Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323080 | XP_013445244.1 | 92.105 | 152 | 12 | 0 | 1 | 152 | 1 | 152 | 1.26e-99 | 293 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323080 | sp|Q9SSK5|MLP43_ARATH | 34.000 | 150 | 96 | 3 | 3 | 150 | 7 | 155 | 3.13e-26 | 100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323080 | A0A072U0G0 | 92.105 | 152 | 12 | 0 | 1 | 152 | 1 | 152 | 6.03e-100 | 293 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004590 | Msa1323080 | 0.800994 | 1.109950e-48 | -8.615850e-47 |
| Msa0010150 | Msa1323080 | 0.825881 | 3.679573e-54 | -8.615850e-47 |
| Msa0013270 | Msa1323080 | 0.804753 | 1.856425e-49 | -8.615850e-47 |
| Msa0045810 | Msa1323080 | 0.800677 | 1.288058e-48 | -8.615850e-47 |
| Msa0048950 | Msa1323080 | 0.804354 | 2.248883e-49 | -8.615850e-47 |
| Msa0084150 | Msa1323080 | 0.813684 | 2.259890e-51 | -8.615850e-47 |
| Msa0102920 | Msa1323080 | 0.800446 | 1.436018e-48 | -8.615850e-47 |
| Msa0609460 | Msa1323080 | 0.803509 | 3.369777e-49 | -8.615850e-47 |
| Msa0622880 | Msa1323080 | 0.813441 | 2.555688e-51 | -8.615850e-47 |
| Msa0623250 | Msa1323080 | 0.801781 | 7.658894e-49 | -8.615850e-47 |
| Msa0643840 | Msa1323080 | 0.804031 | 2.625356e-49 | -8.615850e-47 |
| Msa0645370 | Msa1323080 | 0.803276 | 3.765356e-49 | -8.615850e-47 |
| Msa0667600 | Msa1323080 | 0.830054 | 3.644405e-55 | -8.615850e-47 |
| Msa0670360 | Msa1323080 | 0.813578 | 2.384169e-51 | -8.615850e-47 |
| Msa0692090 | Msa1323080 | 0.820035 | 8.482440e-53 | -8.615850e-47 |
| Msa0716980 | Msa1323080 | 0.813706 | 2.234280e-51 | -8.615850e-47 |
| Msa0768670 | Msa1323080 | 0.809276 | 2.049308e-50 | -8.615850e-47 |
| Msa0777250 | Msa1323080 | 0.807803 | 4.228581e-50 | -8.615850e-47 |
| Msa0777260 | Msa1323080 | 0.815246 | 1.019925e-51 | -8.615850e-47 |
| Msa0782590 | Msa1323080 | 0.810500 | 1.117480e-50 | -8.615850e-47 |
| Msa0804170 | Msa1323080 | 0.816090 | 6.615466e-52 | -8.615850e-47 |
| Msa0814230 | Msa1323080 | 0.810212 | 1.289592e-50 | -8.615850e-47 |
| Msa0817690 | Msa1323080 | 0.804079 | 2.565672e-49 | -8.615850e-47 |
| Msa0822410 | Msa1323080 | 0.800924 | 1.146946e-48 | -8.615850e-47 |
| Msa0128350 | Msa1323080 | 0.820605 | 6.279129e-53 | -8.615850e-47 |
| Msa0128730 | Msa1323080 | 0.809832 | 1.556764e-50 | -8.615850e-47 |
| Msa0143150 | Msa1323080 | 0.805344 | 1.396929e-49 | -8.615850e-47 |
| Msa0147680 | Msa1323080 | 0.809660 | 1.695845e-50 | -8.615850e-47 |
| Msa0150910 | Msa1323080 | 0.824307 | 8.667091e-54 | -8.615850e-47 |
| Msa0150920 | Msa1323080 | 0.801309 | 9.570011e-49 | -8.615850e-47 |
| Msa0174600 | Msa1323080 | 0.805303 | 1.424563e-49 | -8.615850e-47 |
| Msa0203880 | Msa1323080 | 0.806063 | 9.865058e-50 | -8.615850e-47 |
| Msa0206370 | Msa1323080 | 0.800403 | 1.465076e-48 | -8.615850e-47 |
| Msa0209060 | Msa1323080 | 0.811990 | 5.310961e-51 | -8.615850e-47 |
| Msa0213150 | Msa1323080 | 0.800958 | 1.128706e-48 | -8.615850e-47 |
| Msa0219800 | Msa1323080 | 0.819513 | 1.116343e-52 | -8.615850e-47 |
| Msa1256990 | Msa1323080 | 0.805138 | 1.542907e-49 | -8.615850e-47 |
| Msa1257200 | Msa1323080 | 0.816993 | 4.152292e-52 | -8.615850e-47 |
| Msa1265570 | Msa1323080 | 0.807608 | 4.651034e-50 | -8.615850e-47 |
| Msa1283980 | Msa1323080 | 0.804473 | 2.124668e-49 | -8.615850e-47 |
| Msa1300590 | Msa1323080 | 0.822868 | 1.881857e-53 | -8.615850e-47 |
| Msa1322500 | Msa1323080 | 0.813545 | 2.424514e-51 | -8.615850e-47 |
| Msa1322980 | Msa1323080 | 0.807136 | 5.856354e-50 | -8.615850e-47 |
| Msa1322990 | Msa1323080 | 0.881688 | 1.949344e-70 | -8.615850e-47 |
| Msa1323080 | Msa1334670 | 0.805965 | 1.034836e-49 | -8.615850e-47 |
| Msa1323080 | Msa1343590 | 0.827739 | 1.324559e-54 | -8.615850e-47 |
| Msa1323080 | Msa1365230 | 0.806815 | 6.849667e-50 | -8.615850e-47 |
| Msa1323080 | Msa1365450 | 0.801024 | 1.094439e-48 | -8.615850e-47 |
| Msa1323080 | Msa1368420 | 0.829222 | 5.808929e-55 | -8.615850e-47 |
| Msa1323080 | Msa1377200 | 0.811812 | 5.804683e-51 | -8.615850e-47 |
| Msa1323080 | Msa1383220 | 0.828481 | 8.777330e-55 | -8.615850e-47 |
| Msa1323080 | Msa1407670 | 0.807680 | 4.490879e-50 | -8.615850e-47 |
| Msa1323080 | Msa1409600 | 0.816023 | 6.846684e-52 | -8.615850e-47 |
| Msa1323080 | Msa1413020 | 0.817160 | 3.807690e-52 | -8.615850e-47 |
| Msa1323080 | Msa1417220 | 0.804235 | 2.381155e-49 | -8.615850e-47 |
| Msa1323080 | Msa1445890 | 0.827778 | 1.296104e-54 | -8.615850e-47 |
| Msa1323080 | Msa1445900 | 0.808969 | 2.385218e-50 | -8.615850e-47 |
| Msa1323080 | Msa1447790 | 0.809092 | 2.244301e-50 | -8.615850e-47 |
| Msa1323080 | Msa1449770 | 0.811344 | 7.336674e-51 | -8.615850e-47 |
| Msa1323080 | Msa1452920 | 0.803490 | 3.400596e-49 | -8.615850e-47 |
| Msa1323080 | Msa1455360 | 0.809370 | 1.957119e-50 | -8.615850e-47 |
| Msa1323080 | Msa1459610 | 0.805645 | 1.207656e-49 | -8.615850e-47 |
| Msa0366510 | Msa1323080 | 0.806329 | 8.674261e-50 | -8.615850e-47 |
| Msa0374040 | Msa1323080 | 0.813608 | 2.348389e-51 | -8.615850e-47 |
| Msa0380680 | Msa1323080 | 0.808141 | 3.583761e-50 | -8.615850e-47 |
| Msa0386910 | Msa1323080 | 0.834136 | 3.568139e-56 | -8.615850e-47 |
| Msa0423220 | Msa1323080 | 0.801515 | 8.684493e-49 | -8.615850e-47 |
| Msa0439000 | Msa1323080 | 0.813249 | 2.816253e-51 | -8.615850e-47 |
| Msa0439370 | Msa1323080 | 0.805792 | 1.124789e-49 | -8.615850e-47 |
| Msa0472390 | Msa1323080 | 0.833938 | 4.000581e-56 | -8.615850e-47 |
| Msa0987640 | Msa1323080 | 0.836023 | 1.192990e-56 | -8.615850e-47 |
| Msa1015560 | Msa1323080 | 0.829770 | 4.274407e-55 | -8.615850e-47 |
| Msa1021620 | Msa1323080 | 0.809562 | 1.779826e-50 | -8.615850e-47 |
| Msa1030320 | Msa1323080 | 0.840076 | 1.081187e-57 | -8.615850e-47 |
| Msa1049400 | Msa1323080 | 0.810096 | 1.365966e-50 | -8.615850e-47 |
| Msa1061670 | Msa1323080 | 0.803298 | 3.727451e-49 | -8.615850e-47 |
| Msa1069350 | Msa1323080 | 0.837122 | 6.263138e-57 | -8.615850e-47 |
| Msa1075030 | Msa1323080 | 0.805159 | 1.526839e-49 | -8.615850e-47 |
| Msa1079820 | Msa1323080 | 0.802277 | 6.054615e-49 | -8.615850e-47 |
| Msa1106960 | Msa1323080 | 0.800511 | 1.392825e-48 | -8.615850e-47 |
| Msa0251120 | Msa1323080 | 0.800318 | 1.524806e-48 | -8.615850e-47 |
| Msa0253450 | Msa1323080 | 0.817090 | 3.949992e-52 | -8.615850e-47 |
| Msa0258010 | Msa1323080 | 0.803932 | 2.753029e-49 | -8.615850e-47 |
| Msa0261400 | Msa1323080 | 0.837350 | 5.475385e-57 | -8.615850e-47 |
| Msa0288540 | Msa1323080 | 0.816722 | 4.775955e-52 | -8.615850e-47 |
| Msa0299030 | Msa1323080 | 0.805339 | 1.400241e-49 | -8.615850e-47 |
| Msa0326770 | Msa1323080 | 0.829510 | 4.943431e-55 | -8.615850e-47 |
| Msa0328100 | Msa1323080 | 0.802495 | 5.459253e-49 | -8.615850e-47 |
| Msa0349930 | Msa1323080 | 0.824641 | 7.229145e-54 | -8.615850e-47 |
| Msa1108560 | Msa1323080 | 0.806623 | 7.520321e-50 | -8.615850e-47 |
| Msa1147010 | Msa1323080 | 0.816482 | 5.406874e-52 | -8.615850e-47 |
| Msa1157210 | Msa1323080 | 0.847388 | 1.193333e-59 | -8.615850e-47 |
| Msa1164690 | Msa1323080 | 0.806422 | 8.289225e-50 | -8.615850e-47 |
| Msa1181090 | Msa1323080 | 0.800645 | 1.307509e-48 | -8.615850e-47 |
| Msa1206920 | Msa1323080 | 0.809906 | 1.500625e-50 | -8.615850e-47 |
| Msa1217890 | Msa1323080 | 0.802412 | 5.678463e-49 | -8.615850e-47 |
| Msa1220720 | Msa1323080 | 0.805131 | 1.547921e-49 | -8.615850e-47 |
| Msa0487100 | Msa1323080 | 0.804198 | 2.423136e-49 | -8.615850e-47 |
| Msa0491780 | Msa1323080 | 0.800645 | 1.307540e-48 | -8.615850e-47 |
| Msa0496380 | Msa1323080 | 0.809777 | 1.599903e-50 | -8.615850e-47 |
| Msa0515130 | Msa1323080 | 0.800172 | 1.632746e-48 | -8.615850e-47 |
| Msa0523720 | Msa1323080 | 0.838619 | 2.582250e-57 | -8.615850e-47 |
| Msa0531080 | Msa1323080 | 0.802885 | 4.536337e-49 | -8.615850e-47 |
| Msa0535570 | Msa1323080 | 0.824586 | 7.449380e-54 | -8.615850e-47 |
| Msa0539630 | Msa1323080 | 0.801071 | 1.070505e-48 | -8.615850e-47 |
| Msa0549170 | Msa1323080 | 0.809603 | 1.744206e-50 | -8.615850e-47 |
| Msa0555920 | Msa1323080 | 0.815686 | 8.141928e-52 | -8.615850e-47 |
| Msa0556720 | Msa1323080 | 0.807221 | 5.620345e-50 | -8.615850e-47 |
| Msa0565700 | Msa1323080 | 0.812846 | 3.451968e-51 | -8.615850e-47 |
| Msa0587920 | Msa1323080 | 0.813623 | 2.331250e-51 | -8.615850e-47 |
| Msa0589460 | Msa1323080 | 0.801506 | 8.719482e-49 | -8.615850e-47 |
| Msa0591490 | Msa1323080 | 0.813075 | 3.074571e-51 | -8.615850e-47 |
| Msa0602050 | Msa1323080 | 0.806050 | 9.928932e-50 | -8.615850e-47 |
| Msa0861730 | Msa1323080 | 0.816912 | 4.330481e-52 | -8.615850e-47 |
| Msa0873880 | Msa1323080 | 0.807822 | 4.189002e-50 | -8.615850e-47 |
| Msa0880910 | Msa1323080 | 0.816958 | 4.227598e-52 | -8.615850e-47 |
| Msa0893840 | Msa1323080 | 0.840071 | 1.083999e-57 | -8.615850e-47 |
| Msa0910890 | Msa1323080 | 0.813966 | 1.958965e-51 | -8.615850e-47 |
| Msa0913550 | Msa1323080 | 0.852523 | 4.365256e-61 | -8.615850e-47 |
| Msa0921180 | Msa1323080 | 0.800964 | 1.125689e-48 | -8.615850e-47 |
| Msa0932140 | Msa1323080 | 0.823749 | 1.171694e-53 | -8.615850e-47 |
| Msa0932150 | Msa1323080 | 0.813309 | 2.732618e-51 | -8.615850e-47 |
| Msa0946010 | Msa1323080 | 0.820619 | 6.234212e-53 | -8.615850e-47 |
| Msa0946310 | Msa1323080 | 0.974068 | 1.650695e-137 | -8.615850e-47 |
| Msa0951150 | Msa1323080 | 0.850469 | 1.664518e-60 | -8.615850e-47 |
| Msa0967780 | Msa1323080 | 0.804869 | 1.756026e-49 | -8.615850e-47 |
| Msa0970270 | Msa1323080 | 0.814709 | 1.341881e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323080 | MtrunA17_Chr8g0355761 | 92.105 | 152 | 12 | 0 | 1 | 152 | 1 | 152 | 1.16e-103 | 293 |
| Msa1323080 | MtrunA17_Chr8g0355741 | 72.848 | 151 | 41 | 0 | 1 | 151 | 1 | 151 | 7.59e-85 | 245 |
| Msa1323080 | MtrunA17_Chr8g0355781 | 71.053 | 152 | 44 | 0 | 1 | 152 | 1 | 152 | 6.70e-82 | 238 |
| Msa1323080 | MtrunA17_Chr8g0355721 | 71.711 | 152 | 43 | 0 | 1 | 152 | 1 | 152 | 1.78e-81 | 237 |
| Msa1323080 | MtrunA17_Chr8g0355661 | 69.737 | 152 | 45 | 1 | 1 | 152 | 1 | 151 | 2.47e-78 | 229 |
| Msa1323080 | MtrunA17_Chr8g0355811 | 67.763 | 152 | 48 | 1 | 1 | 152 | 1 | 151 | 5.26e-77 | 226 |
| Msa1323080 | MtrunA17_Chr8g0355641 | 65.563 | 151 | 52 | 0 | 1 | 151 | 1 | 151 | 1.32e-76 | 224 |
| Msa1323080 | MtrunA17_Chr8g0355821 | 65.132 | 152 | 52 | 1 | 1 | 152 | 1 | 151 | 1.06e-73 | 217 |
| Msa1323080 | MtrunA17_Chr8g0355801 | 65.132 | 152 | 52 | 1 | 1 | 152 | 1 | 151 | 3.09e-73 | 216 |
| Msa1323080 | MtrunA17_Chr8g0355791 | 65.132 | 152 | 52 | 1 | 1 | 152 | 1 | 151 | 1.69e-72 | 214 |
| Msa1323080 | MtrunA17_Chr8g0355771 | 63.816 | 152 | 54 | 1 | 1 | 152 | 1 | 151 | 1.90e-70 | 209 |
| Msa1323080 | MtrunA17_Chr1g0160371 | 43.137 | 153 | 84 | 2 | 1 | 151 | 1 | 152 | 2.09e-41 | 135 |
| Msa1323080 | MtrunA17_Chr1g0160381 | 37.255 | 153 | 93 | 2 | 1 | 151 | 5 | 156 | 1.09e-37 | 126 |
| Msa1323080 | MtrunA17_Chr1g0160391 | 39.103 | 156 | 87 | 4 | 1 | 149 | 1 | 155 | 1.02e-32 | 114 |
| Msa1323080 | MtrunA17_Chr1g0160801 | 35.811 | 148 | 86 | 4 | 7 | 152 | 7 | 147 | 8.04e-28 | 100 |
| Msa1323080 | MtrunA17_Chr8g0339261 | 33.103 | 145 | 94 | 3 | 6 | 149 | 8 | 150 | 2.74e-26 | 97.1 |
| Msa1323080 | MtrunA17_Chr1g0160351 | 41.935 | 93 | 52 | 1 | 61 | 151 | 1 | 93 | 6.34e-25 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323080 | AT1G70890.1 | 34.000 | 150 | 96 | 3 | 3 | 150 | 7 | 155 | 3.18e-27 | 100 |
| Msa1323080 | AT5G28010.1 | 34.000 | 150 | 96 | 3 | 3 | 150 | 15 | 163 | 1.24e-26 | 98.6 |
| Msa1323080 | AT5G28010.2 | 34.000 | 150 | 96 | 3 | 3 | 150 | 15 | 163 | 1.24e-26 | 98.6 |
| Msa1323080 | AT1G70840.1 | 32.667 | 150 | 98 | 3 | 3 | 150 | 20 | 168 | 1.51e-26 | 98.6 |
| Msa1323080 | AT1G70830.5 | 34.667 | 150 | 95 | 3 | 3 | 150 | 22 | 170 | 2.08e-26 | 98.2 |
| Msa1323080 | AT1G70830.3 | 34.667 | 150 | 95 | 3 | 3 | 150 | 22 | 170 | 3.58e-26 | 98.6 |
| Msa1323080 | AT1G70830.2 | 34.667 | 150 | 95 | 3 | 3 | 150 | 22 | 170 | 1.33e-25 | 98.2 |
| Msa1323080 | AT1G70830.1 | 34.667 | 150 | 95 | 3 | 3 | 150 | 22 | 170 | 4.34e-25 | 98.6 |
| Msa1323080 | AT1G70830.1 | 33.333 | 150 | 97 | 3 | 3 | 150 | 184 | 332 | 2.17e-23 | 94.0 |
| Msa1323080 | AT1G70850.2 | 32.667 | 150 | 98 | 3 | 3 | 150 | 9 | 157 | 4.54e-24 | 94.0 |
| Msa1323080 | AT1G70830.4 | 33.333 | 150 | 97 | 3 | 3 | 150 | 137 | 285 | 8.61e-24 | 94.4 |
| Msa1323080 | AT1G70830.4 | 32.258 | 93 | 62 | 1 | 59 | 150 | 31 | 123 | 5.39e-14 | 67.8 |
| Msa1323080 | AT1G70850.3 | 32.667 | 150 | 98 | 3 | 3 | 150 | 9 | 157 | 1.48e-23 | 94.0 |
| Msa1323080 | AT1G70850.3 | 33.571 | 140 | 90 | 3 | 13 | 150 | 175 | 313 | 4.58e-23 | 92.8 |
| Msa1323080 | AT1G70850.1 | 32.667 | 150 | 98 | 3 | 3 | 150 | 9 | 157 | 1.48e-23 | 94.0 |
| Msa1323080 | AT1G70850.1 | 33.571 | 140 | 90 | 3 | 13 | 150 | 175 | 313 | 4.58e-23 | 92.8 |
| Msa1323080 | AT1G23130.1 | 30.201 | 149 | 102 | 2 | 3 | 150 | 10 | 157 | 4.07e-23 | 89.4 |
| Msa1323080 | AT1G70870.1 | 35.099 | 151 | 85 | 4 | 1 | 151 | 1 | 138 | 1.41e-22 | 87.4 |
| Msa1323080 | AT5G28000.1 | 28.000 | 150 | 105 | 3 | 3 | 150 | 13 | 161 | 1.59e-20 | 82.8 |
| Msa1323080 | AT1G23120.1 | 27.083 | 144 | 100 | 3 | 7 | 150 | 7 | 145 | 2.98e-20 | 81.6 |
| Msa1323080 | AT1G70880.1 | 28.000 | 150 | 105 | 3 | 3 | 150 | 8 | 156 | 3.68e-20 | 81.6 |
| Msa1323080 | AT1G23120.2 | 27.083 | 144 | 100 | 3 | 7 | 150 | 57 | 195 | 1.16e-19 | 81.6 |
| Msa1323080 | AT1G14930.1 | 30.968 | 155 | 100 | 4 | 1 | 152 | 1 | 151 | 2.85e-19 | 79.3 |
| Msa1323080 | AT4G23670.1 | 30.968 | 155 | 100 | 4 | 1 | 152 | 1 | 151 | 7.26e-17 | 73.2 |
| Msa1323080 | AT2G01520.1 | 30.323 | 155 | 101 | 4 | 1 | 152 | 1 | 151 | 7.91e-17 | 72.8 |
| Msa1323080 | AT1G24020.1 | 30.065 | 153 | 103 | 3 | 1 | 151 | 1 | 151 | 1.17e-15 | 70.1 |
| Msa1323080 | AT1G24020.2 | 30.065 | 153 | 103 | 3 | 1 | 151 | 1 | 151 | 1.17e-15 | 70.1 |
| Msa1323080 | AT4G14060.1 | 30.323 | 155 | 101 | 4 | 1 | 152 | 1 | 151 | 3.80e-15 | 68.6 |
| Msa1323080 | AT1G35260.1 | 22.517 | 151 | 113 | 3 | 2 | 150 | 1 | 149 | 4.65e-15 | 68.6 |
| Msa1323080 | AT1G14940.1 | 28.477 | 151 | 105 | 3 | 1 | 150 | 1 | 149 | 7.11e-15 | 67.8 |
| Msa1323080 | AT4G23680.1 | 29.032 | 155 | 103 | 4 | 1 | 152 | 1 | 151 | 1.53e-14 | 67.0 |
| Msa1323080 | AT2G01530.1 | 29.032 | 155 | 103 | 4 | 1 | 152 | 1 | 151 | 1.73e-14 | 67.0 |
| Msa1323080 | AT1G14950.1 | 28.758 | 153 | 104 | 4 | 1 | 151 | 1 | 150 | 1.85e-13 | 64.3 |
| Msa1323080 | AT1G30990.1 | 25.828 | 151 | 108 | 4 | 1 | 150 | 1 | 148 | 1.21e-11 | 59.3 |
| Msa1323080 | AT1G14960.1 | 26.316 | 152 | 109 | 3 | 1 | 151 | 1 | 150 | 8.71e-11 | 57.0 |
| Msa1323080 | AT3G26450.1 | 26.282 | 156 | 107 | 5 | 1 | 152 | 1 | 152 | 9.01e-11 | 57.0 |
Find 29 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCTCTTCGGTGGAGATAT+TGG | 0.245046 | 8_4:-30984017 | Msa1323080:CDS |
| AGCTCTTCGGTGGAGATATT+GGG | 0.329670 | 8_4:-30984016 | Msa1323080:CDS |
| ATATTCAATTGTCCATTTGA+TGG | 0.352752 | 8_4:+30983932 | None:intergenic |
| GTCATCCCCTTGATGTAGCT+TGG | 0.401893 | 8_4:+30985528 | None:intergenic |
| AAACATTGGACTTATGTCAT+AGG | 0.403651 | 8_4:-30985484 | Msa1323080:intron |
| TAGAGATATTGATGCTCATC+TGG | 0.421031 | 8_4:-30983847 | Msa1323080:CDS |
| ATTCAAATAATTGATAATAG+TGG | 0.432059 | 8_4:-30983966 | Msa1323080:CDS |
| ACGTAGTCCATCCAGCCATT+AGG | 0.444330 | 8_4:+30983882 | None:intergenic |
| AGATATTGGGGAGAACTATA+AGG | 0.448937 | 8_4:-30984003 | Msa1323080:CDS |
| AGCTACATCAAGGGGATGAC+TGG | 0.453220 | 8_4:-30985525 | Msa1323080:CDS |
| GAGGATATTGACCCTCCTAA+TGG | 0.460289 | 8_4:-30983897 | Msa1323080:CDS |
| GCAGCAGTGCTGCCATCAAA+TGG | 0.475803 | 8_4:-30983944 | Msa1323080:CDS |
| GGTAAACTTAGTACTGAACT+TGG | 0.476618 | 8_4:-30985637 | Msa1323080:CDS |
| CTTCCAAGGATGGTGCTCAA+TGG | 0.508173 | 8_4:-30985658 | None:intergenic |
| AAACTCACTTACAAGCTCTT+CGG | 0.512951 | 8_4:-30984029 | Msa1323080:CDS |
| CATGAAACCAAGCTACATCA+AGG | 0.525025 | 8_4:-30985535 | Msa1323080:CDS |
| ATATTGACCCTCCTAATGGC+TGG | 0.525673 | 8_4:-30983893 | Msa1323080:CDS |
| TTTCATGAACTCTTTCACAA+TGG | 0.533960 | 8_4:+30985551 | None:intergenic |
| TAGTCCATCCAGCCATTAGG+AGG | 0.553714 | 8_4:+30983885 | None:intergenic |
| TGACCCTCCTAATGGCTGGA+TGG | 0.577019 | 8_4:-30983889 | Msa1323080:CDS |
| TGACTGGCATCACACTGATA+CGG | 0.601188 | 8_4:-30985509 | Msa1323080:CDS |
| GTAAACTTAGTACTGAACTT+GGG | 0.605653 | 8_4:-30985636 | Msa1323080:CDS |
| ACACTGATACGGTTAAACAT+TGG | 0.605669 | 8_4:-30985498 | Msa1323080:CDS |
| GCTCTTCGGTGGAGATATTG+GGG | 0.615379 | 8_4:-30984015 | Msa1323080:CDS |
| CTCACTTACAAGCTCTTCGG+TGG | 0.619750 | 8_4:-30984026 | Msa1323080:CDS |
| ATGAAACCAAGCTACATCAA+GGG | 0.623559 | 8_4:-30985534 | Msa1323080:CDS |
| TGAAACCAAGCTACATCAAG+GGG | 0.635241 | 8_4:-30985533 | Msa1323080:CDS |
| AGTCCATCCAGCCATTAGGA+GGG | 0.659406 | 8_4:+30983886 | None:intergenic |
| TGAATATGAGAAGATCAATG+AGG | 0.677949 | 8_4:-30983916 | Msa1323080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTCTAATTTTATCATTTT+GGG | + | chr8_4:30984282-30984301 | None:intergenic | 15.0% |
| !! | ACGTAAATTGTTAAAATAAA+AGG | + | chr8_4:30984356-30984375 | None:intergenic | 15.0% |
| !!! | TAAAATTACTTTAAAACAAC+TGG | - | chr8_4:30985187-30985206 | Msa1323080:intron | 15.0% |
| !! | AATTTAAGAACAATATTTGT+AGG | + | chr8_4:30985273-30985292 | None:intergenic | 15.0% |
| !!! | ATTCAAATAATTGATAATAG+TGG | - | chr8_4:30985519-30985538 | Msa1323080:CDS | 15.0% |
| !!! | CTTTCTAATTTTATCATTTT+GGG | + | chr8_4:30984282-30984301 | None:intergenic | 15.0% |
| !! | ACGTAAATTGTTAAAATAAA+AGG | + | chr8_4:30984356-30984375 | None:intergenic | 15.0% |
| !!! | TAAAATTACTTTAAAACAAC+TGG | - | chr8_4:30985187-30985206 | Msa1323080:intron | 15.0% |
| !! | AATTTAAGAACAATATTTGT+AGG | + | chr8_4:30985273-30985292 | None:intergenic | 15.0% |
| !!! | ATTCAAATAATTGATAATAG+TGG | - | chr8_4:30985519-30985538 | Msa1323080:CDS | 15.0% |
| !! | TATTCTAATTAAGGTCTTTA+AGG | - | chr8_4:30984228-30984247 | Msa1323080:intron | 20.0% |
| !!! | TAATTTTATCATTTTGGGAT+AGG | + | chr8_4:30984277-30984296 | None:intergenic | 20.0% |
| !!! | GCTTTCTAATTTTATCATTT+TGG | + | chr8_4:30984283-30984302 | None:intergenic | 20.0% |
| !! | ATTATTGAAAACGAAAGATA+AGG | + | chr8_4:30985321-30985340 | None:intergenic | 20.0% |
| !! | CATATGAAAATAAAATTGTG+TGG | + | chr8_4:30985353-30985372 | None:intergenic | 20.0% |
| !!! | CACACAATTTTATTTTCATA+TGG | - | chr8_4:30985351-30985370 | Msa1323080:intron | 20.0% |
| !! | TATTCTAATTAAGGTCTTTA+AGG | - | chr8_4:30984228-30984247 | Msa1323080:intron | 20.0% |
| !!! | TAATTTTATCATTTTGGGAT+AGG | + | chr8_4:30984277-30984296 | None:intergenic | 20.0% |
| !!! | GCTTTCTAATTTTATCATTT+TGG | + | chr8_4:30984283-30984302 | None:intergenic | 20.0% |
| !! | ATTATTGAAAACGAAAGATA+AGG | + | chr8_4:30985321-30985340 | None:intergenic | 20.0% |
| !! | CATATGAAAATAAAATTGTG+TGG | + | chr8_4:30985353-30985372 | None:intergenic | 20.0% |
| !!! | CACACAATTTTATTTTCATA+TGG | - | chr8_4:30985351-30985370 | Msa1323080:intron | 20.0% |
| !! | TACATGTACTATTTTATCGT+TGG | + | chr8_4:30984835-30984854 | None:intergenic | 25.0% |
| ! | CTTAAACTAGAAATCTGAAA+AGG | - | chr8_4:30985230-30985249 | Msa1323080:intron | 25.0% |
| ! | ATATTCAATTGTCCATTTGA+TGG | + | chr8_4:30985556-30985575 | None:intergenic | 25.0% |
| !! | TACATGTACTATTTTATCGT+TGG | + | chr8_4:30984835-30984854 | None:intergenic | 25.0% |
| ! | CTTAAACTAGAAATCTGAAA+AGG | - | chr8_4:30985230-30985249 | Msa1323080:intron | 25.0% |
| ! | ATATTCAATTGTCCATTTGA+TGG | + | chr8_4:30985556-30985575 | None:intergenic | 25.0% |
| ! | GTAAACTTAGTACTGAACTT+GGG | - | chr8_4:30983849-30983868 | Msa1323080:CDS | 30.0% |
| TTTCATGAACTCTTTCACAA+TGG | + | chr8_4:30983937-30983956 | None:intergenic | 30.0% | |
| AAACATTGGACTTATGTCAT+AGG | - | chr8_4:30984001-30984020 | Msa1323080:CDS | 30.0% | |
| ! | TTGATAGTAAGTAAACGTAG+AGG | + | chr8_4:30984327-30984346 | None:intergenic | 30.0% |
| !! | AGTGTTAACTTGTGTCTTTA+GGG | - | chr8_4:30984389-30984408 | Msa1323080:intron | 30.0% |
| ACAAGTTAACATTTCCCTTA+GGG | - | chr8_4:30984551-30984570 | Msa1323080:intron | 30.0% | |
| !!! | AGTCATGAGAATGACTTTTT+TGG | - | chr8_4:30984589-30984608 | Msa1323080:intron | 30.0% |
| ! | GATGAATTGATGATACTATG+AGG | + | chr8_4:30984690-30984709 | None:intergenic | 30.0% |
| CTTAAGTGTTACACTTTGTA+GGG | + | chr8_4:30984769-30984788 | None:intergenic | 30.0% | |
| TCTTAAGTGTTACACTTTGT+AGG | + | chr8_4:30984770-30984789 | None:intergenic | 30.0% | |
| AAACTTAGAGATCCAACTAA+GGG | + | chr8_4:30985004-30985023 | None:intergenic | 30.0% | |
| TAAACTTAGAGATCCAACTA+AGG | + | chr8_4:30985005-30985024 | None:intergenic | 30.0% | |
| !!! | GATTCTAGTGTGTTTTTTGA+AGG | - | chr8_4:30985121-30985140 | Msa1323080:intron | 30.0% |
| GTGAATAAGATTTGCAGAAT+CGG | - | chr8_4:30985150-30985169 | Msa1323080:intron | 30.0% | |
| AAAACAACTGGTACAAAACT+TGG | - | chr8_4:30985199-30985218 | Msa1323080:intron | 30.0% | |
| TGAATATGAGAAGATCAATG+AGG | - | chr8_4:30985569-30985588 | Msa1323080:CDS | 30.0% | |
| ! | GTAAACTTAGTACTGAACTT+GGG | - | chr8_4:30983849-30983868 | Msa1323080:CDS | 30.0% |
| TTTCATGAACTCTTTCACAA+TGG | + | chr8_4:30983937-30983956 | None:intergenic | 30.0% | |
| AAACATTGGACTTATGTCAT+AGG | - | chr8_4:30984001-30984020 | Msa1323080:CDS | 30.0% | |
| ! | TTGATAGTAAGTAAACGTAG+AGG | + | chr8_4:30984327-30984346 | None:intergenic | 30.0% |
| !! | AGTGTTAACTTGTGTCTTTA+GGG | - | chr8_4:30984389-30984408 | Msa1323080:intron | 30.0% |
| ACAAGTTAACATTTCCCTTA+GGG | - | chr8_4:30984551-30984570 | Msa1323080:intron | 30.0% | |
| !!! | AGTCATGAGAATGACTTTTT+TGG | - | chr8_4:30984589-30984608 | Msa1323080:intron | 30.0% |
| ! | GATGAATTGATGATACTATG+AGG | + | chr8_4:30984690-30984709 | None:intergenic | 30.0% |
| CTTAAGTGTTACACTTTGTA+GGG | + | chr8_4:30984769-30984788 | None:intergenic | 30.0% | |
| TCTTAAGTGTTACACTTTGT+AGG | + | chr8_4:30984770-30984789 | None:intergenic | 30.0% | |
| AAACTTAGAGATCCAACTAA+GGG | + | chr8_4:30985004-30985023 | None:intergenic | 30.0% | |
| TAAACTTAGAGATCCAACTA+AGG | + | chr8_4:30985005-30985024 | None:intergenic | 30.0% | |
| !!! | GATTCTAGTGTGTTTTTTGA+AGG | - | chr8_4:30985121-30985140 | Msa1323080:intron | 30.0% |
| GTGAATAAGATTTGCAGAAT+CGG | - | chr8_4:30985150-30985169 | Msa1323080:intron | 30.0% | |
| AAAACAACTGGTACAAAACT+TGG | - | chr8_4:30985199-30985218 | Msa1323080:intron | 30.0% | |
| TGAATATGAGAAGATCAATG+AGG | - | chr8_4:30985569-30985588 | Msa1323080:CDS | 30.0% | |
| ! | GGTAAACTTAGTACTGAACT+TGG | - | chr8_4:30983848-30983867 | Msa1323080:CDS | 35.0% |
| ATGAAACCAAGCTACATCAA+GGG | - | chr8_4:30983951-30983970 | Msa1323080:CDS | 35.0% | |
| ACACTGATACGGTTAAACAT+TGG | - | chr8_4:30983987-30984006 | Msa1323080:CDS | 35.0% | |
| ! | GCTTTTACATGTTCTCTTGT+TGG | - | chr8_4:30984301-30984320 | Msa1323080:intron | 35.0% |
| !! | CAGTGTTAACTTGTGTCTTT+AGG | - | chr8_4:30984388-30984407 | Msa1323080:intron | 35.0% |
| AATCATTACCTTGTGTCTTG+AGG | - | chr8_4:30984526-30984545 | Msa1323080:intron | 35.0% | |
| ATCATTACCTTGTGTCTTGA+GGG | - | chr8_4:30984527-30984546 | Msa1323080:intron | 35.0% | |
| GACAAGTTAACATTTCCCTT+AGG | - | chr8_4:30984550-30984569 | Msa1323080:intron | 35.0% | |
| TTCCCTTAGGGAAAATTCTA+TGG | - | chr8_4:30984563-30984582 | Msa1323080:intron | 35.0% | |
| ! | CACCATAGAATTTTCCCTAA+GGG | + | chr8_4:30984568-30984587 | None:intergenic | 35.0% |
| ! | TCACCATAGAATTTTCCCTA+AGG | + | chr8_4:30984569-30984588 | None:intergenic | 35.0% |
| ATGCCATTGTACAAATAGTG+GGG | + | chr8_4:30984655-30984674 | None:intergenic | 35.0% | |
| GATGCCATTGTACAAATAGT+GGG | + | chr8_4:30984656-30984675 | None:intergenic | 35.0% | |
| TGATGCCATTGTACAAATAG+TGG | + | chr8_4:30984657-30984676 | None:intergenic | 35.0% | |
| GTACAATGGCATCAAAAGTT+TGG | - | chr8_4:30984663-30984682 | Msa1323080:intron | 35.0% | |
| TGTTACGCTTATAACAAGGT+TGG | + | chr8_4:30984746-30984765 | None:intergenic | 35.0% | |
| AGTAATGCTTTGCAACATCT+TGG | + | chr8_4:30984861-30984880 | None:intergenic | 35.0% | |
| !!! | GTGTGTTTTTTGAAGGACTA+AGG | - | chr8_4:30985128-30985147 | Msa1323080:intron | 35.0% |
| AAACTCACTTACAAGCTCTT+CGG | - | chr8_4:30985456-30985475 | Msa1323080:intron | 35.0% | |
| AGATATTGGGGAGAACTATA+AGG | - | chr8_4:30985482-30985501 | Msa1323080:intron | 35.0% | |
| TAGAGATATTGATGCTCATC+TGG | - | chr8_4:30985638-30985657 | Msa1323080:CDS | 35.0% | |
| ! | GGTAAACTTAGTACTGAACT+TGG | - | chr8_4:30983848-30983867 | Msa1323080:CDS | 35.0% |
| ATGAAACCAAGCTACATCAA+GGG | - | chr8_4:30983951-30983970 | Msa1323080:CDS | 35.0% | |
| ACACTGATACGGTTAAACAT+TGG | - | chr8_4:30983987-30984006 | Msa1323080:CDS | 35.0% | |
| ! | GCTTTTACATGTTCTCTTGT+TGG | - | chr8_4:30984301-30984320 | Msa1323080:intron | 35.0% |
| !! | CAGTGTTAACTTGTGTCTTT+AGG | - | chr8_4:30984388-30984407 | Msa1323080:intron | 35.0% |
| AATCATTACCTTGTGTCTTG+AGG | - | chr8_4:30984526-30984545 | Msa1323080:intron | 35.0% | |
| ATCATTACCTTGTGTCTTGA+GGG | - | chr8_4:30984527-30984546 | Msa1323080:intron | 35.0% | |
| GACAAGTTAACATTTCCCTT+AGG | - | chr8_4:30984550-30984569 | Msa1323080:intron | 35.0% | |
| TTCCCTTAGGGAAAATTCTA+TGG | - | chr8_4:30984563-30984582 | Msa1323080:intron | 35.0% | |
| ! | CACCATAGAATTTTCCCTAA+GGG | + | chr8_4:30984568-30984587 | None:intergenic | 35.0% |
| ! | TCACCATAGAATTTTCCCTA+AGG | + | chr8_4:30984569-30984588 | None:intergenic | 35.0% |
| ATGCCATTGTACAAATAGTG+GGG | + | chr8_4:30984655-30984674 | None:intergenic | 35.0% | |
| GATGCCATTGTACAAATAGT+GGG | + | chr8_4:30984656-30984675 | None:intergenic | 35.0% | |
| TGATGCCATTGTACAAATAG+TGG | + | chr8_4:30984657-30984676 | None:intergenic | 35.0% | |
| GTACAATGGCATCAAAAGTT+TGG | - | chr8_4:30984663-30984682 | Msa1323080:intron | 35.0% | |
| TGTTACGCTTATAACAAGGT+TGG | + | chr8_4:30984746-30984765 | None:intergenic | 35.0% | |
| AGTAATGCTTTGCAACATCT+TGG | + | chr8_4:30984861-30984880 | None:intergenic | 35.0% | |
| !!! | GTGTGTTTTTTGAAGGACTA+AGG | - | chr8_4:30985128-30985147 | Msa1323080:intron | 35.0% |
| AAACTCACTTACAAGCTCTT+CGG | - | chr8_4:30985456-30985475 | Msa1323080:intron | 35.0% | |
| AGATATTGGGGAGAACTATA+AGG | - | chr8_4:30985482-30985501 | Msa1323080:intron | 35.0% | |
| TAGAGATATTGATGCTCATC+TGG | - | chr8_4:30985638-30985657 | Msa1323080:CDS | 35.0% | |
| CATGAAACCAAGCTACATCA+AGG | - | chr8_4:30983950-30983969 | Msa1323080:CDS | 40.0% | |
| TGAAACCAAGCTACATCAAG+GGG | - | chr8_4:30983952-30983971 | Msa1323080:CDS | 40.0% | |
| !! | GTCTTTAAGGAGTACTCAAG+AGG | - | chr8_4:30984241-30984260 | Msa1323080:intron | 40.0% |
| TCATTACCTTGTGTCTTGAG+GGG | - | chr8_4:30984528-30984547 | Msa1323080:intron | 40.0% | |
| ACACCCCACTATTTGTACAA+TGG | - | chr8_4:30984649-30984668 | Msa1323080:intron | 40.0% | |
| ! | AGGGTGTTACGCTTATAACA+AGG | + | chr8_4:30984750-30984769 | None:intergenic | 40.0% |
| TAGAGATCCAACTAAGGGAA+GGG | + | chr8_4:30984999-30985018 | None:intergenic | 40.0% | |
| TTAGAGATCCAACTAAGGGA+AGG | + | chr8_4:30985000-30985019 | None:intergenic | 40.0% | |
| CATGAAACCAAGCTACATCA+AGG | - | chr8_4:30983950-30983969 | Msa1323080:CDS | 40.0% | |
| TGAAACCAAGCTACATCAAG+GGG | - | chr8_4:30983952-30983971 | Msa1323080:CDS | 40.0% | |
| !! | GTCTTTAAGGAGTACTCAAG+AGG | - | chr8_4:30984241-30984260 | Msa1323080:intron | 40.0% |
| TCATTACCTTGTGTCTTGAG+GGG | - | chr8_4:30984528-30984547 | Msa1323080:intron | 40.0% | |
| ACACCCCACTATTTGTACAA+TGG | - | chr8_4:30984649-30984668 | Msa1323080:intron | 40.0% | |
| ! | AGGGTGTTACGCTTATAACA+AGG | + | chr8_4:30984750-30984769 | None:intergenic | 40.0% |
| TAGAGATCCAACTAAGGGAA+GGG | + | chr8_4:30984999-30985018 | None:intergenic | 40.0% | |
| TTAGAGATCCAACTAAGGGA+AGG | + | chr8_4:30985000-30985019 | None:intergenic | 40.0% | |
| TGACTGGCATCACACTGATA+CGG | - | chr8_4:30983976-30983995 | Msa1323080:CDS | 45.0% | |
| ! | CTACTAGTTTCTCCTCCTGA+AGG | - | chr8_4:30985026-30985045 | Msa1323080:intron | 45.0% |
| TGCCATCTGTTGTCATGTGA+CGG | + | chr8_4:30985386-30985405 | None:intergenic | 45.0% | |
| AAGCTCTTCGGTGGAGATAT+TGG | - | chr8_4:30985468-30985487 | Msa1323080:intron | 45.0% | |
| AGCTCTTCGGTGGAGATATT+GGG | - | chr8_4:30985469-30985488 | Msa1323080:intron | 45.0% | |
| GAGGATATTGACCCTCCTAA+TGG | - | chr8_4:30985588-30985607 | Msa1323080:CDS | 45.0% | |
| ATATTGACCCTCCTAATGGC+TGG | - | chr8_4:30985592-30985611 | Msa1323080:CDS | 45.0% | |
| TGACTGGCATCACACTGATA+CGG | - | chr8_4:30983976-30983995 | Msa1323080:CDS | 45.0% | |
| ! | CTACTAGTTTCTCCTCCTGA+AGG | - | chr8_4:30985026-30985045 | Msa1323080:intron | 45.0% |
| TGCCATCTGTTGTCATGTGA+CGG | + | chr8_4:30985386-30985405 | None:intergenic | 45.0% | |
| AAGCTCTTCGGTGGAGATAT+TGG | - | chr8_4:30985468-30985487 | Msa1323080:intron | 45.0% | |
| AGCTCTTCGGTGGAGATATT+GGG | - | chr8_4:30985469-30985488 | Msa1323080:intron | 45.0% | |
| GAGGATATTGACCCTCCTAA+TGG | - | chr8_4:30985588-30985607 | Msa1323080:CDS | 45.0% | |
| ATATTGACCCTCCTAATGGC+TGG | - | chr8_4:30985592-30985611 | Msa1323080:CDS | 45.0% | |
| !!! | AATTGAATTTAAAAATTTTT+AGG | + | chr8_4:30984105-30984124 | None:intergenic | 5.0% |
| !! | TATAAAAAATATTCTAATTA+AGG | - | chr8_4:30984219-30984238 | Msa1323080:intron | 5.0% |
| !!! | AATTGAATTTAAAAATTTTT+AGG | + | chr8_4:30984105-30984124 | None:intergenic | 5.0% |
| !! | TATAAAAAATATTCTAATTA+AGG | - | chr8_4:30984219-30984238 | Msa1323080:intron | 5.0% |
| GTCATCCCCTTGATGTAGCT+TGG | + | chr8_4:30983960-30983979 | None:intergenic | 50.0% | |
| AGCTACATCAAGGGGATGAC+TGG | - | chr8_4:30983960-30983979 | Msa1323080:CDS | 50.0% | |
| ACTTGTCCCCTCAAGACACA+AGG | + | chr8_4:30984537-30984556 | None:intergenic | 50.0% | |
| AGAAGCTCCCTTCCCTTAGT+TGG | - | chr8_4:30984989-30985008 | Msa1323080:intron | 50.0% | |
| TTTCTCCTCCTGAAGGTCTC+AGG | - | chr8_4:30985033-30985052 | Msa1323080:intron | 50.0% | |
| GAATCGAACCTGAGACCTTC+AGG | + | chr8_4:30985044-30985063 | None:intergenic | 50.0% | |
| TCCCGTCACATGACAACAGA+TGG | - | chr8_4:30985381-30985400 | Msa1323080:intron | 50.0% | |
| GCCATCTGTTGTCATGTGAC+GGG | + | chr8_4:30985385-30985404 | None:intergenic | 50.0% | |
| CTCACTTACAAGCTCTTCGG+TGG | - | chr8_4:30985459-30985478 | Msa1323080:intron | 50.0% | |
| GCTCTTCGGTGGAGATATTG+GGG | - | chr8_4:30985470-30985489 | Msa1323080:intron | 50.0% | |
| AGTCCATCCAGCCATTAGGA+GGG | + | chr8_4:30985602-30985621 | None:intergenic | 50.0% | |
| TAGTCCATCCAGCCATTAGG+AGG | + | chr8_4:30985603-30985622 | None:intergenic | 50.0% | |
| ACGTAGTCCATCCAGCCATT+AGG | + | chr8_4:30985606-30985625 | None:intergenic | 50.0% | |
| GTCATCCCCTTGATGTAGCT+TGG | + | chr8_4:30983960-30983979 | None:intergenic | 50.0% | |
| AGCTACATCAAGGGGATGAC+TGG | - | chr8_4:30983960-30983979 | Msa1323080:CDS | 50.0% | |
| ACTTGTCCCCTCAAGACACA+AGG | + | chr8_4:30984537-30984556 | None:intergenic | 50.0% | |
| AGAAGCTCCCTTCCCTTAGT+TGG | - | chr8_4:30984989-30985008 | Msa1323080:intron | 50.0% | |
| TTTCTCCTCCTGAAGGTCTC+AGG | - | chr8_4:30985033-30985052 | Msa1323080:intron | 50.0% | |
| GAATCGAACCTGAGACCTTC+AGG | + | chr8_4:30985044-30985063 | None:intergenic | 50.0% | |
| TCCCGTCACATGACAACAGA+TGG | - | chr8_4:30985381-30985400 | Msa1323080:intron | 50.0% | |
| GCCATCTGTTGTCATGTGAC+GGG | + | chr8_4:30985385-30985404 | None:intergenic | 50.0% | |
| CTCACTTACAAGCTCTTCGG+TGG | - | chr8_4:30985459-30985478 | Msa1323080:intron | 50.0% | |
| GCTCTTCGGTGGAGATATTG+GGG | - | chr8_4:30985470-30985489 | Msa1323080:intron | 50.0% | |
| AGTCCATCCAGCCATTAGGA+GGG | + | chr8_4:30985602-30985621 | None:intergenic | 50.0% | |
| TAGTCCATCCAGCCATTAGG+AGG | + | chr8_4:30985603-30985622 | None:intergenic | 50.0% | |
| ACGTAGTCCATCCAGCCATT+AGG | + | chr8_4:30985606-30985625 | None:intergenic | 50.0% | |
| GGAGCTTCTACAGTGCAGTC+AGG | + | chr8_4:30984978-30984997 | None:intergenic | 55.0% | |
| TCGAACCTGAGACCTTCAGG+AGG | + | chr8_4:30985041-30985060 | None:intergenic | 55.0% | |
| GCAGCAGTGCTGCCATCAAA+TGG | - | chr8_4:30985541-30985560 | Msa1323080:CDS | 55.0% | |
| TGACCCTCCTAATGGCTGGA+TGG | - | chr8_4:30985596-30985615 | Msa1323080:CDS | 55.0% | |
| GGAGCTTCTACAGTGCAGTC+AGG | + | chr8_4:30984978-30984997 | None:intergenic | 55.0% | |
| TCGAACCTGAGACCTTCAGG+AGG | + | chr8_4:30985041-30985060 | None:intergenic | 55.0% | |
| GCAGCAGTGCTGCCATCAAA+TGG | - | chr8_4:30985541-30985560 | Msa1323080:CDS | 55.0% | |
| TGACCCTCCTAATGGCTGGA+TGG | - | chr8_4:30985596-30985615 | Msa1323080:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 30983836 | 30985671 | 30983836 | ID=Msa1323080;Name=Msa1323080 |
| chr8_4 | mRNA | 30983836 | 30985671 | 30983836 | ID=Msa1323080-mRNA-1;Parent=Msa1323080;Name=Msa1323080-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|1|1|2|0|152 |
| chr8_4 | exon | 30985485 | 30985671 | 30985485 | ID=Msa1323080-mRNA-1:exon:10168;Parent=Msa1323080-mRNA-1 |
| chr8_4 | exon | 30983836 | 30984107 | 30983836 | ID=Msa1323080-mRNA-1:exon:10167;Parent=Msa1323080-mRNA-1 |
| chr8_4 | CDS | 30985485 | 30985671 | 30985485 | ID=Msa1323080-mRNA-1:cds;Parent=Msa1323080-mRNA-1 |
| chr8_4 | CDS | 30983836 | 30984107 | 30983836 | ID=Msa1323080-mRNA-1:cds;Parent=Msa1323080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
