AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0142270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0142270 MtrunA17_Chr4g0076491 97.458 708 16 1 1 708 1 706 0.0 1418
Msa0142270 MtrunA17_Chr6g0449741 90.216 695 35 5 15 708 4 666 0.0 1203
Msa0142270 MtrunA17_Chr7g0270131 40.783 434 234 6 251 681 194 607 6.34e-102 329
Msa0142270 MtrunA17_Chr3g0121351 40.972 432 231 6 272 692 128 546 1.02e-101 324
Msa0142270 MtrunA17_Chr2g0330401 41.371 423 226 5 262 682 69 471 2.20e-100 317
Msa0142270 MtrunA17_Chr3g0107851 43.069 404 192 7 273 663 101 479 1.01e-99 317
Msa0142270 MtrunA17_Chr1g0176041 39.294 453 243 8 246 686 115 547 8.65e-99 317
Msa0142270 MtrunA17_Chr6g0449911 41.446 415 218 5 270 681 146 538 1.27e-98 319
Msa0142270 MtrunA17_Chr2g0277821 40.326 429 232 5 257 681 472 880 1.28e-96 322
Msa0142270 MtrunA17_Chr4g0063551 36.923 455 261 7 243 685 95 535 1.23e-90 296
Msa0142270 MtrunA17_Chr1g0200181 36.449 428 247 4 262 682 118 527 1.79e-89 291
Msa0142270 MtrunA17_Chr1g0157691 36.111 432 243 6 262 682 120 529 7.23e-87 285
Msa0142270 MtrunA17_Chr2g0293631 38.657 432 239 6 269 697 476 884 8.74e-84 288
Msa0142270 MtrunA17_Chr7g0236841 36.364 385 221 3 287 670 8 369 1.27e-74 247
Msa0142270 MtrunA17_Chr4g0058591 37.838 370 208 5 259 626 172 521 2.38e-74 249
Msa0142270 MtrunA17_Chr6g0483491 36.364 385 221 3 287 670 8 369 2.99e-74 246
Msa0142270 MtrunA17_Chr5g0409981 36.855 407 225 6 286 683 101 484 6.19e-74 248
Msa0142270 MtrunA17_Chr3g0095031 40.806 397 195 9 295 675 96 468 7.40e-74 249
Msa0142270 MtrunA17_Chr5g0442191 39.782 367 192 7 295 656 87 429 4.21e-71 242
Msa0142270 MtrunA17_Chr3g0098121 36.148 379 216 4 289 663 152 508 7.03e-69 240
Msa0142270 MtrunA17_Chr6g0461751 31.765 425 257 8 269 685 121 520 4.34e-68 233
Msa0142270 MtrunA17_Chr4g0040761 35.476 389 225 5 295 680 25 390 6.61e-68 238
Msa0142270 MtrunA17_Chr7g0271121 38.032 376 188 8 295 656 112 456 1.26e-65 231
Msa0142270 MtrunA17_Chr2g0300291 36.031 383 212 6 289 663 141 498 2.65e-64 227
Msa0142270 MtrunA17_Chr1g0193491 37.802 373 190 7 297 656 122 465 5.58e-64 224
Msa0142270 MtrunA17_Chr7g0263771 33.570 423 250 9 264 681 105 501 1.01e-63 223
Msa0142270 MtrunA17_Chr7g0247221 31.948 385 236 3 295 679 149 507 9.75e-63 218
Msa0142270 MtrunA17_Chr7g0247191 31.948 385 236 4 295 679 156 514 1.75e-62 217
Msa0142270 MtrunA17_Chr7g0247181 31.948 385 236 3 295 679 146 504 1.86e-62 217
Msa0142270 MtrunA17_Chr2g0299681 33.254 421 234 7 256 666 17 400 3.29e-61 211
Msa0142270 MtrunA17_Chr2g0329931 34.301 379 217 7 295 669 47 397 7.17e-61 210
Msa0142270 MtrunA17_Chr4g0070981 34.286 385 209 7 295 666 47 400 8.36e-60 207
Msa0142270 MtrunA17_Chr8g0342861 31.050 438 261 7 249 682 10 410 1.51e-59 206
Msa0142270 MtrunA17_Chr2g0297261 30.390 385 242 4 285 668 30 389 9.77e-59 204
Msa0142270 MtrunA17_Chr7g0236831 32.339 436 245 9 289 674 163 598 1.07e-57 209
Msa0142270 MtrunA17_Chr2g0310581 32.737 391 226 7 289 670 53 415 4.03e-57 202
Msa0142270 MtrunA17_Chr4g0003441 34.501 371 204 6 295 656 114 454 1.93e-55 197
Msa0142270 MtrunA17_Chr3g0114081 33.943 383 211 9 295 655 22 384 1.32e-52 191
Msa0142270 MtrunA17_Chr6g0475251 36.313 358 183 9 313 654 127 455 1.71e-51 190
Msa0142270 MtrunA17_Chr1g0204391 34.694 392 197 10 294 654 49 412 3.46e-51 187
Msa0142270 MtrunA17_Chr1g0149251 34.006 347 189 7 327 663 2 318 1.59e-49 177
Msa0142270 MtrunA17_Chr8g0347171 31.762 403 237 11 292 678 163 543 1.83e-49 183
Msa0142270 MtrunA17_Chr8g0347161 31.818 396 230 10 300 678 113 485 3.94e-49 181
Msa0142270 MtrunA17_Chr8g0386451 28.713 404 248 8 292 678 291 671 2.52e-46 176
Msa0142270 MtrunA17_Chr8g0347151 30.348 402 244 9 292 678 204 584 3.53e-46 174
Msa0142270 MtrunA17_Chr4g0029191 27.896 423 243 9 304 668 60 478 2.42e-44 168
Msa0142270 MtrunA17_Chr4g0062301 29.921 381 227 10 301 668 109 462 8.94e-44 166
Msa0142270 MtrunA17_Chr2g0301281 28.502 414 226 10 304 655 57 462 3.21e-43 165
Msa0142270 MtrunA17_Chr2g0307471 30.435 391 233 9 289 667 91 454 3.06e-42 161
Msa0142270 MtrunA17_Chr5g0429221 29.834 362 229 5 287 645 1 340 4.95e-42 158
Msa0142270 MtrunA17_Chr2g0309551 28.085 470 271 10 257 670 67 525 1.97e-41 159
Msa0142270 MtrunA17_Chr6g0466611 29.487 390 243 7 295 670 148 519 2.82e-41 160
Msa0142270 MtrunA17_Chr5g0443991 30.270 370 223 9 308 667 95 439 7.66e-41 159
Msa0142270 MtrunA17_Chr1g0192021 27.804 428 244 7 288 670 25 432 4.18e-40 156
Msa0142270 MtrunA17_Chr4g0034411 29.255 376 230 10 314 679 101 450 2.78e-39 155
Msa0142270 MtrunA17_Chr1g0179761 28.861 395 230 12 289 656 80 450 6.53e-30 124
Msa0142270 MtrunA17_Chr4g0004301 26.329 414 246 10 295 656 35 441 2.69e-29 122
Msa0142270 MtrunA17_Chr8g0342851 27.324 355 202 7 318 669 2 303 1.48e-28 117
Msa0142270 MtrunA17_Chr5g0434301 26.087 414 247 10 295 656 35 441 4.81e-28 118
Msa0142270 MtrunA17_Chr3g0137901 43.165 139 78 1 526 663 16 154 5.42e-28 111
Msa0142270 MtrunA17_Chr4g0008541 71.831 71 20 0 151 221 52 122 8.06e-28 108
Msa0142270 MtrunA17_Chr1g0169331 25.641 390 221 9 307 656 9 369 2.18e-27 115
Msa0142270 MtrunA17_Chr8g0349951 36.875 160 93 2 285 443 6 158 5.08e-27 107
Msa0142270 MtrunA17_Chr4g0074521 26.420 405 242 13 283 657 76 454 1.13e-24 108
Msa0142270 MtrunA17_Chr4g0039471 31.081 222 125 4 289 507 223 419 1.26e-23 104
Msa0142270 MtrunA17_Chr4g0039471 28.729 181 79 4 289 467 2 134 4.44e-14 75.1
Msa0142270 MtrunA17_Chr3g0145781 24.870 386 248 14 287 647 130 498 2.22e-23 104
Msa0142270 MtrunA17_Chr4g0062321 25.969 258 163 7 370 622 1 235 5.03e-21 93.2
Msa0142270 MtrunA17_Chr1g0155201 26.761 284 158 9 404 677 1 244 2.02e-19 90.5
Msa0142270 MtrunA17_Chr4g0025141 35.897 117 65 1 550 656 82 198 5.20e-16 78.2
Msa0142270 MtrunA17_Chr8g0364251 30.208 192 114 8 289 466 91 276 5.64e-16 81.6
Msa0142270 MtrunA17_Chr8g0364251 40.196 102 60 1 555 656 439 539 1.11e-14 77.8
Msa0142270 MtrunA17_Chr3g0137891 28.571 189 107 5 327 512 2 165 2.09e-14 73.2
Msa0142270 MtrunA17_Chr8g0377041 22.977 383 245 15 298 670 266 608 1.41e-13 74.7
Msa0142270 MtrunA17_Chr0c30g0494091 29.348 184 103 5 283 452 76 246 2.40e-13 72.4
Msa0142270 MtrunA17_Chr8g0354761 30.370 135 88 2 524 655 228 359 3.54e-12 69.3
Msa0142270 MtrunA17_Chr4g0058601 41.791 67 39 0 616 682 9 75 2.33e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0142270 AT2G33730.1 87.648 591 73 0 116 706 141 731 0.0 1083
Msa0142270 AT1G28180.1 70.052 384 93 4 316 697 1 364 0.0 550
Msa0142270 AT3G58510.1 40.995 422 229 5 272 686 135 543 2.77e-104 331
Msa0142270 AT3G58510.3 40.995 422 229 5 272 686 135 543 2.77e-104 331
Msa0142270 AT3G58510.2 40.995 422 229 5 272 686 135 543 2.77e-104 331
Msa0142270 AT1G55150.1 40.667 450 241 6 259 702 70 499 8.12e-103 324
Msa0142270 AT5G63120.2 40.610 426 231 5 259 682 136 541 4.03e-102 325
Msa0142270 AT1G55150.2 40.940 447 238 6 262 702 98 524 8.09e-102 322
Msa0142270 AT2G42520.2 40.835 431 232 6 272 692 143 560 2.17e-101 324
Msa0142270 AT2G42520.1 40.835 431 232 6 272 692 143 560 2.17e-101 324
Msa0142270 AT2G42520.3 40.835 431 232 6 272 692 143 560 2.17e-101 324
Msa0142270 AT3G58570.1 41.038 424 228 4 272 686 130 540 8.53e-101 323
Msa0142270 AT2G47330.1 40.610 426 230 6 259 681 199 604 4.02e-99 322
Msa0142270 AT1G20920.4 39.627 429 235 5 257 681 498 906 9.24e-99 329
Msa0142270 AT1G20920.6 39.627 429 235 5 257 681 498 906 9.24e-99 329
Msa0142270 AT1G20920.3 39.627 429 235 5 257 681 498 906 9.24e-99 329
Msa0142270 AT1G20920.7 39.627 429 235 5 257 681 498 906 9.24e-99 329
Msa0142270 AT1G20920.5 39.627 429 235 5 257 681 498 906 9.24e-99 329
Msa0142270 AT1G20920.1 39.627 429 235 5 257 681 498 906 9.24e-99 329
Msa0142270 AT1G20920.2 39.052 443 244 6 243 681 148 568 2.35e-98 322
Msa0142270 AT5G14610.6 39.806 412 221 6 274 681 147 535 2.29e-91 298
Msa0142270 AT3G01540.4 39.173 411 225 5 274 681 144 532 2.35e-91 297
Msa0142270 AT3G01540.2 39.173 411 225 5 274 681 144 532 2.35e-91 297
Msa0142270 AT3G01540.3 39.173 411 225 5 274 681 144 532 2.35e-91 297
Msa0142270 AT5G14610.2 39.806 412 221 6 274 681 147 535 2.40e-91 298
Msa0142270 AT5G14610.5 39.806 412 221 6 274 681 155 543 2.84e-91 298
Msa0142270 AT3G01540.1 39.173 411 225 5 274 681 144 532 2.85e-91 297
Msa0142270 AT4G33370.1 36.818 440 247 6 254 682 61 480 2.16e-89 290
Msa0142270 AT5G51280.1 36.866 434 243 6 259 682 117 529 8.80e-88 287
Msa0142270 AT3G06480.1 38.221 416 232 5 269 681 416 809 3.58e-86 293
Msa0142270 AT5G14610.7 40.470 383 201 6 303 681 45 404 3.13e-84 275
Msa0142270 AT5G14610.3 40.470 383 201 6 303 681 45 404 3.13e-84 275
Msa0142270 AT3G09620.1 37.063 429 217 6 257 681 365 744 7.70e-84 286
Msa0142270 AT3G09620.2 37.063 429 217 6 257 681 366 745 9.84e-84 285
Msa0142270 AT5G14610.1 40.260 385 203 6 301 681 242 603 8.49e-83 277
Msa0142270 AT5G63120.1 39.554 359 195 5 259 615 136 474 1.70e-79 262
Msa0142270 AT5G63120.3 39.554 359 195 5 259 615 136 474 1.99e-79 262
Msa0142270 AT5G63120.4 39.554 359 195 5 259 615 136 474 1.99e-79 262
Msa0142270 AT5G63120.5 39.554 359 195 5 259 615 136 474 1.99e-79 262
Msa0142270 AT1G31970.1 38.575 407 217 8 287 683 115 498 4.83e-74 249
Msa0142270 AT5G60990.1 33.835 399 242 3 287 680 8 389 8.01e-72 241
Msa0142270 AT5G14610.4 37.714 350 193 5 274 620 155 482 1.65e-70 239
Msa0142270 AT3G02065.3 33.255 424 260 5 263 681 83 488 7.17e-70 237
Msa0142270 AT3G02065.2 33.255 424 260 5 263 681 83 488 7.17e-70 237
Msa0142270 AT4G16630.1 37.731 379 210 5 289 663 168 524 1.21e-67 238
Msa0142270 AT1G77030.1 34.961 389 227 5 295 680 35 400 1.14e-66 236
Msa0142270 AT3G22310.2 37.569 362 197 6 295 651 123 460 1.42e-66 231
Msa0142270 AT3G22310.1 37.569 362 197 6 295 651 123 460 1.93e-66 231
Msa0142270 AT3G06480.2 35.376 359 207 5 269 624 416 752 6.52e-66 233
Msa0142270 AT3G22330.1 38.017 363 200 8 292 651 108 448 1.07e-65 229
Msa0142270 AT4G00660.1 32.817 387 234 4 295 681 138 498 1.15e-65 226
Msa0142270 AT4G00660.2 32.817 387 234 4 295 681 138 498 1.15e-65 226
Msa0142270 AT2G45810.1 31.948 385 234 5 295 678 161 518 2.75e-63 220
Msa0142270 AT5G26742.1 40.107 374 191 9 293 656 105 455 4.56e-63 224
Msa0142270 AT5G26742.2 40.107 374 191 9 293 656 105 455 4.62e-63 224
Msa0142270 AT3G61240.2 31.443 388 238 5 295 681 131 491 7.32e-62 215
Msa0142270 AT3G61240.1 31.443 388 238 5 295 681 131 491 7.32e-62 215
Msa0142270 AT3G13920.1 32.737 391 233 5 295 682 46 409 9.45e-61 210
Msa0142270 AT3G13920.3 32.737 391 233 5 295 682 36 399 1.09e-60 209
Msa0142270 AT3G09720.2 32.391 460 274 13 256 704 106 539 1.26e-60 213
Msa0142270 AT3G09720.1 32.391 460 274 13 256 704 106 539 1.26e-60 213
Msa0142270 AT1G54270.1 33.929 392 227 5 295 682 46 409 1.59e-60 209
Msa0142270 AT3G13920.2 32.921 404 233 7 295 695 46 414 2.09e-60 209
Msa0142270 AT3G13920.5 32.921 404 233 7 295 695 50 418 2.36e-60 209
Msa0142270 AT1G72730.1 33.690 374 218 4 289 659 42 388 1.25e-59 207
Msa0142270 AT3G19760.1 30.729 384 240 4 286 668 33 391 2.63e-59 206
Msa0142270 AT3G13920.4 32.982 379 224 5 307 682 53 404 4.93e-59 205
Msa0142270 AT5G26742.3 39.942 343 175 8 317 651 38 357 5.34e-59 211
Msa0142270 AT1G16280.1 32.368 380 226 4 295 668 65 419 8.45e-59 207
Msa0142270 AT1G54270.2 34.877 367 207 5 307 669 53 391 1.38e-58 204
Msa0142270 AT1G51380.1 32.124 386 236 5 275 659 9 369 1.64e-58 203
Msa0142270 AT3G02065.1 33.333 369 225 4 316 681 1 351 8.27e-58 201
Msa0142270 AT1G28180.2 76.068 117 28 0 316 432 1 117 3.16e-57 190
Msa0142270 AT5G11170.1 33.594 384 215 7 295 668 53 406 3.93e-55 195
Msa0142270 AT5G11200.1 33.594 384 215 7 295 668 53 406 3.93e-55 195
Msa0142270 AT5G05450.1 34.190 389 207 12 291 655 19 382 5.21e-54 196
Msa0142270 AT1G71370.1 32.391 389 227 10 286 661 14 379 9.35e-53 192
Msa0142270 AT5G08620.1 31.951 410 239 11 295 688 87 472 3.17e-51 187
Msa0142270 AT5G63630.2 32.915 398 233 9 295 678 255 632 6.00e-51 189
Msa0142270 AT3G16840.2 30.612 441 255 10 289 679 192 631 7.76e-51 190
Msa0142270 AT3G16840.1 30.612 441 255 10 289 679 191 630 8.15e-51 190
Msa0142270 AT5G08610.1 31.000 400 240 9 295 679 389 767 1.05e-50 190
Msa0142270 AT5G62190.1 33.750 400 235 7 294 683 102 481 2.09e-50 187
Msa0142270 AT5G63630.1 32.915 398 233 9 295 678 61 438 5.13e-50 183
Msa0142270 AT5G11170.2 33.523 352 194 7 327 668 2 323 1.76e-48 174
Msa0142270 AT5G11200.3 30.353 425 215 8 295 668 53 447 2.69e-47 174
Msa0142270 AT2G40700.1 27.706 462 259 11 291 683 37 492 7.62e-46 173
Msa0142270 AT3G18600.1 31.880 367 221 6 295 655 96 439 8.29e-46 172
Msa0142270 AT5G11200.2 32.000 425 226 13 295 668 53 465 1.16e-45 170
Msa0142270 AT5G65900.1 30.390 385 242 7 288 667 154 517 6.30e-45 171
Msa0142270 AT2G07750.1 29.630 405 249 11 292 681 379 762 8.98e-43 166
Msa0142270 AT1G63250.1 30.073 409 242 11 292 681 332 715 1.57e-42 166
Msa0142270 AT4G09730.1 28.788 396 259 7 272 659 99 479 9.61e-41 158
Msa0142270 AT5G54910.1 28.502 414 259 11 287 687 70 459 3.93e-40 158
Msa0142270 AT1G12770.2 27.765 443 264 11 279 676 98 529 6.56e-39 152
Msa0142270 AT1G12770.1 27.765 443 264 11 279 676 98 529 6.56e-39 152
Msa0142270 AT4G34910.1 28.713 404 223 8 288 645 46 430 3.16e-36 145
Msa0142270 AT3G53110.1 30.952 378 220 12 295 655 98 451 4.02e-36 143
Msa0142270 AT1G71280.1 29.714 350 184 10 286 623 15 314 4.46e-36 142
Msa0142270 AT1G71280.2 29.805 359 188 11 286 632 15 321 5.33e-36 139
Msa0142270 AT4G15850.1 27.064 436 260 9 295 679 38 466 5.74e-32 131
Msa0142270 AT1G59990.1 26.141 482 261 17 289 683 81 554 3.72e-30 126
Msa0142270 AT1G59990.2 26.141 482 261 17 289 683 81 554 5.72e-30 125
Msa0142270 AT1G51380.2 28.028 289 182 5 275 562 9 272 5.51e-26 108
Msa0142270 AT5G19210.2 25.510 392 246 10 277 644 65 434 7.18e-26 112
Msa0142270 AT3G06980.1 23.604 394 255 11 288 655 374 747 3.57e-23 105
Msa0142270 AT1G51380.4 28.099 242 149 4 275 516 9 225 6.53e-23 100
Msa0142270 AT1G51380.3 28.099 242 149 4 275 516 9 225 8.37e-23 100
Msa0142270 AT5G19210.1 26.016 246 150 7 417 644 46 277 1.50e-13 72.8
Msa0142270 AT5G19210.3 26.016 246 150 7 417 644 46 277 1.50e-13 72.8
Msa0142270 AT1G27880.1 24.138 377 231 15 307 669 266 601 5.33e-12 70.1
Msa0142270 AT3G05740.2 23.177 384 233 13 307 670 118 459 7.40e-12 68.9
Msa0142270 AT1G27880.2 24.138 377 231 15 307 669 266 601 8.10e-12 69.3
Msa0142270 AT3G05740.1 23.611 360 216 12 307 646 203 523 9.02e-12 68.9

Find 205 sgRNAs with CRISPR-Local

Find 438 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAGGGATTGGCGTATATTT+AGG 0.151902 1_4:-1172931 Msa0142270:CDS
AGATTATAACATTTCTTATA+AGG 0.211970 1_4:-1172906 Msa0142270:CDS
GGCGTTGCTGAGACCGGTTC+TGG 0.212646 1_4:-1172734 Msa0142270:CDS
AATAGATCCTGGCTTGAATT+TGG 0.231521 1_4:+1171662 None:intergenic
AGATTAGTCTTGAAGGATTT+AGG 0.252142 1_4:-1171950 Msa0142270:CDS
TTGATGAGAAGAGGATTTAT+AGG 0.256546 1_4:-1172283 Msa0142270:CDS
GGTTAAATTTGCTCAGTATA+TGG 0.266751 1_4:-1172570 Msa0142270:CDS
GGGATAGCGGTGGCGGGGAC+GGG 0.280350 1_4:+1173694 None:intergenic
AAGAAAATCAGCGCTCTTCT+TGG 0.298072 1_4:+1172043 None:intergenic
GGATAGCGGTGGCGGGGACG+GGG 0.299719 1_4:+1173695 None:intergenic
GCTTCATGCCTTGCCAATTC+AGG 0.302855 1_4:+1171687 None:intergenic
GCGGTCGGAATCGGAAGGTT+TGG 0.311363 1_4:+1173540 None:intergenic
GAGGGATTGGCGTATATTTA+GGG 0.311480 1_4:-1172930 Msa0142270:CDS
CCTCATAGGCCTTGGAATCT+TGG 0.328857 1_4:+1172880 None:intergenic
TTTGGTGAGGAATACTGGTT+TGG 0.330767 1_4:+1173672 None:intergenic
ATTAAAGTTGTTTCCATTGT+TGG 0.333853 1_4:-1172545 Msa0142270:CDS
GCTTCATTCTCCTCACTAAT+AGG 0.335027 1_4:+1172659 None:intergenic
CGGTCGGAATCGGAAGGTTT+GGG 0.342546 1_4:+1173541 None:intergenic
GAAACGACCCACTGATGAAT+TGG 0.345298 1_4:-1173719 Msa0142270:CDS
TTGGTGAGGAATACTGGTTT+GGG 0.347969 1_4:+1173673 None:intergenic
TGGTTTGGGGATAGCGGTGG+CGG 0.348580 1_4:+1173687 None:intergenic
GTTAAATTTGCTCAGTATAT+GGG 0.349756 1_4:-1172569 Msa0142270:CDS
AGTTCCTCATCTTCATTCTC+TGG 0.351472 1_4:+1172305 None:intergenic
GGGGATAGCGGTGGCGGGGA+CGG 0.352952 1_4:+1173693 None:intergenic
ACAGAGAACGAGAAAGAGAT+AGG 0.359845 1_4:-1173471 Msa0142270:CDS
GATTATAACATTTCTTATAA+GGG 0.361994 1_4:-1172905 Msa0142270:CDS
TGGGCTTTGGTGAGGAATAC+TGG 0.364729 1_4:+1173667 None:intergenic
AAAGGAGCTTGAATCGATTA+AGG 0.369624 1_4:-1173326 Msa0142270:CDS
GGGTCCTTATGCTGTTGTTA+TGG 0.372233 1_4:-1172633 Msa0142270:CDS
GGCTGATCGTATGATTGATA+TGG 0.372547 1_4:-1172384 Msa0142270:CDS
CTTATGATACGTTTGATATG+AGG 0.372751 1_4:-1172997 Msa0142270:CDS
TGGAAAGGAGAAGTTCTTCT+TGG 0.373195 1_4:+1173587 None:intergenic
TTCATCAGTGGGTCGTTTCA+TGG 0.379471 1_4:+1173723 None:intergenic
GATAGCGGTGGCGGGGACGG+GGG 0.381133 1_4:+1173696 None:intergenic
CCTCATCTCTTTCTCGTGCT+TGG 0.383126 1_4:+1173102 None:intergenic
GGAGGAGCGGTTGTTGTTGT+TGG 0.385706 1_4:+1173567 None:intergenic
ATATGAGGGTTGATCGTCAT+TGG 0.389716 1_4:-1172982 Msa0142270:CDS
TGGTCGTTTGATTGATTGCT+TGG 0.389906 1_4:-1172456 Msa0142270:CDS
CTTCAGCAGCGCGATGTTAT+CGG 0.392814 1_4:-1172755 Msa0142270:CDS
CAGTCCTGTTCCACCTGAAT+TGG 0.392949 1_4:-1171700 Msa0142270:CDS
CCTCAAGAAAATTCTCTAAT+GGG 0.393770 1_4:+1171602 None:intergenic
CTTGTTGCAACTGATGTTGC+TGG 0.393795 1_4:-1171909 Msa0142270:CDS
TACAACATTCCTGACTCTTC+AGG 0.394751 1_4:-1171769 Msa0142270:CDS
AAATGTACACCCATCGTATT+GGG 0.397102 1_4:-1171824 Msa0142270:CDS
AGCTCGTGAACGTGCTCGAT+TGG 0.410786 1_4:-1173374 Msa0142270:CDS
GTACCTATAGTCACGACAAC+AGG 0.415743 1_4:+1172191 None:intergenic
GGGGTTTGAGCCGCAGGTCA+TGG 0.418088 1_4:-1172363 Msa0142270:CDS
CTTAAACCCTTGCTCCTCAA+TGG 0.420410 1_4:+1172514 None:intergenic
ACCCAACTCCTCATAGGCCT+TGG 0.421483 1_4:+1172872 None:intergenic
CCGCTGAGCATCAGCCTCCT+CGG 0.422813 1_4:+1173042 None:intergenic
AAGAGATGAGGGATCAGATT+AGG 0.424114 1_4:-1173090 Msa0142270:CDS
GAAATGTACACCCATCGTAT+TGG 0.424823 1_4:-1171825 Msa0142270:CDS
CGCTGAGCATCAGCCTCCTC+GGG 0.425110 1_4:+1173043 None:intergenic
CTTGCCAATTCAGGTGGAAC+AGG 0.427377 1_4:+1171696 None:intergenic
TTCTTGGTCGCGTTTGTGAC+CGG 0.430604 1_4:+1173603 None:intergenic
TCTGGTTTGAGATTACTAGA+AGG 0.435140 1_4:+1172323 None:intergenic
GTTTGGGGATAGCGGTGGCG+GGG 0.435804 1_4:+1173689 None:intergenic
GAGTGCTTGTTGTTCACGTT+GGG 0.436602 1_4:+1173648 None:intergenic
AACAAGCACATTATATCTCT+TGG 0.438220 1_4:+1171926 None:intergenic
GAGGGATCAGATTAGGAAGA+AGG 0.440776 1_4:-1173083 Msa0142270:CDS
TGATATGGGGTTTGAGCCGC+AGG 0.441038 1_4:-1172369 Msa0142270:CDS
CGCAGCAGTCTTCCCAGAAC+CGG 0.444110 1_4:+1172721 None:intergenic
GTTATCAACTATGATATGCC+TGG 0.451885 1_4:-1171855 Msa0142270:CDS
GGTTTGGGGATAGCGGTGGC+GGG 0.455601 1_4:+1173688 None:intergenic
TTATAAGCTTCAGAGATTGT+TGG 0.455794 1_4:-1172105 Msa0142270:CDS
AGGAAATGACCGAGAGGGAT+TGG 0.456302 1_4:-1172943 Msa0142270:CDS
GCGTTGCTGAGACCGGTTCT+GGG 0.458342 1_4:-1172733 Msa0142270:CDS
ACGATCGCGGCGGTCGGAAT+CGG 0.459745 1_4:+1173531 None:intergenic
CTATGTTGAGTTATATCACT+AGG 0.463930 1_4:-1172688 Msa0142270:CDS
TTGTTGTTCACGTTGGGCTT+TGG 0.464102 1_4:+1173654 None:intergenic
TTCCAAGGCCTATGAGGAGT+TGG 0.472890 1_4:-1172874 Msa0142270:CDS
CAGAGGGAGATTAGTCTTGA+AGG 0.474519 1_4:-1171957 Msa0142270:CDS
ACGAGAAAGAGATAGGGAAA+GGG 0.477539 1_4:-1173464 Msa0142270:CDS
CGAGTGCTTGTTGTTCACGT+TGG 0.479724 1_4:+1173647 None:intergenic
AACCCTGTTGTCGTGACTAT+AGG 0.480050 1_4:-1172194 Msa0142270:CDS
GGGTTTGAGCCGCAGGTCAT+GGG 0.480370 1_4:-1172362 Msa0142270:CDS
AGCGGTTGTTGTTGTTGGAA+AGG 0.482316 1_4:+1173572 None:intergenic
CTCTCAACCCAACTCCTCAT+AGG 0.482587 1_4:+1172866 None:intergenic
GCAAGGGTTTAAGATAAGAC+AGG 0.485716 1_4:-1172504 Msa0142270:CDS
CCGAGGGTTTAGAGCTGGAA+TGG 0.485919 1_4:-1173152 Msa0142270:CDS
CAGATGGCTGCTATTCCGCT+TGG 0.486395 1_4:-1172779 Msa0142270:CDS
TGCTCAGCGGCGTAAGGAGG+AGG 0.486502 1_4:-1173029 Msa0142270:CDS
TCCAAGGCCTATGAGGAGTT+GGG 0.486930 1_4:-1172873 Msa0142270:CDS
GGCTTGCTAGAAAGTATTTG+AGG 0.491288 1_4:-1172217 Msa0142270:CDS
GGCTGATGCTCAGCGGCGTA+AGG 0.492621 1_4:-1173035 Msa0142270:CDS
GAAAATCGAAATTTCTCACT+AGG 0.493364 1_4:+1173259 None:intergenic
AACGAGAAAGAGATAGGGAA+AGG 0.494581 1_4:-1173465 Msa0142270:CDS
CCAAGATTCCAAGGCCTATG+AGG 0.495513 1_4:-1172880 Msa0142270:CDS
GCTGATCGTATGATTGATAT+GGG 0.495582 1_4:-1172383 Msa0142270:CDS
TTGATAACATGAGCCACATC+AGG 0.497781 1_4:+1171870 None:intergenic
TTGAAGGCTGTGGAGAAGGC+AGG 0.498092 1_4:-1172824 Msa0142270:CDS
ACCCATCGTATTGGGCGTAC+TGG 0.502956 1_4:-1171816 Msa0142270:CDS
CGAGCTTGCTCAGCAGATTG+AGG 0.503683 1_4:-1172600 Msa0142270:CDS
TTTGGCCGAGGGTTTAGAGC+TGG 0.505228 1_4:-1173157 Msa0142270:CDS
TGCTACCATGCCTCCTGCGG+TGG 0.509902 1_4:-1172243 Msa0142270:CDS
GGAATAGCAGCCATCTGAAT+GGG 0.513142 1_4:+1172785 None:intergenic
CGGAATAGCAGCCATCTGAA+TGG 0.513321 1_4:+1172784 None:intergenic
ACTGGTCGTGCAGGAAAGAC+GGG 0.515003 1_4:-1171798 Msa0142270:CDS
CATCAGTGTCCTGAAGAGTC+AGG 0.517770 1_4:+1171760 None:intergenic
CCATGCCTCCTGCGGTGGAG+AGG 0.521827 1_4:-1172238 Msa0142270:CDS
TACTGGTCGTGCAGGAAAGA+CGG 0.523897 1_4:-1171799 Msa0142270:CDS
ATTTCGCCTAGGTGGTCTGT+CGG 0.525141 1_4:+1171638 None:intergenic
TAGGAAGAAGGATGGTGTGG+AGG 0.525902 1_4:-1173071 Msa0142270:CDS
GTTATCGGCGTTGCTGAGAC+CGG 0.527614 1_4:-1172740 Msa0142270:CDS
GGTCTGTCGGGAATAGATCC+TGG 0.531479 1_4:+1171651 None:intergenic
ATGAGGAACTTGATGAGAAG+AGG 0.531706 1_4:-1172292 Msa0142270:CDS
GGTGCCATAACAACAGCATA+AGG 0.532681 1_4:+1172629 None:intergenic
GCTAAGAATTTGGACAAGGA+AGG 0.533137 1_4:-1172020 Msa0142270:CDS
TTTCGCCTAGGTGGTCTGTC+GGG 0.533463 1_4:+1171639 None:intergenic
GCAACTGATGTTGCTGGACG+TGG 0.534104 1_4:-1171903 Msa0142270:CDS
CATCTCTTTCTCGTGCTTGG+CGG 0.534514 1_4:+1173105 None:intergenic
CTTTCATCATGATCACATGC+TGG 0.534873 1_4:+1172141 None:intergenic
TGCGGAACGAGAACGTGAAA+AGG 0.537366 1_4:-1173344 Msa0142270:CDS
ATTGGGCGTACTGGTCGTGC+AGG 0.537891 1_4:-1171807 Msa0142270:CDS
GCGTGACTACTTTGCATGGA+GGG 0.540698 1_4:-1171992 Msa0142270:CDS
CTAGCAAGCCTCTCCACCGC+AGG 0.541300 1_4:+1172230 None:intergenic
TGCTGAGCAAGCTCGCGAGT+CGG 0.542852 1_4:+1172608 None:intergenic
CAGCCATCTGAATGGGAGAA+GGG 0.544407 1_4:+1172792 None:intergenic
TTAAATTTGCTCAGTATATG+GGG 0.545312 1_4:-1172568 Msa0142270:CDS
CGGCAAGCTTCTTCTGCTCA+CGG 0.545361 1_4:+1173125 None:intergenic
AATGGACTGACCACCAACAA+TGG 0.547761 1_4:+1172532 None:intergenic
TGTTGGTGGTCAGTCCATTG+AGG 0.549272 1_4:-1172528 Msa0142270:CDS
GTCGTGACTATAGGTACTGC+TGG 0.550829 1_4:-1172185 Msa0142270:CDS
CCTCTCCACCGCAGGAGGCA+TGG 0.551441 1_4:+1172238 None:intergenic
GTCAGTCCATTGAGGAGCAA+GGG 0.551504 1_4:-1172520 Msa0142270:CDS
TTATGATACGTTTGATATGA+GGG 0.551866 1_4:-1172996 Msa0142270:CDS
TATCGCGTGACTACTTTGCA+TGG 0.553463 1_4:-1171996 Msa0142270:CDS
CAGAGAACGAGAAAGAGATA+GGG 0.554136 1_4:-1173470 Msa0142270:CDS
GATCAGATTAGGAAGAAGGA+TGG 0.554146 1_4:-1173079 Msa0142270:CDS
AAAGTTGTTTCCATTGTTGG+TGG 0.555528 1_4:-1172542 Msa0142270:CDS
GTGTACATTTCAATATTCCC+AGG 0.556474 1_4:+1171837 None:intergenic
GCAAGCCTCTCCACCGCAGG+AGG 0.558194 1_4:+1172233 None:intergenic
ACGGTCACGATCGCGGCGGT+CGG 0.560584 1_4:+1173525 None:intergenic
TTATCAACTATGATATGCCT+GGG 0.566309 1_4:-1171854 Msa0142270:CDS
GAAATTGTGATTGCGACTCC+TGG 0.569519 1_4:-1172476 Msa0142270:CDS
CGCCGCCACAATCAAGTCGC+CGG 0.570411 1_4:-1173622 Msa0142270:CDS
ATAAGGGTTCCAAGATTCCA+AGG 0.571931 1_4:-1172889 Msa0142270:CDS
ATCGGAAGGTTTGGGATCGG+AGG 0.574487 1_4:+1173549 None:intergenic
ACCAGTACGCCCAATACGAT+GGG 0.574501 1_4:+1171815 None:intergenic
GCCGCAGGTCATGGGTGTGT+TGG 0.578251 1_4:-1172354 Msa0142270:CDS
GCAGCCATCTGAATGGGAGA+AGG 0.578307 1_4:+1172791 None:intergenic
TCATGCCTTGCCAATTCAGG+TGG 0.578546 1_4:+1171690 None:intergenic
AAATATACGCCAATCCCTCT+CGG 0.583923 1_4:+1172934 None:intergenic
GAAGCTTCCAAATTCAAGCC+AGG 0.584125 1_4:-1171669 Msa0142270:CDS
GAGGGAAATCACAGGATCAG+AGG 0.584484 1_4:-1171974 Msa0142270:CDS
AAGGTTTGGGATCGGAGGAG+CGG 0.584503 1_4:+1173554 None:intergenic
GGTCAGTCCATTGAGGAGCA+AGG 0.586693 1_4:-1172521 Msa0142270:CDS
AACTGTCTCGATCGTGACCA+CGG 0.588393 1_4:+1173500 None:intergenic
CACGGTCACGGTCACGATCG+CGG 0.590545 1_4:+1173518 None:intergenic
GACCAGTACGCCCAATACGA+TGG 0.591341 1_4:+1171814 None:intergenic
AACCCCTTCTCCCATTCAGA+TGG 0.591572 1_4:-1172795 Msa0142270:CDS
TGTGACCGGCGACTTGATTG+TGG 0.592023 1_4:+1173617 None:intergenic
TCGTGCAGGAAAGACGGGTG+TGG 0.592030 1_4:-1171793 Msa0142270:CDS
GATTAGGAAGAAGGATGGTG+TGG 0.593928 1_4:-1173074 Msa0142270:CDS
TCATTCTCCTCACTAATAGG+AGG 0.596345 1_4:+1172662 None:intergenic
CTCGATCGTGACCACGGTCA+CGG 0.597771 1_4:+1173506 None:intergenic
TACTGGTTTGGGGATAGCGG+TGG 0.599779 1_4:+1173684 None:intergenic
TGATGCTCAGCGGCGTAAGG+AGG 0.601003 1_4:-1173032 Msa0142270:CDS
AAAAGAAGCTGAGCTTCATG+AGG 0.602412 1_4:+1173178 None:intergenic
CTAGTGATATAACTCAACAT+AGG 0.604406 1_4:+1172689 None:intergenic
CCATTCCAGCTCTAAACCCT+CGG 0.605302 1_4:+1173152 None:intergenic
CTGTTCCACCTGAATTGGCA+AGG 0.607946 1_4:-1171695 Msa0142270:CDS
TGGTGAGGAATACTGGTTTG+GGG 0.607986 1_4:+1173674 None:intergenic
TAATTATGTTGTTCTTGATG+AGG 0.610318 1_4:-1172405 Msa0142270:CDS
CAAGGGTTTAAGATAAGACA+GGG 0.610952 1_4:-1172503 Msa0142270:CDS
AGGGAAATCACAGGATCAGA+GGG 0.612491 1_4:-1171973 Msa0142270:CDS
TCGCGGCGGTCGGAATCGGA+AGG 0.612857 1_4:+1173535 None:intergenic
CAAGCACGAGAAAGAGATGA+GGG 0.613888 1_4:-1173101 Msa0142270:CDS
CGCGATCGTGACCGTGACCG+TGG 0.617023 1_4:-1173517 Msa0142270:CDS
GAATACTGGTTTGGGGATAG+CGG 0.618890 1_4:+1173681 None:intergenic
TAGTGAGGAGAATGAAGCTG+AGG 0.619427 1_4:-1172654 Msa0142270:CDS
TTGCTTGGAGCGTCGCTATG+CGG 0.622750 1_4:-1172441 Msa0142270:CDS
TGGTGTGGAGGAGAAGCCCG+AGG 0.624682 1_4:-1173059 Msa0142270:CDS
TCCAACACACCCATGACCTG+CGG 0.624778 1_4:+1172353 None:intergenic
AAAGAAGCTGAGCTTCATGA+GGG 0.625643 1_4:+1173179 None:intergenic
TTTGCATGGAGGGAAATCAC+AGG 0.625882 1_4:-1171982 Msa0142270:CDS
CGCGTGACTACTTTGCATGG+AGG 0.626285 1_4:-1171993 Msa0142270:CDS
AAAACAGTGTCATTTCGCCT+AGG 0.628001 1_4:+1171627 None:intergenic
CCAAGCACGAGAAAGAGATG+AGG 0.628079 1_4:-1173102 Msa0142270:CDS
CAAACCAGAGAATGAAGATG+AGG 0.629792 1_4:-1172309 Msa0142270:CDS
AGTGAGGAGAATGAAGCTGA+GGG 0.635359 1_4:-1172653 Msa0142270:CDS
AAGCAATCAATCAAACGACC+AGG 0.636109 1_4:+1172458 None:intergenic
AGCCATCTGAATGGGAGAAG+GGG 0.636200 1_4:+1172793 None:intergenic
CAGTGCTACCATGCCTCCTG+CGG 0.636466 1_4:-1172246 Msa0142270:CDS
TGCTCGATTGGAGAAGCTTG+CGG 0.638934 1_4:-1173362 Msa0142270:CDS
TCAGCAGATTGAGGATGAGA+CGG 0.638997 1_4:-1172591 Msa0142270:CDS
TCGATTAAGGAACAATACCT+AGG 0.640164 1_4:-1173313 Msa0142270:CDS
ACAGTGTCATTTCGCCTAGG+TGG 0.641491 1_4:+1171630 None:intergenic
TCTTGCTAAGAATTTGGACA+AGG 0.643179 1_4:-1172024 Msa0142270:CDS
GTTCACGTTGGGCTTTGGTG+AGG 0.643761 1_4:+1173659 None:intergenic
TTGGAGTGAGAAGAAGCTTG+AGG 0.645359 1_4:-1172963 Msa0142270:CDS
GCTTGAGGAAATGACCGAGA+GGG 0.646556 1_4:-1172948 Msa0142270:CDS
TGGTATTGACATTCCTGATG+TGG 0.647427 1_4:-1171883 Msa0142270:CDS
TACCTATAGTCACGACAACA+GGG 0.648496 1_4:+1172192 None:intergenic
CTTCTTCACGTTCTTTATCG+CGG 0.650719 1_4:+1173404 None:intergenic
GGAATCGGAAGGTTTGGGAT+CGG 0.661284 1_4:+1173546 None:intergenic
CCGAGGAGGCTGATGCTCAG+CGG 0.665561 1_4:-1173042 Msa0142270:CDS
TAGGCTTCCTCCTATTAGTG+AGG 0.666705 1_4:-1172669 Msa0142270:CDS
CTGATCGTATGATTGATATG+GGG 0.672880 1_4:-1172382 Msa0142270:CDS
TCGCGCTGCTGAAGTCCAAG+CGG 0.697186 1_4:+1172764 None:intergenic
CTATTCCCGACAGACCACCT+AGG 0.700511 1_4:-1171644 Msa0142270:CDS
AGCTTGAGGAAATGACCGAG+AGG 0.702757 1_4:-1172949 Msa0142270:CDS
TGTGGAGGAGAAGCCCGAGG+AGG 0.708475 1_4:-1173056 Msa0142270:CDS
GACCGGCGACTTGATTGTGG+CGG 0.719948 1_4:+1173620 None:intergenic
GGTCACGGTCACGATCGCGG+CGG 0.799686 1_4:+1173521 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCAAAAAAACCTAAAAAAA+GGG - chr1_4:1172048-1172067 Msa0142270:CDS 15.0%
!! AGATTATAACATTTCTTATA+AGG - chr1_4:1172432-1172451 Msa0142270:CDS 15.0%
!! GATTATAACATTTCTTATAA+GGG - chr1_4:1172433-1172452 Msa0142270:CDS 15.0%
!! TTCAAAAAAACCTAAAAAAA+GGG - chr1_4:1172048-1172067 Msa0142270:CDS 15.0%
!! AGATTATAACATTTCTTATA+AGG - chr1_4:1172432-1172451 Msa0142270:CDS 15.0%
!! GATTATAACATTTCTTATAA+GGG - chr1_4:1172433-1172452 Msa0142270:CDS 15.0%
!! GTTCAAAAAAACCTAAAAAA+AGG - chr1_4:1172047-1172066 Msa0142270:CDS 20.0%
!! GTTCAAAAAAACCTAAAAAA+AGG - chr1_4:1172047-1172066 Msa0142270:CDS 20.0%
!!! TTTTAGGTTTTTTTGAACCT+AGG + chr1_4:1172045-1172064 None:intergenic 25.0%
!!! GGTTTAATAACCCTTTTTTT+AGG + chr1_4:1172061-1172080 None:intergenic 25.0%
!! AATTTCGATTTTCCTTTGAT+TGG - chr1_4:1172089-1172108 Msa0142270:CDS 25.0%
!! ATTTCGATTTTCCTTTGATT+GGG - chr1_4:1172090-1172109 Msa0142270:CDS 25.0%
! TTATGATACGTTTGATATGA+GGG - chr1_4:1172342-1172361 Msa0142270:CDS 25.0%
!! GTTAAATTTGCTCAGTATAT+GGG - chr1_4:1172769-1172788 Msa0142270:CDS 25.0%
!! TTAAATTTGCTCAGTATATG+GGG - chr1_4:1172770-1172789 Msa0142270:CDS 25.0%
!! ATTAAAGTTGTTTCCATTGT+TGG - chr1_4:1172793-1172812 Msa0142270:CDS 25.0%
! TAATTATGTTGTTCTTGATG+AGG - chr1_4:1172933-1172952 Msa0142270:CDS 25.0%
!! TGATTTTCTTGCTAAGAATT+TGG - chr1_4:1173308-1173327 Msa0142270:CDS 25.0%
!!! TTTTAGGTTTTTTTGAACCT+AGG + chr1_4:1172045-1172064 None:intergenic 25.0%
!!! GGTTTAATAACCCTTTTTTT+AGG + chr1_4:1172061-1172080 None:intergenic 25.0%
!! AATTTCGATTTTCCTTTGAT+TGG - chr1_4:1172089-1172108 Msa0142270:CDS 25.0%
!! ATTTCGATTTTCCTTTGATT+GGG - chr1_4:1172090-1172109 Msa0142270:CDS 25.0%
! TTATGATACGTTTGATATGA+GGG - chr1_4:1172342-1172361 Msa0142270:CDS 25.0%
!! GTTAAATTTGCTCAGTATAT+GGG - chr1_4:1172769-1172788 Msa0142270:CDS 25.0%
!! TTAAATTTGCTCAGTATATG+GGG - chr1_4:1172770-1172789 Msa0142270:CDS 25.0%
!! ATTAAAGTTGTTTCCATTGT+TGG - chr1_4:1172793-1172812 Msa0142270:CDS 25.0%
! TAATTATGTTGTTCTTGATG+AGG - chr1_4:1172933-1172952 Msa0142270:CDS 25.0%
!! TGATTTTCTTGCTAAGAATT+TGG - chr1_4:1173308-1173327 Msa0142270:CDS 25.0%
GAAAATCGAAATTTCTCACT+AGG + chr1_4:1172082-1172101 None:intergenic 30.0%
! TTCAGTATTTTCCCAATCAA+AGG + chr1_4:1172104-1172123 None:intergenic 30.0%
CTTATGATACGTTTGATATG+AGG - chr1_4:1172341-1172360 Msa0142270:CDS 30.0%
CTAGTGATATAACTCAACAT+AGG + chr1_4:1172652-1172671 None:intergenic 30.0%
CTATGTTGAGTTATATCACT+AGG - chr1_4:1172650-1172669 Msa0142270:CDS 30.0%
! GGTTAAATTTGCTCAGTATA+TGG - chr1_4:1172768-1172787 Msa0142270:CDS 30.0%
TTGATGAGAAGAGGATTTAT+AGG - chr1_4:1173055-1173074 Msa0142270:CDS 30.0%
TTATAAGCTTCAGAGATTGT+TGG - chr1_4:1173233-1173252 Msa0142270:CDS 30.0%
!! AGATTAGTCTTGAAGGATTT+AGG - chr1_4:1173388-1173407 Msa0142270:CDS 30.0%
AACAAGCACATTATATCTCT+TGG + chr1_4:1173415-1173434 None:intergenic 30.0%
TTATCAACTATGATATGCCT+GGG - chr1_4:1173484-1173503 Msa0142270:CDS 30.0%
GAAAATCGAAATTTCTCACT+AGG + chr1_4:1172082-1172101 None:intergenic 30.0%
! TTCAGTATTTTCCCAATCAA+AGG + chr1_4:1172104-1172123 None:intergenic 30.0%
CTTATGATACGTTTGATATG+AGG - chr1_4:1172341-1172360 Msa0142270:CDS 30.0%
CTAGTGATATAACTCAACAT+AGG + chr1_4:1172652-1172671 None:intergenic 30.0%
CTATGTTGAGTTATATCACT+AGG - chr1_4:1172650-1172669 Msa0142270:CDS 30.0%
! GGTTAAATTTGCTCAGTATA+TGG - chr1_4:1172768-1172787 Msa0142270:CDS 30.0%
TTGATGAGAAGAGGATTTAT+AGG - chr1_4:1173055-1173074 Msa0142270:CDS 30.0%
TTATAAGCTTCAGAGATTGT+TGG - chr1_4:1173233-1173252 Msa0142270:CDS 30.0%
!! AGATTAGTCTTGAAGGATTT+AGG - chr1_4:1173388-1173407 Msa0142270:CDS 30.0%
AACAAGCACATTATATCTCT+TGG + chr1_4:1173415-1173434 None:intergenic 30.0%
TTATCAACTATGATATGCCT+GGG - chr1_4:1173484-1173503 Msa0142270:CDS 30.0%
AAAGGAGCTTGAATCGATTA+AGG - chr1_4:1172012-1172031 Msa0142270:CDS 35.0%
TCGATTAAGGAACAATACCT+AGG - chr1_4:1172025-1172044 Msa0142270:CDS 35.0%
! AAAGTTGTTTCCATTGTTGG+TGG - chr1_4:1172796-1172815 Msa0142270:CDS 35.0%
! CAAGGGTTTAAGATAAGACA+GGG - chr1_4:1172835-1172854 Msa0142270:CDS 35.0%
GCTGATCGTATGATTGATAT+GGG - chr1_4:1172955-1172974 Msa0142270:CDS 35.0%
CTGATCGTATGATTGATATG+GGG - chr1_4:1172956-1172975 Msa0142270:CDS 35.0%
! TCTGGTTTGAGATTACTAGA+AGG + chr1_4:1173018-1173037 None:intergenic 35.0%
TCTTGCTAAGAATTTGGACA+AGG - chr1_4:1173314-1173333 Msa0142270:CDS 35.0%
GTTATCAACTATGATATGCC+TGG - chr1_4:1173483-1173502 Msa0142270:CDS 35.0%
GTGTACATTTCAATATTCCC+AGG + chr1_4:1173504-1173523 None:intergenic 35.0%
AAATGTACACCCATCGTATT+GGG - chr1_4:1173514-1173533 Msa0142270:CDS 35.0%
! AATAGATCCTGGCTTGAATT+TGG + chr1_4:1173679-1173698 None:intergenic 35.0%
AAAGGAGCTTGAATCGATTA+AGG - chr1_4:1172012-1172031 Msa0142270:CDS 35.0%
TCGATTAAGGAACAATACCT+AGG - chr1_4:1172025-1172044 Msa0142270:CDS 35.0%
! AAAGTTGTTTCCATTGTTGG+TGG - chr1_4:1172796-1172815 Msa0142270:CDS 35.0%
! CAAGGGTTTAAGATAAGACA+GGG - chr1_4:1172835-1172854 Msa0142270:CDS 35.0%
GCTGATCGTATGATTGATAT+GGG - chr1_4:1172955-1172974 Msa0142270:CDS 35.0%
CTGATCGTATGATTGATATG+GGG - chr1_4:1172956-1172975 Msa0142270:CDS 35.0%
! TCTGGTTTGAGATTACTAGA+AGG + chr1_4:1173018-1173037 None:intergenic 35.0%
TCTTGCTAAGAATTTGGACA+AGG - chr1_4:1173314-1173333 Msa0142270:CDS 35.0%
GTTATCAACTATGATATGCC+TGG - chr1_4:1173483-1173502 Msa0142270:CDS 35.0%
GTGTACATTTCAATATTCCC+AGG + chr1_4:1173504-1173523 None:intergenic 35.0%
AAATGTACACCCATCGTATT+GGG - chr1_4:1173514-1173533 Msa0142270:CDS 35.0%
! AATAGATCCTGGCTTGAATT+TGG + chr1_4:1173679-1173698 None:intergenic 35.0%
!! TTGGTGAGGAATACTGGTTT+GGG + chr1_4:1171668-1171687 None:intergenic 40.0%
! TTTGGTGAGGAATACTGGTT+TGG + chr1_4:1171669-1171688 None:intergenic 40.0%
TGGAAAGGAGAAGTTCTTCT+TGG + chr1_4:1171754-1171773 None:intergenic 40.0%
ACAGAGAACGAGAAAGAGAT+AGG - chr1_4:1171867-1171886 Msa0142270:CDS 40.0%
CAGAGAACGAGAAAGAGATA+GGG - chr1_4:1171868-1171887 Msa0142270:CDS 40.0%
AACGAGAAAGAGATAGGGAA+AGG - chr1_4:1171873-1171892 Msa0142270:CDS 40.0%
ACGAGAAAGAGATAGGGAAA+GGG - chr1_4:1171874-1171893 Msa0142270:CDS 40.0%
CTTCTTCACGTTCTTTATCG+CGG + chr1_4:1171937-1171956 None:intergenic 40.0%
AAAGAAGCTGAGCTTCATGA+GGG + chr1_4:1172162-1172181 None:intergenic 40.0%
AAAAGAAGCTGAGCTTCATG+AGG + chr1_4:1172163-1172182 None:intergenic 40.0%
! CATGAAGCTCAGCTTCTTTT+TGG - chr1_4:1172163-1172182 Msa0142270:CDS 40.0%
AAGAGATGAGGGATCAGATT+AGG - chr1_4:1172248-1172267 Msa0142270:CDS 40.0%
GATCAGATTAGGAAGAAGGA+TGG - chr1_4:1172259-1172278 Msa0142270:CDS 40.0%
! ATATGAGGGTTGATCGTCAT+TGG - chr1_4:1172356-1172375 Msa0142270:CDS 40.0%
AAATATACGCCAATCCCTCT+CGG + chr1_4:1172407-1172426 None:intergenic 40.0%
! AGAGGGATTGGCGTATATTT+AGG - chr1_4:1172407-1172426 Msa0142270:CDS 40.0%
! GAGGGATTGGCGTATATTTA+GGG - chr1_4:1172408-1172427 Msa0142270:CDS 40.0%
ATAAGGGTTCCAAGATTCCA+AGG - chr1_4:1172449-1172468 Msa0142270:CDS 40.0%
! GTTGAGTCAAGAGCTTTTGA+AGG - chr1_4:1172498-1172517 Msa0142270:CDS 40.0%
TCATTCTCCTCACTAATAGG+AGG + chr1_4:1172679-1172698 None:intergenic 40.0%
GCTTCATTCTCCTCACTAAT+AGG + chr1_4:1172682-1172701 None:intergenic 40.0%
! GCAAGGGTTTAAGATAAGAC+AGG - chr1_4:1172834-1172853 Msa0142270:CDS 40.0%
AAGCAATCAATCAAACGACC+AGG + chr1_4:1172883-1172902 None:intergenic 40.0%
TGGTCGTTTGATTGATTGCT+TGG - chr1_4:1172882-1172901 Msa0142270:CDS 40.0%
GGCTGATCGTATGATTGATA+TGG - chr1_4:1172954-1172973 Msa0142270:CDS 40.0%
CAAACCAGAGAATGAAGATG+AGG - chr1_4:1173029-1173048 Msa0142270:CDS 40.0%
AGTTCCTCATCTTCATTCTC+TGG + chr1_4:1173036-1173055 None:intergenic 40.0%
ATGAGGAACTTGATGAGAAG+AGG - chr1_4:1173046-1173065 Msa0142270:CDS 40.0%
!! GGCTTGCTAGAAAGTATTTG+AGG - chr1_4:1173121-1173140 Msa0142270:CDS 40.0%
TACCTATAGTCACGACAACA+GGG + chr1_4:1173149-1173168 None:intergenic 40.0%
CTTTCATCATGATCACATGC+TGG + chr1_4:1173200-1173219 None:intergenic 40.0%
AAGAAAATCAGCGCTCTTCT+TGG + chr1_4:1173298-1173317 None:intergenic 40.0%
GCTAAGAATTTGGACAAGGA+AGG - chr1_4:1173318-1173337 Msa0142270:CDS 40.0%
!! TGGTATTGACATTCCTGATG+TGG - chr1_4:1173455-1173474 Msa0142270:CDS 40.0%
! TTGATAACATGAGCCACATC+AGG + chr1_4:1173471-1173490 None:intergenic 40.0%
GAAATGTACACCCATCGTAT+TGG - chr1_4:1173513-1173532 Msa0142270:CDS 40.0%
TACAACATTCCTGACTCTTC+AGG - chr1_4:1173569-1173588 Msa0142270:CDS 40.0%
!! AAAACAGTGTCATTTCGCCT+AGG + chr1_4:1173714-1173733 None:intergenic 40.0%
!! TTGGTGAGGAATACTGGTTT+GGG + chr1_4:1171668-1171687 None:intergenic 40.0%
! TTTGGTGAGGAATACTGGTT+TGG + chr1_4:1171669-1171688 None:intergenic 40.0%
TGGAAAGGAGAAGTTCTTCT+TGG + chr1_4:1171754-1171773 None:intergenic 40.0%
ACAGAGAACGAGAAAGAGAT+AGG - chr1_4:1171867-1171886 Msa0142270:CDS 40.0%
CAGAGAACGAGAAAGAGATA+GGG - chr1_4:1171868-1171887 Msa0142270:CDS 40.0%
AACGAGAAAGAGATAGGGAA+AGG - chr1_4:1171873-1171892 Msa0142270:CDS 40.0%
ACGAGAAAGAGATAGGGAAA+GGG - chr1_4:1171874-1171893 Msa0142270:CDS 40.0%
CTTCTTCACGTTCTTTATCG+CGG + chr1_4:1171937-1171956 None:intergenic 40.0%
AAAGAAGCTGAGCTTCATGA+GGG + chr1_4:1172162-1172181 None:intergenic 40.0%
AAAAGAAGCTGAGCTTCATG+AGG + chr1_4:1172163-1172182 None:intergenic 40.0%
! CATGAAGCTCAGCTTCTTTT+TGG - chr1_4:1172163-1172182 Msa0142270:CDS 40.0%
AAGAGATGAGGGATCAGATT+AGG - chr1_4:1172248-1172267 Msa0142270:CDS 40.0%
GATCAGATTAGGAAGAAGGA+TGG - chr1_4:1172259-1172278 Msa0142270:CDS 40.0%
! ATATGAGGGTTGATCGTCAT+TGG - chr1_4:1172356-1172375 Msa0142270:CDS 40.0%
AAATATACGCCAATCCCTCT+CGG + chr1_4:1172407-1172426 None:intergenic 40.0%
! AGAGGGATTGGCGTATATTT+AGG - chr1_4:1172407-1172426 Msa0142270:CDS 40.0%
! GAGGGATTGGCGTATATTTA+GGG - chr1_4:1172408-1172427 Msa0142270:CDS 40.0%
ATAAGGGTTCCAAGATTCCA+AGG - chr1_4:1172449-1172468 Msa0142270:CDS 40.0%
! GTTGAGTCAAGAGCTTTTGA+AGG - chr1_4:1172498-1172517 Msa0142270:CDS 40.0%
TCATTCTCCTCACTAATAGG+AGG + chr1_4:1172679-1172698 None:intergenic 40.0%
GCTTCATTCTCCTCACTAAT+AGG + chr1_4:1172682-1172701 None:intergenic 40.0%
! GCAAGGGTTTAAGATAAGAC+AGG - chr1_4:1172834-1172853 Msa0142270:CDS 40.0%
AAGCAATCAATCAAACGACC+AGG + chr1_4:1172883-1172902 None:intergenic 40.0%
TGGTCGTTTGATTGATTGCT+TGG - chr1_4:1172882-1172901 Msa0142270:CDS 40.0%
GGCTGATCGTATGATTGATA+TGG - chr1_4:1172954-1172973 Msa0142270:CDS 40.0%
CAAACCAGAGAATGAAGATG+AGG - chr1_4:1173029-1173048 Msa0142270:CDS 40.0%
AGTTCCTCATCTTCATTCTC+TGG + chr1_4:1173036-1173055 None:intergenic 40.0%
ATGAGGAACTTGATGAGAAG+AGG - chr1_4:1173046-1173065 Msa0142270:CDS 40.0%
!! GGCTTGCTAGAAAGTATTTG+AGG - chr1_4:1173121-1173140 Msa0142270:CDS 40.0%
TACCTATAGTCACGACAACA+GGG + chr1_4:1173149-1173168 None:intergenic 40.0%
CTTTCATCATGATCACATGC+TGG + chr1_4:1173200-1173219 None:intergenic 40.0%
AAGAAAATCAGCGCTCTTCT+TGG + chr1_4:1173298-1173317 None:intergenic 40.0%
GCTAAGAATTTGGACAAGGA+AGG - chr1_4:1173318-1173337 Msa0142270:CDS 40.0%
!! TGGTATTGACATTCCTGATG+TGG - chr1_4:1173455-1173474 Msa0142270:CDS 40.0%
! TTGATAACATGAGCCACATC+AGG + chr1_4:1173471-1173490 None:intergenic 40.0%
GAAATGTACACCCATCGTAT+TGG - chr1_4:1173513-1173532 Msa0142270:CDS 40.0%
TACAACATTCCTGACTCTTC+AGG - chr1_4:1173569-1173588 Msa0142270:CDS 40.0%
!! AAAACAGTGTCATTTCGCCT+AGG + chr1_4:1173714-1173733 None:intergenic 40.0%
GAAACGACCCACTGATGAAT+TGG - chr1_4:1171619-1171638 Msa0142270:CDS 45.0%
!! GAATACTGGTTTGGGGATAG+CGG + chr1_4:1171660-1171679 None:intergenic 45.0%
!! TGGTGAGGAATACTGGTTTG+GGG + chr1_4:1171667-1171686 None:intergenic 45.0%
! TTGTTGTTCACGTTGGGCTT+TGG + chr1_4:1171687-1171706 None:intergenic 45.0%
!! GAGTGCTTGTTGTTCACGTT+GGG + chr1_4:1171693-1171712 None:intergenic 45.0%
! AGCGGTTGTTGTTGTTGGAA+AGG + chr1_4:1171769-1171788 None:intergenic 45.0%
CAAGCACGAGAAAGAGATGA+GGG - chr1_4:1172237-1172256 Msa0142270:CDS 45.0%
GAGGGATCAGATTAGGAAGA+AGG - chr1_4:1172255-1172274 Msa0142270:CDS 45.0%
GATTAGGAAGAAGGATGGTG+TGG - chr1_4:1172264-1172283 Msa0142270:CDS 45.0%
TTGGAGTGAGAAGAAGCTTG+AGG - chr1_4:1172375-1172394 Msa0142270:CDS 45.0%
!! TCAAGAGCTTTTGAAGGCTG+TGG - chr1_4:1172504-1172523 Msa0142270:CDS 45.0%
GGAATAGCAGCCATCTGAAT+GGG + chr1_4:1172556-1172575 None:intergenic 45.0%
TAGGCTTCCTCCTATTAGTG+AGG - chr1_4:1172669-1172688 Msa0142270:CDS 45.0%
TAGTGAGGAGAATGAAGCTG+AGG - chr1_4:1172684-1172703 Msa0142270:CDS 45.0%
AGTGAGGAGAATGAAGCTGA+GGG - chr1_4:1172685-1172704 Msa0142270:CDS 45.0%
GGGTCCTTATGCTGTTGTTA+TGG - chr1_4:1172705-1172724 Msa0142270:CDS 45.0%
! GGTGCCATAACAACAGCATA+AGG + chr1_4:1172712-1172731 None:intergenic 45.0%
TCAGCAGATTGAGGATGAGA+CGG - chr1_4:1172747-1172766 Msa0142270:CDS 45.0%
!! AATGGACTGACCACCAACAA+TGG + chr1_4:1172809-1172828 None:intergenic 45.0%
CTTAAACCCTTGCTCCTCAA+TGG + chr1_4:1172827-1172846 None:intergenic 45.0%
GAAATTGTGATTGCGACTCC+TGG - chr1_4:1172862-1172881 Msa0142270:CDS 45.0%
AACCCTGTTGTCGTGACTAT+AGG - chr1_4:1173144-1173163 Msa0142270:CDS 45.0%
GTACCTATAGTCACGACAAC+AGG + chr1_4:1173150-1173169 None:intergenic 45.0%
TATCGCGTGACTACTTTGCA+TGG - chr1_4:1173342-1173361 Msa0142270:CDS 45.0%
TTTGCATGGAGGGAAATCAC+AGG - chr1_4:1173356-1173375 Msa0142270:CDS 45.0%
AGGGAAATCACAGGATCAGA+GGG - chr1_4:1173365-1173384 Msa0142270:CDS 45.0%
!! CAGAGGGAGATTAGTCTTGA+AGG - chr1_4:1173381-1173400 Msa0142270:CDS 45.0%
CTTGTTGCAACTGATGTTGC+TGG - chr1_4:1173429-1173448 Msa0142270:CDS 45.0%
GAAGCTTCCAAATTCAAGCC+AGG - chr1_4:1173669-1173688 Msa0142270:CDS 45.0%
GAAACGACCCACTGATGAAT+TGG - chr1_4:1171619-1171638 Msa0142270:CDS 45.0%
!! GAATACTGGTTTGGGGATAG+CGG + chr1_4:1171660-1171679 None:intergenic 45.0%
!! TGGTGAGGAATACTGGTTTG+GGG + chr1_4:1171667-1171686 None:intergenic 45.0%
! TTGTTGTTCACGTTGGGCTT+TGG + chr1_4:1171687-1171706 None:intergenic 45.0%
!! GAGTGCTTGTTGTTCACGTT+GGG + chr1_4:1171693-1171712 None:intergenic 45.0%
! AGCGGTTGTTGTTGTTGGAA+AGG + chr1_4:1171769-1171788 None:intergenic 45.0%
CAAGCACGAGAAAGAGATGA+GGG - chr1_4:1172237-1172256 Msa0142270:CDS 45.0%
GAGGGATCAGATTAGGAAGA+AGG - chr1_4:1172255-1172274 Msa0142270:CDS 45.0%
GATTAGGAAGAAGGATGGTG+TGG - chr1_4:1172264-1172283 Msa0142270:CDS 45.0%
TTGGAGTGAGAAGAAGCTTG+AGG - chr1_4:1172375-1172394 Msa0142270:CDS 45.0%
!! TCAAGAGCTTTTGAAGGCTG+TGG - chr1_4:1172504-1172523 Msa0142270:CDS 45.0%
GGAATAGCAGCCATCTGAAT+GGG + chr1_4:1172556-1172575 None:intergenic 45.0%
TAGGCTTCCTCCTATTAGTG+AGG - chr1_4:1172669-1172688 Msa0142270:CDS 45.0%
TAGTGAGGAGAATGAAGCTG+AGG - chr1_4:1172684-1172703 Msa0142270:CDS 45.0%
AGTGAGGAGAATGAAGCTGA+GGG - chr1_4:1172685-1172704 Msa0142270:CDS 45.0%
GGGTCCTTATGCTGTTGTTA+TGG - chr1_4:1172705-1172724 Msa0142270:CDS 45.0%
! GGTGCCATAACAACAGCATA+AGG + chr1_4:1172712-1172731 None:intergenic 45.0%
TCAGCAGATTGAGGATGAGA+CGG - chr1_4:1172747-1172766 Msa0142270:CDS 45.0%
!! AATGGACTGACCACCAACAA+TGG + chr1_4:1172809-1172828 None:intergenic 45.0%
CTTAAACCCTTGCTCCTCAA+TGG + chr1_4:1172827-1172846 None:intergenic 45.0%
GAAATTGTGATTGCGACTCC+TGG - chr1_4:1172862-1172881 Msa0142270:CDS 45.0%
AACCCTGTTGTCGTGACTAT+AGG - chr1_4:1173144-1173163 Msa0142270:CDS 45.0%
GTACCTATAGTCACGACAAC+AGG + chr1_4:1173150-1173169 None:intergenic 45.0%
TATCGCGTGACTACTTTGCA+TGG - chr1_4:1173342-1173361 Msa0142270:CDS 45.0%
TTTGCATGGAGGGAAATCAC+AGG - chr1_4:1173356-1173375 Msa0142270:CDS 45.0%
AGGGAAATCACAGGATCAGA+GGG - chr1_4:1173365-1173384 Msa0142270:CDS 45.0%
!! CAGAGGGAGATTAGTCTTGA+AGG - chr1_4:1173381-1173400 Msa0142270:CDS 45.0%
CTTGTTGCAACTGATGTTGC+TGG - chr1_4:1173429-1173448 Msa0142270:CDS 45.0%
GAAGCTTCCAAATTCAAGCC+AGG - chr1_4:1173669-1173688 Msa0142270:CDS 45.0%
! TGGGCTTTGGTGAGGAATAC+TGG + chr1_4:1171674-1171693 None:intergenic 50.0%
!! CGAGTGCTTGTTGTTCACGT+TGG + chr1_4:1171694-1171713 None:intergenic 50.0%
TTCTTGGTCGCGTTTGTGAC+CGG + chr1_4:1171738-1171757 None:intergenic 50.0%
! GGAATCGGAAGGTTTGGGAT+CGG + chr1_4:1171795-1171814 None:intergenic 50.0%
AACTGTCTCGATCGTGACCA+CGG + chr1_4:1171841-1171860 None:intergenic 50.0%
TGCTCGATTGGAGAAGCTTG+CGG - chr1_4:1171976-1171995 Msa0142270:CDS 50.0%
TGCGGAACGAGAACGTGAAA+AGG - chr1_4:1171994-1172013 Msa0142270:CDS 50.0%
!! CTCAGCTTCTTTTTGGCCGA+GGG - chr1_4:1172170-1172189 Msa0142270:CDS 50.0%
!! CCATTCCAGCTCTAAACCCT+CGG + chr1_4:1172189-1172208 None:intergenic 50.0%
CATCTCTTTCTCGTGCTTGG+CGG + chr1_4:1172236-1172255 None:intergenic 50.0%
CCTCATCTCTTTCTCGTGCT+TGG + chr1_4:1172239-1172258 None:intergenic 50.0%
CCAAGCACGAGAAAGAGATG+AGG - chr1_4:1172236-1172255 Msa0142270:CDS 50.0%
TAGGAAGAAGGATGGTGTGG+AGG - chr1_4:1172267-1172286 Msa0142270:CDS 50.0%
AGCTTGAGGAAATGACCGAG+AGG - chr1_4:1172389-1172408 Msa0142270:CDS 50.0%
GCTTGAGGAAATGACCGAGA+GGG - chr1_4:1172390-1172409 Msa0142270:CDS 50.0%
AGGAAATGACCGAGAGGGAT+TGG - chr1_4:1172395-1172414 Msa0142270:CDS 50.0%
CCTCATAGGCCTTGGAATCT+TGG + chr1_4:1172461-1172480 None:intergenic 50.0%
CCAAGATTCCAAGGCCTATG+AGG - chr1_4:1172458-1172477 Msa0142270:CDS 50.0%
TTCCAAGGCCTATGAGGAGT+TGG - chr1_4:1172464-1172483 Msa0142270:CDS 50.0%
TCCAAGGCCTATGAGGAGTT+GGG - chr1_4:1172465-1172484 Msa0142270:CDS 50.0%
CTCTCAACCCAACTCCTCAT+AGG + chr1_4:1172475-1172494 None:intergenic 50.0%
!! GCTTTTGAAGGCTGTGGAGA+AGG - chr1_4:1172510-1172529 Msa0142270:CDS 50.0%
AACCCCTTCTCCCATTCAGA+TGG - chr1_4:1172543-1172562 Msa0142270:CDS 50.0%
AGCCATCTGAATGGGAGAAG+GGG + chr1_4:1172548-1172567 None:intergenic 50.0%
CAGCCATCTGAATGGGAGAA+GGG + chr1_4:1172549-1172568 None:intergenic 50.0%
CGGAATAGCAGCCATCTGAA+TGG + chr1_4:1172557-1172576 None:intergenic 50.0%
CTTCAGCAGCGCGATGTTAT+CGG - chr1_4:1172583-1172602 Msa0142270:CDS 50.0%
!! TGTTGGTGGTCAGTCCATTG+AGG - chr1_4:1172810-1172829 Msa0142270:CDS 50.0%
GTCAGTCCATTGAGGAGCAA+GGG - chr1_4:1172818-1172837 Msa0142270:CDS 50.0%
! GTCGTGACTATAGGTACTGC+TGG - chr1_4:1173153-1173172 Msa0142270:CDS 50.0%
GCGTGACTACTTTGCATGGA+GGG - chr1_4:1173346-1173365 Msa0142270:CDS 50.0%
GAGGGAAATCACAGGATCAG+AGG - chr1_4:1173364-1173383 Msa0142270:CDS 50.0%
ACCAGTACGCCCAATACGAT+GGG + chr1_4:1173526-1173545 None:intergenic 50.0%
TACTGGTCGTGCAGGAAAGA+CGG - chr1_4:1173539-1173558 Msa0142270:CDS 50.0%
CATCAGTGTCCTGAAGAGTC+AGG + chr1_4:1173581-1173600 None:intergenic 50.0%
CAGTCCTGTTCCACCTGAAT+TGG - chr1_4:1173638-1173657 Msa0142270:CDS 50.0%
CTTGCCAATTCAGGTGGAAC+AGG + chr1_4:1173645-1173664 None:intergenic 50.0%
CTGTTCCACCTGAATTGGCA+AGG - chr1_4:1173643-1173662 Msa0142270:CDS 50.0%
TCATGCCTTGCCAATTCAGG+TGG + chr1_4:1173651-1173670 None:intergenic 50.0%
GCTTCATGCCTTGCCAATTC+AGG + chr1_4:1173654-1173673 None:intergenic 50.0%
ATTTCGCCTAGGTGGTCTGT+CGG + chr1_4:1173703-1173722 None:intergenic 50.0%
!! ACAGTGTCATTTCGCCTAGG+TGG + chr1_4:1173711-1173730 None:intergenic 50.0%
! TGGGCTTTGGTGAGGAATAC+TGG + chr1_4:1171674-1171693 None:intergenic 50.0%
!! CGAGTGCTTGTTGTTCACGT+TGG + chr1_4:1171694-1171713 None:intergenic 50.0%
TTCTTGGTCGCGTTTGTGAC+CGG + chr1_4:1171738-1171757 None:intergenic 50.0%
! GGAATCGGAAGGTTTGGGAT+CGG + chr1_4:1171795-1171814 None:intergenic 50.0%
AACTGTCTCGATCGTGACCA+CGG + chr1_4:1171841-1171860 None:intergenic 50.0%
TGCTCGATTGGAGAAGCTTG+CGG - chr1_4:1171976-1171995 Msa0142270:CDS 50.0%
TGCGGAACGAGAACGTGAAA+AGG - chr1_4:1171994-1172013 Msa0142270:CDS 50.0%
!! CTCAGCTTCTTTTTGGCCGA+GGG - chr1_4:1172170-1172189 Msa0142270:CDS 50.0%
!! CCATTCCAGCTCTAAACCCT+CGG + chr1_4:1172189-1172208 None:intergenic 50.0%
CATCTCTTTCTCGTGCTTGG+CGG + chr1_4:1172236-1172255 None:intergenic 50.0%
CCTCATCTCTTTCTCGTGCT+TGG + chr1_4:1172239-1172258 None:intergenic 50.0%
CCAAGCACGAGAAAGAGATG+AGG - chr1_4:1172236-1172255 Msa0142270:CDS 50.0%
TAGGAAGAAGGATGGTGTGG+AGG - chr1_4:1172267-1172286 Msa0142270:CDS 50.0%
AGCTTGAGGAAATGACCGAG+AGG - chr1_4:1172389-1172408 Msa0142270:CDS 50.0%
GCTTGAGGAAATGACCGAGA+GGG - chr1_4:1172390-1172409 Msa0142270:CDS 50.0%
AGGAAATGACCGAGAGGGAT+TGG - chr1_4:1172395-1172414 Msa0142270:CDS 50.0%
CCTCATAGGCCTTGGAATCT+TGG + chr1_4:1172461-1172480 None:intergenic 50.0%
CCAAGATTCCAAGGCCTATG+AGG - chr1_4:1172458-1172477 Msa0142270:CDS 50.0%
TTCCAAGGCCTATGAGGAGT+TGG - chr1_4:1172464-1172483 Msa0142270:CDS 50.0%
TCCAAGGCCTATGAGGAGTT+GGG - chr1_4:1172465-1172484 Msa0142270:CDS 50.0%
CTCTCAACCCAACTCCTCAT+AGG + chr1_4:1172475-1172494 None:intergenic 50.0%
!! GCTTTTGAAGGCTGTGGAGA+AGG - chr1_4:1172510-1172529 Msa0142270:CDS 50.0%
AACCCCTTCTCCCATTCAGA+TGG - chr1_4:1172543-1172562 Msa0142270:CDS 50.0%
AGCCATCTGAATGGGAGAAG+GGG + chr1_4:1172548-1172567 None:intergenic 50.0%
CAGCCATCTGAATGGGAGAA+GGG + chr1_4:1172549-1172568 None:intergenic 50.0%
CGGAATAGCAGCCATCTGAA+TGG + chr1_4:1172557-1172576 None:intergenic 50.0%
CTTCAGCAGCGCGATGTTAT+CGG - chr1_4:1172583-1172602 Msa0142270:CDS 50.0%
!! TGTTGGTGGTCAGTCCATTG+AGG - chr1_4:1172810-1172829 Msa0142270:CDS 50.0%
GTCAGTCCATTGAGGAGCAA+GGG - chr1_4:1172818-1172837 Msa0142270:CDS 50.0%
! GTCGTGACTATAGGTACTGC+TGG - chr1_4:1173153-1173172 Msa0142270:CDS 50.0%
GCGTGACTACTTTGCATGGA+GGG - chr1_4:1173346-1173365 Msa0142270:CDS 50.0%
GAGGGAAATCACAGGATCAG+AGG - chr1_4:1173364-1173383 Msa0142270:CDS 50.0%
ACCAGTACGCCCAATACGAT+GGG + chr1_4:1173526-1173545 None:intergenic 50.0%
TACTGGTCGTGCAGGAAAGA+CGG - chr1_4:1173539-1173558 Msa0142270:CDS 50.0%
CATCAGTGTCCTGAAGAGTC+AGG + chr1_4:1173581-1173600 None:intergenic 50.0%
CAGTCCTGTTCCACCTGAAT+TGG - chr1_4:1173638-1173657 Msa0142270:CDS 50.0%
CTTGCCAATTCAGGTGGAAC+AGG + chr1_4:1173645-1173664 None:intergenic 50.0%
CTGTTCCACCTGAATTGGCA+AGG - chr1_4:1173643-1173662 Msa0142270:CDS 50.0%
TCATGCCTTGCCAATTCAGG+TGG + chr1_4:1173651-1173670 None:intergenic 50.0%
GCTTCATGCCTTGCCAATTC+AGG + chr1_4:1173654-1173673 None:intergenic 50.0%
ATTTCGCCTAGGTGGTCTGT+CGG + chr1_4:1173703-1173722 None:intergenic 50.0%
!! ACAGTGTCATTTCGCCTAGG+TGG + chr1_4:1173711-1173730 None:intergenic 50.0%
ACGGGGGCCAATTCATCAGT+GGG + chr1_4:1171629-1171648 None:intergenic 55.0%
!! TACTGGTTTGGGGATAGCGG+TGG + chr1_4:1171657-1171676 None:intergenic 55.0%
! GTTCACGTTGGGCTTTGGTG+AGG + chr1_4:1171682-1171701 None:intergenic 55.0%
TGTGACCGGCGACTTGATTG+TGG + chr1_4:1171724-1171743 None:intergenic 55.0%
! GGAGGAGCGGTTGTTGTTGT+TGG + chr1_4:1171774-1171793 None:intergenic 55.0%
! AAGGTTTGGGATCGGAGGAG+CGG + chr1_4:1171787-1171806 None:intergenic 55.0%
! ATCGGAAGGTTTGGGATCGG+AGG + chr1_4:1171792-1171811 None:intergenic 55.0%
CGGTCGGAATCGGAAGGTTT+GGG + chr1_4:1171800-1171819 None:intergenic 55.0%
AGCTCGTGAACGTGCTCGAT+TGG - chr1_4:1171964-1171983 Msa0142270:CDS 55.0%
!! GCTCAGCTTCTTTTTGGCCG+AGG - chr1_4:1172169-1172188 Msa0142270:CDS 55.0%
! TTTGGCCGAGGGTTTAGAGC+TGG - chr1_4:1172181-1172200 Msa0142270:CDS 55.0%
! CCGAGGGTTTAGAGCTGGAA+TGG - chr1_4:1172186-1172205 Msa0142270:CDS 55.0%
CGGCAAGCTTCTTCTGCTCA+CGG + chr1_4:1172216-1172235 None:intergenic 55.0%
ACCCAACTCCTCATAGGCCT+TGG + chr1_4:1172469-1172488 None:intergenic 55.0%
TTGAAGGCTGTGGAGAAGGC+AGG - chr1_4:1172514-1172533 Msa0142270:CDS 55.0%
GCAGCCATCTGAATGGGAGA+AGG + chr1_4:1172550-1172569 None:intergenic 55.0%
CAGATGGCTGCTATTCCGCT+TGG - chr1_4:1172559-1172578 Msa0142270:CDS 55.0%
GTTATCGGCGTTGCTGAGAC+CGG - chr1_4:1172598-1172617 Msa0142270:CDS 55.0%
! CGAGCTTGCTCAGCAGATTG+AGG - chr1_4:1172738-1172757 Msa0142270:CDS 55.0%
GGTCAGTCCATTGAGGAGCA+AGG - chr1_4:1172817-1172836 Msa0142270:CDS 55.0%
!! TTGCTTGGAGCGTCGCTATG+CGG - chr1_4:1172897-1172916 Msa0142270:CDS 55.0%
TGATATGGGGTTTGAGCCGC+AGG - chr1_4:1172969-1172988 Msa0142270:CDS 55.0%
TCCAACACACCCATGACCTG+CGG + chr1_4:1172988-1173007 None:intergenic 55.0%
CGCGTGACTACTTTGCATGG+AGG - chr1_4:1173345-1173364 Msa0142270:CDS 55.0%
GCAACTGATGTTGCTGGACG+TGG - chr1_4:1173435-1173454 Msa0142270:CDS 55.0%
ACCCATCGTATTGGGCGTAC+TGG - chr1_4:1173522-1173541 Msa0142270:CDS 55.0%
GACCAGTACGCCCAATACGA+TGG + chr1_4:1173527-1173546 None:intergenic 55.0%
ACTGGTCGTGCAGGAAAGAC+GGG - chr1_4:1173540-1173559 Msa0142270:CDS 55.0%
GGTCTGTCGGGAATAGATCC+TGG + chr1_4:1173690-1173709 None:intergenic 55.0%
CTATTCCCGACAGACCACCT+AGG - chr1_4:1173694-1173713 Msa0142270:CDS 55.0%
TTTCGCCTAGGTGGTCTGTC+GGG + chr1_4:1173702-1173721 None:intergenic 55.0%
ACGGGGGCCAATTCATCAGT+GGG + chr1_4:1171629-1171648 None:intergenic 55.0%
!! TACTGGTTTGGGGATAGCGG+TGG + chr1_4:1171657-1171676 None:intergenic 55.0%
! GTTCACGTTGGGCTTTGGTG+AGG + chr1_4:1171682-1171701 None:intergenic 55.0%
TGTGACCGGCGACTTGATTG+TGG + chr1_4:1171724-1171743 None:intergenic 55.0%
! GGAGGAGCGGTTGTTGTTGT+TGG + chr1_4:1171774-1171793 None:intergenic 55.0%
! AAGGTTTGGGATCGGAGGAG+CGG + chr1_4:1171787-1171806 None:intergenic 55.0%
! ATCGGAAGGTTTGGGATCGG+AGG + chr1_4:1171792-1171811 None:intergenic 55.0%
CGGTCGGAATCGGAAGGTTT+GGG + chr1_4:1171800-1171819 None:intergenic 55.0%
AGCTCGTGAACGTGCTCGAT+TGG - chr1_4:1171964-1171983 Msa0142270:CDS 55.0%
!! GCTCAGCTTCTTTTTGGCCG+AGG - chr1_4:1172169-1172188 Msa0142270:CDS 55.0%
! TTTGGCCGAGGGTTTAGAGC+TGG - chr1_4:1172181-1172200 Msa0142270:CDS 55.0%
! CCGAGGGTTTAGAGCTGGAA+TGG - chr1_4:1172186-1172205 Msa0142270:CDS 55.0%
CGGCAAGCTTCTTCTGCTCA+CGG + chr1_4:1172216-1172235 None:intergenic 55.0%
ACCCAACTCCTCATAGGCCT+TGG + chr1_4:1172469-1172488 None:intergenic 55.0%
TTGAAGGCTGTGGAGAAGGC+AGG - chr1_4:1172514-1172533 Msa0142270:CDS 55.0%
GCAGCCATCTGAATGGGAGA+AGG + chr1_4:1172550-1172569 None:intergenic 55.0%
CAGATGGCTGCTATTCCGCT+TGG - chr1_4:1172559-1172578 Msa0142270:CDS 55.0%
GTTATCGGCGTTGCTGAGAC+CGG - chr1_4:1172598-1172617 Msa0142270:CDS 55.0%
! CGAGCTTGCTCAGCAGATTG+AGG - chr1_4:1172738-1172757 Msa0142270:CDS 55.0%
GGTCAGTCCATTGAGGAGCA+AGG - chr1_4:1172817-1172836 Msa0142270:CDS 55.0%
!! TTGCTTGGAGCGTCGCTATG+CGG - chr1_4:1172897-1172916 Msa0142270:CDS 55.0%
TGATATGGGGTTTGAGCCGC+AGG - chr1_4:1172969-1172988 Msa0142270:CDS 55.0%
TCCAACACACCCATGACCTG+CGG + chr1_4:1172988-1173007 None:intergenic 55.0%
CGCGTGACTACTTTGCATGG+AGG - chr1_4:1173345-1173364 Msa0142270:CDS 55.0%
GCAACTGATGTTGCTGGACG+TGG - chr1_4:1173435-1173454 Msa0142270:CDS 55.0%
ACCCATCGTATTGGGCGTAC+TGG - chr1_4:1173522-1173541 Msa0142270:CDS 55.0%
GACCAGTACGCCCAATACGA+TGG + chr1_4:1173527-1173546 None:intergenic 55.0%
ACTGGTCGTGCAGGAAAGAC+GGG - chr1_4:1173540-1173559 Msa0142270:CDS 55.0%
GGTCTGTCGGGAATAGATCC+TGG + chr1_4:1173690-1173709 None:intergenic 55.0%
CTATTCCCGACAGACCACCT+AGG - chr1_4:1173694-1173713 Msa0142270:CDS 55.0%
TTTCGCCTAGGTGGTCTGTC+GGG + chr1_4:1173702-1173721 None:intergenic 55.0%
GACGGGGGCCAATTCATCAG+TGG + chr1_4:1171630-1171649 None:intergenic 60.0%
! TGGTTTGGGGATAGCGGTGG+CGG + chr1_4:1171654-1171673 None:intergenic 60.0%
GACCGGCGACTTGATTGTGG+CGG + chr1_4:1171721-1171740 None:intergenic 60.0%
GCGGTCGGAATCGGAAGGTT+TGG + chr1_4:1171801-1171820 None:intergenic 60.0%
CTCGATCGTGACCACGGTCA+CGG + chr1_4:1171835-1171854 None:intergenic 60.0%
TGATGCTCAGCGGCGTAAGG+AGG - chr1_4:1172306-1172325 Msa0142270:CDS 60.0%
TCGCGCTGCTGAAGTCCAAG+CGG + chr1_4:1172577-1172596 None:intergenic 60.0%
! GCGTTGCTGAGACCGGTTCT+GGG - chr1_4:1172605-1172624 Msa0142270:CDS 60.0%
CGCAGCAGTCTTCCCAGAAC+CGG + chr1_4:1172620-1172639 None:intergenic 60.0%
TGCTGAGCAAGCTCGCGAGT+CGG + chr1_4:1172733-1172752 None:intergenic 60.0%
GGGTTTGAGCCGCAGGTCAT+GGG - chr1_4:1172976-1172995 Msa0142270:CDS 60.0%
CAGTGCTACCATGCCTCCTG+CGG - chr1_4:1173092-1173111 Msa0142270:CDS 60.0%
! ATTGGGCGTACTGGTCGTGC+AGG - chr1_4:1173531-1173550 Msa0142270:CDS 60.0%
TCGTGCAGGAAAGACGGGTG+TGG - chr1_4:1173545-1173564 Msa0142270:CDS 60.0%
GACGGGGGCCAATTCATCAG+TGG + chr1_4:1171630-1171649 None:intergenic 60.0%
! TGGTTTGGGGATAGCGGTGG+CGG + chr1_4:1171654-1171673 None:intergenic 60.0%
GACCGGCGACTTGATTGTGG+CGG + chr1_4:1171721-1171740 None:intergenic 60.0%
GCGGTCGGAATCGGAAGGTT+TGG + chr1_4:1171801-1171820 None:intergenic 60.0%
CTCGATCGTGACCACGGTCA+CGG + chr1_4:1171835-1171854 None:intergenic 60.0%
TGATGCTCAGCGGCGTAAGG+AGG - chr1_4:1172306-1172325 Msa0142270:CDS 60.0%
TCGCGCTGCTGAAGTCCAAG+CGG + chr1_4:1172577-1172596 None:intergenic 60.0%
! GCGTTGCTGAGACCGGTTCT+GGG - chr1_4:1172605-1172624 Msa0142270:CDS 60.0%
CGCAGCAGTCTTCCCAGAAC+CGG + chr1_4:1172620-1172639 None:intergenic 60.0%
TGCTGAGCAAGCTCGCGAGT+CGG + chr1_4:1172733-1172752 None:intergenic 60.0%
GGGTTTGAGCCGCAGGTCAT+GGG - chr1_4:1172976-1172995 Msa0142270:CDS 60.0%
CAGTGCTACCATGCCTCCTG+CGG - chr1_4:1173092-1173111 Msa0142270:CDS 60.0%
! ATTGGGCGTACTGGTCGTGC+AGG - chr1_4:1173531-1173550 Msa0142270:CDS 60.0%
TCGTGCAGGAAAGACGGGTG+TGG - chr1_4:1173545-1173564 Msa0142270:CDS 60.0%
! GTTTGGGGATAGCGGTGGCG+GGG + chr1_4:1171652-1171671 None:intergenic 65.0%
! GGTTTGGGGATAGCGGTGGC+GGG + chr1_4:1171653-1171672 None:intergenic 65.0%
CGCCGCCACAATCAAGTCGC+CGG - chr1_4:1171716-1171735 Msa0142270:CDS 65.0%
ACGATCGCGGCGGTCGGAAT+CGG + chr1_4:1171810-1171829 None:intergenic 65.0%
CACGGTCACGGTCACGATCG+CGG + chr1_4:1171823-1171842 None:intergenic 65.0%
TGGTGTGGAGGAGAAGCCCG+AGG - chr1_4:1172279-1172298 Msa0142270:CDS 65.0%
TGTGGAGGAGAAGCCCGAGG+AGG - chr1_4:1172282-1172301 Msa0142270:CDS 65.0%
CGCTGAGCATCAGCCTCCTC+GGG + chr1_4:1172298-1172317 None:intergenic 65.0%
CCGCTGAGCATCAGCCTCCT+CGG + chr1_4:1172299-1172318 None:intergenic 65.0%
CCGAGGAGGCTGATGCTCAG+CGG - chr1_4:1172296-1172315 Msa0142270:CDS 65.0%
GGCTGATGCTCAGCGGCGTA+AGG - chr1_4:1172303-1172322 Msa0142270:CDS 65.0%
TGCTCAGCGGCGTAAGGAGG+AGG - chr1_4:1172309-1172328 Msa0142270:CDS 65.0%
! GGCGTTGCTGAGACCGGTTC+TGG - chr1_4:1172604-1172623 Msa0142270:CDS 65.0%
GGGGTTTGAGCCGCAGGTCA+TGG - chr1_4:1172975-1172994 Msa0142270:CDS 65.0%
GCCGCAGGTCATGGGTGTGT+TGG - chr1_4:1172984-1173003 Msa0142270:CDS 65.0%
TGCTACCATGCCTCCTGCGG+TGG - chr1_4:1173095-1173114 Msa0142270:CDS 65.0%
CTAGCAAGCCTCTCCACCGC+AGG + chr1_4:1173111-1173130 None:intergenic 65.0%
! GTTTGGGGATAGCGGTGGCG+GGG + chr1_4:1171652-1171671 None:intergenic 65.0%
! GGTTTGGGGATAGCGGTGGC+GGG + chr1_4:1171653-1171672 None:intergenic 65.0%
CGCCGCCACAATCAAGTCGC+CGG - chr1_4:1171716-1171735 Msa0142270:CDS 65.0%
ACGATCGCGGCGGTCGGAAT+CGG + chr1_4:1171810-1171829 None:intergenic 65.0%
CACGGTCACGGTCACGATCG+CGG + chr1_4:1171823-1171842 None:intergenic 65.0%
TGGTGTGGAGGAGAAGCCCG+AGG - chr1_4:1172279-1172298 Msa0142270:CDS 65.0%
TGTGGAGGAGAAGCCCGAGG+AGG - chr1_4:1172282-1172301 Msa0142270:CDS 65.0%
CGCTGAGCATCAGCCTCCTC+GGG + chr1_4:1172298-1172317 None:intergenic 65.0%
CCGCTGAGCATCAGCCTCCT+CGG + chr1_4:1172299-1172318 None:intergenic 65.0%
CCGAGGAGGCTGATGCTCAG+CGG - chr1_4:1172296-1172315 Msa0142270:CDS 65.0%
GGCTGATGCTCAGCGGCGTA+AGG - chr1_4:1172303-1172322 Msa0142270:CDS 65.0%
TGCTCAGCGGCGTAAGGAGG+AGG - chr1_4:1172309-1172328 Msa0142270:CDS 65.0%
! GGCGTTGCTGAGACCGGTTC+TGG - chr1_4:1172604-1172623 Msa0142270:CDS 65.0%
GGGGTTTGAGCCGCAGGTCA+TGG - chr1_4:1172975-1172994 Msa0142270:CDS 65.0%
GCCGCAGGTCATGGGTGTGT+TGG - chr1_4:1172984-1173003 Msa0142270:CDS 65.0%
TGCTACCATGCCTCCTGCGG+TGG - chr1_4:1173095-1173114 Msa0142270:CDS 65.0%
CTAGCAAGCCTCTCCACCGC+AGG + chr1_4:1173111-1173130 None:intergenic 65.0%
TCGCGGCGGTCGGAATCGGA+AGG + chr1_4:1171806-1171825 None:intergenic 70.0%
ACGGTCACGATCGCGGCGGT+CGG + chr1_4:1171816-1171835 None:intergenic 70.0%
GGTCACGGTCACGATCGCGG+CGG + chr1_4:1171820-1171839 None:intergenic 70.0%
CGCGATCGTGACCGTGACCG+TGG - chr1_4:1171821-1171840 Msa0142270:CDS 70.0%
CCTCTCCACCGCAGGAGGCA+TGG + chr1_4:1173103-1173122 None:intergenic 70.0%
CCATGCCTCCTGCGGTGGAG+AGG - chr1_4:1173100-1173119 Msa0142270:CDS 70.0%
GCAAGCCTCTCCACCGCAGG+AGG + chr1_4:1173108-1173127 None:intergenic 70.0%
TCGCGGCGGTCGGAATCGGA+AGG + chr1_4:1171806-1171825 None:intergenic 70.0%
ACGGTCACGATCGCGGCGGT+CGG + chr1_4:1171816-1171835 None:intergenic 70.0%
GGTCACGGTCACGATCGCGG+CGG + chr1_4:1171820-1171839 None:intergenic 70.0%
CGCGATCGTGACCGTGACCG+TGG - chr1_4:1171821-1171840 Msa0142270:CDS 70.0%
CCTCTCCACCGCAGGAGGCA+TGG + chr1_4:1173103-1173122 None:intergenic 70.0%
CCATGCCTCCTGCGGTGGAG+AGG - chr1_4:1173100-1173119 Msa0142270:CDS 70.0%
GCAAGCCTCTCCACCGCAGG+AGG + chr1_4:1173108-1173127 None:intergenic 70.0%
!! GATAGCGGTGGCGGGGACGG+GGG + chr1_4:1171645-1171664 None:intergenic 75.0%
!! GGATAGCGGTGGCGGGGACG+GGG + chr1_4:1171646-1171665 None:intergenic 75.0%
!! GGGATAGCGGTGGCGGGGAC+GGG + chr1_4:1171647-1171666 None:intergenic 75.0%
!! GGGGATAGCGGTGGCGGGGA+CGG + chr1_4:1171648-1171667 None:intergenic 75.0%
!! GATAGCGGTGGCGGGGACGG+GGG + chr1_4:1171645-1171664 None:intergenic 75.0%
!! GGATAGCGGTGGCGGGGACG+GGG + chr1_4:1171646-1171665 None:intergenic 75.0%
!! GGGATAGCGGTGGCGGGGAC+GGG + chr1_4:1171647-1171666 None:intergenic 75.0%
!! GGGGATAGCGGTGGCGGGGA+CGG + chr1_4:1171648-1171667 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 1171617 1173743 1171617 ID=Msa0142270;Name=Msa0142270
chr1_4 mRNA 1171617 1173743 1171617 ID=Msa0142270-mRNA-1;Parent=Msa0142270;Name=Msa0142270-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|-1|0|1|-1|1|1|0|708
chr1_4 exon 1171617 1173743 1171617 ID=Msa0142270-mRNA-1:exon:353;Parent=Msa0142270-mRNA-1
chr1_4 CDS 1171617 1173743 1171617 ID=Msa0142270-mRNA-1:cds;Parent=Msa0142270-mRNA-1
Gene Sequence

>Msa0142270

ATGAAACGACCCACTGATGAATTGGCCCCCGTCCCCGCCACCGCTATCCCCAAACCAGTATTCCTCACCAAAGCCCAACGTGAACAACAAGCACTCGAACGCCGCCACAATCAAGTCGCCGGTCACAAACGCGACCAAGAAGAACTTCTCCTTTCCAACAACAACAACCGCTCCTCCGATCCCAAACCTTCCGATTCCGACCGCCGCGATCGTGACCGTGACCGTGGTCACGATCGAGACAGTTACAGAGACAGAGAACGAGAAAGAGATAGGGAAAGGGAAAGAGACAGAGATAACAGAGATCGTGAACGAAGAAACCGCGATAAAGAACGTGAAGAAGAGAATAAAGCTCGTGAACGTGCTCGATTGGAGAAGCTTGCGGAACGAGAACGTGAAAAGGAGCTTGAATCGATTAAGGAACAATACCTAGGTTCAAAAAAACCTAAAAAAAGGGTTATTAAACCTAGTGAGAAATTTCGATTTTCCTTTGATTGGGAAAATACTGAAGATACTTCGCGTGATATGAATGTTCTTTATCAAAACCCTCATGAAGCTCAGCTTCTTTTTGGCCGAGGGTTTAGAGCTGGAATGGATCGCCGTGAGCAGAAGAAGCTTGCCGCCAAGCACGAGAAAGAGATGAGGGATCAGATTAGGAAGAAGGATGGTGTGGAGGAGAAGCCCGAGGAGGCTGATGCTCAGCGGCGTAAGGAGGAGGCTGCTGATGCTTATGATACGTTTGATATGAGGGTTGATCGTCATTGGAGTGAGAAGAAGCTTGAGGAAATGACCGAGAGGGATTGGCGTATATTTAGGGAAGATTATAACATTTCTTATAAGGGTTCCAAGATTCCAAGGCCTATGAGGAGTTGGGTTGAGAGTAAGTTGAGTCAAGAGCTTTTGAAGGCTGTGGAGAAGGCAGGTTATAAAACCCCTTCTCCCATTCAGATGGCTGCTATTCCGCTTGGACTTCAGCAGCGCGATGTTATCGGCGTTGCTGAGACCGGTTCTGGGAAGACTGCTGCGTTTGTTTTGCCTATGTTGAGTTATATCACTAGGCTTCCTCCTATTAGTGAGGAGAATGAAGCTGAGGGTCCTTATGCTGTTGTTATGGCACCGACTCGCGAGCTTGCTCAGCAGATTGAGGATGAGACGGTTAAATTTGCTCAGTATATGGGGATTAAAGTTGTTTCCATTGTTGGTGGTCAGTCCATTGAGGAGCAAGGGTTTAAGATAAGACAGGGTTGTGAAATTGTGATTGCGACTCCTGGTCGTTTGATTGATTGCTTGGAGCGTCGCTATGCGGTTCTTAATCAGTGTAATTATGTTGTTCTTGATGAGGCTGATCGTATGATTGATATGGGGTTTGAGCCGCAGGTCATGGGTGTGTTGGATGCTATGCCTTCTAGTAATCTCAAACCAGAGAATGAAGATGAGGAACTTGATGAGAAGAGGATTTATAGGACTACTTATATGTTCAGTGCTACCATGCCTCCTGCGGTGGAGAGGCTTGCTAGAAAGTATTTGAGGAACCCTGTTGTCGTGACTATAGGTACTGCTGGAAAAGCAACTGACTTGATCAGCCAGCATGTGATCATGATGAAAGAATCTGAGAAAAATTATAAGCTTCAGAGATTGTTGGATGAGCTTAATGACAAGACTGCGATTGTGTTTGTCAACACCAAGAAGAGCGCTGATTTTCTTGCTAAGAATTTGGACAAGGAAGGTTATCGCGTGACTACTTTGCATGGAGGGAAATCACAGGATCAGAGGGAGATTAGTCTTGAAGGATTTAGGACCAAGAGATATAATGTGCTTGTTGCAACTGATGTTGCTGGACGTGGTATTGACATTCCTGATGTGGCTCATGTTATCAACTATGATATGCCTGGGAATATTGAAATGTACACCCATCGTATTGGGCGTACTGGTCGTGCAGGAAAGACGGGTGTGGCTACAACATTCCTGACTCTTCAGGACACTGATGTCTTTTATGAACTTAAGCAGATGCTCATTCAAAGTAACAGTCCTGTTCCACCTGAATTGGCAAGGCATGAAGCTTCCAAATTCAAGCCAGGATCTATTCCCGACAGACCACCTAGGCGAAATGACACTGTTTTTGCCCATTAG
Protein sequence

>Msa0142270

MKRPTDELAPVPATAIPKPVFLTKAQREQQALERRHNQVAGHKRDQEELLLSNNNNRSSDPKPSDSDRRDRDRDRGHDRDSYRDRERERDRERERDRDNRDRERRNRDKEREEENKARERARLEKLAEREREKELESIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNVLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKHEKEMRDQIRKKDGVEEKPEEADAQRRKEEAADAYDTFDMRVDRHWSEKKLEEMTERDWRIFREDYNISYKGSKIPRPMRSWVESKLSQELLKAVEKAGYKTPSPIQMAAIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMKESEKNYKLQRLLDELNDKTAIVFVNTKKSADFLAKNLDKEGYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDTDVFYELKQMLIQSNSPVPPELARHEASKFKPGSIPDRPPRRNDTVFAH*