Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0946310 | sp|Q9SSK5|MLP43_ARATH | 34.000 | 150 | 96 | 3 | 3 | 150 | 7 | 155 | 3.13e-26 | 100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0946310 | A0A072U0G0 | 92.105 | 152 | 12 | 0 | 1 | 152 | 1 | 152 | 6.03e-100 | 293 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000370 | Msa0946310 | 0.810475 | 1.131647e-50 | -8.615850e-47 |
| Msa0006080 | Msa0946310 | 0.816758 | 4.688924e-52 | -8.615850e-47 |
| Msa0010150 | Msa0946310 | 0.823415 | 1.402215e-53 | -8.615850e-47 |
| Msa0013270 | Msa0946310 | 0.814632 | 1.395387e-51 | -8.615850e-47 |
| Msa0045810 | Msa0946310 | 0.808485 | 3.026985e-50 | -8.615850e-47 |
| Msa0046200 | Msa0946310 | 0.802753 | 4.830184e-49 | -8.615850e-47 |
| Msa0084150 | Msa0946310 | 0.806598 | 7.610320e-50 | -8.615850e-47 |
| Msa0096590 | Msa0946310 | 0.812073 | 5.092676e-51 | -8.615850e-47 |
| Msa0609460 | Msa0946310 | 0.806028 | 1.003521e-49 | -8.615850e-47 |
| Msa0618680 | Msa0946310 | 0.801619 | 8.266038e-49 | -8.615850e-47 |
| Msa0622880 | Msa0946310 | 0.812556 | 3.995843e-51 | -8.615850e-47 |
| Msa0623250 | Msa0946310 | 0.809908 | 1.499610e-50 | -8.615850e-47 |
| Msa0631700 | Msa0946310 | 0.809995 | 1.436220e-50 | -8.615850e-47 |
| Msa0643190 | Msa0946310 | 0.804580 | 2.017395e-49 | -8.615850e-47 |
| Msa0643840 | Msa0946310 | 0.800879 | 1.171392e-48 | -8.615850e-47 |
| Msa0645370 | Msa0946310 | 0.803861 | 2.847446e-49 | -8.615850e-47 |
| Msa0667600 | Msa0946310 | 0.822528 | 2.257585e-53 | -8.615850e-47 |
| Msa0670360 | Msa0946310 | 0.808061 | 3.727394e-50 | -8.615850e-47 |
| Msa0692090 | Msa0946310 | 0.812996 | 3.200832e-51 | -8.615850e-47 |
| Msa0715250 | Msa0946310 | 0.800776 | 1.229864e-48 | -8.615850e-47 |
| Msa0716980 | Msa0946310 | 0.812090 | 5.050972e-51 | -8.615850e-47 |
| Msa0768670 | Msa0946310 | 0.810175 | 1.313446e-50 | -8.615850e-47 |
| Msa0768720 | Msa0946310 | 0.802212 | 6.243529e-49 | -8.615850e-47 |
| Msa0777250 | Msa0946310 | 0.811657 | 6.273961e-51 | -8.615850e-47 |
| Msa0777260 | Msa0946310 | 0.817365 | 3.424198e-52 | -8.615850e-47 |
| Msa0782590 | Msa0946310 | 0.815483 | 9.032091e-52 | -8.615850e-47 |
| Msa0804170 | Msa0946310 | 0.814160 | 1.774385e-51 | -8.615850e-47 |
| Msa0814230 | Msa0946310 | 0.814575 | 1.436621e-51 | -8.615850e-47 |
| Msa0817690 | Msa0946310 | 0.806821 | 6.828302e-50 | -8.615850e-47 |
| Msa0128350 | Msa0946310 | 0.812820 | 3.498358e-51 | -8.615850e-47 |
| Msa0147680 | Msa0946310 | 0.815686 | 8.142485e-52 | -8.615850e-47 |
| Msa0150910 | Msa0946310 | 0.815657 | 8.262895e-52 | -8.615850e-47 |
| Msa0150920 | Msa0946310 | 0.800134 | 1.662041e-48 | -8.615850e-47 |
| Msa0185690 | Msa0946310 | 0.802391 | 5.737035e-49 | -8.615850e-47 |
| Msa0190890 | Msa0946310 | 0.807727 | 4.389549e-50 | -8.615850e-47 |
| Msa0195580 | Msa0946310 | 0.816628 | 5.014787e-52 | -8.615850e-47 |
| Msa0206370 | Msa0946310 | 0.812156 | 4.884432e-51 | -8.615850e-47 |
| Msa0209060 | Msa0946310 | 0.806291 | 8.833829e-50 | -8.615850e-47 |
| Msa0219800 | Msa0946310 | 0.818524 | 1.873907e-52 | -8.615850e-47 |
| Msa0220090 | Msa0946310 | 0.811414 | 7.085986e-51 | -8.615850e-47 |
| Msa0366510 | Msa0946310 | 0.803203 | 3.898518e-49 | -8.615850e-47 |
| Msa0374040 | Msa0946310 | 0.820842 | 5.537885e-53 | -8.615850e-47 |
| Msa0374470 | Msa0946310 | 0.801723 | 7.870162e-49 | -8.615850e-47 |
| Msa0375860 | Msa0946310 | 0.808458 | 3.066163e-50 | -8.615850e-47 |
| Msa0380680 | Msa0946310 | 0.810073 | 1.381903e-50 | -8.615850e-47 |
| Msa0386910 | Msa0946310 | 0.836031 | 1.187732e-56 | -8.615850e-47 |
| Msa0396860 | Msa0946310 | 0.811634 | 6.347262e-51 | -8.615850e-47 |
| Msa0419570 | Msa0946310 | 0.802314 | 5.949901e-49 | -8.615850e-47 |
| Msa0423220 | Msa0946310 | 0.803019 | 4.256221e-49 | -8.615850e-47 |
| Msa0439000 | Msa0946310 | 0.804388 | 2.213120e-49 | -8.615850e-47 |
| Msa0472390 | Msa0946310 | 0.837987 | 3.757375e-57 | -8.615850e-47 |
| Msa0251120 | Msa0946310 | 0.811743 | 6.011165e-51 | -8.615850e-47 |
| Msa0253450 | Msa0946310 | 0.809939 | 1.476829e-50 | -8.615850e-47 |
| Msa0261400 | Msa0946310 | 0.832616 | 8.540740e-56 | -8.615850e-47 |
| Msa0278940 | Msa0946310 | 0.806004 | 1.015039e-49 | -8.615850e-47 |
| Msa0288540 | Msa0946310 | 0.811068 | 8.422187e-51 | -8.615850e-47 |
| Msa0299030 | Msa0946310 | 0.817802 | 2.729556e-52 | -8.615850e-47 |
| Msa0326770 | Msa0946310 | 0.829323 | 5.488372e-55 | -8.615850e-47 |
| Msa0328100 | Msa0946310 | 0.803368 | 3.603847e-49 | -8.615850e-47 |
| Msa0349910 | Msa0946310 | 0.800526 | 1.382807e-48 | -8.615850e-47 |
| Msa0349930 | Msa0946310 | 0.844722 | 6.338614e-59 | -8.615850e-47 |
| Msa0496380 | Msa0946310 | 0.800868 | 1.177825e-48 | -8.615850e-47 |
| Msa0515130 | Msa0946310 | 0.805401 | 1.359149e-49 | -8.615850e-47 |
| Msa0523720 | Msa0946310 | 0.838855 | 2.244336e-57 | -8.615850e-47 |
| Msa0535570 | Msa0946310 | 0.826965 | 2.030051e-54 | -8.615850e-47 |
| Msa0549170 | Msa0946310 | 0.813262 | 2.797773e-51 | -8.615850e-47 |
| Msa0556720 | Msa0946310 | 0.805110 | 1.563675e-49 | -8.615850e-47 |
| Msa0565700 | Msa0946310 | 0.807677 | 4.497894e-50 | -8.615850e-47 |
| Msa0574320 | Msa0946310 | 0.801209 | 1.003206e-48 | -8.615850e-47 |
| Msa0591490 | Msa0946310 | 0.818260 | 2.150902e-52 | -8.615850e-47 |
| Msa0602050 | Msa0946310 | 0.816974 | 4.193450e-52 | -8.615850e-47 |
| Msa0861730 | Msa0946310 | 0.812974 | 3.235810e-51 | -8.615850e-47 |
| Msa0880910 | Msa0946310 | 0.819813 | 9.537736e-53 | -8.615850e-47 |
| Msa0893840 | Msa0946310 | 0.840071 | 1.084372e-57 | -8.615850e-47 |
| Msa0910890 | Msa0946310 | 0.808004 | 3.831749e-50 | -8.615850e-47 |
| Msa0913550 | Msa0946310 | 0.856492 | 3.101706e-62 | -8.615850e-47 |
| Msa0932140 | Msa0946310 | 0.826080 | 3.300409e-54 | -8.615850e-47 |
| Msa0932150 | Msa0946310 | 0.808302 | 3.310634e-50 | -8.615850e-47 |
| Msa0946010 | Msa0946310 | 0.815592 | 8.544376e-52 | -8.615850e-47 |
| Msa0946310 | Msa0951150 | 0.844554 | 7.035402e-59 | -8.615850e-47 |
| Msa0946310 | Msa0967780 | 0.808218 | 3.450583e-50 | -8.615850e-47 |
| Msa0946310 | Msa0970270 | 0.802923 | 4.456002e-49 | -8.615850e-47 |
| Msa0946310 | Msa0987640 | 0.830619 | 2.651623e-55 | -8.615850e-47 |
| Msa0946310 | Msa0989480 | 0.820595 | 6.313040e-53 | -8.615850e-47 |
| Msa0946310 | Msa1015560 | 0.840776 | 7.091882e-58 | -8.615850e-47 |
| Msa0946310 | Msa1021620 | 0.815193 | 1.047920e-51 | -8.615850e-47 |
| Msa0946310 | Msa1029820 | 0.804867 | 1.757806e-49 | -8.615850e-47 |
| Msa0946310 | Msa1030320 | 0.830359 | 3.070903e-55 | -8.615850e-47 |
| Msa0946310 | Msa1049400 | 0.805320 | 1.412925e-49 | -8.615850e-47 |
| Msa0946310 | Msa1061670 | 0.805278 | 1.442170e-49 | -8.615850e-47 |
| Msa0946310 | Msa1068940 | 0.802810 | 4.701734e-49 | -8.615850e-47 |
| Msa0946310 | Msa1069350 | 0.835301 | 1.817110e-56 | -8.615850e-47 |
| Msa0946310 | Msa1106960 | 0.802866 | 4.577080e-49 | -8.615850e-47 |
| Msa0946310 | Msa1108560 | 0.806350 | 8.585812e-50 | -8.615850e-47 |
| Msa0946310 | Msa1147010 | 0.807407 | 5.131698e-50 | -8.615850e-47 |
| Msa0946310 | Msa1157210 | 0.838132 | 3.448251e-57 | -8.615850e-47 |
| Msa0946310 | Msa1164690 | 0.803393 | 3.561347e-49 | -8.615850e-47 |
| Msa0946310 | Msa1170320 | 0.807857 | 4.117702e-50 | -8.615850e-47 |
| Msa0946310 | Msa1181090 | 0.810204 | 1.294772e-50 | -8.615850e-47 |
| Msa0946310 | Msa1206920 | 0.819978 | 8.742219e-53 | -8.615850e-47 |
| Msa0946310 | Msa1217890 | 0.817657 | 2.943235e-52 | -8.615850e-47 |
| Msa0946310 | Msa1220720 | 0.812311 | 4.518691e-51 | -8.615850e-47 |
| Msa0946310 | Msa1256990 | 0.809822 | 1.565011e-50 | -8.615850e-47 |
| Msa0946310 | Msa1257200 | 0.824987 | 5.991986e-54 | -8.615850e-47 |
| Msa0946310 | Msa1265570 | 0.812257 | 4.643915e-51 | -8.615850e-47 |
| Msa0946310 | Msa1297850 | 0.805073 | 1.591733e-49 | -8.615850e-47 |
| Msa0946310 | Msa1300590 | 0.823230 | 1.549016e-53 | -8.615850e-47 |
| Msa0946310 | Msa1322500 | 0.810723 | 1.000086e-50 | -8.615850e-47 |
| Msa0946310 | Msa1322990 | 0.865509 | 5.609048e-65 | -8.615850e-47 |
| Msa0946310 | Msa1323080 | 0.974068 | 1.650695e-137 | -8.615850e-47 |
| Msa0946310 | Msa1328280 | 0.804776 | 1.836513e-49 | -8.615850e-47 |
| Msa0946310 | Msa1334670 | 0.812990 | 3.210114e-51 | -8.615850e-47 |
| Msa0946310 | Msa1343590 | 0.823876 | 1.093915e-53 | -8.615850e-47 |
| Msa0946310 | Msa1357860 | 0.802920 | 4.461729e-49 | -8.615850e-47 |
| Msa0946310 | Msa1365230 | 0.813253 | 2.810552e-51 | -8.615850e-47 |
| Msa0946310 | Msa1368420 | 0.830249 | 3.266785e-55 | -8.615850e-47 |
| Msa0946310 | Msa1376070 | 0.807095 | 5.976311e-50 | -8.615850e-47 |
| Msa0946310 | Msa1377200 | 0.813776 | 2.156885e-51 | -8.615850e-47 |
| Msa0946310 | Msa1383220 | 0.829394 | 5.276700e-55 | -8.615850e-47 |
| Msa0946310 | Msa1407670 | 0.817994 | 2.470126e-52 | -8.615850e-47 |
| Msa0946310 | Msa1409600 | 0.817550 | 3.111562e-52 | -8.615850e-47 |
| Msa0946310 | Msa1413020 | 0.815039 | 1.133629e-51 | -8.615850e-47 |
| Msa0946310 | Msa1431160 | 0.803364 | 3.611171e-49 | -8.615850e-47 |
| Msa0946310 | Msa1438510 | 0.805645 | 1.207798e-49 | -8.615850e-47 |
| Msa0946310 | Msa1445890 | 0.820249 | 7.579199e-53 | -8.615850e-47 |
| Msa0946310 | Msa1445900 | 0.807552 | 4.781165e-50 | -8.615850e-47 |
| Msa0946310 | Msa1447790 | 0.804754 | 1.855932e-49 | -8.615850e-47 |
| Msa0946310 | Msa1449770 | 0.821389 | 4.143160e-53 | -8.615850e-47 |
| Msa0946310 | Msa1459610 | 0.808534 | 2.954241e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0946310 | MtrunA17_Chr8g0355761 | 92.105 | 152 | 12 | 0 | 1 | 152 | 1 | 152 | 1.16e-103 | 293 |
| Msa0946310 | MtrunA17_Chr8g0355741 | 72.848 | 151 | 41 | 0 | 1 | 151 | 1 | 151 | 7.59e-85 | 245 |
| Msa0946310 | MtrunA17_Chr8g0355781 | 71.053 | 152 | 44 | 0 | 1 | 152 | 1 | 152 | 6.70e-82 | 238 |
| Msa0946310 | MtrunA17_Chr8g0355721 | 71.711 | 152 | 43 | 0 | 1 | 152 | 1 | 152 | 1.78e-81 | 237 |
| Msa0946310 | MtrunA17_Chr8g0355661 | 69.737 | 152 | 45 | 1 | 1 | 152 | 1 | 151 | 2.47e-78 | 229 |
| Msa0946310 | MtrunA17_Chr8g0355811 | 67.763 | 152 | 48 | 1 | 1 | 152 | 1 | 151 | 5.26e-77 | 226 |
| Msa0946310 | MtrunA17_Chr8g0355641 | 65.563 | 151 | 52 | 0 | 1 | 151 | 1 | 151 | 1.32e-76 | 224 |
| Msa0946310 | MtrunA17_Chr8g0355821 | 65.132 | 152 | 52 | 1 | 1 | 152 | 1 | 151 | 1.06e-73 | 217 |
| Msa0946310 | MtrunA17_Chr8g0355801 | 65.132 | 152 | 52 | 1 | 1 | 152 | 1 | 151 | 3.09e-73 | 216 |
| Msa0946310 | MtrunA17_Chr8g0355791 | 65.132 | 152 | 52 | 1 | 1 | 152 | 1 | 151 | 1.69e-72 | 214 |
| Msa0946310 | MtrunA17_Chr8g0355771 | 63.816 | 152 | 54 | 1 | 1 | 152 | 1 | 151 | 1.90e-70 | 209 |
| Msa0946310 | MtrunA17_Chr1g0160371 | 43.137 | 153 | 84 | 2 | 1 | 151 | 1 | 152 | 2.09e-41 | 135 |
| Msa0946310 | MtrunA17_Chr1g0160381 | 37.255 | 153 | 93 | 2 | 1 | 151 | 5 | 156 | 1.09e-37 | 126 |
| Msa0946310 | MtrunA17_Chr1g0160391 | 39.103 | 156 | 87 | 4 | 1 | 149 | 1 | 155 | 1.02e-32 | 114 |
| Msa0946310 | MtrunA17_Chr1g0160801 | 35.811 | 148 | 86 | 4 | 7 | 152 | 7 | 147 | 8.04e-28 | 100 |
| Msa0946310 | MtrunA17_Chr8g0339261 | 33.103 | 145 | 94 | 3 | 6 | 149 | 8 | 150 | 2.74e-26 | 97.1 |
| Msa0946310 | MtrunA17_Chr1g0160351 | 41.935 | 93 | 52 | 1 | 61 | 151 | 1 | 93 | 6.34e-25 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0946310 | AT1G70890.1 | 34.000 | 150 | 96 | 3 | 3 | 150 | 7 | 155 | 3.18e-27 | 100 |
| Msa0946310 | AT5G28010.1 | 34.000 | 150 | 96 | 3 | 3 | 150 | 15 | 163 | 1.24e-26 | 98.6 |
| Msa0946310 | AT5G28010.2 | 34.000 | 150 | 96 | 3 | 3 | 150 | 15 | 163 | 1.24e-26 | 98.6 |
| Msa0946310 | AT1G70840.1 | 32.667 | 150 | 98 | 3 | 3 | 150 | 20 | 168 | 1.51e-26 | 98.6 |
| Msa0946310 | AT1G70830.5 | 34.667 | 150 | 95 | 3 | 3 | 150 | 22 | 170 | 2.08e-26 | 98.2 |
| Msa0946310 | AT1G70830.3 | 34.667 | 150 | 95 | 3 | 3 | 150 | 22 | 170 | 3.58e-26 | 98.6 |
| Msa0946310 | AT1G70830.2 | 34.667 | 150 | 95 | 3 | 3 | 150 | 22 | 170 | 1.33e-25 | 98.2 |
| Msa0946310 | AT1G70830.1 | 34.667 | 150 | 95 | 3 | 3 | 150 | 22 | 170 | 4.34e-25 | 98.6 |
| Msa0946310 | AT1G70830.1 | 33.333 | 150 | 97 | 3 | 3 | 150 | 184 | 332 | 2.17e-23 | 94.0 |
| Msa0946310 | AT1G70850.2 | 32.667 | 150 | 98 | 3 | 3 | 150 | 9 | 157 | 4.54e-24 | 94.0 |
| Msa0946310 | AT1G70830.4 | 33.333 | 150 | 97 | 3 | 3 | 150 | 137 | 285 | 8.61e-24 | 94.4 |
| Msa0946310 | AT1G70830.4 | 32.258 | 93 | 62 | 1 | 59 | 150 | 31 | 123 | 5.39e-14 | 67.8 |
| Msa0946310 | AT1G70850.3 | 32.667 | 150 | 98 | 3 | 3 | 150 | 9 | 157 | 1.48e-23 | 94.0 |
| Msa0946310 | AT1G70850.3 | 33.571 | 140 | 90 | 3 | 13 | 150 | 175 | 313 | 4.58e-23 | 92.8 |
| Msa0946310 | AT1G70850.1 | 32.667 | 150 | 98 | 3 | 3 | 150 | 9 | 157 | 1.48e-23 | 94.0 |
| Msa0946310 | AT1G70850.1 | 33.571 | 140 | 90 | 3 | 13 | 150 | 175 | 313 | 4.58e-23 | 92.8 |
| Msa0946310 | AT1G23130.1 | 30.201 | 149 | 102 | 2 | 3 | 150 | 10 | 157 | 4.07e-23 | 89.4 |
| Msa0946310 | AT1G70870.1 | 35.099 | 151 | 85 | 4 | 1 | 151 | 1 | 138 | 1.41e-22 | 87.4 |
| Msa0946310 | AT5G28000.1 | 28.000 | 150 | 105 | 3 | 3 | 150 | 13 | 161 | 1.59e-20 | 82.8 |
| Msa0946310 | AT1G23120.1 | 27.083 | 144 | 100 | 3 | 7 | 150 | 7 | 145 | 2.98e-20 | 81.6 |
| Msa0946310 | AT1G70880.1 | 28.000 | 150 | 105 | 3 | 3 | 150 | 8 | 156 | 3.68e-20 | 81.6 |
| Msa0946310 | AT1G23120.2 | 27.083 | 144 | 100 | 3 | 7 | 150 | 57 | 195 | 1.16e-19 | 81.6 |
| Msa0946310 | AT1G14930.1 | 30.968 | 155 | 100 | 4 | 1 | 152 | 1 | 151 | 2.85e-19 | 79.3 |
| Msa0946310 | AT4G23670.1 | 30.968 | 155 | 100 | 4 | 1 | 152 | 1 | 151 | 7.26e-17 | 73.2 |
| Msa0946310 | AT2G01520.1 | 30.323 | 155 | 101 | 4 | 1 | 152 | 1 | 151 | 7.91e-17 | 72.8 |
| Msa0946310 | AT1G24020.1 | 30.065 | 153 | 103 | 3 | 1 | 151 | 1 | 151 | 1.17e-15 | 70.1 |
| Msa0946310 | AT1G24020.2 | 30.065 | 153 | 103 | 3 | 1 | 151 | 1 | 151 | 1.17e-15 | 70.1 |
| Msa0946310 | AT4G14060.1 | 30.323 | 155 | 101 | 4 | 1 | 152 | 1 | 151 | 3.80e-15 | 68.6 |
| Msa0946310 | AT1G35260.1 | 22.517 | 151 | 113 | 3 | 2 | 150 | 1 | 149 | 4.65e-15 | 68.6 |
| Msa0946310 | AT1G14940.1 | 28.477 | 151 | 105 | 3 | 1 | 150 | 1 | 149 | 7.11e-15 | 67.8 |
| Msa0946310 | AT4G23680.1 | 29.032 | 155 | 103 | 4 | 1 | 152 | 1 | 151 | 1.53e-14 | 67.0 |
| Msa0946310 | AT2G01530.1 | 29.032 | 155 | 103 | 4 | 1 | 152 | 1 | 151 | 1.73e-14 | 67.0 |
| Msa0946310 | AT1G14950.1 | 28.758 | 153 | 104 | 4 | 1 | 151 | 1 | 150 | 1.85e-13 | 64.3 |
| Msa0946310 | AT1G30990.1 | 25.828 | 151 | 108 | 4 | 1 | 150 | 1 | 148 | 1.21e-11 | 59.3 |
| Msa0946310 | AT1G14960.1 | 26.316 | 152 | 109 | 3 | 1 | 151 | 1 | 150 | 8.71e-11 | 57.0 |
| Msa0946310 | AT3G26450.1 | 26.282 | 156 | 107 | 5 | 1 | 152 | 1 | 152 | 9.01e-11 | 57.0 |
Find 29 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCTCTTCGGTGGAGATAT+TGG | 0.245046 | 6_3:-26898064 | Msa0946310:CDS |
| AGCTCTTCGGTGGAGATATT+GGG | 0.329670 | 6_3:-26898063 | Msa0946310:CDS |
| ATATTCAATTGTCCATTTGA+TGG | 0.352752 | 6_3:+26897979 | None:intergenic |
| GTCATCCCCTTGATGTAGCT+TGG | 0.401893 | 6_3:+26899575 | None:intergenic |
| AAACATTGGACTTATGTCAT+AGG | 0.403651 | 6_3:-26899531 | Msa0946310:intron |
| TAGAGATATTGATGCTCATC+TGG | 0.421031 | 6_3:-26897894 | Msa0946310:CDS |
| ATTCAAATAATTGATAATAG+TGG | 0.432059 | 6_3:-26898013 | Msa0946310:CDS |
| ACGTAGTCCATCCAGCCATT+AGG | 0.444330 | 6_3:+26897929 | None:intergenic |
| AGATATTGGGGAGAACTATA+AGG | 0.448937 | 6_3:-26898050 | Msa0946310:CDS |
| AGCTACATCAAGGGGATGAC+TGG | 0.453220 | 6_3:-26899572 | Msa0946310:CDS |
| GAGGATATTGACCCTCCTAA+TGG | 0.460289 | 6_3:-26897944 | Msa0946310:CDS |
| GCAGCAGTGCTGCCATCAAA+TGG | 0.475803 | 6_3:-26897991 | Msa0946310:CDS |
| GGTAAACTTAGTACTGAACT+TGG | 0.476618 | 6_3:-26899684 | Msa0946310:CDS |
| CTTCCAAGGATGGTGCTCAA+TGG | 0.508173 | 6_3:-26899705 | None:intergenic |
| AAACTCACTTACAAGCTCTT+CGG | 0.512951 | 6_3:-26898076 | Msa0946310:CDS |
| CATGAAACCAAGCTACATCA+AGG | 0.525025 | 6_3:-26899582 | Msa0946310:CDS |
| ATATTGACCCTCCTAATGGC+TGG | 0.525673 | 6_3:-26897940 | Msa0946310:CDS |
| TTTCATGAACTCTTTCACAA+TGG | 0.533960 | 6_3:+26899598 | None:intergenic |
| TAGTCCATCCAGCCATTAGG+AGG | 0.553714 | 6_3:+26897932 | None:intergenic |
| TGACCCTCCTAATGGCTGGA+TGG | 0.577019 | 6_3:-26897936 | Msa0946310:CDS |
| TGACTGGCATCACACTGATA+CGG | 0.601188 | 6_3:-26899556 | Msa0946310:CDS |
| GTAAACTTAGTACTGAACTT+GGG | 0.605653 | 6_3:-26899683 | Msa0946310:CDS |
| ACACTGATACGGTTAAACAT+TGG | 0.605669 | 6_3:-26899545 | Msa0946310:CDS |
| GCTCTTCGGTGGAGATATTG+GGG | 0.615379 | 6_3:-26898062 | Msa0946310:CDS |
| CTCACTTACAAGCTCTTCGG+TGG | 0.619750 | 6_3:-26898073 | Msa0946310:CDS |
| ATGAAACCAAGCTACATCAA+GGG | 0.623559 | 6_3:-26899581 | Msa0946310:CDS |
| TGAAACCAAGCTACATCAAG+GGG | 0.635241 | 6_3:-26899580 | Msa0946310:CDS |
| AGTCCATCCAGCCATTAGGA+GGG | 0.659406 | 6_3:+26897933 | None:intergenic |
| TGAATATGAGAAGATCAATG+AGG | 0.677949 | 6_3:-26897963 | Msa0946310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTCTAATTTTATCATTTT+GGG | + | chr6_3:26898329-26898348 | None:intergenic | 15.0% |
| !! | ACGTAAATTGTTAAAATAAA+AGG | + | chr6_3:26898403-26898422 | None:intergenic | 15.0% |
| !!! | TAAAATTACTTTAAAACAAC+TGG | - | chr6_3:26899234-26899253 | Msa0946310:intron | 15.0% |
| !! | AATTTAAGAACAATATTTGT+AGG | + | chr6_3:26899320-26899339 | None:intergenic | 15.0% |
| !!! | ATTATTTAAAACGAAAGATA+AGG | + | chr6_3:26899368-26899387 | None:intergenic | 15.0% |
| !!! | ATTCAAATAATTGATAATAG+TGG | - | chr6_3:26899566-26899585 | Msa0946310:CDS | 15.0% |
| !!! | CTTTCTAATTTTATCATTTT+GGG | + | chr6_3:26898329-26898348 | None:intergenic | 15.0% |
| !! | ACGTAAATTGTTAAAATAAA+AGG | + | chr6_3:26898403-26898422 | None:intergenic | 15.0% |
| !!! | TAAAATTACTTTAAAACAAC+TGG | - | chr6_3:26899234-26899253 | Msa0946310:intron | 15.0% |
| !! | AATTTAAGAACAATATTTGT+AGG | + | chr6_3:26899320-26899339 | None:intergenic | 15.0% |
| !!! | ATTATTTAAAACGAAAGATA+AGG | + | chr6_3:26899368-26899387 | None:intergenic | 15.0% |
| !!! | ATTCAAATAATTGATAATAG+TGG | - | chr6_3:26899566-26899585 | Msa0946310:CDS | 15.0% |
| !! | TATTCTAATTAAGGTCTTTA+AGG | - | chr6_3:26898275-26898294 | Msa0946310:intron | 20.0% |
| !!! | TAATTTTATCATTTTGGGAT+AGG | + | chr6_3:26898324-26898343 | None:intergenic | 20.0% |
| !!! | GCTTTCTAATTTTATCATTT+TGG | + | chr6_3:26898330-26898349 | None:intergenic | 20.0% |
| !! | CATATGAAAATAAAATTGTG+TGG | + | chr6_3:26899400-26899419 | None:intergenic | 20.0% |
| !!! | CACACAATTTTATTTTCATA+TGG | - | chr6_3:26899398-26899417 | Msa0946310:intron | 20.0% |
| !! | TATTCTAATTAAGGTCTTTA+AGG | - | chr6_3:26898275-26898294 | Msa0946310:intron | 20.0% |
| !!! | TAATTTTATCATTTTGGGAT+AGG | + | chr6_3:26898324-26898343 | None:intergenic | 20.0% |
| !!! | GCTTTCTAATTTTATCATTT+TGG | + | chr6_3:26898330-26898349 | None:intergenic | 20.0% |
| !! | CATATGAAAATAAAATTGTG+TGG | + | chr6_3:26899400-26899419 | None:intergenic | 20.0% |
| !!! | CACACAATTTTATTTTCATA+TGG | - | chr6_3:26899398-26899417 | Msa0946310:intron | 20.0% |
| !! | TACATGTACTATTTTATCGT+TGG | + | chr6_3:26898882-26898901 | None:intergenic | 25.0% |
| ! | CTTAAACTAGAAATCTGAAA+AGG | - | chr6_3:26899277-26899296 | Msa0946310:intron | 25.0% |
| ! | ATATTCAATTGTCCATTTGA+TGG | + | chr6_3:26899603-26899622 | None:intergenic | 25.0% |
| !! | TACATGTACTATTTTATCGT+TGG | + | chr6_3:26898882-26898901 | None:intergenic | 25.0% |
| ! | CTTAAACTAGAAATCTGAAA+AGG | - | chr6_3:26899277-26899296 | Msa0946310:intron | 25.0% |
| ! | ATATTCAATTGTCCATTTGA+TGG | + | chr6_3:26899603-26899622 | None:intergenic | 25.0% |
| ! | GTAAACTTAGTACTGAACTT+GGG | - | chr6_3:26897896-26897915 | Msa0946310:CDS | 30.0% |
| TTTCATGAACTCTTTCACAA+TGG | + | chr6_3:26897984-26898003 | None:intergenic | 30.0% | |
| AAACATTGGACTTATGTCAT+AGG | - | chr6_3:26898048-26898067 | Msa0946310:CDS | 30.0% | |
| ! | TTGATAGTAAGTAAACGTAG+AGG | + | chr6_3:26898374-26898393 | None:intergenic | 30.0% |
| !! | AGTGTTAACTTGTGTCTTTA+GGG | - | chr6_3:26898436-26898455 | Msa0946310:intron | 30.0% |
| ACAAGTTAACATTTCCCTTA+GGG | - | chr6_3:26898598-26898617 | Msa0946310:intron | 30.0% | |
| !!! | AGTCATGAGAATGACTTTTT+TGG | - | chr6_3:26898636-26898655 | Msa0946310:intron | 30.0% |
| ! | GATGAATTGATGATACTATG+AGG | + | chr6_3:26898737-26898756 | None:intergenic | 30.0% |
| TCTTAAGTGTTACACTTTGT+GGG | + | chr6_3:26898817-26898836 | None:intergenic | 30.0% | |
| AAACTTAGAGATCCAACTAA+GGG | + | chr6_3:26899051-26899070 | None:intergenic | 30.0% | |
| TAAACTTAGAGATCCAACTA+AGG | + | chr6_3:26899052-26899071 | None:intergenic | 30.0% | |
| !!! | GATTCTAGTGTGTTTTTTGA+AGG | - | chr6_3:26899168-26899187 | Msa0946310:intron | 30.0% |
| GTGAATAAGATTTGCAGAAT+CGG | - | chr6_3:26899197-26899216 | Msa0946310:intron | 30.0% | |
| AAAACAACTGGTACAAAACT+TGG | - | chr6_3:26899246-26899265 | Msa0946310:intron | 30.0% | |
| TGAATATGAGAAGATCAATG+AGG | - | chr6_3:26899616-26899635 | Msa0946310:CDS | 30.0% | |
| ! | GTAAACTTAGTACTGAACTT+GGG | - | chr6_3:26897896-26897915 | Msa0946310:CDS | 30.0% |
| TTTCATGAACTCTTTCACAA+TGG | + | chr6_3:26897984-26898003 | None:intergenic | 30.0% | |
| AAACATTGGACTTATGTCAT+AGG | - | chr6_3:26898048-26898067 | Msa0946310:CDS | 30.0% | |
| ! | TTGATAGTAAGTAAACGTAG+AGG | + | chr6_3:26898374-26898393 | None:intergenic | 30.0% |
| !! | AGTGTTAACTTGTGTCTTTA+GGG | - | chr6_3:26898436-26898455 | Msa0946310:intron | 30.0% |
| ACAAGTTAACATTTCCCTTA+GGG | - | chr6_3:26898598-26898617 | Msa0946310:intron | 30.0% | |
| !!! | AGTCATGAGAATGACTTTTT+TGG | - | chr6_3:26898636-26898655 | Msa0946310:intron | 30.0% |
| ! | GATGAATTGATGATACTATG+AGG | + | chr6_3:26898737-26898756 | None:intergenic | 30.0% |
| TCTTAAGTGTTACACTTTGT+GGG | + | chr6_3:26898817-26898836 | None:intergenic | 30.0% | |
| AAACTTAGAGATCCAACTAA+GGG | + | chr6_3:26899051-26899070 | None:intergenic | 30.0% | |
| TAAACTTAGAGATCCAACTA+AGG | + | chr6_3:26899052-26899071 | None:intergenic | 30.0% | |
| !!! | GATTCTAGTGTGTTTTTTGA+AGG | - | chr6_3:26899168-26899187 | Msa0946310:intron | 30.0% |
| GTGAATAAGATTTGCAGAAT+CGG | - | chr6_3:26899197-26899216 | Msa0946310:intron | 30.0% | |
| AAAACAACTGGTACAAAACT+TGG | - | chr6_3:26899246-26899265 | Msa0946310:intron | 30.0% | |
| TGAATATGAGAAGATCAATG+AGG | - | chr6_3:26899616-26899635 | Msa0946310:CDS | 30.0% | |
| ! | GGTAAACTTAGTACTGAACT+TGG | - | chr6_3:26897895-26897914 | Msa0946310:CDS | 35.0% |
| ATGAAACCAAGCTACATCAA+GGG | - | chr6_3:26897998-26898017 | Msa0946310:CDS | 35.0% | |
| ACACTGATACGGTTAAACAT+TGG | - | chr6_3:26898034-26898053 | Msa0946310:CDS | 35.0% | |
| ! | GCTTTTACATGTTCTCTTGT+TGG | - | chr6_3:26898348-26898367 | Msa0946310:intron | 35.0% |
| !! | CAGTGTTAACTTGTGTCTTT+AGG | - | chr6_3:26898435-26898454 | Msa0946310:intron | 35.0% |
| AATCATTACCTTGTGTCTTG+AGG | - | chr6_3:26898573-26898592 | Msa0946310:intron | 35.0% | |
| ATCATTACCTTGTGTCTTGA+GGG | - | chr6_3:26898574-26898593 | Msa0946310:intron | 35.0% | |
| GACAAGTTAACATTTCCCTT+AGG | - | chr6_3:26898597-26898616 | Msa0946310:intron | 35.0% | |
| TTCCCTTAGGGAAAATTCTA+TGG | - | chr6_3:26898610-26898629 | Msa0946310:intron | 35.0% | |
| ! | CACCATAGAATTTTCCCTAA+GGG | + | chr6_3:26898615-26898634 | None:intergenic | 35.0% |
| ! | TCACCATAGAATTTTCCCTA+AGG | + | chr6_3:26898616-26898635 | None:intergenic | 35.0% |
| ATGCCATTGTACAAATAGTG+GGG | + | chr6_3:26898702-26898721 | None:intergenic | 35.0% | |
| GATGCCATTGTACAAATAGT+GGG | + | chr6_3:26898703-26898722 | None:intergenic | 35.0% | |
| TGATGCCATTGTACAAATAG+TGG | + | chr6_3:26898704-26898723 | None:intergenic | 35.0% | |
| GTACAATGGCATCAAAAGTT+TGG | - | chr6_3:26898710-26898729 | Msa0946310:intron | 35.0% | |
| TGTTACGCTTATAACAAGGT+TGG | + | chr6_3:26898793-26898812 | None:intergenic | 35.0% | |
| CTTAAGTGTTACACTTTGTG+GGG | + | chr6_3:26898816-26898835 | None:intergenic | 35.0% | |
| GTCTTAAGTGTTACACTTTG+TGG | + | chr6_3:26898818-26898837 | None:intergenic | 35.0% | |
| AGTAATGCTTTGCAACATCT+TGG | + | chr6_3:26898908-26898927 | None:intergenic | 35.0% | |
| !!! | GTGTGTTTTTTGAAGGACTA+AGG | - | chr6_3:26899175-26899194 | Msa0946310:intron | 35.0% |
| AAACTCACTTACAAGCTCTT+CGG | - | chr6_3:26899503-26899522 | Msa0946310:intron | 35.0% | |
| AGATATTGGGGAGAACTATA+AGG | - | chr6_3:26899529-26899548 | Msa0946310:intron | 35.0% | |
| TAGAGATATTGATGCTCATC+TGG | - | chr6_3:26899685-26899704 | Msa0946310:CDS | 35.0% | |
| ! | GGTAAACTTAGTACTGAACT+TGG | - | chr6_3:26897895-26897914 | Msa0946310:CDS | 35.0% |
| ATGAAACCAAGCTACATCAA+GGG | - | chr6_3:26897998-26898017 | Msa0946310:CDS | 35.0% | |
| ACACTGATACGGTTAAACAT+TGG | - | chr6_3:26898034-26898053 | Msa0946310:CDS | 35.0% | |
| ! | GCTTTTACATGTTCTCTTGT+TGG | - | chr6_3:26898348-26898367 | Msa0946310:intron | 35.0% |
| !! | CAGTGTTAACTTGTGTCTTT+AGG | - | chr6_3:26898435-26898454 | Msa0946310:intron | 35.0% |
| AATCATTACCTTGTGTCTTG+AGG | - | chr6_3:26898573-26898592 | Msa0946310:intron | 35.0% | |
| ATCATTACCTTGTGTCTTGA+GGG | - | chr6_3:26898574-26898593 | Msa0946310:intron | 35.0% | |
| GACAAGTTAACATTTCCCTT+AGG | - | chr6_3:26898597-26898616 | Msa0946310:intron | 35.0% | |
| TTCCCTTAGGGAAAATTCTA+TGG | - | chr6_3:26898610-26898629 | Msa0946310:intron | 35.0% | |
| ! | CACCATAGAATTTTCCCTAA+GGG | + | chr6_3:26898615-26898634 | None:intergenic | 35.0% |
| ! | TCACCATAGAATTTTCCCTA+AGG | + | chr6_3:26898616-26898635 | None:intergenic | 35.0% |
| ATGCCATTGTACAAATAGTG+GGG | + | chr6_3:26898702-26898721 | None:intergenic | 35.0% | |
| GATGCCATTGTACAAATAGT+GGG | + | chr6_3:26898703-26898722 | None:intergenic | 35.0% | |
| TGATGCCATTGTACAAATAG+TGG | + | chr6_3:26898704-26898723 | None:intergenic | 35.0% | |
| GTACAATGGCATCAAAAGTT+TGG | - | chr6_3:26898710-26898729 | Msa0946310:intron | 35.0% | |
| TGTTACGCTTATAACAAGGT+TGG | + | chr6_3:26898793-26898812 | None:intergenic | 35.0% | |
| CTTAAGTGTTACACTTTGTG+GGG | + | chr6_3:26898816-26898835 | None:intergenic | 35.0% | |
| GTCTTAAGTGTTACACTTTG+TGG | + | chr6_3:26898818-26898837 | None:intergenic | 35.0% | |
| AGTAATGCTTTGCAACATCT+TGG | + | chr6_3:26898908-26898927 | None:intergenic | 35.0% | |
| !!! | GTGTGTTTTTTGAAGGACTA+AGG | - | chr6_3:26899175-26899194 | Msa0946310:intron | 35.0% |
| AAACTCACTTACAAGCTCTT+CGG | - | chr6_3:26899503-26899522 | Msa0946310:intron | 35.0% | |
| AGATATTGGGGAGAACTATA+AGG | - | chr6_3:26899529-26899548 | Msa0946310:intron | 35.0% | |
| TAGAGATATTGATGCTCATC+TGG | - | chr6_3:26899685-26899704 | Msa0946310:CDS | 35.0% | |
| CATGAAACCAAGCTACATCA+AGG | - | chr6_3:26897997-26898016 | Msa0946310:CDS | 40.0% | |
| TGAAACCAAGCTACATCAAG+GGG | - | chr6_3:26897999-26898018 | Msa0946310:CDS | 40.0% | |
| !! | GTCTTTAAGGAGTACTCAAG+AGG | - | chr6_3:26898288-26898307 | Msa0946310:intron | 40.0% |
| TCATTACCTTGTGTCTTGAG+GGG | - | chr6_3:26898575-26898594 | Msa0946310:intron | 40.0% | |
| ACACCCCACTATTTGTACAA+TGG | - | chr6_3:26898696-26898715 | Msa0946310:intron | 40.0% | |
| TAGAGATCCAACTAAGGGAA+GGG | + | chr6_3:26899046-26899065 | None:intergenic | 40.0% | |
| TTAGAGATCCAACTAAGGGA+AGG | + | chr6_3:26899047-26899066 | None:intergenic | 40.0% | |
| CATGAAACCAAGCTACATCA+AGG | - | chr6_3:26897997-26898016 | Msa0946310:CDS | 40.0% | |
| TGAAACCAAGCTACATCAAG+GGG | - | chr6_3:26897999-26898018 | Msa0946310:CDS | 40.0% | |
| !! | GTCTTTAAGGAGTACTCAAG+AGG | - | chr6_3:26898288-26898307 | Msa0946310:intron | 40.0% |
| TCATTACCTTGTGTCTTGAG+GGG | - | chr6_3:26898575-26898594 | Msa0946310:intron | 40.0% | |
| ACACCCCACTATTTGTACAA+TGG | - | chr6_3:26898696-26898715 | Msa0946310:intron | 40.0% | |
| TAGAGATCCAACTAAGGGAA+GGG | + | chr6_3:26899046-26899065 | None:intergenic | 40.0% | |
| TTAGAGATCCAACTAAGGGA+AGG | + | chr6_3:26899047-26899066 | None:intergenic | 40.0% | |
| TGACTGGCATCACACTGATA+CGG | - | chr6_3:26898023-26898042 | Msa0946310:CDS | 45.0% | |
| ! | GGGGTGTTACGCTTATAACA+AGG | + | chr6_3:26898797-26898816 | None:intergenic | 45.0% |
| ! | CTACTAGTTTCTCCTCCTGA+AGG | - | chr6_3:26899073-26899092 | Msa0946310:intron | 45.0% |
| TGCCATCTGTTGTCATGTGA+CGG | + | chr6_3:26899433-26899452 | None:intergenic | 45.0% | |
| AAGCTCTTCGGTGGAGATAT+TGG | - | chr6_3:26899515-26899534 | Msa0946310:intron | 45.0% | |
| AGCTCTTCGGTGGAGATATT+GGG | - | chr6_3:26899516-26899535 | Msa0946310:intron | 45.0% | |
| GAGGATATTGACCCTCCTAA+TGG | - | chr6_3:26899635-26899654 | Msa0946310:CDS | 45.0% | |
| ATATTGACCCTCCTAATGGC+TGG | - | chr6_3:26899639-26899658 | Msa0946310:CDS | 45.0% | |
| TGACTGGCATCACACTGATA+CGG | - | chr6_3:26898023-26898042 | Msa0946310:CDS | 45.0% | |
| ! | GGGGTGTTACGCTTATAACA+AGG | + | chr6_3:26898797-26898816 | None:intergenic | 45.0% |
| ! | CTACTAGTTTCTCCTCCTGA+AGG | - | chr6_3:26899073-26899092 | Msa0946310:intron | 45.0% |
| TGCCATCTGTTGTCATGTGA+CGG | + | chr6_3:26899433-26899452 | None:intergenic | 45.0% | |
| AAGCTCTTCGGTGGAGATAT+TGG | - | chr6_3:26899515-26899534 | Msa0946310:intron | 45.0% | |
| AGCTCTTCGGTGGAGATATT+GGG | - | chr6_3:26899516-26899535 | Msa0946310:intron | 45.0% | |
| GAGGATATTGACCCTCCTAA+TGG | - | chr6_3:26899635-26899654 | Msa0946310:CDS | 45.0% | |
| ATATTGACCCTCCTAATGGC+TGG | - | chr6_3:26899639-26899658 | Msa0946310:CDS | 45.0% | |
| !!! | AATTGAATTTAAAAAATTTT+AGG | + | chr6_3:26898152-26898171 | None:intergenic | 5.0% |
| !! | TATAAAAAATATTCTAATTA+AGG | - | chr6_3:26898266-26898285 | Msa0946310:intron | 5.0% |
| !!! | AATTGAATTTAAAAAATTTT+AGG | + | chr6_3:26898152-26898171 | None:intergenic | 5.0% |
| !! | TATAAAAAATATTCTAATTA+AGG | - | chr6_3:26898266-26898285 | Msa0946310:intron | 5.0% |
| GTCATCCCCTTGATGTAGCT+TGG | + | chr6_3:26898007-26898026 | None:intergenic | 50.0% | |
| AGCTACATCAAGGGGATGAC+TGG | - | chr6_3:26898007-26898026 | Msa0946310:CDS | 50.0% | |
| ACTTGTCCCCTCAAGACACA+AGG | + | chr6_3:26898584-26898603 | None:intergenic | 50.0% | |
| AGAAGCTCCCTTCCCTTAGT+TGG | - | chr6_3:26899036-26899055 | Msa0946310:intron | 50.0% | |
| TTTCTCCTCCTGAAGGTCTC+AGG | - | chr6_3:26899080-26899099 | Msa0946310:intron | 50.0% | |
| GAATCGAACCTGAGACCTTC+AGG | + | chr6_3:26899091-26899110 | None:intergenic | 50.0% | |
| TCCCGTCACATGACAACAGA+TGG | - | chr6_3:26899428-26899447 | Msa0946310:intron | 50.0% | |
| GCCATCTGTTGTCATGTGAC+GGG | + | chr6_3:26899432-26899451 | None:intergenic | 50.0% | |
| CTCACTTACAAGCTCTTCGG+TGG | - | chr6_3:26899506-26899525 | Msa0946310:intron | 50.0% | |
| GCTCTTCGGTGGAGATATTG+GGG | - | chr6_3:26899517-26899536 | Msa0946310:intron | 50.0% | |
| AGTCCATCCAGCCATTAGGA+GGG | + | chr6_3:26899649-26899668 | None:intergenic | 50.0% | |
| TAGTCCATCCAGCCATTAGG+AGG | + | chr6_3:26899650-26899669 | None:intergenic | 50.0% | |
| ACGTAGTCCATCCAGCCATT+AGG | + | chr6_3:26899653-26899672 | None:intergenic | 50.0% | |
| GTCATCCCCTTGATGTAGCT+TGG | + | chr6_3:26898007-26898026 | None:intergenic | 50.0% | |
| AGCTACATCAAGGGGATGAC+TGG | - | chr6_3:26898007-26898026 | Msa0946310:CDS | 50.0% | |
| ACTTGTCCCCTCAAGACACA+AGG | + | chr6_3:26898584-26898603 | None:intergenic | 50.0% | |
| AGAAGCTCCCTTCCCTTAGT+TGG | - | chr6_3:26899036-26899055 | Msa0946310:intron | 50.0% | |
| TTTCTCCTCCTGAAGGTCTC+AGG | - | chr6_3:26899080-26899099 | Msa0946310:intron | 50.0% | |
| GAATCGAACCTGAGACCTTC+AGG | + | chr6_3:26899091-26899110 | None:intergenic | 50.0% | |
| TCCCGTCACATGACAACAGA+TGG | - | chr6_3:26899428-26899447 | Msa0946310:intron | 50.0% | |
| GCCATCTGTTGTCATGTGAC+GGG | + | chr6_3:26899432-26899451 | None:intergenic | 50.0% | |
| CTCACTTACAAGCTCTTCGG+TGG | - | chr6_3:26899506-26899525 | Msa0946310:intron | 50.0% | |
| GCTCTTCGGTGGAGATATTG+GGG | - | chr6_3:26899517-26899536 | Msa0946310:intron | 50.0% | |
| AGTCCATCCAGCCATTAGGA+GGG | + | chr6_3:26899649-26899668 | None:intergenic | 50.0% | |
| TAGTCCATCCAGCCATTAGG+AGG | + | chr6_3:26899650-26899669 | None:intergenic | 50.0% | |
| ACGTAGTCCATCCAGCCATT+AGG | + | chr6_3:26899653-26899672 | None:intergenic | 50.0% | |
| GGAGCTTCTACAGTGCAGTC+AGG | + | chr6_3:26899025-26899044 | None:intergenic | 55.0% | |
| TCGAACCTGAGACCTTCAGG+AGG | + | chr6_3:26899088-26899107 | None:intergenic | 55.0% | |
| GCAGCAGTGCTGCCATCAAA+TGG | - | chr6_3:26899588-26899607 | Msa0946310:CDS | 55.0% | |
| TGACCCTCCTAATGGCTGGA+TGG | - | chr6_3:26899643-26899662 | Msa0946310:CDS | 55.0% | |
| GGAGCTTCTACAGTGCAGTC+AGG | + | chr6_3:26899025-26899044 | None:intergenic | 55.0% | |
| TCGAACCTGAGACCTTCAGG+AGG | + | chr6_3:26899088-26899107 | None:intergenic | 55.0% | |
| GCAGCAGTGCTGCCATCAAA+TGG | - | chr6_3:26899588-26899607 | Msa0946310:CDS | 55.0% | |
| TGACCCTCCTAATGGCTGGA+TGG | - | chr6_3:26899643-26899662 | Msa0946310:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 26897883 | 26899718 | 26897883 | ID=Msa0946310;Name=Msa0946310 |
| chr6_3 | mRNA | 26897883 | 26899718 | 26897883 | ID=Msa0946310-mRNA-1;Parent=Msa0946310;Name=Msa0946310-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|1|1|2|0|152 |
| chr6_3 | exon | 26899532 | 26899718 | 26899532 | ID=Msa0946310-mRNA-1:exon:7433;Parent=Msa0946310-mRNA-1 |
| chr6_3 | exon | 26897883 | 26898154 | 26897883 | ID=Msa0946310-mRNA-1:exon:7432;Parent=Msa0946310-mRNA-1 |
| chr6_3 | CDS | 26899532 | 26899718 | 26899532 | ID=Msa0946310-mRNA-1:cds;Parent=Msa0946310-mRNA-1 |
| chr6_3 | CDS | 26897883 | 26898154 | 26897883 | ID=Msa0946310-mRNA-1:cds;Parent=Msa0946310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
