AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0079130


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0079130 MtrunA17_Chr1g0190021 98.555 761 11 0 4 764 2 762 0.0 1545
Msa0079130 MtrunA17_Chr7g0274831 71.660 741 203 6 26 764 30 765 0.0 1090
Msa0079130 MtrunA17_Chr1g0186431 55.817 765 320 8 4 760 3 757 0.0 860
Msa0079130 MtrunA17_Chr1g0168161 51.783 757 348 9 10 757 9 757 0.0 767
Msa0079130 MtrunA17_Chr4g0013831 37.885 747 434 17 28 759 3 734 6.56e-160 481
Msa0079130 MtrunA17_Chr7g0269631 37.402 639 361 15 28 645 3 623 1.05e-110 350
Msa0079130 MtrunA17_Chr4g0077091 56.164 73 31 1 689 760 1 73 1.38e-19 83.6
Msa0079130 MtrunA17_Chr8g0377481 33.083 133 79 3 636 760 840 970 3.63e-15 80.1
Msa0079130 MtrunA17_Chr8g0377481 25.595 168 125 0 352 519 371 538 1.20e-12 71.6
Msa0079130 MtrunA17_Chr3g0122391 34.921 126 71 3 636 753 898 1020 1.48e-13 74.7
Msa0079130 MtrunA17_Chr3g0122391 23.810 168 128 0 352 519 419 586 9.05e-13 72.4
Msa0079130 MtrunA17_Chr8g0371601 23.544 395 246 15 362 717 460 837 2.57e-13 73.9
Msa0079130 MtrunA17_Chr8g0371601 33.077 130 62 3 636 744 1028 1153 6.82e-12 69.3
Msa0079130 MtrunA17_Chr8g0392301 25.000 208 153 1 352 556 362 569 4.37e-13 73.2
Msa0079130 MtrunA17_Chr3g0136601 26.531 196 128 5 329 519 331 515 2.50e-11 67.4
Msa0079130 MtrunA17_Chr5g0405701 24.274 379 229 13 362 700 498 858 4.30e-11 67.0
Msa0079130 MtrunA17_Chr1g0150511 25.128 195 132 4 329 519 337 521 8.19e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0079130 AT3G04580.2 59.813 749 286 8 25 762 22 766 0.0 872
Msa0079130 AT3G04580.1 59.813 749 286 8 25 762 22 766 0.0 872
Msa0079130 AT3G23150.1 51.018 786 345 14 4 764 3 773 0.0 726
Msa0079130 AT3G23150.2 52.333 600 260 10 4 589 3 590 0.0 573
Msa0079130 AT1G04310.1 46.772 635 305 10 4 619 3 623 4.42e-178 525
Msa0079130 AT1G04310.2 46.772 635 305 10 4 619 3 623 4.42e-178 525
Msa0079130 AT1G66340.1 40.162 742 414 15 30 757 4 729 4.71e-168 503
Msa0079130 AT2G40940.1 37.479 603 349 14 31 618 3 592 6.52e-110 348
Msa0079130 AT5G35750.1 23.823 361 224 9 353 668 567 921 4.27e-17 86.7
Msa0079130 AT2G01830.5 25.568 176 131 0 352 527 440 615 1.96e-15 81.3
Msa0079130 AT2G01830.1 25.568 176 131 0 352 527 428 603 1.98e-15 81.3
Msa0079130 AT2G01830.4 25.568 176 131 0 352 527 428 603 1.98e-15 81.3
Msa0079130 AT2G01830.6 25.568 176 131 0 352 527 428 603 1.98e-15 81.3
Msa0079130 AT2G01830.3 25.568 176 131 0 352 527 428 603 1.98e-15 81.3
Msa0079130 AT2G01830.2 25.568 176 131 0 352 527 451 626 2.36e-15 81.3
Msa0079130 AT1G27320.1 25.134 187 140 0 333 519 410 596 4.35e-14 77.0
Msa0079130 AT5G10720.1 23.364 321 207 11 329 633 327 624 4.81e-12 70.1
Msa0079130 AT2G17820.1 23.120 359 225 9 363 684 488 832 1.67e-11 68.6

Find 210 sgRNAs with CRISPR-Local

Find 319 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAAATCTTGAATTATTTA+TGG 0.143992 1_2:-56870078 None:intergenic
CAAGTAATTATGCATATTAT+TGG 0.179884 1_2:+56871694 Msa0079130:CDS
CCCTCTCCTTCTTAGAATTA+AGG 0.206742 1_2:+56870628 Msa0079130:CDS
GGATATCTCTGAAAATAAAA+AGG 0.209690 1_2:+56871510 Msa0079130:CDS
TTCAAAATCTGCACTATATA+AGG 0.240830 1_2:-56873910 None:intergenic
TGCGATCTGCTTCATTGATT+TGG 0.246681 1_2:+56870121 Msa0079130:five_prime_UTR
TGTGAATTTGAATAATCTTT+AGG 0.255453 1_2:-56873344 None:intergenic
TTCATCAGGGTTTGAGTGCC+TGG 0.258763 1_2:+56873466 Msa0079130:CDS
CCATGATTGTGGTTGCATTA+TGG 0.269036 1_2:+56873950 Msa0079130:three_prime_UTR
GATGAAGGAGGATTGGTTTC+CGG 0.271626 1_2:-56873688 None:intergenic
TCCTTTCCTATTGTCTTATT+CGG 0.272642 1_2:+56869957 Msa0079130:five_prime_UTR
GCTATGATCAAAGGCCAATT+AGG 0.272954 1_2:-56873599 None:intergenic
TGTTGAGCTTTCTAAGGCTT+TGG 0.281832 1_2:+56870802 Msa0079130:CDS
TACTCTTGTTGAGCTTTCTA+AGG 0.286989 1_2:+56870796 Msa0079130:CDS
GCGATCTGCTTCATTGATTT+GGG 0.299830 1_2:+56870122 Msa0079130:five_prime_UTR
TGCACCAAACCCTGAGAGTT+TGG 0.309721 1_2:-56873260 None:intergenic
TTTATGTCTACATACTCAAC+TGG 0.311908 1_2:-56871826 None:intergenic
GGAAATTCAATGGCCCTAAT+TGG 0.315301 1_2:+56873585 Msa0079130:CDS
GGATGCTTACTAGGGAAATT+AGG 0.316546 1_2:+56870741 Msa0079130:CDS
TAAAATCTTGAATTATTTAT+GGG 0.318268 1_2:-56870077 None:intergenic
ATGTTATGCTATACTAGTTT+TGG 0.328451 1_2:+56871123 Msa0079130:CDS
CTCGTACTGTGCATCCTCCT+TGG 0.328507 1_2:-56869886 None:intergenic
GATTATTCAAATTCACAGTT+TGG 0.328563 1_2:+56873350 Msa0079130:CDS
AGGAAGCTAGTTGGCATGTT+AGG 0.342538 1_2:+56870720 Msa0079130:CDS
AGGACTGAACAAAAGATTAT+TGG 0.343143 1_2:+56871433 Msa0079130:CDS
CAGATGATGATAGTTTAAAT+AGG 0.352906 1_2:+56873393 Msa0079130:CDS
ACTGACTATTTGTAAACAAT+TGG 0.356684 1_2:-56873836 None:intergenic
ACTTCAAAACCATCCATTTC+AGG 0.357064 1_2:-56873548 None:intergenic
ATCTGTTGTTTCGTTGAAAT+CGG 0.358826 1_2:-56871889 None:intergenic
ATTTGCATAATTGTGCTGTT+TGG 0.362682 1_2:+56870825 Msa0079130:CDS
TTCCTTATCTCCAACACATC+AGG 0.366420 1_2:-56870944 None:intergenic
TTCTTCCAGGTTCGGACTCT+AGG 0.375382 1_2:+56871146 Msa0079130:CDS
CTAGTAACAGCAGTTTCATC+AGG 0.380902 1_2:+56873452 Msa0079130:CDS
CAGGTTCGGACTCTAGGGTT+TGG 0.381488 1_2:+56871152 Msa0079130:CDS
GGCATGTTAGGATGCTTACT+AGG 0.396870 1_2:+56870732 Msa0079130:CDS
TGGAATTGGGGCAAGAAGTT+GGG 0.397658 1_2:+56870681 Msa0079130:CDS
TCATGAATTGAAATCGGATT+CGG 0.398997 1_2:+56870883 Msa0079130:CDS
TTTGACTCATGAATTGAAAT+CGG 0.399140 1_2:+56870877 Msa0079130:CDS
GAATCACAACAGTGAATCTA+AGG 0.402957 1_2:+56871924 Msa0079130:CDS
ATGGAATTGGGGCAAGAAGT+TGG 0.404627 1_2:+56870680 Msa0079130:CDS
GTCCATGGCTCATCACTGTT+TGG 0.409431 1_2:-56871351 None:intergenic
CCCTCAACATGGAATGTAGA+AGG 0.409888 1_2:-56871561 None:intergenic
CATGAATTGAAATCGGATTC+GGG 0.409935 1_2:+56870884 Msa0079130:CDS
AGATAATGCAAGGTAATATA+TGG 0.410537 1_2:+56873231 Msa0079130:intron
AGGCAGAATGTGATGGAATT+GGG 0.410985 1_2:+56870668 Msa0079130:CDS
AGTTGAGGTGGTGGCTGATC+AGG 0.412583 1_2:+56871195 Msa0079130:CDS
GAGGCAGAATGTGATGGAAT+TGG 0.412904 1_2:+56870667 Msa0079130:CDS
ACAAAGTAAAGAAGCTCAAT+TGG 0.414136 1_2:-56870407 None:intergenic
TTGAAGTGGCGGCAAGGATC+AGG 0.415267 1_2:+56873564 Msa0079130:CDS
TCGTACTGTGCATCCTCCTT+GGG 0.425837 1_2:-56869885 None:intergenic
ATTACCAAACTCTCAGGGTT+TGG 0.429450 1_2:+56873256 Msa0079130:CDS
ATGGATATTACCAAACTCTC+AGG 0.429769 1_2:+56873250 Msa0079130:CDS
AGCATACACACAATCCTTGT+TGG 0.430934 1_2:+56870338 Msa0079130:CDS
CCTTCTACATTCCATGTTGA+GGG 0.431332 1_2:+56871561 Msa0079130:CDS
ATCTCTCTCCTATCATCATT+CGG 0.433427 1_2:-56870851 None:intergenic
ACCTCAACTATCTCCATCTC+TGG 0.436575 1_2:-56871181 None:intergenic
TTGTGTGTGTATCAAGGGTT+TGG 0.438334 1_2:+56871607 Msa0079130:CDS
GCAACTCCTAGTTTAGATTC+AGG 0.441706 1_2:-56870992 None:intergenic
TTTGAGACTGTTGCAATGCT+CGG 0.446015 1_2:-56871291 None:intergenic
GAAGAACCGAATAAGACAAT+AGG 0.446043 1_2:-56869963 None:intergenic
CAAACCCTAGAGTCCGAACC+TGG 0.447027 1_2:-56871151 None:intergenic
GAAAGCAAGAGTTGAAAAGA+AGG 0.447107 1_2:-56870536 None:intergenic
TAAGGAAAACTAAAGGGGTT+AGG 0.448583 1_2:+56870960 Msa0079130:CDS
CTATGATCAAAGGCCAATTA+GGG 0.451338 1_2:-56873598 None:intergenic
AAAATAGCTTATAGAGAACT+TGG 0.454392 1_2:+56873800 Msa0079130:three_prime_UTR
CTGGGTGCTATAAGTGGCTC+TGG 0.456114 1_2:+56873485 Msa0079130:CDS
CTTCTTCTAAAGTTTCAGAT+AGG 0.459490 1_2:+56873293 Msa0079130:CDS
TACAAGTGAGGGTGGTGATA+AGG 0.459678 1_2:+56871768 Msa0079130:CDS
GAACGCGATGATGGCCAGCC+AGG 0.462578 1_2:+56871315 Msa0079130:CDS
TGGAGATAAGGAAAACTAAA+GGG 0.470604 1_2:+56870954 Msa0079130:CDS
TAATGCAGAAGAGCAAGTTA+AGG 0.472874 1_2:+56873631 Msa0079130:CDS
AGACATTCACATGCCTGAAA+TGG 0.474093 1_2:+56873535 Msa0079130:CDS
TCCTTCTACATTCCATGTTG+AGG 0.474448 1_2:+56871560 Msa0079130:CDS
GTTGCGAGTAGTGGCGGTGG+GGG 0.474504 1_2:+56871010 Msa0079130:CDS
GGAGTTGCGAGTAGTGGCGG+TGG 0.474808 1_2:+56871007 Msa0079130:CDS
CAAAGGAGGGACGCCGGAGT+TGG 0.475152 1_2:+56871093 Msa0079130:CDS
CTTCATGTTTCGAATTTCAA+AGG 0.475335 1_2:+56871076 Msa0079130:CDS
AAAGAAGCTACTCGAGAGGC+TGG 0.477400 1_2:+56873424 Msa0079130:CDS
GAGTTGCGAGTAGTGGCGGT+GGG 0.478888 1_2:+56871008 Msa0079130:CDS
CGAGAACCGACGCGTGAGAA+AGG 0.484376 1_2:-56871228 None:intergenic
ACCCTGATGTGTTGGAGATA+AGG 0.484829 1_2:+56870942 Msa0079130:CDS
GAATGACTTCCTAGCCTGGC+TGG 0.485805 1_2:-56871329 None:intergenic
GACTGGGATAATGATGGTTA+TGG 0.486031 1_2:-56874032 None:intergenic
AAAAGATTAAGAAAGGAAAG+TGG 0.488804 1_2:-56869932 None:intergenic
TCATCAGGGTTTGAGTGCCT+GGG 0.491049 1_2:+56873467 Msa0079130:CDS
TCTTCCAGGTTCGGACTCTA+GGG 0.492992 1_2:+56871147 Msa0079130:CDS
AAGTGCTTGTGTGTGTATCA+AGG 0.498129 1_2:+56871601 Msa0079130:CDS
TGGGATTATGAAGAAACAAA+AGG 0.498382 1_2:+56870700 Msa0079130:CDS
TTTGGAATGACTTCCTAGCC+TGG 0.501343 1_2:-56871333 None:intergenic
TTTGGATGCCGAATGATGAT+AGG 0.501945 1_2:+56870843 Msa0079130:CDS
TTGGAGATAAGGAAAACTAA+AGG 0.504670 1_2:+56870953 Msa0079130:CDS
TTGAGGCCTGAATCTAAACT+AGG 0.504811 1_2:+56870986 Msa0079130:CDS
TGAGGAATTTAGCAACAGTA+AGG 0.504921 1_2:-56870559 None:intergenic
AGGCCAATGCATTCAGTTGT+GGG 0.505607 1_2:+56871379 Msa0079130:CDS
CCCTCACCTTAATTCTAAGA+AGG 0.509242 1_2:-56870634 None:intergenic
CCATAATGCAACCACAATCA+TGG 0.509533 1_2:-56873950 None:intergenic
CGATGATGGCCAGCCAGGCT+AGG 0.509807 1_2:+56871320 Msa0079130:CDS
TGAAGAAACAACAATTTGAA+AGG 0.513054 1_2:-56870446 None:intergenic
GAGTTTAGTAAACGATGTAA+TGG 0.515957 1_2:+56871489 Msa0079130:CDS
AACTCTCAGGGTTTGGTGCA+AGG 0.516591 1_2:+56873263 Msa0079130:CDS
GAGTGCCTGGGTGCTATAAG+TGG 0.519942 1_2:+56873479 Msa0079130:CDS
GCATTGGCCTCCTCAGTCCA+TGG 0.520880 1_2:-56871366 None:intergenic
AAGGATAGATGCATGCTGGC+TGG 0.523016 1_2:+56873650 Msa0079130:CDS
GTCTCAAAAGAACGCGATGA+TGG 0.526187 1_2:+56871306 Msa0079130:CDS
TTTCTTGAGGCAGAATGTGA+TGG 0.526914 1_2:+56870661 Msa0079130:CDS
GAGAACCGACGCGTGAGAAA+GGG 0.532015 1_2:-56871227 None:intergenic
TGTTGAACACGCGTGACCGA+GGG 0.532022 1_2:+56871722 Msa0079130:CDS
GCTATCTGATGAAGGAGGAT+TGG 0.533500 1_2:-56873695 None:intergenic
TGTGATTGACCCTGATGTGT+TGG 0.534459 1_2:+56870934 Msa0079130:CDS
TATGTGCCGGAGGTTGGTAC+AGG 0.536453 1_2:+56871963 Msa0079130:CDS
GCAAGGATCAGGAAATTCAA+TGG 0.537123 1_2:+56873575 Msa0079130:CDS
CTCTCTGACAATTGATGATG+CGG 0.537732 1_2:-56870011 None:intergenic
CATAATATAGAATTGTAAAA+CGG 0.538369 1_2:+56874089 Msa0079130:three_prime_UTR
CTTCAATATGTGCCGGAGGT+TGG 0.538586 1_2:+56871957 Msa0079130:CDS
GCTATAAGAGCTATGATCAA+AGG 0.539373 1_2:-56873608 None:intergenic
CAACGAAACAACAGATTGGT+AGG 0.539988 1_2:+56871896 Msa0079130:CDS
CATACCACATAGAACTATGA+AGG 0.542546 1_2:-56870477 None:intergenic
GAGGCCAATGCATTCAGTTG+TGG 0.544582 1_2:+56871378 Msa0079130:CDS
TTGTTGAACACGCGTGACCG+AGG 0.544947 1_2:+56871721 Msa0079130:CDS
TTGTGCTGTGGCCATGATTG+TGG 0.545057 1_2:+56873939 Msa0079130:three_prime_UTR
GACTGTGACTGGGATAATGA+TGG 0.545260 1_2:-56874038 None:intergenic
GGTTTGGACCGCTCCAGAGA+TGG 0.547219 1_2:+56871168 Msa0079130:CDS
ATTTCAACGAAACAACAGAT+TGG 0.547312 1_2:+56871892 Msa0079130:CDS
TGTTTCAAGAGGGTAATATG+AGG 0.554581 1_2:+56871413 Msa0079130:CDS
AACATGTATCTTTCAAGCGA+TGG 0.555713 1_2:-56873317 None:intergenic
TGCATGCTGGCTGGAATGAA+TGG 0.556631 1_2:+56873659 Msa0079130:CDS
GTTCATCCGCTATCTGATGA+AGG 0.557017 1_2:-56873703 None:intergenic
AACATATCGAGAGAGAATGA+AGG 0.557117 1_2:-56869986 None:intergenic
AGTGCTTGTGTGTGTATCAA+GGG 0.557402 1_2:+56871602 Msa0079130:CDS
CTGGAATGAATGGTGTGATC+CGG 0.559043 1_2:+56873669 Msa0079130:CDS
AGTTGCGAGTAGTGGCGGTG+GGG 0.561735 1_2:+56871009 Msa0079130:CDS
ATGTTTCGAATTTCAAAGGA+GGG 0.563184 1_2:+56871080 Msa0079130:CDS
GAATTTCAAAGGAGGGACGC+CGG 0.563898 1_2:+56871087 Msa0079130:CDS
CACCTACCTGTACCAACCTC+CGG 0.564583 1_2:-56871969 None:intergenic
AACACATCAGGGTCAATCAC+AGG 0.564986 1_2:-56870932 None:intergenic
AACATGGAATGTAGAAGGAA+AGG 0.568366 1_2:-56871556 None:intergenic
CGTAGCCCTTTCTCACGCGT+CGG 0.568817 1_2:+56871222 Msa0079130:CDS
AAATTCGAAACATGAAGCAT+CGG 0.568829 1_2:-56871070 None:intergenic
TATTCAAATTCACAGTTTGG+AGG 0.570060 1_2:+56873353 Msa0079130:CDS
ATCCCCACAACTGAATGCAT+TGG 0.570182 1_2:-56871382 None:intergenic
CATGTTTCGAATTTCAAAGG+AGG 0.571827 1_2:+56871079 Msa0079130:CDS
GCATGTTAGGATGCTTACTA+GGG 0.572208 1_2:+56870733 Msa0079130:CDS
AGATCGGTCCTACTTCGTGC+AGG 0.573170 1_2:+56873728 Msa0079130:CDS
TGCTCTTGTGTCGTGTGCAA+CGG 0.573831 1_2:+56870583 Msa0079130:CDS
TTTGACAAGGTCGAGGCCCA+AGG 0.574834 1_2:+56869869 Msa0079130:five_prime_UTR
AGAAACAAAAGGAAGCTAGT+TGG 0.575842 1_2:+56870711 Msa0079130:CDS
ACCTTAATTCTAAGAAGGAG+AGG 0.576433 1_2:-56870629 None:intergenic
ATTCACATGCCTGAAATGGA+TGG 0.579300 1_2:+56873539 Msa0079130:CDS
TTCCAAACAGTGATGAGCCA+TGG 0.580133 1_2:+56871349 Msa0079130:CDS
CCTTAATTCTAAGAAGGAGA+GGG 0.581303 1_2:-56870628 None:intergenic
TCCTTCTTAGAATTAAGGTG+AGG 0.582740 1_2:+56870633 Msa0079130:CDS
CCTTCTTAGAATTAAGGTGA+GGG 0.583317 1_2:+56870634 Msa0079130:CDS
GCTTGAGCTTCAATATGTGC+CGG 0.584592 1_2:+56871950 Msa0079130:CDS
TCCTTATCTCCAACACATCA+GGG 0.586059 1_2:-56870943 None:intergenic
AAAGATTAAGAAAGGAAAGT+GGG 0.589261 1_2:-56869931 None:intergenic
AACTATCTCCATCTCTGGAG+CGG 0.592322 1_2:-56871176 None:intergenic
TGAGGAGTTGGGTGCTGTCG+CGG 0.592472 1_2:+56871036 Msa0079130:CDS
ACCGAATAAGACAATAGGAA+AGG 0.597626 1_2:-56869958 None:intergenic
AGTTAAGGATAGATGCATGC+TGG 0.598062 1_2:+56873646 Msa0079130:CDS
AAGGTTTCATCTCTAACTGA+AGG 0.599231 1_2:-56871537 None:intergenic
TGGATATTACCAAACTCTCA+GGG 0.599355 1_2:+56873251 Msa0079130:CDS
ACATATCGAGAGAGAATGAA+GGG 0.602965 1_2:-56869985 None:intergenic
GGAGATAAGGAAAACTAAAG+GGG 0.605752 1_2:+56870955 Msa0079130:CDS
ATGCTTTCATTGTTTCAAGA+GGG 0.605913 1_2:+56871403 Msa0079130:CDS
AAACTAGGAGTTGCGAGTAG+TGG 0.606504 1_2:+56871001 Msa0079130:CDS
CTAGGAGTTGCGAGTAGTGG+CGG 0.609987 1_2:+56871004 Msa0079130:CDS
AAGAAGCTACTCGAGAGGCT+GGG 0.610653 1_2:+56873425 Msa0079130:CDS
GGTGCTATAAGTGGCTCTGG+TGG 0.610827 1_2:+56873488 Msa0079130:CDS
TAGTAACAGCAGTTTCATCA+GGG 0.611000 1_2:+56873453 Msa0079130:CDS
ATAGCCTTCATAGTTCTATG+TGG 0.611293 1_2:+56870473 Msa0079130:CDS
AGGTAAATCTGCAACTCCGT+GGG 0.612678 1_2:+56869907 Msa0079130:five_prime_UTR
AGAAAGGAAAGTGGGTCCCA+CGG 0.614399 1_2:-56869923 None:intergenic
AATCTTATGCAGATAATGCA+AGG 0.616623 1_2:+56873221 Msa0079130:intron
GAGGAATTTAGCAACAGTAA+GGG 0.621503 1_2:-56870558 None:intergenic
GATGCTTTCATTGTTTCAAG+AGG 0.621734 1_2:+56871402 Msa0079130:CDS
CAAGGAGGATGCACAGTACG+AGG 0.621953 1_2:+56869887 Msa0079130:five_prime_UTR
GATGGAGATAGTTGAGGTGG+TGG 0.622877 1_2:+56871186 Msa0079130:CDS
TCACAACAGTGAATCTAAGG+AGG 0.625084 1_2:+56871927 Msa0079130:CDS
GATAGCGGATGAACTTAGAT+CGG 0.629033 1_2:+56873712 Msa0079130:CDS
GCAAGCGGCTTCCCTCAACA+TGG 0.629945 1_2:-56871572 None:intergenic
CAAGCACTTAGCAATGCAAG+CGG 0.631343 1_2:-56871587 None:intergenic
GGTGACACAATGTTGAAAGT+CGG 0.632956 1_2:+56871454 Msa0079130:CDS
CTAAGAAGGAGAGGGATCAA+CGG 0.639905 1_2:-56870620 None:intergenic
TAACATGTATCAACCAACTC+CGG 0.640709 1_2:-56871106 None:intergenic
CACAACAGTGAATCTAAGGA+GGG 0.640846 1_2:+56871928 Msa0079130:CDS
TCCAGAGATGGAGATAGTTG+AGG 0.641469 1_2:+56871180 Msa0079130:CDS
GGCCAATGCATTCAGTTGTG+GGG 0.642247 1_2:+56871380 Msa0079130:CDS
TGAGCTTCAATATGTGCCGG+AGG 0.643404 1_2:+56871953 Msa0079130:CDS
TTTGAATTGTGATTGTGCTG+TGG 0.646122 1_2:+56873927 Msa0079130:three_prime_UTR
AGAGATGGAGATAGTTGAGG+TGG 0.648766 1_2:+56871183 Msa0079130:CDS
ATAGTACTTTGACAAGGTCG+AGG 0.648946 1_2:+56869862 Msa0079130:five_prime_UTR
GGCAGAATGTGATGGAATTG+GGG 0.651385 1_2:+56870669 Msa0079130:CDS
TTATGTCTACATACTCAACT+GGG 0.652246 1_2:-56871825 None:intergenic
CAGTGATGAGCCATGGACTG+AGG 0.655532 1_2:+56871356 Msa0079130:CDS
GAGGTAAATCTGCAACTCCG+TGG 0.656593 1_2:+56869906 Msa0079130:five_prime_UTR
TGAGGTGGTGGCTGATCAGG+TGG 0.658305 1_2:+56871198 Msa0079130:CDS
CGAAACAACAGATTGGTAGG+AGG 0.659295 1_2:+56871899 Msa0079130:CDS
CATCTGCTAGCAAAATCTTG+AGG 0.670396 1_2:-56873376 None:intergenic
CCACTGTAACTGTGATGATG+AGG 0.670665 1_2:+56870304 Msa0079130:CDS
TGATGAGCCATGGACTGAGG+AGG 0.672113 1_2:+56871359 Msa0079130:CDS
CCTCATCATCACAGTTACAG+TGG 0.677470 1_2:-56870304 None:intergenic
CAGAGCCACTTATAGCACCC+AGG 0.678501 1_2:-56873484 None:intergenic
CATCCGCTATCTGATGAAGG+AGG 0.680590 1_2:-56873700 None:intergenic
CGACGCGTGAGAAAGGGCTA+CGG 0.681594 1_2:-56871221 None:intergenic
AATCCTCCTTCATCAGATAG+CGG 0.688493 1_2:+56873697 Msa0079130:CDS
GACAAGGTCGAGGCCCAAGG+AGG 0.698397 1_2:+56869872 Msa0079130:five_prime_UTR
TGACAAAGAAGCTACTCGAG+AGG 0.707649 1_2:+56873420 Msa0079130:CDS
AGAAGGAGAGGGATCAACGG+CGG 0.710786 1_2:-56870617 None:intergenic
ATGAACATAGTACTTTGACA+AGG 0.749739 1_2:+56869856 Msa0079130:five_prime_UTR
CACACGACACAAGAGCAGTG+AGG 0.767368 1_2:-56870577 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATCTTGAATTATTTAT+GGG - chr1_2:56870080-56870099 None:intergenic 10.0%
!! TTAAAATCTTGAATTATTTA+TGG - chr1_2:56870081-56870100 None:intergenic 10.0%
!! ATTAATTAAATAATTACACA+GGG - chr1_2:56873156-56873175 None:intergenic 10.0%
!! TGTAATTATTTAATTAATCA+TGG + chr1_2:56873158-56873177 Msa0079130:intron 10.0%
!! ATTATAAGTATAAAGAAGTA+AGG - chr1_2:56873021-56873040 None:intergenic 15.0%
!! TAGTGCTTTAATAAAATAAT+TGG - chr1_2:56873049-56873068 None:intergenic 15.0%
!! GATTAATTAAATAATTACAC+AGG - chr1_2:56873157-56873176 None:intergenic 15.0%
!! CATAATATAGAATTGTAAAA+CGG + chr1_2:56874089-56874108 Msa0079130:three_prime_UTR 15.0%
!!! TAATTCAAGATTTTAAGAAC+TGG + chr1_2:56870085-56870104 Msa0079130:five_prime_UTR 20.0%
!!! AATTCAAGATTTTAAGAACT+GGG + chr1_2:56870086-56870105 Msa0079130:five_prime_UTR 20.0%
!!! GATATCTCTGAAAATAAAAA+GGG + chr1_2:56871511-56871530 Msa0079130:CDS 20.0%
!! CAAGTAATTATGCATATTAT+TGG + chr1_2:56871694-56871713 Msa0079130:CDS 20.0%
!!! AAATTTGATTTTCAGATTAC+TGG + chr1_2:56871847-56871866 Msa0079130:CDS 20.0%
!!! AATTTTACATCCTTAATGAA+TGG - chr1_2:56872209-56872228 None:intergenic 20.0%
!! TTTCTTATGTTGAAAGATTT+AGG - chr1_2:56872541-56872560 None:intergenic 20.0%
!!! CTTTTATCTTAATAGTATCA+CGG + chr1_2:56872597-56872616 Msa0079130:intron 20.0%
!!! TAATTTTGTTTTCCTCTTTT+AGG + chr1_2:56872686-56872705 Msa0079130:intron 20.0%
!! TGTGAATTTGAATAATCTTT+AGG - chr1_2:56873347-56873366 None:intergenic 20.0%
! AAAGATTAAGAAAGGAAAGT+GGG - chr1_2:56869934-56869953 None:intergenic 25.0%
! AAAAGATTAAGAAAGGAAAG+TGG - chr1_2:56869935-56869954 None:intergenic 25.0%
! AAGGAGAAAAAGATTAAGAA+AGG - chr1_2:56869942-56869961 None:intergenic 25.0%
! TGAAGAAACAACAATTTGAA+AGG - chr1_2:56870449-56870468 None:intergenic 25.0%
! TTTGACTCATGAATTGAAAT+CGG + chr1_2:56870877-56870896 Msa0079130:CDS 25.0%
!!! ATGTTATGCTATACTAGTTT+TGG + chr1_2:56871123-56871142 Msa0079130:CDS 25.0%
!! GGATATCTCTGAAAATAAAA+AGG + chr1_2:56871510-56871529 Msa0079130:CDS 25.0%
! GATAAGGATGACAAAAAAAT+TGG + chr1_2:56871784-56871803 Msa0079130:CDS 25.0%
! ATGACAAAAAAATTGGTGTA+TGG + chr1_2:56871791-56871810 Msa0079130:CDS 25.0%
! CACTGTCTATATTATATATG+TGG + chr1_2:56871995-56872014 Msa0079130:intron 25.0%
! AATGCTTAAAGAATGATGTT+TGG + chr1_2:56872084-56872103 Msa0079130:intron 25.0%
! TTTCTTCAAACCATTCATTA+AGG + chr1_2:56872196-56872215 Msa0079130:intron 25.0%
!! AAAGATTTAGGTTATAACAG+AGG - chr1_2:56872529-56872548 None:intergenic 25.0%
! CGTGATACTATTAAGATAAA+AGG - chr1_2:56872599-56872618 None:intergenic 25.0%
!!! TTTTGTAGTCTTGTTCATAT+TGG - chr1_2:56872853-56872872 None:intergenic 25.0%
!! TTCTGACTTTATTTACATTG+TGG + chr1_2:56873198-56873217 Msa0079130:intron 25.0%
! AGATAATGCAAGGTAATATA+TGG + chr1_2:56873231-56873250 Msa0079130:intron 25.0%
! GATTATTCAAATTCACAGTT+TGG + chr1_2:56873350-56873369 Msa0079130:CDS 25.0%
! CAGATGATGATAGTTTAAAT+AGG + chr1_2:56873393-56873412 Msa0079130:CDS 25.0%
! AAAATAGCTTATAGAGAACT+TGG + chr1_2:56873800-56873819 Msa0079130:three_prime_UTR 25.0%
! ACTGACTATTTGTAAACAAT+TGG - chr1_2:56873839-56873858 None:intergenic 25.0%
! TTCAAAATCTGCACTATATA+AGG - chr1_2:56873913-56873932 None:intergenic 25.0%
ATGAACATAGTACTTTGACA+AGG + chr1_2:56869856-56869875 Msa0079130:five_prime_UTR 30.0%
! TCCTTTCCTATTGTCTTATT+CGG + chr1_2:56869957-56869976 Msa0079130:five_prime_UTR 30.0%
!! ATTTGGGTCATTTTCTAATC+AGG + chr1_2:56870138-56870157 Msa0079130:five_prime_UTR 30.0%
ACAAAGTAAAGAAGCTCAAT+TGG - chr1_2:56870410-56870429 None:intergenic 30.0%
TGGGATTATGAAGAAACAAA+AGG + chr1_2:56870700-56870719 Msa0079130:CDS 30.0%
! ATTTGCATAATTGTGCTGTT+TGG + chr1_2:56870825-56870844 Msa0079130:CDS 30.0%
TCATGAATTGAAATCGGATT+CGG + chr1_2:56870883-56870902 Msa0079130:CDS 30.0%
TTGGAGATAAGGAAAACTAA+AGG + chr1_2:56870953-56870972 Msa0079130:CDS 30.0%
TGGAGATAAGGAAAACTAAA+GGG + chr1_2:56870954-56870973 Msa0079130:CDS 30.0%
AAATTCGAAACATGAAGCAT+CGG - chr1_2:56871073-56871092 None:intergenic 30.0%
CTTCATGTTTCGAATTTCAA+AGG + chr1_2:56871076-56871095 Msa0079130:CDS 30.0%
ATGTTTCGAATTTCAAAGGA+GGG + chr1_2:56871080-56871099 Msa0079130:CDS 30.0%
ATGCTTTCATTGTTTCAAGA+GGG + chr1_2:56871403-56871422 Msa0079130:CDS 30.0%
AGGACTGAACAAAAGATTAT+TGG + chr1_2:56871433-56871452 Msa0079130:CDS 30.0%
GAGTTTAGTAAACGATGTAA+TGG + chr1_2:56871489-56871508 Msa0079130:CDS 30.0%
! ATCTCTGAAAATAAAAAGGG+TGG + chr1_2:56871514-56871533 Msa0079130:CDS 30.0%
! TCTTTGCCTGAAAAAGTTTT+AGG + chr1_2:56871652-56871671 Msa0079130:CDS 30.0%
TTATGTCTACATACTCAACT+GGG - chr1_2:56871828-56871847 None:intergenic 30.0%
TTTATGTCTACATACTCAAC+TGG - chr1_2:56871829-56871848 None:intergenic 30.0%
!! ATCTGTTGTTTCGTTGAAAT+CGG - chr1_2:56871892-56871911 None:intergenic 30.0%
ATTTCAACGAAACAACAGAT+TGG + chr1_2:56871892-56871911 Msa0079130:CDS 30.0%
AGACATAACATAGACAATCA+AGG - chr1_2:56872031-56872050 None:intergenic 30.0%
! AAGAAACTGATTCTACGAAT+CGG + chr1_2:56872367-56872386 Msa0079130:intron 30.0%
TTGTGTGATGTAAACTCAAA+AGG - chr1_2:56872653-56872672 None:intergenic 30.0%
! GTGTCTTTTCTTGAATTGTA+AGG + chr1_2:56872805-56872824 Msa0079130:intron 30.0%
! TCCTTTTCATCAATGGAAAT+AGG + chr1_2:56872882-56872901 Msa0079130:intron 30.0%
ACCTATTTCCATTGATGAAA+AGG - chr1_2:56872886-56872905 None:intergenic 30.0%
! ATAAGAAAGCTTGTGCTTTT+TGG + chr1_2:56872911-56872930 Msa0079130:intron 30.0%
!! TAAGAAAGCTTGTGCTTTTT+GGG + chr1_2:56872912-56872931 Msa0079130:intron 30.0%
! ATCTTTTGTGCCTTAAAATC+TGG + chr1_2:56872985-56873004 Msa0079130:intron 30.0%
! TCCTACTTTACCAGATTTTA+AGG - chr1_2:56872998-56873017 None:intergenic 30.0%
! GAATAACAAGTTCTGATTTG+TGG - chr1_2:56873094-56873113 None:intergenic 30.0%
AATCTTATGCAGATAATGCA+AGG + chr1_2:56873221-56873240 Msa0079130:intron 30.0%
!! CTTCTTCTAAAGTTTCAGAT+AGG + chr1_2:56873293-56873312 Msa0079130:CDS 30.0%
TATTCAAATTCACAGTTTGG+AGG + chr1_2:56873353-56873372 Msa0079130:CDS 30.0%
!! GTTCTCTATAAGCTATTTTG+AGG - chr1_2:56873799-56873818 None:intergenic 30.0%
! TCTTTTGTCACAACTTATTG+TGG + chr1_2:56873887-56873906 Msa0079130:three_prime_UTR 30.0%
!!! TGTAAAACGGTGCTTTTTTA+AGG + chr1_2:56874102-56874121 Msa0079130:three_prime_UTR 30.0%
ACCGAATAAGACAATAGGAA+AGG - chr1_2:56869961-56869980 None:intergenic 35.0%
GAAGAACCGAATAAGACAAT+AGG - chr1_2:56869966-56869985 None:intergenic 35.0%
ACATATCGAGAGAGAATGAA+GGG - chr1_2:56869988-56870007 None:intergenic 35.0%
AACATATCGAGAGAGAATGA+AGG - chr1_2:56869989-56870008 None:intergenic 35.0%
! ATAGCCTTCATAGTTCTATG+TGG + chr1_2:56870473-56870492 Msa0079130:CDS 35.0%
CATACCACATAGAACTATGA+AGG - chr1_2:56870480-56870499 None:intergenic 35.0%
GAAAGCAAGAGTTGAAAAGA+AGG - chr1_2:56870539-56870558 None:intergenic 35.0%
GAGGAATTTAGCAACAGTAA+GGG - chr1_2:56870561-56870580 None:intergenic 35.0%
TGAGGAATTTAGCAACAGTA+AGG - chr1_2:56870562-56870581 None:intergenic 35.0%
! CCTTAATTCTAAGAAGGAGA+GGG - chr1_2:56870631-56870650 None:intergenic 35.0%
! ACCTTAATTCTAAGAAGGAG+AGG - chr1_2:56870632-56870651 None:intergenic 35.0%
TCCTTCTTAGAATTAAGGTG+AGG + chr1_2:56870633-56870652 Msa0079130:CDS 35.0%
CCTTCTTAGAATTAAGGTGA+GGG + chr1_2:56870634-56870653 Msa0079130:CDS 35.0%
AGAAACAAAAGGAAGCTAGT+TGG + chr1_2:56870711-56870730 Msa0079130:CDS 35.0%
TACTCTTGTTGAGCTTTCTA+AGG + chr1_2:56870796-56870815 Msa0079130:CDS 35.0%
ATCTCTCTCCTATCATCATT+CGG - chr1_2:56870854-56870873 None:intergenic 35.0%
CATGAATTGAAATCGGATTC+GGG + chr1_2:56870884-56870903 Msa0079130:CDS 35.0%
GGAGATAAGGAAAACTAAAG+GGG + chr1_2:56870955-56870974 Msa0079130:CDS 35.0%
TAAGGAAAACTAAAGGGGTT+AGG + chr1_2:56870960-56870979 Msa0079130:CDS 35.0%
CATGTTTCGAATTTCAAAGG+AGG + chr1_2:56871079-56871098 Msa0079130:CDS 35.0%
TAACATGTATCAACCAACTC+CGG - chr1_2:56871109-56871128 None:intergenic 35.0%
!!! ATACTAGTTTTGGTTCTTCC+AGG + chr1_2:56871133-56871152 Msa0079130:CDS 35.0%
GATGCTTTCATTGTTTCAAG+AGG + chr1_2:56871402-56871421 Msa0079130:CDS 35.0%
TGTTTCAAGAGGGTAATATG+AGG + chr1_2:56871413-56871432 Msa0079130:CDS 35.0%
AAGGTTTCATCTCTAACTGA+AGG - chr1_2:56871540-56871559 None:intergenic 35.0%
AACATGGAATGTAGAAGGAA+AGG - chr1_2:56871559-56871578 None:intergenic 35.0%
!! TCATCGCCTAAAACTTTTTC+AGG - chr1_2:56871661-56871680 None:intergenic 35.0%
GAATCACAACAGTGAATCTA+AGG + chr1_2:56871924-56871943 Msa0079130:CDS 35.0%
GCAATAACTGATCTCATATG+AGG + chr1_2:56872285-56872304 Msa0079130:intron 35.0%
ATCAGTTTCTTGCAATTGCA+GGG - chr1_2:56872358-56872377 None:intergenic 35.0%
AATCAGTTTCTTGCAATTGC+AGG - chr1_2:56872359-56872378 None:intergenic 35.0%
AAAAAAGAGTCTCGACACAA+CGG - chr1_2:56872429-56872448 None:intergenic 35.0%
GCTCTTAGCTGAAATTAGTA+TGG - chr1_2:56872496-56872515 None:intergenic 35.0%
! GATTTAGGTTATAACAGAGG+AGG - chr1_2:56872526-56872545 None:intergenic 35.0%
! TCTCACTTCCTTTTCATCAA+TGG + chr1_2:56872875-56872894 Msa0079130:intron 35.0%
!! AAGAAAGCTTGTGCTTTTTG+GGG + chr1_2:56872913-56872932 Msa0079130:intron 35.0%
GCCTTAAAATCTGGTAAAGT+AGG + chr1_2:56872994-56873013 Msa0079130:intron 35.0%
ATGGATATTACCAAACTCTC+AGG + chr1_2:56873250-56873269 Msa0079130:CDS 35.0%
TGGATATTACCAAACTCTCA+GGG + chr1_2:56873251-56873270 Msa0079130:CDS 35.0%
AACATGTATCTTTCAAGCGA+TGG - chr1_2:56873320-56873339 None:intergenic 35.0%
TAGTAACAGCAGTTTCATCA+GGG + chr1_2:56873453-56873472 Msa0079130:CDS 35.0%
ACTTCAAAACCATCCATTTC+AGG - chr1_2:56873551-56873570 None:intergenic 35.0%
!!! TGAAATGGATGGTTTTGAAG+TGG + chr1_2:56873550-56873569 Msa0079130:CDS 35.0%
CTATGATCAAAGGCCAATTA+GGG - chr1_2:56873601-56873620 None:intergenic 35.0%
GCTATAAGAGCTATGATCAA+AGG - chr1_2:56873611-56873630 None:intergenic 35.0%
TAATGCAGAAGAGCAAGTTA+AGG + chr1_2:56873631-56873650 Msa0079130:CDS 35.0%
TTTGAATTGTGATTGTGCTG+TGG + chr1_2:56873927-56873946 Msa0079130:three_prime_UTR 35.0%
!!! GTAACATTTTGACTGTGACT+GGG - chr1_2:56874051-56874070 None:intergenic 35.0%
!!! TGTAACATTTTGACTGTGAC+TGG - chr1_2:56874052-56874071 None:intergenic 35.0%
ATAGTACTTTGACAAGGTCG+AGG + chr1_2:56869862-56869881 Msa0079130:five_prime_UTR 40.0%
!! CTCTCTGACAATTGATGATG+CGG - chr1_2:56870014-56870033 None:intergenic 40.0%
! TGCGATCTGCTTCATTGATT+TGG + chr1_2:56870121-56870140 Msa0079130:five_prime_UTR 40.0%
!! GCGATCTGCTTCATTGATTT+GGG + chr1_2:56870122-56870141 Msa0079130:five_prime_UTR 40.0%
AGCATACACACAATCCTTGT+TGG + chr1_2:56870338-56870357 Msa0079130:CDS 40.0%
!!! CACTGACTTTTTGACCAACA+AGG - chr1_2:56870355-56870374 None:intergenic 40.0%
CCCTCTCCTTCTTAGAATTA+AGG + chr1_2:56870628-56870647 Msa0079130:CDS 40.0%
! CCCTCACCTTAATTCTAAGA+AGG - chr1_2:56870637-56870656 None:intergenic 40.0%
TTTCTTGAGGCAGAATGTGA+TGG + chr1_2:56870661-56870680 Msa0079130:CDS 40.0%
! AGGCAGAATGTGATGGAATT+GGG + chr1_2:56870668-56870687 Msa0079130:CDS 40.0%
GCATGTTAGGATGCTTACTA+GGG + chr1_2:56870733-56870752 Msa0079130:CDS 40.0%
GGATGCTTACTAGGGAAATT+AGG + chr1_2:56870741-56870760 Msa0079130:CDS 40.0%
!! TGTTGAGCTTTCTAAGGCTT+TGG + chr1_2:56870802-56870821 Msa0079130:CDS 40.0%
TTTGGATGCCGAATGATGAT+AGG + chr1_2:56870843-56870862 Msa0079130:CDS 40.0%
TCCTTATCTCCAACACATCA+GGG - chr1_2:56870946-56870965 None:intergenic 40.0%
TTCCTTATCTCCAACACATC+AGG - chr1_2:56870947-56870966 None:intergenic 40.0%
! CTAAAGGGGTTAGGATTTTG+AGG + chr1_2:56870969-56870988 Msa0079130:CDS 40.0%
TTGAGGCCTGAATCTAAACT+AGG + chr1_2:56870986-56871005 Msa0079130:CDS 40.0%
GCAACTCCTAGTTTAGATTC+AGG - chr1_2:56870995-56871014 None:intergenic 40.0%
!!! AGTTTTGGTTCTTCCAGGTT+CGG + chr1_2:56871138-56871157 Msa0079130:CDS 40.0%
! TTTGAGACTGTTGCAATGCT+CGG - chr1_2:56871294-56871313 None:intergenic 40.0%
GGTGACACAATGTTGAAAGT+CGG + chr1_2:56871454-56871473 Msa0079130:CDS 40.0%
TCCTTCTACATTCCATGTTG+AGG + chr1_2:56871560-56871579 Msa0079130:CDS 40.0%
CCTTCTACATTCCATGTTGA+GGG + chr1_2:56871561-56871580 Msa0079130:CDS 40.0%
AAGTGCTTGTGTGTGTATCA+AGG + chr1_2:56871601-56871620 Msa0079130:CDS 40.0%
AGTGCTTGTGTGTGTATCAA+GGG + chr1_2:56871602-56871621 Msa0079130:CDS 40.0%
TTGTGTGTGTATCAAGGGTT+TGG + chr1_2:56871607-56871626 Msa0079130:CDS 40.0%
!!! AAGTTTTAGGCGATGAAGCA+AGG + chr1_2:56871665-56871684 Msa0079130:CDS 40.0%
!!! ACCGAGGGAATCTTGTTTTT+CGG + chr1_2:56871737-56871756 Msa0079130:CDS 40.0%
! TCGGGTTTTTGTTACAAGTG+AGG + chr1_2:56871756-56871775 Msa0079130:CDS 40.0%
! CGGGTTTTTGTTACAAGTGA+GGG + chr1_2:56871757-56871776 Msa0079130:CDS 40.0%
! GTTTTTGTTACAAGTGAGGG+TGG + chr1_2:56871760-56871779 Msa0079130:CDS 40.0%
CAACGAAACAACAGATTGGT+AGG + chr1_2:56871896-56871915 Msa0079130:CDS 40.0%
TCACAACAGTGAATCTAAGG+AGG + chr1_2:56871927-56871946 Msa0079130:CDS 40.0%
CACAACAGTGAATCTAAGGA+GGG + chr1_2:56871928-56871947 Msa0079130:CDS 40.0%
TGTTGACCTGCATCTTCATT+TGG + chr1_2:56872121-56872140 Msa0079130:intron 40.0%
GTTGACCTGCATCTTCATTT+GGG + chr1_2:56872122-56872141 Msa0079130:intron 40.0%
TTGATCCCAAATGAAGATGC+AGG - chr1_2:56872130-56872149 None:intergenic 40.0%
GCAACAGATCAGTTATTGGT+CGG - chr1_2:56872324-56872343 None:intergenic 40.0%
ACCAATAACTGATCTGTTGC+AGG + chr1_2:56872324-56872343 Msa0079130:intron 40.0%
AAAAGGATCCTTCCAACATG+GGG - chr1_2:56872636-56872655 None:intergenic 40.0%
CAAAAGGATCCTTCCAACAT+GGG - chr1_2:56872637-56872656 None:intergenic 40.0%
TCAAAAGGATCCTTCCAACA+TGG - chr1_2:56872638-56872657 None:intergenic 40.0%
AAAGCAGATTCTGACATGAC+AGG + chr1_2:56872730-56872749 Msa0079130:intron 40.0%
GGCATCATTAGAGAAACATG+AGG + chr1_2:56872751-56872770 Msa0079130:intron 40.0%
ACACAGAAACTGCATGATTG+TGG + chr1_2:56872783-56872802 Msa0079130:intron 40.0%
!! CTTGTTATTCCCTTGCCTAT+TGG + chr1_2:56873104-56873123 Msa0079130:intron 40.0%
ATTACCAAACTCTCAGGGTT+TGG + chr1_2:56873256-56873275 Msa0079130:CDS 40.0%
CATCTGCTAGCAAAATCTTG+AGG - chr1_2:56873379-56873398 None:intergenic 40.0%
CTAGTAACAGCAGTTTCATC+AGG + chr1_2:56873452-56873471 Msa0079130:CDS 40.0%
AGACATTCACATGCCTGAAA+TGG + chr1_2:56873535-56873554 Msa0079130:CDS 40.0%
ATTCACATGCCTGAAATGGA+TGG + chr1_2:56873539-56873558 Msa0079130:CDS 40.0%
!!! AATGGATGGTTTTGAAGTGG+CGG + chr1_2:56873553-56873572 Msa0079130:CDS 40.0%
GCAAGGATCAGGAAATTCAA+TGG + chr1_2:56873575-56873594 Msa0079130:CDS 40.0%
GGAAATTCAATGGCCCTAAT+TGG + chr1_2:56873585-56873604 Msa0079130:CDS 40.0%
GCTATGATCAAAGGCCAATT+AGG - chr1_2:56873602-56873621 None:intergenic 40.0%
AGTTAAGGATAGATGCATGC+TGG + chr1_2:56873646-56873665 Msa0079130:CDS 40.0%
AATCCTCCTTCATCAGATAG+CGG + chr1_2:56873697-56873716 Msa0079130:CDS 40.0%
!! GATAGCGGATGAACTTAGAT+CGG + chr1_2:56873712-56873731 Msa0079130:CDS 40.0%
CCATAATGCAACCACAATCA+TGG - chr1_2:56873953-56873972 None:intergenic 40.0%
CCATGATTGTGGTTGCATTA+TGG + chr1_2:56873950-56873969 Msa0079130:three_prime_UTR 40.0%
GACTGGGATAATGATGGTTA+TGG - chr1_2:56874035-56874054 None:intergenic 40.0%
AGGTAAATCTGCAACTCCGT+GGG + chr1_2:56869907-56869926 Msa0079130:five_prime_UTR 45.0%
CCTCATCATCACAGTTACAG+TGG - chr1_2:56870307-56870326 None:intergenic 45.0%
! CCACTGTAACTGTGATGATG+AGG + chr1_2:56870304-56870323 Msa0079130:CDS 45.0%
CTAAGAAGGAGAGGGATCAA+CGG - chr1_2:56870623-56870642 None:intergenic 45.0%
! AGGTGAGGGAGATTTTCTTG+AGG + chr1_2:56870648-56870667 Msa0079130:CDS 45.0%
! GAGGCAGAATGTGATGGAAT+TGG + chr1_2:56870667-56870686 Msa0079130:CDS 45.0%
! GGCAGAATGTGATGGAATTG+GGG + chr1_2:56870669-56870688 Msa0079130:CDS 45.0%
ATGGAATTGGGGCAAGAAGT+TGG + chr1_2:56870680-56870699 Msa0079130:CDS 45.0%
TGGAATTGGGGCAAGAAGTT+GGG + chr1_2:56870681-56870700 Msa0079130:CDS 45.0%
AGGAAGCTAGTTGGCATGTT+AGG + chr1_2:56870720-56870739 Msa0079130:CDS 45.0%
GGCATGTTAGGATGCTTACT+AGG + chr1_2:56870732-56870751 Msa0079130:CDS 45.0%
AACACATCAGGGTCAATCAC+AGG - chr1_2:56870935-56870954 None:intergenic 45.0%
TGTGATTGACCCTGATGTGT+TGG + chr1_2:56870934-56870953 Msa0079130:CDS 45.0%
ACCCTGATGTGTTGGAGATA+AGG + chr1_2:56870942-56870961 Msa0079130:CDS 45.0%
AAACTAGGAGTTGCGAGTAG+TGG + chr1_2:56871001-56871020 Msa0079130:CDS 45.0%
! AACTATCTCCATCTCTGGAG+CGG - chr1_2:56871179-56871198 None:intergenic 45.0%
TCCAGAGATGGAGATAGTTG+AGG + chr1_2:56871180-56871199 Msa0079130:CDS 45.0%
ACCTCAACTATCTCCATCTC+TGG - chr1_2:56871184-56871203 None:intergenic 45.0%
AGAGATGGAGATAGTTGAGG+TGG + chr1_2:56871183-56871202 Msa0079130:CDS 45.0%
GTCTCAAAAGAACGCGATGA+TGG + chr1_2:56871306-56871325 Msa0079130:CDS 45.0%
! TTTGGAATGACTTCCTAGCC+TGG - chr1_2:56871336-56871355 None:intergenic 45.0%
TTCCAAACAGTGATGAGCCA+TGG + chr1_2:56871349-56871368 Msa0079130:CDS 45.0%
AGGCCAATGCATTCAGTTGT+GGG + chr1_2:56871379-56871398 Msa0079130:CDS 45.0%
ATCCCCACAACTGAATGCAT+TGG - chr1_2:56871385-56871404 None:intergenic 45.0%
CCCTCAACATGGAATGTAGA+AGG - chr1_2:56871564-56871583 None:intergenic 45.0%
CAAGCACTTAGCAATGCAAG+CGG - chr1_2:56871590-56871609 None:intergenic 45.0%
CCCGAAAAACAAGATTCCCT+CGG - chr1_2:56871741-56871760 None:intergenic 45.0%
!!! CCGAGGGAATCTTGTTTTTC+GGG + chr1_2:56871738-56871757 Msa0079130:CDS 45.0%
TACAAGTGAGGGTGGTGATA+AGG + chr1_2:56871768-56871787 Msa0079130:CDS 45.0%
CGAAACAACAGATTGGTAGG+AGG + chr1_2:56871899-56871918 Msa0079130:CDS 45.0%
GCTTGAGCTTCAATATGTGC+CGG + chr1_2:56871950-56871969 Msa0079130:CDS 45.0%
TCTCATATGAGGTGCATGTG+AGG + chr1_2:56872296-56872315 Msa0079130:intron 45.0%
CTCATATGAGGTGCATGTGA+GGG + chr1_2:56872297-56872316 Msa0079130:intron 45.0%
GCCTGCAACAGATCAGTTAT+TGG - chr1_2:56872328-56872347 None:intergenic 45.0%
TCCTTGACCTTCTAGTCAGA+TGG + chr1_2:56872391-56872410 Msa0079130:intron 45.0%
!! GAAGCTATTTTCCCCCATGT+TGG + chr1_2:56872621-56872640 Msa0079130:intron 45.0%
! CTATTTTCCCCCATGTTGGA+AGG + chr1_2:56872625-56872644 Msa0079130:intron 45.0%
AAAGGATCCTTCCAACATGG+GGG - chr1_2:56872635-56872654 None:intergenic 45.0%
CCAGGATATGCTCCTAAAAG+AGG - chr1_2:56872701-56872720 None:intergenic 45.0%
!! CCTCTTTTAGGAGCATATCC+TGG + chr1_2:56872698-56872717 Msa0079130:intron 45.0%
!!! ATCTGCTTTTTCGACTAGCC+AGG - chr1_2:56872719-56872738 None:intergenic 45.0%
!!! AGCTTGTGCTTTTTGGGGTT+AGG + chr1_2:56872918-56872937 Msa0079130:intron 45.0%
!!! TTGTGCTTTTTGGGGTTAGG+TGG + chr1_2:56872921-56872940 Msa0079130:intron 45.0%
!!! TGTGCTTTTTGGGGTTAGGT+GGG + chr1_2:56872922-56872941 Msa0079130:intron 45.0%
TGACAAAGAAGCTACTCGAG+AGG + chr1_2:56873420-56873439 Msa0079130:CDS 45.0%
CTGGAATGAATGGTGTGATC+CGG + chr1_2:56873669-56873688 Msa0079130:CDS 45.0%
!! GATGAAGGAGGATTGGTTTC+CGG - chr1_2:56873691-56873710 None:intergenic 45.0%
GCTATCTGATGAAGGAGGAT+TGG - chr1_2:56873698-56873717 None:intergenic 45.0%
GTTCATCCGCTATCTGATGA+AGG - chr1_2:56873706-56873725 None:intergenic 45.0%
! GTTTTTCACCTGCACGAAGT+AGG - chr1_2:56873739-56873758 None:intergenic 45.0%
GACTGTGACTGGGATAATGA+TGG - chr1_2:56874041-56874060 None:intergenic 45.0%
TCGTACTGTGCATCCTCCTT+GGG - chr1_2:56869888-56869907 None:intergenic 50.0%
GAGGTAAATCTGCAACTCCG+TGG + chr1_2:56869906-56869925 Msa0079130:five_prime_UTR 50.0%
AGAAAGGAAAGTGGGTCCCA+CGG - chr1_2:56869926-56869945 None:intergenic 50.0%
TGCTCTTGTGTCGTGTGCAA+CGG + chr1_2:56870583-56870602 Msa0079130:CDS 50.0%
GAATTTCAAAGGAGGGACGC+CGG + chr1_2:56871087-56871106 Msa0079130:CDS 50.0%
TTCTTCCAGGTTCGGACTCT+AGG + chr1_2:56871146-56871165 Msa0079130:CDS 50.0%
TCTTCCAGGTTCGGACTCTA+GGG + chr1_2:56871147-56871166 Msa0079130:CDS 50.0%
GATGGAGATAGTTGAGGTGG+TGG + chr1_2:56871186-56871205 Msa0079130:CDS 50.0%
GTCCATGGCTCATCACTGTT+TGG - chr1_2:56871354-56871373 None:intergenic 50.0%
GAGGCCAATGCATTCAGTTG+TGG + chr1_2:56871378-56871397 Msa0079130:CDS 50.0%
GGCCAATGCATTCAGTTGTG+GGG + chr1_2:56871380-56871399 Msa0079130:CDS 50.0%
TGAGCTTCAATATGTGCCGG+AGG + chr1_2:56871953-56871972 Msa0079130:CDS 50.0%
CTTCAATATGTGCCGGAGGT+TGG + chr1_2:56871957-56871976 Msa0079130:CDS 50.0%
GCCATCTGACTAGAAGGTCA+AGG - chr1_2:56872395-56872414 None:intergenic 50.0%
GTGGTTGCCATCTGACTAGA+AGG - chr1_2:56872401-56872420 None:intergenic 50.0%
AAGAGTCTCGACACAACGGT+TGG - chr1_2:56872425-56872444 None:intergenic 50.0%
ATTCCCTTGCCTATTGGTCC+AGG + chr1_2:56873110-56873129 Msa0079130:intron 50.0%
ACTCCTGGACCAATAGGCAA+GGG - chr1_2:56873116-56873135 None:intergenic 50.0%
TATTTCGTACAGGCCACTCC+TGG - chr1_2:56873131-56873150 None:intergenic 50.0%
AGGAGTGGCCTGTACGAAAT+AGG + chr1_2:56873130-56873149 Msa0079130:intron 50.0%
ACACAGGGCCTATTTCGTAC+AGG - chr1_2:56873141-56873160 None:intergenic 50.0%
TGCACCAAACCCTGAGAGTT+TGG - chr1_2:56873263-56873282 None:intergenic 50.0%
!! AACTCTCAGGGTTTGGTGCA+AGG + chr1_2:56873263-56873282 Msa0079130:CDS 50.0%
AAAGAAGCTACTCGAGAGGC+TGG + chr1_2:56873424-56873443 Msa0079130:CDS 50.0%
AAGAAGCTACTCGAGAGGCT+GGG + chr1_2:56873425-56873444 Msa0079130:CDS 50.0%
TTCATCAGGGTTTGAGTGCC+TGG + chr1_2:56873466-56873485 Msa0079130:CDS 50.0%
TCATCAGGGTTTGAGTGCCT+GGG + chr1_2:56873467-56873486 Msa0079130:CDS 50.0%
!!! ATGGTTTTGAAGTGGCGGCA+AGG + chr1_2:56873558-56873577 Msa0079130:CDS 50.0%
AAGGATAGATGCATGCTGGC+TGG + chr1_2:56873650-56873669 Msa0079130:CDS 50.0%
! TGCATGCTGGCTGGAATGAA+TGG + chr1_2:56873659-56873678 Msa0079130:CDS 50.0%
CATCCGCTATCTGATGAAGG+AGG - chr1_2:56873703-56873722 None:intergenic 50.0%
TTGTGCTGTGGCCATGATTG+TGG + chr1_2:56873939-56873958 Msa0079130:three_prime_UTR 50.0%
TTTGACAAGGTCGAGGCCCA+AGG + chr1_2:56869869-56869888 Msa0079130:five_prime_UTR 55.0%
CTCGTACTGTGCATCCTCCT+TGG - chr1_2:56869889-56869908 None:intergenic 55.0%
CAAGGAGGATGCACAGTACG+AGG + chr1_2:56869887-56869906 Msa0079130:five_prime_UTR 55.0%
CACACGACACAAGAGCAGTG+AGG - chr1_2:56870580-56870599 None:intergenic 55.0%
AGAAGGAGAGGGATCAACGG+CGG - chr1_2:56870620-56870639 None:intergenic 55.0%
CTAGGAGTTGCGAGTAGTGG+CGG + chr1_2:56871004-56871023 Msa0079130:CDS 55.0%
CAAACCCTAGAGTCCGAACC+TGG - chr1_2:56871154-56871173 None:intergenic 55.0%
!! CAGGTTCGGACTCTAGGGTT+TGG + chr1_2:56871152-56871171 Msa0079130:CDS 55.0%
! AGTTGAGGTGGTGGCTGATC+AGG + chr1_2:56871195-56871214 Msa0079130:CDS 55.0%
GAGAACCGACGCGTGAGAAA+GGG - chr1_2:56871230-56871249 None:intergenic 55.0%
GAATGACTTCCTAGCCTGGC+TGG - chr1_2:56871332-56871351 None:intergenic 55.0%
! CAGTGATGAGCCATGGACTG+AGG + chr1_2:56871356-56871375 Msa0079130:CDS 55.0%
! TGATGAGCCATGGACTGAGG+AGG + chr1_2:56871359-56871378 Msa0079130:CDS 55.0%
TTGTTGAACACGCGTGACCG+AGG + chr1_2:56871721-56871740 Msa0079130:CDS 55.0%
TGTTGAACACGCGTGACCGA+GGG + chr1_2:56871722-56871741 Msa0079130:CDS 55.0%
!! TATGTGCCGGAGGTTGGTAC+AGG + chr1_2:56871963-56871982 Msa0079130:CDS 55.0%
CACCTACCTGTACCAACCTC+CGG - chr1_2:56871972-56871991 None:intergenic 55.0%
TCTCGACACAACGGTTGGAG+TGG - chr1_2:56872420-56872439 None:intergenic 55.0%
CACTCCTGGACCAATAGGCA+AGG - chr1_2:56873117-56873136 None:intergenic 55.0%
CTTGCCTATTGGTCCAGGAG+TGG + chr1_2:56873115-56873134 Msa0079130:intron 55.0%
! GAGTGCCTGGGTGCTATAAG+TGG + chr1_2:56873479-56873498 Msa0079130:CDS 55.0%
CAGAGCCACTTATAGCACCC+AGG - chr1_2:56873487-56873506 None:intergenic 55.0%
! CTGGGTGCTATAAGTGGCTC+TGG + chr1_2:56873485-56873504 Msa0079130:CDS 55.0%
!! GGTGCTATAAGTGGCTCTGG+TGG + chr1_2:56873488-56873507 Msa0079130:CDS 55.0%
TTGAAGTGGCGGCAAGGATC+AGG + chr1_2:56873564-56873583 Msa0079130:CDS 55.0%
AGATCGGTCCTACTTCGTGC+AGG + chr1_2:56873728-56873747 Msa0079130:CDS 55.0%
GAGTTGCGAGTAGTGGCGGT+GGG + chr1_2:56871008-56871027 Msa0079130:CDS 60.0%
AGTTGCGAGTAGTGGCGGTG+GGG + chr1_2:56871009-56871028 Msa0079130:CDS 60.0%
!! GGTGGGGGTACTGAGGAGTT+GGG + chr1_2:56871025-56871044 Msa0079130:CDS 60.0%
! TGAGGAGTTGGGTGCTGTCG+CGG + chr1_2:56871036-56871055 Msa0079130:CDS 60.0%
GGTTTGGACCGCTCCAGAGA+TGG + chr1_2:56871168-56871187 Msa0079130:CDS 60.0%
! TGAGGTGGTGGCTGATCAGG+TGG + chr1_2:56871198-56871217 Msa0079130:CDS 60.0%
CGACGCGTGAGAAAGGGCTA+CGG - chr1_2:56871224-56871243 None:intergenic 60.0%
CGTAGCCCTTTCTCACGCGT+CGG + chr1_2:56871222-56871241 Msa0079130:CDS 60.0%
CGAGAACCGACGCGTGAGAA+AGG - chr1_2:56871231-56871250 None:intergenic 60.0%
! GCATTGGCCTCCTCAGTCCA+TGG - chr1_2:56871369-56871388 None:intergenic 60.0%
GCAAGCGGCTTCCCTCAACA+TGG - chr1_2:56871575-56871594 None:intergenic 60.0%
!! TGCCGGAGGTTGGTACAGGT+AGG + chr1_2:56871967-56871986 Msa0079130:intron 60.0%
CAGGCCACTCCTGGACCAAT+AGG - chr1_2:56873122-56873141 None:intergenic 60.0%
GACAAGGTCGAGGCCCAAGG+AGG + chr1_2:56869872-56869891 Msa0079130:five_prime_UTR 65.0%
GGAGTTGCGAGTAGTGGCGG+TGG + chr1_2:56871007-56871026 Msa0079130:CDS 65.0%
GTTGCGAGTAGTGGCGGTGG+GGG + chr1_2:56871010-56871029 Msa0079130:CDS 65.0%
!! TAGTGGCGGTGGGGGTACTG+AGG + chr1_2:56871018-56871037 Msa0079130:CDS 65.0%
!! CGGTGGGGGTACTGAGGAGT+TGG + chr1_2:56871024-56871043 Msa0079130:CDS 65.0%
CAAAGGAGGGACGCCGGAGT+TGG + chr1_2:56871093-56871112 Msa0079130:CDS 65.0%
! GAACGCGATGATGGCCAGCC+AGG + chr1_2:56871315-56871334 Msa0079130:CDS 65.0%
! CGATGATGGCCAGCCAGGCT+AGG + chr1_2:56871320-56871339 Msa0079130:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 56869824 56874138 56869824 ID=Msa0079130;Name=Msa0079130
chr1_2 mRNA 56869824 56874138 56869824 ID=Msa0079130-mRNA-1;Parent=Msa0079130;Name=Msa0079130-mRNA-1;_AED=0.02;_eAED=0.02;_QI=397|1|1|1|1|1|2|375|764
chr1_2 exon 56869824 56871984 56869824 ID=Msa0079130-mRNA-1:exon:17862;Parent=Msa0079130-mRNA-1
chr1_2 exon 56873233 56874138 56873233 ID=Msa0079130-mRNA-1:exon:17863;Parent=Msa0079130-mRNA-1
chr1_2 five_prime_UTR 56869824 56870220 56869824 ID=Msa0079130-mRNA-1:five_prime_utr;Parent=Msa0079130-mRNA-1
chr1_2 CDS 56870221 56871984 56870221 ID=Msa0079130-mRNA-1:cds;Parent=Msa0079130-mRNA-1
chr1_2 CDS 56873233 56873763 56873233 ID=Msa0079130-mRNA-1:cds;Parent=Msa0079130-mRNA-1
chr1_2 three_prime_UTR 56873764 56874138 56873764 ID=Msa0079130-mRNA-1:three_prime_utr;Parent=Msa0079130-mRNA-1
Gene Sequence

>Msa0079130

ATGAAAACTAAAACTCTTATTCTGTTGTTATTGCTTTTTAATCTTACTCTTTATGCTTCTGCTACTGATTCTGATGAATATGACCACTGTAACTGTGATGATGAGGAAGCACTTTTCAGCATACACACAATCCTTGTTGGTCAAAAAGTCAGTGATTTTTTCATTGCAATTGCATATTTTTCAATACCAATTGAGCTTCTTTACTTTGTTAGTCGTTCAAATGTTCCTTTCAAATTGTTGTTTCTTCAATTCATAGCCTTCATAGTTCTATGTGGTATGACTCATTTACTCAATGCTTATTCTTATCATAGTCATCCTTCTTTTCAACTCTTGCTTTCCCTTACTGTTGCTAAATTCCTCACTGCTCTTGTGTCGTGTGCAACGGCATTGACACTTCCGCCGTTGATCCCTCTCCTTCTTAGAATTAAGGTGAGGGAGATTTTCTTGAGGCAGAATGTGATGGAATTGGGGCAAGAAGTTGGGATTATGAAGAAACAAAAGGAAGCTAGTTGGCATGTTAGGATGCTTACTAGGGAAATTAGGAAGTCTCTTGATAAACATACAATTTTGTATACTACTCTTGTTGAGCTTTCTAAGGCTTTGGATTTGCATAATTGTGCTGTTTGGATGCCGAATGATGATAGGAGAGAGATGTATTTGACTCATGAATTGAAATCGGATTCGGGTAAGAGTTTTCATCATAATTCTATTCCTGTGATTGACCCTGATGTGTTGGAGATAAGGAAAACTAAAGGGGTTAGGATTTTGAGGCCTGAATCTAAACTAGGAGTTGCGAGTAGTGGCGGTGGGGGTACTGAGGAGTTGGGTGCTGTCGCGGCTATTCGTATGCCGATGCTTCATGTTTCGAATTTCAAAGGAGGGACGCCGGAGTTGGTTGATACATGTTATGCTATACTAGTTTTGGTTCTTCCAGGTTCGGACTCTAGGGTTTGGACCGCTCCAGAGATGGAGATAGTTGAGGTGGTGGCTGATCAGGTGGCCGTAGCCCTTTCTCACGCGTCGGTTCTCGAAGAGTCTTATTTAATGAGAGAGAAACTCGAAGAGCAAAACCGAGCATTGCAACAGTCTCAAAAGAACGCGATGATGGCCAGCCAGGCTAGGAAGTCATTCCAAACAGTGATGAGCCATGGACTGAGGAGGCCAATGCATTCAGTTGTGGGGATGCTTTCATTGTTTCAAGAGGGTAATATGAGGACTGAACAAAAGATTATTGGTGACACAATGTTGAAAGTCGGCAATGTGCTCTCGAGTTTAGTAAACGATGTAATGGATATCTCTGAAAATAAAAAGGGTGGCCTTCAGTTAGAGATGAAACCTTTCCTTCTACATTCCATGTTGAGGGAAGCCGCTTGCATTGCTAAGTGCTTGTGTGTGTATCAAGGGTTTGGTTTTCAAATTGATGTCGAAAAGTCTTTGCCTGAAAAAGTTTTAGGCGATGAAGCAAGGACTTTTCAAGTAATTATGCATATTATTGGCTATTTGTTGAACACGCGTGACCGAGGGAATCTTGTTTTTCGGGTTTTTGTTACAAGTGAGGGTGGTGATAAGGATGACAAAAAAATTGGTGTATGGAGATCGAGCAGCCCAGTTGAGTATGTAGACATAAAATTTGATTTTCAGATTACTGGTAGTTCTCAGTCAGATGAACCGATTTCAACGAAACAACAGATTGGTAGGAGGCTGAATCACAACAGTGAATCTAAGGAGGGCTTGAGCTTCAATATGTGCCGGAGGTTGGTACAGATAATGCAAGGTAATATATGGATATTACCAAACTCTCAGGGTTTGGTGCAAGGCGTGTCACTTCTTCTAAAGTTTCAGATAGGACCATCGCTTGAAAGATACATGTTTGCACCTAAAGATTATTCAAATTCACAGTTTGGAGGCCTCAAGATTTTGCTAGCAGATGATGATAGTTTAAATAGGATCGTGACAAAGAAGCTACTCGAGAGGCTGGGCTGTCTAGTAACAGCAGTTTCATCAGGGTTTGAGTGCCTGGGTGCTATAAGTGGCTCTGGTGGTAACTCATTCAAAATTATCATGTTAGACATTCACATGCCTGAAATGGATGGTTTTGAAGTGGCGGCAAGGATCAGGAAATTCAATGGCCCTAATTGGCCTTTGATCATAGCTCTTATAGCTAATGCAGAAGAGCAAGTTAAGGATAGATGCATGCTGGCTGGAATGAATGGTGTGATCCGGAAACCAATCCTCCTTCATCAGATAGCGGATGAACTTAGATCGGTCCTACTTCGTGCAGGTGAAAAACTGTGA

Protein sequence

>Msa0079130

MKTKTLILLLLLFNLTLYASATDSDEYDHCNCDDEEALFSIHTILVGQKVSDFFIAIAYFSIPIELLYFVSRSNVPFKLLFLQFIAFIVLCGMTHLLNAYSYHSHPSFQLLLSLTVAKFLTALVSCATALTLPPLIPLLLRIKVREIFLRQNVMELGQEVGIMKKQKEASWHVRMLTREIRKSLDKHTILYTTLVELSKALDLHNCAVWMPNDDRREMYLTHELKSDSGKSFHHNSIPVIDPDVLEIRKTKGVRILRPESKLGVASSGGGGTEELGAVAAIRMPMLHVSNFKGGTPELVDTCYAILVLVLPGSDSRVWTAPEMEIVEVVADQVAVALSHASVLEESYLMREKLEEQNRALQQSQKNAMMASQARKSFQTVMSHGLRRPMHSVVGMLSLFQEGNMRTEQKIIGDTMLKVGNVLSSLVNDVMDISENKKGGLQLEMKPFLLHSMLREAACIAKCLCVYQGFGFQIDVEKSLPEKVLGDEARTFQVIMHIIGYLLNTRDRGNLVFRVFVTSEGGDKDDKKIGVWRSSSPVEYVDIKFDFQITGSSQSDEPISTKQQIGRRLNHNSESKEGLSFNMCRRLVQIMQGNIWILPNSQGLVQGVSLLLKFQIGPSLERYMFAPKDYSNSQFGGLKILLADDDSLNRIVTKKLLERLGCLVTAVSSGFECLGAISGSGGNSFKIIMLDIHMPEMDGFEVAARIRKFNGPNWPLIIALIANAEEQVKDRCMLAGMNGVIRKPILLHQIADELRSVLLRAGEKL*