGG - chr1_3:58020261-58020280 None:intergenic 30.0%
AGCGAAAAATTACCTTGAAT+TGG - chr1_3:58020351-58020370 None:intergenic 30.0%
AGACATGTAACAGATAGTAA+AGG + chr1_3:58020620-58020639 Msa0128350:CDS 30.0%
!! ACAATCTGGAATTGTTTTCA+AGG - chr1_3:58020802-58020821 None:intergenic 30.0%
GTTTAATAACCATTAGGAAC+TGG - chr1_3:58020863-58020882 None:intergenic 30.0%
!! ATTGGCTTTCCAAAGAAAAT+GGG + chr1_3:58020889-58020908 Msa0128350:intron 30.0%
! CATGTTTATCCCATTTTCTT+TGG - chr1_3:58020901-58020920 None:intergenic 30.0%
CAAAGAAAATGGGATAAACA+TGG + chr1_3:58020899-58020918 Msa0128350:intron 30.0%
AAGAATAAAGGTGGTGAAGA+TGG - chr1_3:58008452-58008471 None:intergenic 35.0%
!! GTTTTAGGCTTCTCAATGTT+TGG - chr1_3:58008523-58008542 None:intergenic 35.0%
!! CCATACCCATAATTTGTTTC+AGG - chr1_3:58008679-58008698 None:intergenic 35.0%
CCTGAAACAAATTATGGGTA+TGG + chr1_3:58008676-58008695 Msa0128350:CDS 35.0%
!!! GCAAAATGAGTTTTGGGTTT+GGG - chr1_3:58008778-58008797 None:intergenic 35.0%
!!! AGCAAAATGAGTTTTGGGTT+TGG - chr1_3:58008779-58008798 None:intergenic 35.0%
TATAGTCCAACCCTAAAGAA+TGG + chr1_3:58008799-58008818 Msa0128350:CDS 35.0%
ATAGTCCAACCCTAAAGAAT+GGG + chr1_3:58008800-58008819 Msa0128350:CDS 35.0%
! TTTGGGTTTCCCATTCTTTA+GGG - chr1_3:58008812-58008831 None:intergenic 35.0%
! ATTTGGGTTTCCCATTCTTT+AGG - chr1_3:58008813-58008832 None:intergenic 35.0%
!! GTTTGTTGTGTAAACTGCAT+CGG - chr1_3:58008836-58008855 None:intergenic 35.0%
CAAATCAAACCTCACAAAGT+CGG + chr1_3:58009059-58009078 Msa0128350:CDS 35.0%
ATTTATAGTCCGACTTTGTG+AGG - chr1_3:58009071-58009090 None:intergenic 35.0%
AGTTTGGATTTCTCGATCTT+TGG - chr1_3:58009132-58009151 None:intergenic 35.0%
! GGAGTAGTTTTCTGTAAATC+AGG + chr1_3:58009252-58009271 Msa0128350:CDS 35.0%
CTATATTTACCATGTGTGAG+GGG + chr1_3:58009458-58009477 Msa0128350:intron 35.0%
CATGGCTGAATACTGATATA+GGG - chr1_3:58009544-58009563 None:intergenic 35.0%
CAAGCTAAACCAATCCATAA+TGG + chr1_3:58009788-58009807 Msa0128350:CDS 35.0%
! CACTTTATTTGACAAGCCAA+TGG - chr1_3:58009828-58009847 None:intergenic 35.0%
!! CATTGGCTTGTCAAATAAAG+TGG + chr1_3:58009826-58009845 Msa0128350:intron 35.0%
TTATTCAAACAACACCGATG+AGG + chr1_3:58010129-58010148 Msa0128350:intron 35.0%
! AGTTGAGATGTTGAAGCATT+TGG - chr1_3:58010399-58010418 None:intergenic 35.0%
! ACCCTGTTTCTTTACATAAG+AGG + chr1_3:58010557-58010576 Msa0128350:intron 35.0%
!!! TCTCAATTCTCTCTGGTTTT+TGG - chr1_3:58010859-58010878 None:intergenic 35.0%
ACCAAGTTTCCATGGAAATT+AGG + chr1_3:58011123-58011142 Msa0128350:intron 35.0%
CCAAGTTTCCATGGAAATTA+GGG + chr1_3:58011124-58011143 Msa0128350:intron 35.0%
CAAGAGGATAGGAATGAAAT+TGG + chr1_3:58011267-58011286 Msa0128350:intron 35.0%
!!! GTGCGATGCATTTTTTTAGA+TGG + chr1_3:58011289-58011308 Msa0128350:intron 35.0%
ACCTAATAAAGCAAATGAGC+GGG + chr1_3:58011337-58011356 Msa0128350:intron 35.0%
CAAATGAGCGGGAAAAAATT+AGG + chr1_3:58011348-58011367 Msa0128350:intron 35.0%
TTGCTTATAAATGTGACCAG+GGG - chr1_3:58011699-58011718 None:intergenic 35.0%
ACAACCATTTATAGGTGGTA+TGG + chr1_3:58012077-58012096 Msa0128350:intron 35.0%
!!! ATGGTACCCATGTACTTTTT+TGG + chr1_3:58012096-58012115 Msa0128350:intron 35.0%
TTGTTAGAGATTCCACATTG+AGG + chr1_3:58012135-58012154 Msa0128350:intron 35.0%
! ATTGACTTTAAGCCTCAATG+TGG - chr1_3:58012150-58012169 None:intergenic 35.0%
ACTCATAGCATGATTCTCAA+TGG - chr1_3:58012359-58012378 None:intergenic 35.0%
!! AGGGTGTTGAATAAGTGTTA+GGG - chr1_3:58012551-58012570 None:intergenic 35.0%
!! TAGGGTGTTGAATAAGTGTT+AGG - chr1_3:58012552-58012571 None:intergenic 35.0%
GCTCCTCAATTCCATTATAT+TGG + chr1_3:58012725-58012744 Msa0128350:intron 35.0%
! TCCCCAATATAATGGAATTG+AGG - chr1_3:58012731-58012750 None:intergenic 35.0%
TGATGCAGAGACAAAAAGTT+GGG - chr1_3:58012980-58012999 None:intergenic 35.0%
TTGATGCAGAGACAAAAAGT+TGG - chr1_3:58012981-58013000 None:intergenic 35.0%
! CTTTTTGTCTCTGCATCAAA+AGG + chr1_3:58012982-58013001 Msa0128350:intron 35.0%
AATTTGTAGAGGAGGGAATT+TGG + chr1_3:58013144-58013163 Msa0128350:intron 35.0%
CTTCATCAACAACATGGTTT+GGG - chr1_3:58013239-58013258 None:intergenic 35.0%
TCTTCATCAACAACATGGTT+TGG - chr1_3:58013240-58013259 None:intergenic 35.0%
ACTGTTCTTCATCAACAACA+TGG - chr1_3:58013245-58013264 None:intergenic 35.0%
!!! GCTTTGGAATAGTGAGTTTT+AGG - chr1_3:58013268-58013287 None:intergenic 35.0%
!! CCTTTTCTTTTGAGGATAGT+TGG - chr1_3:58013385-58013404 None:intergenic 35.0%
CCAACTATCCTCAAAAGAAA+AGG + chr1_3:58013382-58013401 Msa0128350:intron 35.0%
! GTGCAATTCCTTTTCTTTTG+AGG - chr1_3:58013393-58013412 None:intergenic 35.0%
CGACAAAATATTCAAGACGA+CGG + chr1_3:58013446-58013465 Msa0128350:intron 35.0%
CTGTATCACTCAGTTTCTTA+AGG - chr1_3:58013504-58013523 None:intergenic 35.0%
GTCCAGTACAGGAAAAAAAA+CGG + chr1_3:58013622-58013641 Msa0128350:intron 35.0%
GTGACTGGATTTAGATTCAA+AGG + chr1_3:58013735-58013754 Msa0128350:intron 35.0%
!! TTTGGTTCTAATCAGTTGCT+TGG - chr1_3:58013777-58013796 None:intergenic 35.0%
TATGAGTCCGGTATAAATAG+TGG - chr1_3:58013889-58013908 None:intergenic 35.0%
CATGTGTACACAATGAATTG+AGG + chr1_3:58013935-58013954 Msa0128350:intron 35.0%
TACACAATGAATTGAGGAGT+TGG + chr1_3:58013941-58013960 Msa0128350:intron 35.0%
! ATACAAATTCACTTGCTGCA+TGG + chr1_3:58013980-58013999 Msa0128350:intron 35.0%
GTGGATATGCAACAGATAAA+TGG + chr1_3:58014138-58014157 Msa0128350:intron 35.0%
! TTTTGTTAGTAGGAGTGGAT+AGG + chr1_3:58014242-58014261 Msa0128350:intron 35.0%
CTGTTTAGTAGGAAACGATA+AGG + chr1_3:58014303-58014322 Msa0128350:intron 35.0%
TTCATAAAAAAAAAGGCCGG+AGG + chr1_3:58014502-58014521 Msa0128350:intron 35.0%
! CCAATTTTATTCCTATCCTC+CGG - chr1_3:58014521-58014540 None:intergenic 35.0%
! TTTAGGCGCCATTCAATTTT+AGG - chr1_3:58014888-58014907 None:intergenic 35.0%
!! AGGGTTAGAAATAGCTTTAG+GGG + chr1_3:58014962-58014981 Msa0128350:intron 35.0%
!!! GTGCGATGCATTTTTTTAGA+TGG + chr1_3:58011289-58011308 Msa0128350:intron 35.0%
! ACTTGATAACAAAATTCGGC+TGG + chr1_3:58015353-58015372 Msa0128350:intron 35.0%
! CCTAATATTTTCTGAGCCAT+TGG - chr1_3:58015437-58015456 None:intergenic 35.0%
CCAATGGCTCAGAAAATATT+AGG + chr1_3:58015434-58015453 Msa0128350:intron 35.0%
!! AGGGTTAGAAATAGCTTTAG+GGG + chr1_3:58014962-58014981 Msa0128350:intron 35.0%
CAAGCAGATAGGAATGAAAT+TGG + chr1_3:58015617-58015636 Msa0128350:intron 35.0%
! TCCCGCTTATTTGCTTTATT+AGG - chr1_3:58015693-58015712 None:intergenic 35.0%
CCCTAATTTCCATGTAAACT+TGG - chr1_3:58015817-58015836 None:intergenic 35.0%
CAAGAGGATAGGAATGAAAT+TGG + chr1_3:58011267-58011286 Msa0128350:intron 35.0%
! TTCCGCTCATTTGCTTTATT+AGG - chr1_3:58016029-58016048 None:intergenic 35.0%
AAAAAAAAAGGCAAGCGGAT+AGG + chr1_3:58016171-58016190 Msa0128350:intron 35.0%
ACCTAATAAAGCAAATGAGC+GGG + chr1_3:58011337-58011356 Msa0128350:intron 35.0%
CAAATGAGCGGGAAAAAATT+AGG + chr1_3:58011348-58011367 Msa0128350:intron 35.0%
TAAGCGGATAGGAATGAAAT+TGG + chr1_3:58016326-58016345 Msa0128350:intron 35.0%
AACCTAATGAAGCAAATGAG+CGG + chr1_3:58016397-58016416 Msa0128350:intron 35.0%
CAAATGAGCGGGAAAAAATT+AGG + chr1_3:58011348-58011367 Msa0128350:intron 35.0%
CTTCAACAAAAAAAGGCAAG+TGG + chr1_3:58016642-58016661 Msa0128350:intron 35.0%
ACAAAAAAAGGCAAGTGGAT+AGG + chr1_3:58016647-58016666 Msa0128350:intron 35.0%
CAAGTGGATAGGAATGAAAT+TGG + chr1_3:58016658-58016677 Msa0128350:intron 35.0%
ACCTAATAAAGCAAATGAGC+GGG + chr1_3:58011337-58011356 Msa0128350:intron 35.0%
ACTACTTTGCAATTCATGGT+CGG - chr1_3:58016969-58016988 None:intergenic 35.0%
! GCATATCCCACTATGATTTT+CGG - chr1_3:58017195-58017214 None:intergenic 35.0%
TATGTGGGACTGTTGTAAAA+TGG - chr1_3:58017317-58017336 None:intergenic 35.0%
GTGAGATACAAATCTCAAGA+AGG + chr1_3:58017460-58017479 Msa0128350:intron 35.0%
AAATTTAGCACTCCCATTAG+TGG - chr1_3:58017848-58017867 None:intergenic 35.0%
ATGTTGTGAGATGAATGACT+AGG + chr1_3:58017975-58017994 Msa0128350:intron 35.0%
! GACTCAGGTTGCTATAAATT+AGG - chr1_3:58018012-58018031 None:intergenic 35.0%
!! TGATGTTAACTTGTGTCCTT+AGG + chr1_3:58018144-58018163 Msa0128350:intron 35.0%
!! GATGTTAACTTGTGTCCTTA+GGG + chr1_3:58018145-58018164 Msa0128350:intron 35.0%
ATTGTTTAACATGTGCCCTA+AGG - chr1_3:58018163-58018182 None:intergenic 35.0%
ATATCTTAACATGTGCCTTG+AGG + chr1_3:58018274-58018293 Msa0128350:intron 35.0%
TATCTTAACATGTGCCTTGA+GGG + chr1_3:58018275-58018294 Msa0128350:intron 35.0%
! TGTTAAGCCTCCATTTTGTA+TGG + chr1_3:58018406-58018425 Msa0128350:intron 35.0%
TATAGTAAACAAGCGGCTAA+TGG - chr1_3:58018523-58018542 None:intergenic 35.0%
GTAGATCTAGTCATGTATTG+CGG + chr1_3:58018827-58018846 Msa0128350:intron 35.0%
ATTGGATGGACCAAGATAAT+TGG - chr1_3:58018987-58019006 None:intergenic 35.0%
TAGTAAATGCTTCAAAGCAG+TGG - chr1_3:58019099-58019118 None:intergenic 35.0%
AAGGATAGAGATAGCGAAAA+TGG - chr1_3:58019173-58019192 None:intergenic 35.0%
ACCATACACATAATCAGTTG+CGG - chr1_3:58019221-58019240 None:intergenic 35.0%
GGTTTGGGAACTTTATAGTT+TGG - chr1_3:58019415-58019434 None:intergenic 35.0%
!! TTGTAATATGTTTCGGGTTC+AGG - chr1_3:58019481-58019500 None:intergenic 35.0%
! CTATACCCGTAGTCTATTTT+AGG - chr1_3:58019538-58019557 None:intergenic 35.0%
!!! ACTTCATAGTCTGGTTTTGT+GGG - chr1_3:58019613-58019632 None:intergenic 35.0%
!!! AACTTCATAGTCTGGTTTTG+TGG - chr1_3:58019614-58019633 None:intergenic 35.0%
CCCAAACCCAAAATAGATTA+TGG + chr1_3:58019634-58019653 Msa0128350:CDS 35.0%
!!! GCCATAATCTATTTTGGGTT+TGG - chr1_3:58019638-58019657 None:intergenic 35.0%
AATAGATTATGGCTATGCAC+CGG + chr1_3:58019645-58019664 Msa0128350:CDS 35.0%
!! ACTTCATAGTCCAGTTTTGT+GGG - chr1_3:58019718-58019737 None:intergenic 35.0%
! AACTTCATAGTCCAGTTTTG+TGG - chr1_3:58019719-58019738 None:intergenic 35.0%
! ACTTTGGTTTCTCAATCTTG+GGG - chr1_3:58019777-58019796 None:intergenic 35.0%
! GACTTTGGTTTCTCAATCTT+GGG - chr1_3:58019778-58019797 None:intergenic 35.0%
!! GTTTGGTGTGTAAATTGCTT+CGG - chr1_3:58019800-58019819 None:intergenic 35.0%
!!! ACTTCATAGTCTGGTTTTGT+GGG - chr1_3:58019613-58019632 None:intergenic 35.0%
!!! AACTTCATAGTCTGGTTTTG+TGG - chr1_3:58019614-58019633 None:intergenic 35.0%
!!! CTCATAATCTGTTTTGGGTT+TGG - chr1_3:58019848-58019867 None:intergenic 35.0%
! GGCATACTCATAATCTGTTT+TGG - chr1_3:58019854-58019873 None:intergenic 35.0%
GTGTAAACTACTTCAGACTT+TGG - chr1_3:58019898-58019917 None:intergenic 35.0%
!! CTTTATAGTCAGGTTTTGTG+GGG - chr1_3:58019927-58019946 None:intergenic 35.0%
GATTTGGGAACTTTATAGTC+AGG - chr1_3:58019937-58019956 None:intergenic 35.0%
CCCAAATCCAAAACTGATTA+TGG + chr1_3:58019949-58019968 Msa0128350:CDS 35.0%
!!! CCCATAATCAGTTTTGGATT+TGG - chr1_3:58019953-58019972 None:intergenic 35.0%
!! CTTGGATTTTTCGATTTTGG+GGG - chr1_3:58019986-58020005 None:intergenic 35.0%
!!! CTTCATAGTTTGGTTTTGTG+GGG - chr1_3:58020032-58020051 None:intergenic 35.0%
!!! TAGTCTGGTTTTGTGGATTT+TGG - chr1_3:58020132-58020151 None:intergenic 35.0%
GATTTGGGAATTTCATAGTC+TGG - chr1_3:58020147-58020166 None:intergenic 35.0%
!!! TTTCTCGATTTTTGGTGTTG+GGG - chr1_3:58020184-58020203 None:intergenic 35.0%
!!! GTTTCTCGATTTTTGGTGTT+GGG - chr1_3:58020185-58020204 None:intergenic 35.0%
!! AGTTTGGGTTTCTCGATTTT+TGG - chr1_3:58020192-58020211 None:intergenic 35.0%
!!! CTTCATAATCTGGTTTTGTG+GGG - chr1_3:58020236-58020255 None:intergenic 35.0%
!!! GGTTTTGGAACTTCATAATC+TGG - chr1_3:58020246-58020265 None:intergenic 35.0%
! TGCACTTCGTAGTTTTCTTT+TGG - chr1_3:58020267-58020286 None:intergenic 35.0%
CCTTGAACACTAATGATTGT+GGG - chr1_3:58020294-58020313 None:intergenic 35.0%
TCCTTGAACACTAATGATTG+TGG - chr1_3:58020295-58020314 None:intergenic 35.0%
AATCATTAGTGTTCAAGGAG+TGG + chr1_3:58020296-58020315 Msa0128350:CDS 35.0%
TTATCATGTGTGAGAAATGC+AGG + chr1_3:58020527-58020546 Msa0128350:intron 35.0%
TATCATGTGTGAGAAATGCA+GGG + chr1_3:58020528-58020547 Msa0128350:intron 35.0%
ACATGTCTCAATCCTGTTAT+AGG - chr1_3:58020608-58020627 None:intergenic 35.0%
GGAACTTTACATGTCTCTAA+TGG - chr1_3:58020728-58020747 None:intergenic 35.0%
!! TGGAATTGTTTTCAAGGAGA+CGG - chr1_3:58020796-58020815 None:intergenic 35.0%
ATAACCATTAGGAACTGGTT+TGG - chr1_3:58020858-58020877 None:intergenic 35.0%
!! CATTTTCTTTGGAAAGCCAA+TGG - chr1_3:58020890-58020909 None:intergenic 35.0%
!! CATTGGCTTTCCAAAGAAAA+TGG + chr1_3:58020888-58020907 Msa0128350:intron 35.0%
ATTGCCTCTGCAACTGATTA+TGG + chr1_3:58008490-58008509 Msa0128350:CDS 40.0%
GGTTTCTCAATCTTTGGTGA+TGG - chr1_3:58008703-58008722 None:intergenic 40.0%
TTGTAGACTGCTTCCGATAT+AGG - chr1_3:58008724-58008743 None:intergenic 40.0%
GTGTAAACTGCATCGGATTT+GGG - chr1_3:58008829-58008848 None:intergenic 40.0%
TGTGTAAACTGCATCGGATT+TGG - chr1_3:58008830-58008849 None:intergenic 40.0%
GTGTAAACTACTTCGGACTT+AGG - chr1_3:58008937-58008956 None:intergenic 40.0%
TTGTCTGGGTTTGTGGTATT+TGG - chr1_3:58008961-58008980 None:intergenic 40.0%
AACATCATTGTCTGGGTTTG+TGG - chr1_3:58008968-58008987 None:intergenic 40.0%
GTTTGGGAACATCATTGTCT+GGG - chr1_3:58008975-58008994 None:intergenic 40.0%
CTTGGGGTTCTCAATCTTTA+GGG - chr1_3:58009025-58009044 None:intergenic 40.0%
ACTTGGGGTTCTCAATCTTT+AGG - chr1_3:58009026-58009045 None:intergenic 40.0%
TTGTAAACTGCTTCGGACTT+GGG - chr1_3:58009042-58009061 None:intergenic 40.0%
TTTGTAAACTGCTTCGGACT+TGG - chr1_3:58009043-58009062 None:intergenic 40.0%
!! GATTTCTCGATCTTTGGAGT+TGG - chr1_3:58009126-58009145 None:intergenic 40.0%
CGAGAAATCCAAACTTGAAG+CGG + chr1_3:58009137-58009156 Msa0128350:CDS 40.0%
GTGCAAATTCCTACATCCAT+TGG + chr1_3:58009222-58009241 Msa0128350:CDS 40.0%
TGTAGATGTGTGAATGAGCT+TGG + chr1_3:58009506-58009525 Msa0128350:CDS 40.0%
GCATGGCTGAATACTGATAT+AGG - chr1_3:58009545-58009564 None:intergenic 40.0%
AACCTTTACCATCTGTTGCA+TGG - chr1_3:58009562-58009581 None:intergenic 40.0%
ACACTGTCACATTCAAAGCT+TGG + chr1_3:58009593-58009612 Msa0128350:CDS 40.0%
ACTAATCCCATGGTTCACAT+TGG - chr1_3:58009690-58009709 None:intergenic 40.0%
AATGTGAACCATGGGATTAG+TGG + chr1_3:58009689-58009708 Msa0128350:CDS 40.0%
! TGAGAAGTGTAGAAGAAAGG+TGG - chr1_3:58009770-58009789 None:intergenic 40.0%
! GCTTGAGAAGTGTAGAAGAA+AGG - chr1_3:58009773-58009792 None:intergenic 40.0%
GGTTCTTAGAACATGACCAT+TGG + chr1_3:58009809-58009828 Msa0128350:intron 40.0%
GCTGCAAAGTTGAAGAAGAA+TGG + chr1_3:58009867-58009886 Msa0128350:intron 40.0%
CTTGCGAATCATACAAGTGT+AGG + chr1_3:58010306-58010325 Msa0128350:intron 40.0%
!!! CCGGGTTACTTTTTTTAAGG+CGG - chr1_3:58010497-58010516 None:intergenic 40.0%
CCGCCTTAAAAAAAGTAACC+CGG + chr1_3:58010494-58010513 Msa0128350:intron 40.0%
!!! GCACCGGGTTACTTTTTTTA+AGG - chr1_3:58010500-58010519 None:intergenic 40.0%
TACGTACAATACACGTATGC+GGG - chr1_3:58010532-58010551 None:intergenic 40.0%
CTACGTACAATACACGTATG+CGG - chr1_3:58010533-58010552 None:intergenic 40.0%
! AAGGTCACGAGTTTAAGTTC+TGG - chr1_3:58010589-58010608 None:intergenic 40.0%
TAAAGTTGTCGTCATGTGAC+TGG - chr1_3:58010612-58010631 None:intergenic 40.0%
!!! TCTCTCTGGTTTTTGGCAAA+AGG - chr1_3:58010852-58010871 None:intergenic 40.0%
TCCGCTCGGGTTTATTATAA+AGG + chr1_3:58010936-58010955 Msa0128350:intron 40.0%
CCCTTTATAATAAACCCGAG+CGG - chr1_3:58010940-58010959 None:intergenic 40.0%
CCGCTCGGGTTTATTATAAA+GGG + chr1_3:58010937-58010956 Msa0128350:intron 40.0%
CCCTAATTTCCATGGAAACT+TGG - chr1_3:58011127-58011146 None:intergenic 40.0%
! TCCCGCTCATTTGCTTTATT+AGG - chr1_3:58011341-58011360 None:intergenic 40.0%
CGGTTATGGCCATTATTTGA+TGG + chr1_3:58011515-58011534 Msa0128350:intron 40.0%
TGGTTATAAATGTGACCGGA+TGG + chr1_3:58011814-58011833 Msa0128350:intron 40.0%
GGTACCATACCACCTATAAA+TGG - chr1_3:58012084-58012103 None:intergenic 40.0%
CATGACTCTGACATTGAGAA+GGG - chr1_3:58012861-58012880 None:intergenic 40.0%
TCATGACTCTGACATTGAGA+AGG - chr1_3:58012862-58012881 None:intergenic 40.0%
CACTTGAATCTGCAATAGTG+AGG + chr1_3:58013188-58013207 Msa0128350:intron 40.0%
TTGAATCTGCAATAGTGAGG+AGG + chr1_3:58013191-58013210 Msa0128350:intron 40.0%
TGAATCTGCAATAGTGAGGA+GGG + chr1_3:58013192-58013211 Msa0128350:intron 40.0%
!! TTTTTATGTAGGGCGCTAGA+AGG - chr1_3:58013570-58013589 None:intergenic 40.0%
GTACTGGACTTGAATCAATG+TGG - chr1_3:58013611-58013630 None:intergenic 40.0%
!! CATTGATTCAAGTCCAGTAC+AGG + chr1_3:58013611-58013630 Msa0128350:intron 40.0%
!!! TGCCGTTTTTTTTCCTGTAC+TGG - chr1_3:58013627-58013646 None:intergenic 40.0%
! TTAATGGATCAGTGGGTAGT+TGG + chr1_3:58014030-58014049 Msa0128350:intron 40.0%
ATGCAACAGATAAATGGGAG+TGG + chr1_3:58014144-58014163 Msa0128350:intron 40.0%
!! GGGAGTGGAATTTGTTAAGA+AGG + chr1_3:58014159-58014178 Msa0128350:intron 40.0%
AAAAAAAAAGGCCGGAGGAT+AGG + chr1_3:58014507-58014526 Msa0128350:intron 40.0%
CCGGAGGATAGGAATAAAAT+TGG + chr1_3:58014518-58014537 Msa0128350:intron 40.0%
!!! GTGCGATGCATTTTTTCAGA+TGG + chr1_3:58014540-58014559 Msa0128350:intron 40.0%
CCATTGGATCTTGCACATTT+AGG - chr1_3:58014905-58014924 None:intergenic 40.0%
CCTAAATGTGCAAGATCCAA+TGG + chr1_3:58014902-58014921 Msa0128350:intron 40.0%
AGAAAAGTGGAGGGAGAAAT+GGG + chr1_3:58014928-58014947 Msa0128350:intron 40.0%
AGAAATGGGGGGGAAATATT+AGG + chr1_3:58014942-58014961 Msa0128350:intron 40.0%
GAAATGGGGGGGAAATATTA+GGG + chr1_3:58014943-58014962 Msa0128350:intron 40.0%
!! ATTCCTATCCTCATTTTGGC+CGG - chr1_3:58015224-58015243 None:intergenic 40.0%
CCATTGGATCTTGCACATTT+AGG - chr1_3:58014905-58014924 None:intergenic 40.0%
CCTAAATGTGCAAGATCCAA+TGG + chr1_3:58014902-58014921 Msa0128350:intron 40.0%
CAAGCGGATAGGAATGAAAT+TGG + chr1_3:58016182-58016201 Msa0128350:intron 40.0%
! TCCCGCTCATTTGCTTTATT+AGG - chr1_3:58011341-58011360 None:intergenic 40.0%
ACCTAATGAAGCAAATGAGC+GGG + chr1_3:58016398-58016417 Msa0128350:intron 40.0%
! TCCCGCTCATTTGCTTTATT+AGG - chr1_3:58011341-58011360 None:intergenic 40.0%
! GAGATTTAAGGCGGTTTCTT+TGG + chr1_3:58016928-58016947 Msa0128350:intron 40.0%
CGAATTGAGAGACTGATAAG+AGG - chr1_3:58017396-58017415 None:intergenic 40.0%
! AATTTTAAGCAGTGCCTCAG+AGG + chr1_3:58017544-58017563 Msa0128350:intron 40.0%
!!! CCACTTTTGGTTTCCTTAAC+CGG - chr1_3:58017572-58017591 None:intergenic 40.0%
TGGTCGGATGAAATGATCAA+TGG - chr1_3:58017828-58017847 None:intergenic 40.0%
TCATTTCATCCGACCACTAA+TGG + chr1_3:58017832-58017851 Msa0128350:intron 40.0%
CATTTCATCCGACCACTAAT+GGG + chr1_3:58017833-58017852 Msa0128350:intron 40.0%
GTGTTGTGAGATGAATGACT+AGG - chr1_3:58018065-58018084 None:intergenic 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG - chr1_3:58018292-58018311 None:intergenic 40.0%
!! ACATTTATGTTGGGCTAGCT+AGG + chr1_3:58018336-58018355 Msa0128350:intron 40.0%
ATAATGAGTTTGATCGGCCT+AGG - chr1_3:58018364-58018383 None:intergenic 40.0%
GTAGAATACCCCGAATATCA+TGG - chr1_3:58019072-58019091 None:intergenic 40.0%
ATACACATAATCAGTTGCGG+AGG - chr1_3:58019218-58019237 None:intergenic 40.0%
TCCGCAACTGATTATGTGTA+TGG + chr1_3:58019217-58019236 Msa0128350:CDS 40.0%
AGTTTGGATTTCTCAACCTC+TGG - chr1_3:58019361-58019380 None:intergenic 40.0%
!!! CCGTAGTCTATTTTAGGTTG+GGG - chr1_3:58019532-58019551 None:intergenic 40.0%
CCCCAACCTAAAATAGACTA+CGG + chr1_3:58019529-58019548 Msa0128350:CDS 40.0%
!!! CCCGTAGTCTATTTTAGGTT+GGG - chr1_3:58019533-58019552 None:intergenic 40.0%
CCCAACCTAAAATAGACTAC+GGG + chr1_3:58019530-58019549 Msa0128350:CDS 40.0%
!! ACCCGTAGTCTATTTTAGGT+TGG - chr1_3:58019534-58019553 None:intergenic 40.0%
GAGTAAACTTCTTCGGACTT+AGG - chr1_3:58019583-58019602 None:intergenic 40.0%
!!! CTTCATAGTCTGGTTTTGTG+GGG - chr1_3:58019612-58019631 None:intergenic 40.0%
GACTTGGGTTTCTCAATCTT+GGG - chr1_3:58019673-58019692 None:intergenic 40.0%
!! GTTTGGTGTGTAAACAGCTT+CGG - chr1_3:58019695-58019714 None:intergenic 40.0%
!! CTTCATAGTCCAGTTTTGTG+GGG - chr1_3:58019717-58019736 None:intergenic 40.0%
! GCAGGGGCATATTCATAATT+TGG - chr1_3:58019754-58019773 None:intergenic 40.0%
! CTTTGGTTTCTCAATCTTGG+GGG - chr1_3:58019776-58019795 None:intergenic 40.0%
! GGACTTTGGTTTCTCAATCT+TGG - chr1_3:58019779-58019798 None:intergenic 40.0%
GTGTAAATTGCTTCGGACTT+TGG - chr1_3:58019793-58019812 None:intergenic 40.0%
!!! CTTCATAGTCTGGTTTTGTG+GGG - chr1_3:58019612-58019631 None:intergenic 40.0%
! ACTTTGGTTTCTCGATCTTG+GGG - chr1_3:58019882-58019901 None:intergenic 40.0%
! GACTTTGGTTTCTCGATCTT+GGG - chr1_3:58019883-58019902 None:intergenic 40.0%
! AGACTTTGGTTTCTCGATCT+TGG - chr1_3:58019884-58019903 None:intergenic 40.0%
! GGCATACCCATAATCAGTTT+TGG - chr1_3:58019959-58019978 None:intergenic 40.0%
!! ATTTTTCGATTTTGGGGGTC+GGG - chr1_3:58019981-58020000 None:intergenic 40.0%
!! GATTTTTCGATTTTGGGGGT+CGG - chr1_3:58019982-58020001 None:intergenic 40.0%
!!! TAGTTTGGTTTTGTGGGGTT+TGG - chr1_3:58020027-58020046 None:intergenic 40.0%
GGTTTGGGAACTTCATAGTT+TGG - chr1_3:58020042-58020061 None:intergenic 40.0%
! ACTTTGGTTTCTCGATCTTG+GGG - chr1_3:58019882-58019901 None:intergenic 40.0%
! GACTTTGGTTTCTCGATCTT+GGG - chr1_3:58019883-58019902 None:intergenic 40.0%
! AGACTTTGGTTTCTCGATCT+TGG - chr1_3:58019884-58019903 None:intergenic 40.0%
GTGTAAACTGCTTCAGACTT+TGG - chr1_3:58020108-58020127 None:intergenic 40.0%
!!! GGTTTCTCGATTTTTGGTGT+TGG - chr1_3:58020186-58020205 None:intergenic 40.0%
CCCACAATCATTAGTGTTCA+AGG + chr1_3:58020291-58020310 Msa0128350:CDS 40.0%
!!! GGAGTGGTTTTGTGTAAATC+TGG + chr1_3:58020312-58020331 Msa0128350:CDS 40.0%
ATCATGTGTGAGAAATGCAG+GGG + chr1_3:58020529-58020548 Msa0128350:intron 40.0%
TTCACATGTAACTCGTGCTA+CGG - chr1_3:58020555-58020574 None:intergenic 40.0%
TGTGAATGTGTGAATGAGCT+TGG + chr1_3:58020569-58020588 Msa0128350:CDS 40.0%
AATGAGCTTGGATATGAGAC+AGG + chr1_3:58020581-58020600 Msa0128350:CDS 40.0%
TATGAGACAGGTCCTATAAC+AGG + chr1_3:58020593-58020612 Msa0128350:CDS 40.0%
! TACATTGTCACTTGCAGAGT+TGG + chr1_3:58020655-58020674 Msa0128350:intron 40.0%
! ACATTGTCACTTGCAGAGTT+GGG + chr1_3:58020656-58020675 Msa0128350:intron 40.0%
TCTCTAATGGAGAACTCTCT+AGG - chr1_3:58020715-58020734 None:intergenic 40.0%
AGGTGCAATAGAGTACAATC+TGG - chr1_3:58020816-58020835 None:intergenic 40.0%
TGGACCATAATCAGTTGCAG+AGG - chr1_3:58008497-58008516 None:intergenic 45.0%
!! GGCTTCTCAATGTTTGGTGT+TGG - chr1_3:58008517-58008536 None:intergenic 45.0%
!! GGTTTCCCATTCTTTAGGGT+TGG - chr1_3:58008808-58008827 None:intergenic 45.0%
CGTTTGGGAACATCATTGTC+TGG - chr1_3:58008976-58008995 None:intergenic 45.0%
!! GGGTTCTCAATCTTTAGGGT+TGG - chr1_3:58009021-58009040 None:intergenic 45.0%
TGTAAACTGCTTCGGACTTG+GGG - chr1_3:58009041-58009060 None:intergenic 45.0%
GTATTCAGCCATGCAACAGA+TGG + chr1_3:58009551-58009570 Msa0128350:CDS 45.0%
AGCCATGCAACAGATGGTAA+AGG + chr1_3:58009557-58009576 Msa0128350:intron 45.0%
TTCCCACCAATGTGAACCAT+GGG + chr1_3:58009681-58009700 Msa0128350:CDS 45.0%
ATCCCATGGTTCACATTGGT+GGG - chr1_3:58009686-58009705 None:intergenic 45.0%
AATCCCATGGTTCACATTGG+TGG - chr1_3:58009687-58009706 None:intergenic 45.0%
CAGAATATGAGGGGTAACCT+TGG - chr1_3:58010644-58010663 None:intergenic 45.0%
TCCATGGAAATTAGGGTAGC+CGG + chr1_3:58011131-58011150 Msa0128350:intron 45.0%
GATCCAAAAACATACTCCCC+TGG + chr1_3:58011680-58011699 Msa0128350:intron 45.0%
!! TGACCAGGGGAGTATGTTTT+TGG - chr1_3:58011686-58011705 None:intergenic 45.0%
AAATATTCAAGACGACGGCG+AGG + chr1_3:58013451-58013470 Msa0128350:intron 45.0%
GTGCACGCCACTATTTATAC+CGG + chr1_3:58013879-58013898 Msa0128350:intron 45.0%
! ACTTGCTGCATGGAGAGATA+TGG + chr1_3:58013990-58014009 Msa0128350:intron 45.0%
ACTGTAGCGACAGATAAGAG+TGG + chr1_3:58014182-58014201 Msa0128350:intron 45.0%
! ATTCCTATCCTCCTTTTGGC+CGG - chr1_3:58014687-58014706 None:intergenic 45.0%
GATCCAATGGCTCAGAAAAG+TGG + chr1_3:58014915-58014934 Msa0128350:intron 45.0%
CAATGGCTCAGAAAAGTGGA+GGG + chr1_3:58014919-58014938 Msa0128350:intron 45.0%
CAGAAAAGTGGAGGGAGAAA+TGG + chr1_3:58014927-58014946 Msa0128350:intron 45.0%
GAAAAGTGGAGGGAGAAATG+GGG + chr1_3:58014929-58014948 Msa0128350:intron 45.0%
AAAAGTGGAGGGAGAAATGG+GGG + chr1_3:58014930-58014949 Msa0128350:intron 45.0%
TCCCGCTCATTTGCTTCATT+AGG - chr1_3:58016402-58016421 None:intergenic 45.0%
TTTCTTTGGCACAACTCCCT+TGG + chr1_3:58016942-58016961 Msa0128350:intron 45.0%
CCGGTTAAGGAAACCAAAAG+TGG + chr1_3:58017569-58017588 Msa0128350:intron 45.0%
TTAGCACTCCCATTAGTGGT+CGG - chr1_3:58017844-58017863 None:intergenic 45.0%
CATTGAGTCCCTCGATAAGA+TGG - chr1_3:58017893-58017912 None:intergenic 45.0%
ATACATGTTCGCCACTCACT+AGG + chr1_3:58018805-58018824 Msa0128350:intron 45.0%
GACTAGATCTACCTAGTGAG+TGG - chr1_3:58018819-58018838 None:intergenic 45.0%
AGATAATTGGTTGCACGTCG+TGG - chr1_3:58018974-58018993 None:intergenic 45.0%
CGACGTGCAACCAATTATCT+TGG + chr1_3:58018974-58018993 Msa0128350:intron 45.0%
AATGCTTCAAAGCAGTGGTG+AGG - chr1_3:58019094-58019113 None:intergenic 45.0%
TGGCTAGCAACGCAAAAAGA+AGG - chr1_3:58019192-58019211 None:intergenic 45.0%
ATAATCAGTTGCGGAGGCTA+TGG - chr1_3:58019212-58019231 None:intergenic 45.0%
GGTTCAGACTTCTCAGTGTT+TGG - chr1_3:58019250-58019269 None:intergenic 45.0%
TGAGTATAGTCCAACTCCAG+AGG + chr1_3:58019342-58019361 Msa0128350:CDS 45.0%
!! GATTTCTCAACCTCTGGAGT+TGG - chr1_3:58019355-58019374 None:intergenic 45.0%
! AGGTCTCTCTATCTCTGGAA+CGG - chr1_3:58019461-58019480 None:intergenic 45.0%
!! CTTCATAGTCTGGTTTGGTG+AGG - chr1_3:58019507-58019526 None:intergenic 45.0%
GGGAACTTCATAGTCTGGTT+TGG - chr1_3:58019512-58019531 None:intergenic 45.0%
GACTTAGGCTTCTCAACCTT+TGG - chr1_3:58019568-58019587 None:intergenic 45.0%
GGTTTGGGAACTTCATAGTC+TGG - chr1_3:58019622-58019641 None:intergenic 45.0%
GGACTTGGGTTTCTCAATCT+TGG - chr1_3:58019674-58019693 None:intergenic 45.0%
GTGTAAACAGCTTCGGACTT+GGG - chr1_3:58019688-58019707 None:intergenic 45.0%
TGTGTAAACAGCTTCGGACT+TGG - chr1_3:58019689-58019708 None:intergenic 45.0%
!! TAGTCCAGTTTTGTGGGGTT+TGG - chr1_3:58019712-58019731 None:intergenic 45.0%
!!! TAGTCTGGTTTTGTGGGGTT+TGG - chr1_3:58019607-58019626 None:intergenic 45.0%
GGTTTGGGAACTTCATAGTC+TGG - chr1_3:58019622-58019641 None:intergenic 45.0%
! CTTTGGTTTCTCGATCTTGG+GGG - chr1_3:58019881-58019900 None:intergenic 45.0%
!! TTTTTCGATTTTGGGGGTCG+GGG - chr1_3:58019980-58019999 None:intergenic 45.0%
TGTGTAGACTGCTTCAGACT+TGG - chr1_3:58020004-58020023 None:intergenic 45.0%
! CTTTGGTTTCTCGATCTTGG+GGG - chr1_3:58019881-58019900 None:intergenic 45.0%
ACTGATGCCATGGTTCACAT+CGG - chr1_3:58020753-58020772 None:intergenic 45.0%
CAAGCCAAACCAGTTCCTAA+TGG + chr1_3:58020851-58020870 Msa0128350:CDS 45.0%
!! AATTATTATAAAAGAAAATT+CGG + chr1_3:58011071-58011090 Msa0128350:intron 5.0%
!! ATATTATTTCAAAAATAAAA+AGG + chr1_3:58012801-58012820 Msa0128350:intron 5.0%
!! AACTATATAAAATTATAAAT+AGG - chr1_3:58012931-58012950 None:intergenic 5.0%
!!! ATTTATAATTTTATATAGTT+CGG + chr1_3:58012931-58012950 Msa0128350:intron 5.0%
!! AATTCAAAAAAATAATAATA+AGG + chr1_3:58014655-58014674 Msa0128350:intron 5.0%
!! GAATTTAAAAAATAATAATA+AGG + chr1_3:58015192-58015211 Msa0128350:intron 5.0%
AACTACTCCTTGGACGCCAA+TGG - chr1_3:58009241-58009260 None:intergenic 50.0%
GTTCCCACCAATGTGAACCA+TGG + chr1_3:58009680-58009699 Msa0128350:CDS 50.0%
TAAGGCGGAAGATCTTACGC+CGG - chr1_3:58010482-58010501 None:intergenic 50.0%
GTTGTCGTCATGTGACTGGA+AGG - chr1_3:58010608-58010627 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG + chr1_3:58010624-58010643 Msa0128350:intron 50.0%
TAATAAACCCGAGCGGAGCA+CGG - chr1_3:58010933-58010952 None:intergenic 50.0%
TCCGGCTACCCTAATTTCCA+TGG - chr1_3:58011135-58011154 None:intergenic 50.0%
TCTTCTTGGAAAGACCCGTG+CGG - chr1_3:58011400-58011419 None:intergenic 50.0%
ATCCTTGCTGCTCCTTGAGT+AGG + chr1_3:58013544-58013563 Msa0128350:intron 50.0%
GCTGCATGGAGAGATATGGA+AGG + chr1_3:58013994-58014013 Msa0128350:intron 50.0%
!! CCTCCACTTTTCTGAGCCAT+TGG - chr1_3:58014921-58014940 None:intergenic 50.0%
CCAATGGCTCAGAAAAGTGG+AGG + chr1_3:58014918-58014937 Msa0128350:intron 50.0%
AAAGTGGAGGGAGAAATGGG+GGG + chr1_3:58014931-58014950 Msa0128350:intron 50.0%
GCAATTCATGGTCGGTCCAA+GGG - chr1_3:58016961-58016980 None:intergenic 50.0%
TGCAATTCATGGTCGGTCCA+AGG - chr1_3:58016962-58016981 None:intergenic 50.0%
TTGACTCTTAACCAGTGCCC+CGG + chr1_3:58017671-58017690 Msa0128350:intron 50.0%
AAATGTTAACCAGTGCCCCG+GGG - chr1_3:58017691-58017710 None:intergenic 50.0%
GAAATGTTAACCAGTGCCCC+GGG - chr1_3:58017692-58017711 None:intergenic 50.0%
GGAAATGTTAACCAGTGCCC+CGG - chr1_3:58017693-58017712 None:intergenic 50.0%
GGAGGGGAGCTTTCATTGTT+TGG - chr1_3:58018919-58018938 None:intergenic 50.0%
!! GACTTCTCAGTGTTTGGTGC+TGG - chr1_3:58019244-58019263 None:intergenic 50.0%
!! GGTCTCTCTATCTCTGGAAC+GGG - chr1_3:58019460-58019479 None:intergenic 50.0%
GGTTCAGGTCTCTCTATCTC+TGG - chr1_3:58019466-58019485 None:intergenic 50.0%
GGTTGGGGAACTTCATAGTC+TGG - chr1_3:58019517-58019536 None:intergenic 50.0%
CGGGTATAGTCCAACTCCAA+AGG + chr1_3:58019549-58019568 Msa0128350:CDS 50.0%
!! GGCTTCTCAACCTTTGGAGT+TGG - chr1_3:58019562-58019581 None:intergenic 50.0%
GGTTTCTCAATCTTGGGAGC+CGG - chr1_3:58019667-58019686 None:intergenic 50.0%
CACACCAAACCCCACAAAAC+TGG + chr1_3:58019705-58019724 Msa0128350:CDS 50.0%
TTTCTCAATCTTGGGGGCAG+GGG - chr1_3:58019770-58019789 None:intergenic 50.0%
GTTTCTCAATCTTGGGGGCA+GGG - chr1_3:58019771-58019790 None:intergenic 50.0%
ATGCCATGGTTCACATCGGT+GGG - chr1_3:58020749-58020768 None:intergenic 50.0%
GATGTGAACCATGGCATCAG+TGG + chr1_3:58020752-58020771 Msa0128350:CDS 50.0%
AGGAGACGGTACGAAGAAAG+AGG - chr1_3:58020782-58020801 None:intergenic 50.0%
GCTTGCGAGGTGTAGAAGAA+AGG - chr1_3:58020836-58020855 None:intergenic 50.0%
CCTTGGACGCCAATGGATGT+AGG - chr1_3:58009234-58009253 None:intergenic 55.0%
CCTACATCCATTGGCGTCCA+AGG + chr1_3:58009231-58009250 Msa0128350:CDS 55.0%
! TTACCATGTGTGAGGGGTGC+AGG + chr1_3:58009464-58009483 Msa0128350:intron 55.0%
! TACCATGTGTGAGGGGTGCA+GGG + chr1_3:58009465-58009484 Msa0128350:intron 55.0%
!! GAGGAGCACCACTAATCCCA+TGG - chr1_3:58009700-58009719 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG - chr1_3:58010516-58010535 None:intergenic 55.0%
! TTTTTGACCCGTGCTCCGCT+CGG + chr1_3:58010922-58010941 Msa0128350:intron 55.0%
AATAAACCCGAGCGGAGCAC+GGG - chr1_3:58010932-58010951 None:intergenic 55.0%
ACGACGGCGAGGTAAACAGT+AGG + chr1_3:58013462-58013481 Msa0128350:intron 55.0%
GTAAACAGTAGGAGCAGCGC+TGG + chr1_3:58013473-58013492 Msa0128350:intron 55.0%
GTGGCGTGCACATACCTTTG+TGG - chr1_3:58013870-58013889 None:intergenic 55.0%
GGAGTTGGAGAGACTTCTCG+TGG + chr1_3:58013956-58013975 Msa0128350:intron 55.0%
TGGATCAGTGGGTAGTTGGC+AGG + chr1_3:58014034-58014053 Msa0128350:intron 55.0%
TAAGGATTCGGCCGGCCAAA+AGG + chr1_3:58014673-58014692 Msa0128350:intron 55.0%
AAGTGGAGGGAGAAATGGGG+GGG + chr1_3:58014932-58014951 Msa0128350:intron 55.0%
TTCCTTAACCGGTGCCTCTG+AGG - chr1_3:58017561-58017580 None:intergenic 55.0%
TGACTCTTAACCAGTGCCCC+GGG + chr1_3:58017672-58017691 Msa0128350:intron 55.0%
GGTTTCTCAATCTTGGGGGC+AGG - chr1_3:58019772-58019791 None:intergenic 55.0%
TTTCTCGATCTTGGGGGCTG+GGG - chr1_3:58019875-58019894 None:intergenic 55.0%
GTTTCTCGATCTTGGGGGCT+GGG - chr1_3:58019876-58019895 None:intergenic 55.0%
GTTCCCACCGATGTGAACCA+TGG + chr1_3:58020743-58020762 Msa0128350:CDS 55.0%
GATGCCATGGTTCACATCGG+TGG - chr1_3:58020750-58020769 None:intergenic 55.0%
!! AGGAACTGGTTTGGCTTGCG+AGG - chr1_3:58020849-58020868 None:intergenic 55.0%
! ACCATGTGTGAGGGGTGCAG+GGG + chr1_3:58009466-58009485 Msa0128350:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG - chr1_3:58010515-58010534 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - chr1_3:58010635-58010654 None:intergenic 60.0%
! TTTTGACCCGTGCTCCGCTC+GGG + chr1_3:58010923-58010942 Msa0128350:intron 60.0%
TCTTGACCCGTGCTACCGCA+CGG + chr1_3:58011382-58011401 Msa0128350:intron 60.0%
AAAGACCCGTGCGGTAGCAC+GGG - chr1_3:58011391-58011410 None:intergenic 60.0%
GAAAGACCCGTGCGGTAGCA+CGG - chr1_3:58011392-58011411 None:intergenic 60.0%
GGCCTACTCAAGGAGCAGCA+AGG - chr1_3:58013549-58013568 None:intergenic 60.0%
GGCGCTAGAAGGCCTACTCA+AGG - chr1_3:58013559-58013578 None:intergenic 60.0%
GGATTCGGCCGGCCAAAATG+AGG + chr1_3:58015213-58015232 Msa0128350:intron 60.0%
CGGCCGGCCAAAATGAGGAT+AGG + chr1_3:58015218-58015237 Msa0128350:intron 60.0%
! AAGCAGTGCCTCAGAGGCAC+CGG + chr1_3:58017550-58017569 Msa0128350:intron 60.0%
!! TGCCTCAGAGGCACCGGTTA+AGG + chr1_3:58017556-58017575 Msa0128350:intron 60.0%
GACTCTTAACCAGTGCCCCG+GGG + chr1_3:58017673-58017692 Msa0128350:intron 60.0%
GGTTTCTCGATCTTGGGGGC+TGG - chr1_3:58019877-58019896 None:intergenic 60.0%
GGTTTCTCGATCTTGGGGGC+TGG - chr1_3:58019877-58019896 None:intergenic 60.0%
!! GAGGAGCACCACTGATGCCA+TGG - chr1_3:58020763-58020782 None:intergenic 60.0%
CTTGACCCGTGCTACCGCAC+GGG + chr1_3:58011383-58011402 Msa0128350:intron 65.0%
GGATTCGGCCGGCCAAAAGG+AGG + chr1_3:58014676-58014695 Msa0128350:intron 65.0%
CGGCCGGCCAAAAGGAGGAT+AGG + chr1_3:58014681-58014700 Msa0128350:intron 65.0%
!! GTTGGGCTAGCTAGGCGCCT+AGG + chr1_3:58018344-58018363 Msa0128350:intron 65.0%
GCCCCTGCACCCCTCACACA+TGG - chr1_3:58009470-58009489 None:intergenic 70.0%
! TGTGAGGGGTGCAGGGGCTG+TGG + chr1_3:58009472-58009491 Msa0128350:intron 70.0%
TAACCAGTGCCCCGGGGCAC+TGG + chr1_3:58017679-58017698 Msa0128350:intron 70.0%
TAACCAGTGCCCCGGGGCAC+TGG - chr1_3:58017679-58017698 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 58008433 58020976 58008433 ID=Msa0128350;Name=Msa0128350
chr1_3 mRNA 58008433 58020976 58008433 ID=Msa0128350-mRNA-1;Parent=Msa0128350;Name=Msa0128350-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|0.88|0.25|0|9|0|861
chr1_3 exon 58008433 58008592 58008433 ID=Msa0128350-mRNA-1:exon:18600;Parent=Msa0128350-mRNA-1
chr1_3 exon 58008611 58009297 58008611 ID=Msa0128350-mRNA-1:exon:18601;Parent=Msa0128350-mRNA-1
chr1_3 exon 58009486 58009572 58009486 ID=Msa0128350-mRNA-1:exon:18602;Parent=Msa0128350-mRNA-1
chr1_3 exon 58009579 58009809 58009579 ID=Msa0128350-mRNA-1:exon:18603;Parent=Msa0128350-mRNA-1
chr1_3 exon 58019209 58019438 58019209 ID=Msa0128350-mRNA-1:exon:18604;Parent=Msa0128350-mRNA-1
chr1_3 exon 58019469 58020357 58019469 ID=Msa0128350-mRNA-1:exon:18605;Parent=Msa0128350-mRNA-1
chr1_3 exon 58020549 58020641 58020549 ID=Msa0128350-mRNA-1:exon:18606;Parent=Msa0128350-mRNA-1
chr1_3 exon 58020672 58020872 58020672 ID=Msa0128350-mRNA-1:exon:18607;Parent=Msa0128350-mRNA-1
chr1_3 exon 58020972 58020976 58020972 ID=Msa0128350-mRNA-1:exon:18608;Parent=Msa0128350-mRNA-1
chr1_3 CDS 58008433 58008592 58008433 ID=Msa0128350-mRNA-1:cds;Parent=Msa0128350-mRNA-1
chr1_3 CDS 58008611 58009297 58008611 ID=Msa0128350-mRNA-1:cds;Parent=Msa0128350-mRNA-1
chr1_3 CDS 58009486 58009572 58009486 ID=Msa0128350-mRNA-1:cds;Parent=Msa0128350-mRNA-1
chr1_3 CDS 58009579 58009809 58009579 ID=Msa0128350-mRNA-1:cds;Parent=Msa0128350-mRNA-1
chr1_3 CDS 58019209 58019438 58019209 ID=Msa0128350-mRNA-1:cds;Parent=Msa0128350-mRNA-1
chr1_3 CDS 58019469 58020357 58019469 ID=Msa0128350-mRNA-1:cds;Parent=Msa0128350-mRNA-1
chr1_3 CDS 58020549 58020641 58020549 ID=Msa0128350-mRNA-1:cds;Parent=Msa0128350-mRNA-1
chr1_3 CDS 58020672 58020872 58020672 ID=Msa0128350-mRNA-1:cds;Parent=Msa0128350-mRNA-1
chr1_3 CDS 58020972 58020976 58020972 ID=Msa0128350-mRNA-1:cds;Parent=Msa0128350-mRNA-1
Gene Sequence

>Msa0128350

ATGGCTTATCTTAGATCCATCTTCACCACCTTTATTCTTCTTTTTTCATTGCTAGTTATTGCCTCTGCAACTGATTATGGTCCAACACCAAACATTGAGAAGCCTAAAACTGAAGTAGATAACAAACCATATTCTACAAAACCAAACTATGATAAATATGAGAAATTTGAACTTGAGACAGATTCCAATCAACATCTCAAAAATTCAAACGATGAAAATCCTAAACCTGAAACAAATTATGGGTATGGTCCATCACCAAAGATTGAGAAACCTATATCGGAAGCAGTCTACAAACTAAACCAAACAAAATCAAACAACGAAGTTCCCAAACCCAAAACTCATTTTGCTTATAGTCCAACCCTAAAGAATGGGAAACCCAAATCCGATGCAGTTTACACAACAAACACCACAAACTCATATTATGAAGTTCCAAAACCCAAAAATGATTATGGATATGTTCAAACCCCAGAAAAAATTGAGAAACCTAAGTCCGAAGTAGTTTACACACCAAATACCACAAACCCAGACAATGATGTTCCCAAACGTAAAACAAATTATGGATATGGTCCAACCCTAAAGATTGAGAACCCCAAGTCCGAAGCAGTTTACAAATCAAACCTCACAAAGTCGGACTATAAATTGCCAAAACCTAAAAAAAATTACGGGTATGCTCCAACTCCAAAGATCGAGAAATCCAAACTTGAAGCGGATTATAATTTACACCCCACAAAACAAGATTATGAAGTTCTCAAAACAAAAGAAAACTACAAAGTGCAAATTCCTACATCCATTGGCGTCCAAGGAGTAGTTTTCTGTAAATCAGGCTCAAATTATTACCCAATTCAAGGGGCTGTGGCACGAGTTACATGTAGATGTGTGAATGAGCTTGGAAATGAGACAAACCCTATATCAGTATTCAGCCATGCAACAGATGGTTATTACTTTGCTACACTGTCACATTCAAAGCTTGGATCAAAATTGAAGATCAATGAGTGCAAAGCATACCTAGAGAGTTCTCCATTAAATATTTGTAAAGTTCCCACCAATGTGAACCATGGGATTAGTGGTGCTCCTCTTTCTTCTTATCGTAATCTTGAAAACAATTTTAAATTATACTCTTTACCACCTTTCTTCTACACTTCTCAAGCTAAACCAATCCATAATGCCATAGCCTCCGCAACTGATTATGTGTATGGTCCAGCACCAAACACTGAGAAGTCTGAACCCCAAACTGAAGTAGATAAGAAGTCATACTCTACAAAATCAGACTATGAAGTTTCCAAATCCAAAACAAATTATGAGTATAGTCCAACTCCAGAGGTTGAGAAATCCAAACTCGATATAGATTACGAAGTACATTTAATAAAACCAAACTATAAAGTTCCCAAACCCAAAATAGAGAGACCTGAACCCGAAACATATTACAAACACCTCACCAAACCAGACTATGAAGTTCCCCAACCTAAAATAGACTACGGGTATAGTCCAACTCCAAAGGTTGAGAAGCCTAAGTCCGAAGAAGTTTACTCATCAAACCCCACAAAACCAGACTATGAAGTTCCCAAACCCAAAATAGATTATGGCTATGCACCGGCTCCCAAGATTGAGAAACCCAAGTCCGAAGCTGTTTACACACCAAACCCCACAAAACTGGACTATGAAGTTCCCAAATCTAAACCAAATTATGAATATGCCCCTGCCCCCAAGATTGAGAAACCAAAGTCCGAAGCAATTTACACACCAAACCCCACAAAACCAGACTATGAAGTTCCCAAACCCAAAACAGATTATGAGTATGCCCCAGCCCCCAAGATCGAGAAACCAAAGTCTGAAGTAGTTTACACACAAAACCCCACAAAACCTGACTATAAAGTTCCCAAATCCAAAACTGATTATGGGTATGCCCCGACCCCCAAAATCGAAAAATCCAAGTCTGAAGCAGTCTACACACCAAACCCCACAAAACCAAACTATGAAGTTCCCAAACCCAAAATAGATTATGAGTATGCACCAGCCCCCAAGATCGAGAAACCAAAGTCTGAAGCAGTTTACACACCAAAATCCACAAAACCAGACTATGAAATTCCCAAATCAAATTATGATTATTCCCCAACACCAAAAATCGAGAAACCCAAACTTGATACAGATTATAAACTACTCCCCACAAAACCAGATTATGAAGTTCCAAAACCAAAAGAAAACTACGAAGTGCAACTGCCCACAATCATTAGTGTTCAAGGAGTGGTTTTGTGTAAATCTGGCTCTAATTATTATCCAATTCAAGGGGCCGTAGCACGAGTTACATGTGAATGTGTGAATGAGCTTGGATATGAGACAGGTCCTATAACAGGATTGAGACATGTAACAGATAGTAAAGAGTTGGGATCAAAATTGAAGATTAACGAATGCAAAGCATACCTAGAGAGTTCTCCATTAGAGACATGTAAAGTTCCCACCGATGTGAACCATGGCATCAGTGGTGCTCCTCTTTCTTCGTACCGTCTCCTTGAAAACAATTCCAGATTGTACTCTATTGCACCTTTCTTCTACACCTCGCAAGCCAAACCAGTTCCTAATGTTTGT
Protein sequence

>Msa0128350

MAYLRSIFTTFILLFSLLVIASATDYGPTPNIEKPKTEVDNKPYSTKPNYDKYEKFELETDSNQHLKNSNDENPKPETNYGYGPSPKIEKPISEAVYKLNQTKSNNEVPKPKTHFAYSPTLKNGKPKSDAVYTTNTTNSYYEVPKPKNDYGYVQTPEKIEKPKSEVVYTPNTTNPDNDVPKRKTNYGYGPTLKIENPKSEAVYKSNLTKSDYKLPKPKKNYGYAPTPKIEKSKLEADYNLHPTKQDYEVLKTKENYKVQIPTSIGVQGVVFCKSGSNYYPIQGAVARVTCRCVNELGNETNPISVFSHATDGYYFATLSHSKLGSKLKINECKAYLESSPLNICKVPTNVNHGISGAPLSSYRNLENNFKLYSLPPFFYTSQAKPIHNAIASATDYVYGPAPNTEKSEPQTEVDKKSYSTKSDYEVSKSKTNYEYSPTPEVEKSKLDIDYEVHLIKPNYKVPKPKIERPEPETYYKHLTKPDYEVPQPKIDYGYSPTPKVEKPKSEEVYSSNPTKPDYEVPKPKIDYGYAPAPKIEKPKSEAVYTPNPTKLDYEVPKSKPNYEYAPAPKIEKPKSEAIYTPNPTKPDYEVPKPKTDYEYAPAPKIEKPKSEVVYTQNPTKPDYKVPKSKTDYGYAPTPKIEKSKSEAVYTPNPTKPNYEVPKPKIDYEYAPAPKIEKPKSEAVYTPKSTKPDYEIPKSNYDYSPTPKIEKPKLDTDYKLLPTKPDYEVPKPKENYEVQLPTIISVQGVVLCKSGSNYYPIQGAVARVTCECVNELGYETGPITGLRHVTDSKELGSKLKINECKAYLESSPLETCKVPTDVNHGISGAPLSSYRLLENNSRLYSIAPFFYTSQAKPVPNVC