AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1400930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1400930 MtrunA17_Chr4g0057561 97.791 679 13 1 1 677 15 693 0.0 1360
Msa1400930 MtrunA17_Chr8g0344461 40.510 627 322 15 82 676 9 616 2.48e-140 424
Msa1400930 MtrunA17_Chr7g0219041 44.404 545 270 11 146 674 150 677 1.94e-139 423
Msa1400930 MtrunA17_Chr5g0431731 33.886 664 391 11 17 665 4 634 5.38e-121 374
Msa1400930 MtrunA17_Chr3g0086881 38.556 568 314 12 116 675 79 619 1.25e-119 370
Msa1400930 MtrunA17_Chr1g0197101 32.738 672 392 12 17 664 6 641 4.24e-119 370
Msa1400930 MtrunA17_Chr1g0177671 34.419 645 372 12 32 664 20 625 1.39e-116 363
Msa1400930 MtrunA17_Chr3g0106431 34.545 660 378 14 17 665 4 620 2.61e-115 359
Msa1400930 MtrunA17_Chr6g0462011 36.000 550 315 10 139 676 213 737 5.35e-106 338
Msa1400930 MtrunA17_Chr7g0224041 36.531 542 306 13 144 671 137 654 6.17e-105 333
Msa1400930 MtrunA17_Chr5g0431741 38.914 442 262 4 229 665 255 693 6.71e-98 316
Msa1400930 MtrunA17_Chr1g0214001 33.110 598 331 12 111 665 98 669 3.13e-96 311
Msa1400930 MtrunA17_Chr2g0327741 31.743 608 353 14 71 668 30 585 3.72e-87 284
Msa1400930 MtrunA17_Chr4g0030621 32.855 557 326 13 116 658 76 598 2.15e-82 273
Msa1400930 MtrunA17_Chr1g0182041 29.883 599 364 16 81 662 41 600 2.19e-76 256
Msa1400930 MtrunA17_Chr1g0182031 30.033 606 355 16 81 662 39 599 1.25e-69 238
Msa1400930 MtrunA17_Chr5g0432091 30.973 452 296 7 225 663 254 702 3.48e-66 231
Msa1400930 MtrunA17_Chr5g0431811 31.176 340 207 4 220 554 275 592 4.95e-51 191
Msa1400930 MtrunA17_Chr5g0431811 35.429 175 112 1 491 665 896 1069 1.77e-20 96.7
Msa1400930 MtrunA17_Chr5g0432041 29.724 434 282 10 237 662 255 673 2.15e-47 177
Msa1400930 MtrunA17_Chr5g0431761 34.043 282 180 3 229 507 256 534 5.76e-46 172
Msa1400930 MtrunA17_Chr1g0147911 28.256 453 281 14 237 667 226 656 2.04e-37 148
Msa1400930 MtrunA17_Chr3g0104851 28.009 432 277 11 242 662 258 666 3.65e-37 147
Msa1400930 MtrunA17_Chr1g0152401 26.485 404 271 11 259 641 273 671 8.49e-33 134
Msa1400930 MtrunA17_Chr5g0431871 33.152 184 117 3 232 410 1 183 1.03e-30 119
Msa1400930 MtrunA17_Chr5g0431971 27.381 336 218 7 335 665 12 326 1.81e-28 117
Msa1400930 MtrunA17_Chr4g0002391 24.945 453 304 14 233 671 216 646 1.57e-25 112
Msa1400930 MtrunA17_Chr2g0300651 24.719 445 307 11 237 671 218 644 4.04e-25 110
Msa1400930 MtrunA17_Chr5g0431881 34.286 175 114 1 491 665 51 224 4.87e-21 92.4
Msa1400930 MtrunA17_Chr5g0431991 28.415 183 117 4 229 408 247 418 1.62e-17 85.5
Msa1400930 MtrunA17_Chr5g0444661 26.316 266 180 5 336 597 170 423 6.38e-16 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1400930 AT5G50380.1 57.980 683 238 11 20 676 24 683 0.0 735
Msa1400930 AT1G72470.1 40.510 627 324 12 82 676 23 632 1.38e-147 443
Msa1400930 AT3G14090.1 39.647 623 353 11 72 675 5 623 4.93e-140 423
Msa1400930 AT1G54090.1 45.275 455 233 8 232 674 170 620 7.90e-131 400
Msa1400930 AT3G29400.1 38.487 595 300 10 115 675 96 658 6.96e-120 372
Msa1400930 AT5G58430.1 34.125 674 359 15 18 665 5 619 1.91e-116 362
Msa1400930 AT5G52340.1 33.591 646 376 14 31 664 19 623 1.57e-115 360
Msa1400930 AT5G03540.1 33.487 651 375 13 32 664 20 630 5.15e-113 354
Msa1400930 AT5G03540.3 32.887 672 377 16 32 664 20 656 1.90e-108 343
Msa1400930 AT5G13150.1 36.891 534 308 10 147 669 134 649 1.27e-107 340
Msa1400930 AT5G03540.2 35.714 546 300 10 137 664 3 515 6.02e-107 334
Msa1400930 AT5G61010.1 32.180 665 392 14 16 667 11 629 2.16e-99 318
Msa1400930 AT5G61010.2 32.180 665 392 14 16 667 11 629 2.16e-99 318
Msa1400930 AT1G07000.1 31.071 663 374 16 17 665 4 597 1.84e-92 299
Msa1400930 AT5G13990.1 35.150 532 311 11 146 667 177 684 4.41e-90 295
Msa1400930 AT2G28640.1 32.892 529 302 10 147 665 94 579 1.96e-87 286
Msa1400930 AT5G52350.1 33.830 470 282 8 203 664 129 577 1.94e-84 277
Msa1400930 AT5G59730.2 35.660 530 306 12 150 665 91 599 3.90e-81 270
Msa1400930 AT5G59730.1 35.660 530 306 12 150 665 91 599 5.40e-81 270
Msa1400930 AT1G07725.1 31.132 530 319 9 147 664 96 591 4.84e-79 264
Msa1400930 AT2G39380.1 30.490 551 340 12 129 666 92 612 1.59e-73 249
Msa1400930 AT3G09520.1 29.575 541 319 14 147 662 101 604 3.26e-70 241
Msa1400930 AT3G09530.1 31.481 540 315 14 147 664 96 602 4.80e-69 238
Msa1400930 AT3G55150.1 29.268 533 340 10 147 666 104 612 4.11e-64 224
Msa1400930 AT2G28650.1 33.882 425 254 8 243 662 152 554 7.94e-63 219
Msa1400930 AT4G31540.1 26.477 457 307 14 225 666 216 658 2.01e-35 143
Msa1400930 AT1G51640.1 26.126 444 289 14 243 663 199 626 1.45e-26 115

Find 179 sgRNAs with CRISPR-Local

Find 426 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTGAGTGTTTGGCAATTC+TGG 0.129191 tig0022494:+41127 Msa1400930:CDS
GGAGAAGCTGTTTAGGATTT+TGG 0.131734 tig0022494:+41400 Msa1400930:CDS
CTCAGATCTTATAGAGGTTT+TGG 0.163380 tig0022494:+41898 Msa1400930:CDS
CATGTCTTCACGATCTTCTT+TGG 0.189109 tig0022494:-40421 None:intergenic
TTCAAATTCAAAATTGATTC+AGG 0.215721 tig0022494:-41023 None:intergenic
ACCTGCATACCGCTCGTTTA+TGG 0.216171 tig0022494:+42186 Msa1400930:CDS
CGATGCTATGGATTCGCTTT+TGG 0.220306 tig0022494:+41661 Msa1400930:CDS
TATAATCCGCAAGCAGTTTC+AGG 0.258964 tig0022494:-41637 None:intergenic
CCCAGTTATAACCGGCCTTC+TGG 0.267806 tig0022494:-41579 None:intergenic
GTTATGATGTTGTTGAATTT+TGG 0.284340 tig0022494:+41347 Msa1400930:CDS
GGTGGGTTTGATGATAATTC+TGG 0.285342 tig0022494:+40909 Msa1400930:CDS
CACGGCGGCGGCGGAGCCAC+CGG 0.302418 tig0022494:+40336 Msa1400930:CDS
GAGAGATGCTTTGCCTGAAT+TGG 0.303022 tig0022494:+41439 Msa1400930:CDS
TCCAGAAGGCCGGTTATAAC+TGG 0.303990 tig0022494:+41578 Msa1400930:CDS
TGATGATTTATTTGTTGATT+TGG 0.313785 tig0022494:+40995 Msa1400930:CDS
GGCGGCGGAGCCACCGGCGC+TGG 0.314460 tig0022494:+40342 Msa1400930:CDS
GATGATAATTCTGGGAGTTT+TGG 0.322543 tig0022494:+40918 Msa1400930:CDS
TTTGCCTGAATTGGAGGATA+TGG 0.324739 tig0022494:+41448 Msa1400930:CDS
GTCGTCGGATTTGGAAGATT+TGG 0.333151 tig0022494:-40511 None:intergenic
GTCGACGTCGTCGTCGGATT+TGG 0.334534 tig0022494:-40520 None:intergenic
AAGCTGTTAAGGTCGTTGTT+AGG 0.336199 tig0022494:+41228 Msa1400930:CDS
ATGTCTTCACGATCTTCTTT+GGG 0.340161 tig0022494:-40420 None:intergenic
TATCTATTAGATTTATTTGA+AGG 0.343121 tig0022494:+42283 Msa1400930:CDS
GAGGGGACAAAGCTTCTAAC+TGG 0.344667 tig0022494:-41739 None:intergenic
CCTTGCTCCAACAGGCTCTA+AGG 0.347147 tig0022494:-41976 None:intergenic
GAAGTTTGAGTGGAAGAGTT+TGG 0.356231 tig0022494:+41181 Msa1400930:CDS
TTGGCTTGTTTGAGGGATGA+AGG 0.360266 tig0022494:+42001 Msa1400930:CDS
AGCCTGTTGGAGCAAGGCCT+TGG 0.361426 tig0022494:+41982 Msa1400930:CDS
GTTGAGTGTTTGGCAATTCT+GGG 0.364660 tig0022494:+41128 Msa1400930:CDS
GGTCGCCGGAGAAGCTGTTT+AGG 0.371076 tig0022494:+41393 Msa1400930:CDS
TTTGGTGATGTGGGTGATCC+TGG 0.375875 tig0022494:+40936 Msa1400930:CDS
TGACGCGTTGGTTGAGTGTT+TGG 0.383090 tig0022494:+41118 Msa1400930:CDS
ATATGAGAGGGAGTGTTTGC+AGG 0.388456 tig0022494:+41076 Msa1400930:CDS
GCAAGGCCTTGGCTTGTTTG+AGG 0.389482 tig0022494:+41993 Msa1400930:CDS
AAGGGTGTGCTTAGAGGACT+TGG 0.391145 tig0022494:+41500 Msa1400930:CDS
CAAGGCCTTGGCTTGTTTGA+GGG 0.393731 tig0022494:+41994 Msa1400930:CDS
ACGATCCAATATAATCTTAC+CGG 0.397560 tig0022494:-40739 None:intergenic
TGGATGAGAGGATGAAGAAT+TGG 0.402092 tig0022494:+41201 Msa1400930:CDS
AGCCAAGGCCTTGCTCCAAC+AGG 0.402360 tig0022494:-41984 None:intergenic
CTGAGTTTGAGAGTTGTATT+CGG 0.403325 tig0022494:+41546 Msa1400930:CDS
GAGGCGAAGGGTGTGCTTAG+AGG 0.408805 tig0022494:+41494 Msa1400930:CDS
GCCGCCGTGGTTGGTGGTGG+TGG 0.410894 tig0022494:-40322 None:intergenic
TTGGTGGTGGTGGCGGCCAT+AGG 0.411564 tig0022494:-40312 None:intergenic
TTAGCCGGTGTAGTACTAAT+AGG 0.412771 tig0022494:+40850 Msa1400930:CDS
TGTTTGAGGGATGAAGGGGT+TGG 0.413469 tig0022494:+42007 Msa1400930:CDS
GGTTCGTAAGCGCCGCGGTC+AGG 0.413882 tig0022494:+41931 Msa1400930:CDS
TGGAATCGTCGCCGTTGATA+AGG 0.413973 tig0022494:-40491 None:intergenic
GTAACCATATCCTCCAATTC+AGG 0.417224 tig0022494:-41452 None:intergenic
TGGGTGATCCTGGTTCTCAT+AGG 0.419887 tig0022494:+40946 Msa1400930:CDS
GAATTGGGTGCAAGCTGTTA+AGG 0.422274 tig0022494:+41217 Msa1400930:CDS
TGCATCAAGGATGGCTTTGA+AGG 0.425408 tig0022494:+42045 Msa1400930:CDS
GGCGGAGCCACCGGCGCTGG+CGG 0.429239 tig0022494:+40345 Msa1400930:CDS
CGGTGGCTCCGCCGCCGCCG+TGG 0.432103 tig0022494:-40335 None:intergenic
AGCTGTTAAGGTCGTTGTTA+GGG 0.435827 tig0022494:+41229 Msa1400930:CDS
TTCGCATCTCTTCACGAAGC+TGG 0.437799 tig0022494:-42141 None:intergenic
GTTGATAAGGTCGGTGATAC+CGG 0.445597 tig0022494:-40478 None:intergenic
GGCTCCGCCGCCGCCGTGGT+TGG 0.450387 tig0022494:-40331 None:intergenic
ATATTATTGATCGGATGGTT+AGG 0.455899 tig0022494:+41048 Msa1400930:CDS
ACCTTCGACAACCGTCTCTC+CGG 0.457479 tig0022494:+40459 Msa1400930:CDS
TTCAGTTCGCAGGACGGTGC+CGG 0.459367 tig0022494:+40888 Msa1400930:CDS
CTTTCTCCGCAGCTTCGAAT+CGG 0.459685 tig0022494:-40554 None:intergenic
ACAGCGTTGAAATAGACTTC+AGG 0.460769 tig0022494:-40651 None:intergenic
AAGCAGTTGCCATTTGTAAG+AGG 0.461420 tig0022494:+41372 Msa1400930:CDS
TGGCTTGTTTGAGGGATGAA+GGG 0.462221 tig0022494:+42002 Msa1400930:CDS
CGAGCCTCGACATGGCAACT+TGG 0.462336 tig0022494:-40776 None:intergenic
ACCACCACCAACCACGGCGG+CGG 0.465623 tig0022494:+40324 Msa1400930:CDS
AAATAGACTTCAGGATCATT+CGG 0.468898 tig0022494:-40642 None:intergenic
GTGGGTTTGATGATAATTCT+GGG 0.470117 tig0022494:+40910 Msa1400930:CDS
CAGCTGGAGGGAAGACATGC+AGG 0.472085 tig0022494:+42223 Msa1400930:CDS
TTGAGGGATGAAGGGGTTGG+AGG 0.475164 tig0022494:+42010 Msa1400930:CDS
ACCACCAACCACGGCGGCGG+CGG 0.479449 tig0022494:+40327 Msa1400930:CDS
TTCGATGTCTTTCAGTTCGC+AGG 0.481567 tig0022494:+40878 Msa1400930:CDS
TCTTCACGAAGCTGGTCATC+GGG 0.481866 tig0022494:-42133 None:intergenic
CTGCTGTATTACATCACATA+AGG 0.483360 tig0022494:+42311 Msa1400930:CDS
AACAATATCTGTCGTCCTAG+AGG 0.484161 tig0022494:-41758 None:intergenic
GAAAGATATTATTGATCGGA+TGG 0.484306 tig0022494:+41043 Msa1400930:CDS
AGATAAGTCTCTAGATCCTC+TGG 0.484363 tig0022494:-42265 None:intergenic
CATGAACGTGGTGTTAGTCT+TGG 0.484870 tig0022494:+40972 Msa1400930:CDS
CTCTTCACGAAGCTGGTCAT+CGG 0.485803 tig0022494:-42134 None:intergenic
AGTGGAAGAGTTTGGATGAG+AGG 0.486737 tig0022494:+41189 Msa1400930:CDS
AAGAGGTGCAGAAGTTTGAG+TGG 0.490479 tig0022494:+41171 Msa1400930:CDS
TGAACATCCCCAGTTATAAC+CGG 0.491360 tig0022494:-41587 None:intergenic
GGATGAGAGGATGAAGAATT+GGG 0.498960 tig0022494:+41202 Msa1400930:CDS
CTCCGGCGACCTCTTACAAA+TGG 0.499086 tig0022494:-41381 None:intergenic
ATTGATCGGATGGTTAGGTC+TGG 0.500159 tig0022494:+41053 Msa1400930:CDS
CCAGAAGGCCGGTTATAACT+GGG 0.500675 tig0022494:+41579 Msa1400930:CDS
AAAATCCTAAACAGCTTCTC+CGG 0.501012 tig0022494:-41398 None:intergenic
CGAAGACCATGCATTGCAGC+AGG 0.503483 tig0022494:+41829 Msa1400930:CDS
GGACTTGGGGAGGCTGTGAA+AGG 0.503815 tig0022494:+41515 Msa1400930:CDS
TCGTTTATGGGGAGGTTTAG+CGG 0.504852 tig0022494:+42199 Msa1400930:CDS
TGAGAAATTGAGTATTGAAG+AGG 0.506438 tig0022494:+41154 Msa1400930:CDS
GCCGTGGTTGGTGGTGGTGG+CGG 0.509112 tig0022494:-40319 None:intergenic
GAGGTTTAGCGGTCAGCTGG+AGG 0.513245 tig0022494:+42210 Msa1400930:CDS
TGCGGATTATAGCGATGCTA+TGG 0.514545 tig0022494:+41649 Msa1400930:CDS
ATCGTCTCCGCCAGCGCCGG+TGG 0.515320 tig0022494:-40352 None:intergenic
TATACAGGGTTCAGACAGCT+TGG 0.522120 tig0022494:+42104 Msa1400930:CDS
CAGGTACGGCAGTATGCTAC+GGG 0.525123 tig0022494:+41950 Msa1400930:CDS
TGTTTCAATGAAACAGCTAA+AGG 0.529199 tig0022494:+41320 Msa1400930:CDS
GGCTTGTTTGAGGGATGAAG+GGG 0.529766 tig0022494:+42003 Msa1400930:CDS
TCCGCCGCCGCCGTGGTTGG+TGG 0.530179 tig0022494:-40328 None:intergenic
TGAGGGATGAAGGGGTTGGA+GGG 0.530800 tig0022494:+42011 Msa1400930:CDS
TCGCCGCCGATTAATTCCGC+TGG 0.530990 tig0022494:+40711 Msa1400930:CDS
CAGGGTTCAGACAGCTTGGA+AGG 0.532910 tig0022494:+42108 Msa1400930:CDS
GAAGGACTCAGATCTTATAG+AGG 0.537090 tig0022494:+41892 Msa1400930:CDS
AGATGCTTTGCCTGAATTGG+AGG 0.537441 tig0022494:+41442 Msa1400930:CDS
GAATGAGACTTCCAGAAGGC+CGG 0.539455 tig0022494:+41568 Msa1400930:CDS
CTTATGTGATGTAATACAGC+AGG 0.540840 tig0022494:-42310 None:intergenic
GACTTGGGGAGGCTGTGAAA+GGG 0.541087 tig0022494:+41516 Msa1400930:CDS
CCGCAGCTTCGAATCGGTCA+AGG 0.541154 tig0022494:-40548 None:intergenic
TCAGGTACGGCAGTATGCTA+CGG 0.542639 tig0022494:+41949 Msa1400930:CDS
GCCGCCGCCGTGGTTGGTGG+TGG 0.544351 tig0022494:-40325 None:intergenic
CGGTGATCTGGAGGATGTGA+AGG 0.545653 tig0022494:+41292 Msa1400930:CDS
TCGATCGTCTCCGCCAGCGC+CGG 0.545758 tig0022494:-40355 None:intergenic
TTAGAAGCTTTGTCCCCTCT+AGG 0.547956 tig0022494:+41743 Msa1400930:CDS
TGAATTGGAGGATATGGTTA+CGG 0.548359 tig0022494:+41454 Msa1400930:CDS
GTCTTCGTCGACGTCGTCGT+CGG 0.550950 tig0022494:-40526 None:intergenic
CGGGGTACCTTAGAGCCTGT+TGG 0.554700 tig0022494:+41969 Msa1400930:CDS
TTCATCCCTCAAACAAGCCA+AGG 0.558253 tig0022494:-41999 None:intergenic
CTGCATACCGCTCGTTTATG+GGG 0.560603 tig0022494:+42188 Msa1400930:CDS
TAGCGTTCGTCGTGACGCGT+TGG 0.560625 tig0022494:+41106 Msa1400930:CDS
ATTTGAAAGATATTATTGAT+CGG 0.563345 tig0022494:+41039 Msa1400930:CDS
GCGAATAAATATATCAGAGA+AGG 0.564463 tig0022494:+42159 Msa1400930:CDS
GGAGAGACGGTTGTCGAAGG+TGG 0.566049 tig0022494:-40457 None:intergenic
TTCATCACATAACGAGGCAA+AGG 0.566666 tig0022494:-41611 None:intergenic
TGCCATTTGTAAGAGGTCGC+CGG 0.568876 tig0022494:+41379 Msa1400930:CDS
CTACACCGGCTAACAGCATC+CGG 0.569586 tig0022494:-40840 None:intergenic
AGGGTGTGCTTAGAGGACTT+GGG 0.570928 tig0022494:+41501 Msa1400930:CDS
AAAACACCTGCTGCAATGCA+TGG 0.571711 tig0022494:-41835 None:intergenic
GCCGCCACCACCACCAACCA+CGG 0.572840 tig0022494:+40318 Msa1400930:CDS
GATGAACAATCTGCATTACC+TGG 0.578458 tig0022494:+41859 Msa1400930:CDS
CATACCGCTCGTTTATGGGG+AGG 0.579620 tig0022494:+42191 Msa1400930:CDS
CTCATCCTCGAGCCTCGACA+TGG 0.579888 tig0022494:-40784 None:intergenic
ACAATATCTGTCGTCCTAGA+GGG 0.580122 tig0022494:-41757 None:intergenic
AGGTTTAGCGGTCAGCTGGA+GGG 0.584483 tig0022494:+42211 Msa1400930:CDS
CTCTAATAATGCATCAAGGA+TGG 0.585042 tig0022494:+42036 Msa1400930:CDS
AGTCCTTCACTTTACGCACC+AGG 0.585464 tig0022494:-41877 None:intergenic
TGATGAGATTATTCAGTGGA+TGG 0.587474 tig0022494:+40674 Msa1400930:CDS
AGTTGATTGACGAGAAGACT+CGG 0.589836 tig0022494:-40604 None:intergenic
CCTTAGAGCCTGTTGGAGCA+AGG 0.595856 tig0022494:+41976 Msa1400930:CDS
TTACCTGGTGCGTAAAGTGA+AGG 0.597081 tig0022494:+41874 Msa1400930:CDS
TGAACTTGAGCACAATCTTG+AGG 0.601252 tig0022494:+41790 Msa1400930:CDS
CGATCCAAGTTGCCATGTCG+AGG 0.603013 tig0022494:+40772 Msa1400930:CDS
TGTGCTTAGAGGACTTGGGG+AGG 0.604725 tig0022494:+41505 Msa1400930:CDS
GGTTAGGTCTGGATATGAGA+GGG 0.609758 tig0022494:+41064 Msa1400930:CDS
AGTTGCCATGTCGAGGCTCG+AGG 0.615415 tig0022494:+40779 Msa1400930:CDS
GTTTGTGATTACTGAGGCGA+AGG 0.619367 tig0022494:+41481 Msa1400930:CDS
ATGTCTTTCAGTTCGCAGGA+CGG 0.623036 tig0022494:+40882 Msa1400930:CDS
ACCGGAGAGACGGTTGTCGA+AGG 0.623770 tig0022494:-40460 None:intergenic
GCCGGTGTAGTACTAATAGG+AGG 0.627601 tig0022494:+40853 Msa1400930:CDS
GGTCGGTGATACCGGAGAGA+CGG 0.630028 tig0022494:-40470 None:intergenic
TCTCATAGGTTTCATGAACG+TGG 0.632602 tig0022494:+40960 Msa1400930:CDS
GGGTGTGCTTAGAGGACTTG+GGG 0.635936 tig0022494:+41502 Msa1400930:CDS
TCCTCCTATTAGTACTACAC+CGG 0.639220 tig0022494:-40854 None:intergenic
TCATGAAACCTATGAGAACC+AGG 0.642446 tig0022494:-40954 None:intergenic
AGAATTATCATCAAACCCAC+CGG 0.644146 tig0022494:-40907 None:intergenic
GCCACCACCACCAACCACGG+CGG 0.645487 tig0022494:+40321 Msa1400930:CDS
GATTTGTAATACTGTTCCGC+CGG 0.645631 tig0022494:+40821 Msa1400930:CDS
GGAGCTCTAATAATGCATCA+AGG 0.649173 tig0022494:+42032 Msa1400930:CDS
CCTTGACCGATTCGAAGCTG+CGG 0.650783 tig0022494:+40548 Msa1400930:CDS
TGGTTAGGTCTGGATATGAG+AGG 0.651249 tig0022494:+41063 Msa1400930:CDS
GAATTACCTGAAACTGCTTG+CGG 0.651276 tig0022494:+41631 Msa1400930:CDS
CAATATCTGTCGTCCTAGAG+GGG 0.655074 tig0022494:-41756 None:intergenic
ATCGTCGCCGTTGATAAGGT+CGG 0.656137 tig0022494:-40487 None:intergenic
AGGTAATTCATCACATAACG+AGG 0.663103 tig0022494:-41617 None:intergenic
AGGGGACAAAGCTTCTAACT+GGG 0.667012 tig0022494:-41738 None:intergenic
ATACATCAAGTATGTACCAG+AGG 0.668650 tig0022494:+42249 Msa1400930:CDS
GGATGAGTTTGTGATTACTG+AGG 0.669005 tig0022494:+41475 Msa1400930:CDS
CAGAAGGCCGGTTATAACTG+GGG 0.674324 tig0022494:+41580 Msa1400930:CDS
GGTATCACCGACCTTATCAA+CGG 0.676562 tig0022494:+40480 Msa1400930:CDS
TAGACTTCAGGATCATTCGG+AGG 0.689209 tig0022494:-40639 None:intergenic
TTTCCAGCGGAATTAATCGG+CGG 0.697053 tig0022494:-40714 None:intergenic
TTTGTGATTACTGAGGCGAA+GGG 0.701534 tig0022494:+41482 Msa1400930:CDS
CATACTGCCGTACCTGACCG+CGG 0.704323 tig0022494:-41943 None:intergenic
TTCGGAATGAGACTTCCAGA+AGG 0.705961 tig0022494:+41564 Msa1400930:CDS
CACCGGCTAACAGCATCCGG+CGG 0.709949 tig0022494:-40837 None:intergenic
AATTGGGTTCGTAAGCGCCG+CGG 0.718269 tig0022494:+41926 Msa1400930:CDS
TGATTGACGAGAAGACTCGG+TGG 0.724015 tig0022494:-40601 None:intergenic
CTGTTGATGAGATTATTCAG+TGG 0.751504 tig0022494:+40670 Msa1400930:CDS
TAAACCTCCCCATAAACGAG+CGG 0.756814 tig0022494:-42195 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTGAAAGATATTATTGAT+CGG + tig0022494:41039-41058 Msa1400930:CDS 15.0%
!!! TTATCACTTTAAAAATGATT+TGG + tig0022494:41703-41722 Msa1400930:CDS 15.0%
!!! TATCACTTTAAAAATGATTT+GGG + tig0022494:41704-41723 Msa1400930:CDS 15.0%
!! TATCTATTAGATTTATTTGA+AGG + tig0022494:42283-42302 Msa1400930:CDS 15.0%
!! ATTTGAAAGATATTATTGAT+CGG + tig0022494:41039-41058 Msa1400930:CDS 15.0%
!!! TTATCACTTTAAAAATGATT+TGG + tig0022494:41703-41722 Msa1400930:CDS 15.0%
!!! TATCACTTTAAAAATGATTT+GGG + tig0022494:41704-41723 Msa1400930:CDS 15.0%
!! TATCTATTAGATTTATTTGA+AGG + tig0022494:42283-42302 Msa1400930:CDS 15.0%
!!! TGATGATTTATTTGTTGATT+TGG + tig0022494:40995-41014 Msa1400930:CDS 20.0%
!!! TTCAAATTCAAAATTGATTC+AGG - tig0022494:41026-41045 None:intergenic 20.0%
!!! TGATGATTTATTTGTTGATT+TGG + tig0022494:40995-41014 Msa1400930:CDS 20.0%
!!! TTCAAATTCAAAATTGATTC+AGG - tig0022494:41026-41045 None:intergenic 20.0%
! AAAAACCGGTAAGATTATAT+TGG + tig0022494:40734-40753 Msa1400930:CDS 25.0%
!! GTTATGATGTTGTTGAATTT+TGG + tig0022494:41347-41366 Msa1400930:CDS 25.0%
!!! GTGTTTTGAAGATATATACA+GGG + tig0022494:42090-42109 Msa1400930:CDS 25.0%
! AAAAACCGGTAAGATTATAT+TGG + tig0022494:40734-40753 Msa1400930:CDS 25.0%
!! GTTATGATGTTGTTGAATTT+TGG + tig0022494:41347-41366 Msa1400930:CDS 25.0%
!!! GTGTTTTGAAGATATATACA+GGG + tig0022494:42090-42109 Msa1400930:CDS 25.0%
AAATAGACTTCAGGATCATT+CGG - tig0022494:40645-40664 None:intergenic 30.0%
ACGATCCAATATAATCTTAC+CGG - tig0022494:40742-40761 None:intergenic 30.0%
GAAAGATATTATTGATCGGA+TGG + tig0022494:41043-41062 Msa1400930:CDS 30.0%
ATATTATTGATCGGATGGTT+AGG + tig0022494:41048-41067 Msa1400930:CDS 30.0%
!! TGAGAAATTGAGTATTGAAG+AGG + tig0022494:41154-41173 Msa1400930:CDS 30.0%
TGTTTCAATGAAACAGCTAA+AGG + tig0022494:41320-41339 Msa1400930:CDS 30.0%
! TAGGATTTTGGATATGTATG+AGG + tig0022494:41412-41431 Msa1400930:CDS 30.0%
! CACTTTAAAAATGATTTGGG+TGG + tig0022494:41707-41726 Msa1400930:CDS 30.0%
! TCAGATCTTATAGAGGTTTT+GGG + tig0022494:41899-41918 Msa1400930:CDS 30.0%
!!! CGTGTTTTGAAGATATATAC+AGG + tig0022494:42089-42108 Msa1400930:CDS 30.0%
GCGAATAAATATATCAGAGA+AGG + tig0022494:42159-42178 Msa1400930:CDS 30.0%
AAATAGACTTCAGGATCATT+CGG - tig0022494:40645-40664 None:intergenic 30.0%
ACGATCCAATATAATCTTAC+CGG - tig0022494:40742-40761 None:intergenic 30.0%
GAAAGATATTATTGATCGGA+TGG + tig0022494:41043-41062 Msa1400930:CDS 30.0%
ATATTATTGATCGGATGGTT+AGG + tig0022494:41048-41067 Msa1400930:CDS 30.0%
!! TGAGAAATTGAGTATTGAAG+AGG + tig0022494:41154-41173 Msa1400930:CDS 30.0%
TGTTTCAATGAAACAGCTAA+AGG + tig0022494:41320-41339 Msa1400930:CDS 30.0%
! TAGGATTTTGGATATGTATG+AGG + tig0022494:41412-41431 Msa1400930:CDS 30.0%
! CACTTTAAAAATGATTTGGG+TGG + tig0022494:41707-41726 Msa1400930:CDS 30.0%
! TCAGATCTTATAGAGGTTTT+GGG + tig0022494:41899-41918 Msa1400930:CDS 30.0%
!!! CGTGTTTTGAAGATATATAC+AGG + tig0022494:42089-42108 Msa1400930:CDS 30.0%
GCGAATAAATATATCAGAGA+AGG + tig0022494:42159-42178 Msa1400930:CDS 30.0%
ATGTCTTCACGATCTTCTTT+GGG - tig0022494:40423-40442 None:intergenic 35.0%
! CTGTTGATGAGATTATTCAG+TGG + tig0022494:40670-40689 Msa1400930:CDS 35.0%
TGATGAGATTATTCAGTGGA+TGG + tig0022494:40674-40693 Msa1400930:CDS 35.0%
! GTTTTTCCAGCGGAATTAAT+CGG - tig0022494:40720-40739 None:intergenic 35.0%
ATTAATTCCGCTGGAAAAAC+CGG + tig0022494:40720-40739 Msa1400930:CDS 35.0%
AGAATTATCATCAAACCCAC+CGG - tig0022494:40910-40929 None:intergenic 35.0%
! GTGGGTTTGATGATAATTCT+GGG + tig0022494:40910-40929 Msa1400930:CDS 35.0%
!! GATGATAATTCTGGGAGTTT+TGG + tig0022494:40918-40937 Msa1400930:CDS 35.0%
!!! TTGTTAGGGTTTTGTTGAGT+GGG + tig0022494:41243-41262 Msa1400930:CDS 35.0%
! AGGCTATGTGATAGTCTTTT+CGG + tig0022494:41272-41291 Msa1400930:CDS 35.0%
AAAATCCTAAACAGCTTCTC+CGG - tig0022494:41401-41420 None:intergenic 35.0%
TGAATTGGAGGATATGGTTA+CGG + tig0022494:41454-41473 Msa1400930:CDS 35.0%
CTGAGTTTGAGAGTTGTATT+CGG + tig0022494:41546-41565 Msa1400930:CDS 35.0%
AGGTAATTCATCACATAACG+AGG - tig0022494:41620-41639 None:intergenic 35.0%
! CTCAGATCTTATAGAGGTTT+TGG + tig0022494:41898-41917 Msa1400930:CDS 35.0%
! CAGATCTTATAGAGGTTTTG+GGG + tig0022494:41900-41919 Msa1400930:CDS 35.0%
!! AGATCTTATAGAGGTTTTGG+GGG + tig0022494:41901-41920 Msa1400930:CDS 35.0%
CTCTAATAATGCATCAAGGA+TGG + tig0022494:42036-42055 Msa1400930:CDS 35.0%
ATACATCAAGTATGTACCAG+AGG + tig0022494:42249-42268 Msa1400930:CDS 35.0%
CTTATGTGATGTAATACAGC+AGG - tig0022494:42313-42332 None:intergenic 35.0%
CTGCTGTATTACATCACATA+AGG + tig0022494:42311-42330 Msa1400930:CDS 35.0%
ATGTCTTCACGATCTTCTTT+GGG - tig0022494:40423-40442 None:intergenic 35.0%
! CTGTTGATGAGATTATTCAG+TGG + tig0022494:40670-40689 Msa1400930:CDS 35.0%
TGATGAGATTATTCAGTGGA+TGG + tig0022494:40674-40693 Msa1400930:CDS 35.0%
! GTTTTTCCAGCGGAATTAAT+CGG - tig0022494:40720-40739 None:intergenic 35.0%
ATTAATTCCGCTGGAAAAAC+CGG + tig0022494:40720-40739 Msa1400930:CDS 35.0%
AGAATTATCATCAAACCCAC+CGG - tig0022494:40910-40929 None:intergenic 35.0%
! GTGGGTTTGATGATAATTCT+GGG + tig0022494:40910-40929 Msa1400930:CDS 35.0%
!! GATGATAATTCTGGGAGTTT+TGG + tig0022494:40918-40937 Msa1400930:CDS 35.0%
!!! TTGTTAGGGTTTTGTTGAGT+GGG + tig0022494:41243-41262 Msa1400930:CDS 35.0%
! AGGCTATGTGATAGTCTTTT+CGG + tig0022494:41272-41291 Msa1400930:CDS 35.0%
AAAATCCTAAACAGCTTCTC+CGG - tig0022494:41401-41420 None:intergenic 35.0%
TGAATTGGAGGATATGGTTA+CGG + tig0022494:41454-41473 Msa1400930:CDS 35.0%
CTGAGTTTGAGAGTTGTATT+CGG + tig0022494:41546-41565 Msa1400930:CDS 35.0%
AGGTAATTCATCACATAACG+AGG - tig0022494:41620-41639 None:intergenic 35.0%
! CTCAGATCTTATAGAGGTTT+TGG + tig0022494:41898-41917 Msa1400930:CDS 35.0%
! CAGATCTTATAGAGGTTTTG+GGG + tig0022494:41900-41919 Msa1400930:CDS 35.0%
!! AGATCTTATAGAGGTTTTGG+GGG + tig0022494:41901-41920 Msa1400930:CDS 35.0%
CTCTAATAATGCATCAAGGA+TGG + tig0022494:42036-42055 Msa1400930:CDS 35.0%
ATACATCAAGTATGTACCAG+AGG + tig0022494:42249-42268 Msa1400930:CDS 35.0%
CTTATGTGATGTAATACAGC+AGG - tig0022494:42313-42332 None:intergenic 35.0%
CTGCTGTATTACATCACATA+AGG + tig0022494:42311-42330 Msa1400930:CDS 35.0%
!! GATCTTCTTTGGGAGCTTTT+AGG - tig0022494:40413-40432 None:intergenic 40.0%
CATGTCTTCACGATCTTCTT+TGG - tig0022494:40424-40443 None:intergenic 40.0%
AGTTGATTGACGAGAAGACT+CGG - tig0022494:40607-40626 None:intergenic 40.0%
! ACAGCGTTGAAATAGACTTC+AGG - tig0022494:40654-40673 None:intergenic 40.0%
!!! AATCTTACCGGTTTTTCCAG+CGG - tig0022494:40730-40749 None:intergenic 40.0%
GATTTGTAATACTGTTCCGC+CGG + tig0022494:40821-40840 Msa1400930:CDS 40.0%
TTAGCCGGTGTAGTACTAAT+AGG + tig0022494:40850-40869 Msa1400930:CDS 40.0%
TCCTCCTATTAGTACTACAC+CGG - tig0022494:40857-40876 None:intergenic 40.0%
! GGTGGGTTTGATGATAATTC+TGG + tig0022494:40909-40928 Msa1400930:CDS 40.0%
TCATGAAACCTATGAGAACC+AGG - tig0022494:40957-40976 None:intergenic 40.0%
TCTCATAGGTTTCATGAACG+TGG + tig0022494:40960-40979 Msa1400930:CDS 40.0%
GTTGAGTGTTTGGCAATTCT+GGG + tig0022494:41128-41147 Msa1400930:CDS 40.0%
GAAGTTTGAGTGGAAGAGTT+TGG + tig0022494:41181-41200 Msa1400930:CDS 40.0%
TGGATGAGAGGATGAAGAAT+TGG + tig0022494:41201-41220 Msa1400930:CDS 40.0%
GGATGAGAGGATGAAGAATT+GGG + tig0022494:41202-41221 Msa1400930:CDS 40.0%
AAGCTGTTAAGGTCGTTGTT+AGG + tig0022494:41228-41247 Msa1400930:CDS 40.0%
AGCTGTTAAGGTCGTTGTTA+GGG + tig0022494:41229-41248 Msa1400930:CDS 40.0%
!!! GTTGTTAGGGTTTTGTTGAG+TGG + tig0022494:41242-41261 Msa1400930:CDS 40.0%
!!! TGTTAGGGTTTTGTTGAGTG+GGG + tig0022494:41244-41263 Msa1400930:CDS 40.0%
! TGATAGTCTTTTCGGTGATC+TGG + tig0022494:41280-41299 Msa1400930:CDS 40.0%
! AAGCAGTTGCCATTTGTAAG+AGG + tig0022494:41372-41391 Msa1400930:CDS 40.0%
!! GGAGAAGCTGTTTAGGATTT+TGG + tig0022494:41400-41419 Msa1400930:CDS 40.0%
TTTGCCTGAATTGGAGGATA+TGG + tig0022494:41448-41467 Msa1400930:CDS 40.0%
GTAACCATATCCTCCAATTC+AGG - tig0022494:41455-41474 None:intergenic 40.0%
GGATGAGTTTGTGATTACTG+AGG + tig0022494:41475-41494 Msa1400930:CDS 40.0%
TTTGTGATTACTGAGGCGAA+GGG + tig0022494:41482-41501 Msa1400930:CDS 40.0%
TGAACATCCCCAGTTATAAC+CGG - tig0022494:41590-41609 None:intergenic 40.0%
TTCATCACATAACGAGGCAA+AGG - tig0022494:41614-41633 None:intergenic 40.0%
GAATTACCTGAAACTGCTTG+CGG + tig0022494:41631-41650 Msa1400930:CDS 40.0%
TATAATCCGCAAGCAGTTTC+AGG - tig0022494:41640-41659 None:intergenic 40.0%
!! GCTTTTGGAAATCAGTGAAG+AGG + tig0022494:41676-41695 Msa1400930:CDS 40.0%
ACAATATCTGTCGTCCTAGA+GGG - tig0022494:41760-41779 None:intergenic 40.0%
AACAATATCTGTCGTCCTAG+AGG - tig0022494:41761-41780 None:intergenic 40.0%
TGAACTTGAGCACAATCTTG+AGG + tig0022494:41790-41809 Msa1400930:CDS 40.0%
GATGAACAATCTGCATTACC+TGG + tig0022494:41859-41878 Msa1400930:CDS 40.0%
GAAGGACTCAGATCTTATAG+AGG + tig0022494:41892-41911 Msa1400930:CDS 40.0%
!!! TAGAGGTTTTGGGGGATAAT+TGG + tig0022494:41909-41928 Msa1400930:CDS 40.0%
!!! AGAGGTTTTGGGGGATAATT+GGG + tig0022494:41910-41929 Msa1400930:CDS 40.0%
! GGAGCTCTAATAATGCATCA+AGG + tig0022494:42032-42051 Msa1400930:CDS 40.0%
AGATAAGTCTCTAGATCCTC+TGG - tig0022494:42268-42287 None:intergenic 40.0%
!! GATCTTCTTTGGGAGCTTTT+AGG - tig0022494:40413-40432 None:intergenic 40.0%
CATGTCTTCACGATCTTCTT+TGG - tig0022494:40424-40443 None:intergenic 40.0%
AGTTGATTGACGAGAAGACT+CGG - tig0022494:40607-40626 None:intergenic 40.0%
! ACAGCGTTGAAATAGACTTC+AGG - tig0022494:40654-40673 None:intergenic 40.0%
!!! AATCTTACCGGTTTTTCCAG+CGG - tig0022494:40730-40749 None:intergenic 40.0%
GATTTGTAATACTGTTCCGC+CGG + tig0022494:40821-40840 Msa1400930:CDS 40.0%
TTAGCCGGTGTAGTACTAAT+AGG + tig0022494:40850-40869 Msa1400930:CDS 40.0%
TCCTCCTATTAGTACTACAC+CGG - tig0022494:40857-40876 None:intergenic 40.0%
! GGTGGGTTTGATGATAATTC+TGG + tig0022494:40909-40928 Msa1400930:CDS 40.0%
TCATGAAACCTATGAGAACC+AGG - tig0022494:40957-40976 None:intergenic 40.0%
TCTCATAGGTTTCATGAACG+TGG + tig0022494:40960-40979 Msa1400930:CDS 40.0%
GTTGAGTGTTTGGCAATTCT+GGG + tig0022494:41128-41147 Msa1400930:CDS 40.0%
GAAGTTTGAGTGGAAGAGTT+TGG + tig0022494:41181-41200 Msa1400930:CDS 40.0%
TGGATGAGAGGATGAAGAAT+TGG + tig0022494:41201-41220 Msa1400930:CDS 40.0%
GGATGAGAGGATGAAGAATT+GGG + tig0022494:41202-41221 Msa1400930:CDS 40.0%
AAGCTGTTAAGGTCGTTGTT+AGG + tig0022494:41228-41247 Msa1400930:CDS 40.0%
AGCTGTTAAGGTCGTTGTTA+GGG + tig0022494:41229-41248 Msa1400930:CDS 40.0%
!!! GTTGTTAGGGTTTTGTTGAG+TGG + tig0022494:41242-41261 Msa1400930:CDS 40.0%
!!! TGTTAGGGTTTTGTTGAGTG+GGG + tig0022494:41244-41263 Msa1400930:CDS 40.0%
! TGATAGTCTTTTCGGTGATC+TGG + tig0022494:41280-41299 Msa1400930:CDS 40.0%
! AAGCAGTTGCCATTTGTAAG+AGG + tig0022494:41372-41391 Msa1400930:CDS 40.0%
!! GGAGAAGCTGTTTAGGATTT+TGG + tig0022494:41400-41419 Msa1400930:CDS 40.0%
TTTGCCTGAATTGGAGGATA+TGG + tig0022494:41448-41467 Msa1400930:CDS 40.0%
GTAACCATATCCTCCAATTC+AGG - tig0022494:41455-41474 None:intergenic 40.0%
GGATGAGTTTGTGATTACTG+AGG + tig0022494:41475-41494 Msa1400930:CDS 40.0%
TTTGTGATTACTGAGGCGAA+GGG + tig0022494:41482-41501 Msa1400930:CDS 40.0%
TGAACATCCCCAGTTATAAC+CGG - tig0022494:41590-41609 None:intergenic 40.0%
TTCATCACATAACGAGGCAA+AGG - tig0022494:41614-41633 None:intergenic 40.0%
GAATTACCTGAAACTGCTTG+CGG + tig0022494:41631-41650 Msa1400930:CDS 40.0%
TATAATCCGCAAGCAGTTTC+AGG - tig0022494:41640-41659 None:intergenic 40.0%
!! GCTTTTGGAAATCAGTGAAG+AGG + tig0022494:41676-41695 Msa1400930:CDS 40.0%
ACAATATCTGTCGTCCTAGA+GGG - tig0022494:41760-41779 None:intergenic 40.0%
AACAATATCTGTCGTCCTAG+AGG - tig0022494:41761-41780 None:intergenic 40.0%
TGAACTTGAGCACAATCTTG+AGG + tig0022494:41790-41809 Msa1400930:CDS 40.0%
GATGAACAATCTGCATTACC+TGG + tig0022494:41859-41878 Msa1400930:CDS 40.0%
GAAGGACTCAGATCTTATAG+AGG + tig0022494:41892-41911 Msa1400930:CDS 40.0%
!!! TAGAGGTTTTGGGGGATAAT+TGG + tig0022494:41909-41928 Msa1400930:CDS 40.0%
!!! AGAGGTTTTGGGGGATAATT+GGG + tig0022494:41910-41929 Msa1400930:CDS 40.0%
! GGAGCTCTAATAATGCATCA+AGG + tig0022494:42032-42051 Msa1400930:CDS 40.0%
AGATAAGTCTCTAGATCCTC+TGG - tig0022494:42268-42287 None:intergenic 40.0%
! TGGGAGCTTTTAGGCTTTTG+AGG - tig0022494:40404-40423 None:intergenic 45.0%
! GTTGATAAGGTCGGTGATAC+CGG - tig0022494:40481-40500 None:intergenic 45.0%
GGTATCACCGACCTTATCAA+CGG + tig0022494:40480-40499 Msa1400930:CDS 45.0%
GTCGTCGGATTTGGAAGATT+TGG - tig0022494:40514-40533 None:intergenic 45.0%
TAGACTTCAGGATCATTCGG+AGG - tig0022494:40642-40661 None:intergenic 45.0%
TTTCCAGCGGAATTAATCGG+CGG - tig0022494:40717-40736 None:intergenic 45.0%
TTCGATGTCTTTCAGTTCGC+AGG + tig0022494:40878-40897 Msa1400930:CDS 45.0%
ATGTCTTTCAGTTCGCAGGA+CGG + tig0022494:40882-40901 Msa1400930:CDS 45.0%
!!! TTCTGGGAGTTTTGGTGATG+TGG + tig0022494:40926-40945 Msa1400930:CDS 45.0%
!!! TCTGGGAGTTTTGGTGATGT+GGG + tig0022494:40927-40946 Msa1400930:CDS 45.0%
! CATGAACGTGGTGTTAGTCT+TGG + tig0022494:40972-40991 Msa1400930:CDS 45.0%
ATTGATCGGATGGTTAGGTC+TGG + tig0022494:41053-41072 Msa1400930:CDS 45.0%
TGGTTAGGTCTGGATATGAG+AGG + tig0022494:41063-41082 Msa1400930:CDS 45.0%
GGTTAGGTCTGGATATGAGA+GGG + tig0022494:41064-41083 Msa1400930:CDS 45.0%
!! ATATGAGAGGGAGTGTTTGC+AGG + tig0022494:41076-41095 Msa1400930:CDS 45.0%
GGTTGAGTGTTTGGCAATTC+TGG + tig0022494:41127-41146 Msa1400930:CDS 45.0%
! AAGAGGTGCAGAAGTTTGAG+TGG + tig0022494:41171-41190 Msa1400930:CDS 45.0%
AGTGGAAGAGTTTGGATGAG+AGG + tig0022494:41189-41208 Msa1400930:CDS 45.0%
GAATTGGGTGCAAGCTGTTA+AGG + tig0022494:41217-41236 Msa1400930:CDS 45.0%
! TTTTGTTGAGTGGGGAGAAG+AGG + tig0022494:41252-41271 Msa1400930:CDS 45.0%
! TAGTCTTTTCGGTGATCTGG+AGG + tig0022494:41283-41302 Msa1400930:CDS 45.0%
GAGAGATGCTTTGCCTGAAT+TGG + tig0022494:41439-41458 Msa1400930:CDS 45.0%
AGATGCTTTGCCTGAATTGG+AGG + tig0022494:41442-41461 Msa1400930:CDS 45.0%
GTTTGTGATTACTGAGGCGA+AGG + tig0022494:41481-41500 Msa1400930:CDS 45.0%
TTCGGAATGAGACTTCCAGA+AGG + tig0022494:41564-41583 Msa1400930:CDS 45.0%
! TGCGGATTATAGCGATGCTA+TGG + tig0022494:41649-41668 Msa1400930:CDS 45.0%
! CGATGCTATGGATTCGCTTT+TGG + tig0022494:41661-41680 Msa1400930:CDS 45.0%
AGGGGACAAAGCTTCTAACT+GGG - tig0022494:41741-41760 None:intergenic 45.0%
! TTAGAAGCTTTGTCCCCTCT+AGG + tig0022494:41743-41762 Msa1400930:CDS 45.0%
CAATATCTGTCGTCCTAGAG+GGG - tig0022494:41759-41778 None:intergenic 45.0%
AAAACACCTGCTGCAATGCA+TGG - tig0022494:41838-41857 None:intergenic 45.0%
TTACCTGGTGCGTAAAGTGA+AGG + tig0022494:41874-41893 Msa1400930:CDS 45.0%
TTCATCCCTCAAACAAGCCA+AGG - tig0022494:42002-42021 None:intergenic 45.0%
!! TTGGCTTGTTTGAGGGATGA+AGG + tig0022494:42001-42020 Msa1400930:CDS 45.0%
!! TGGCTTGTTTGAGGGATGAA+GGG + tig0022494:42002-42021 Msa1400930:CDS 45.0%
!! TGCATCAAGGATGGCTTTGA+AGG + tig0022494:42045-42064 Msa1400930:CDS 45.0%
TATACAGGGTTCAGACAGCT+TGG + tig0022494:42104-42123 Msa1400930:CDS 45.0%
TAAACCTCCCCATAAACGAG+CGG - tig0022494:42198-42217 None:intergenic 45.0%
TCGTTTATGGGGAGGTTTAG+CGG + tig0022494:42199-42218 Msa1400930:CDS 45.0%
! TGGGAGCTTTTAGGCTTTTG+AGG - tig0022494:40404-40423 None:intergenic 45.0%
! GTTGATAAGGTCGGTGATAC+CGG - tig0022494:40481-40500 None:intergenic 45.0%
GGTATCACCGACCTTATCAA+CGG + tig0022494:40480-40499 Msa1400930:CDS 45.0%
GTCGTCGGATTTGGAAGATT+TGG - tig0022494:40514-40533 None:intergenic 45.0%
TAGACTTCAGGATCATTCGG+AGG - tig0022494:40642-40661 None:intergenic 45.0%
TTTCCAGCGGAATTAATCGG+CGG - tig0022494:40717-40736 None:intergenic 45.0%
TTCGATGTCTTTCAGTTCGC+AGG + tig0022494:40878-40897 Msa1400930:CDS 45.0%
ATGTCTTTCAGTTCGCAGGA+CGG + tig0022494:40882-40901 Msa1400930:CDS 45.0%
!!! TTCTGGGAGTTTTGGTGATG+TGG + tig0022494:40926-40945 Msa1400930:CDS 45.0%
!!! TCTGGGAGTTTTGGTGATGT+GGG + tig0022494:40927-40946 Msa1400930:CDS 45.0%
! CATGAACGTGGTGTTAGTCT+TGG + tig0022494:40972-40991 Msa1400930:CDS 45.0%
ATTGATCGGATGGTTAGGTC+TGG + tig0022494:41053-41072 Msa1400930:CDS 45.0%
TGGTTAGGTCTGGATATGAG+AGG + tig0022494:41063-41082 Msa1400930:CDS 45.0%
GGTTAGGTCTGGATATGAGA+GGG + tig0022494:41064-41083 Msa1400930:CDS 45.0%
!! ATATGAGAGGGAGTGTTTGC+AGG + tig0022494:41076-41095 Msa1400930:CDS 45.0%
GGTTGAGTGTTTGGCAATTC+TGG + tig0022494:41127-41146 Msa1400930:CDS 45.0%
! AAGAGGTGCAGAAGTTTGAG+TGG + tig0022494:41171-41190 Msa1400930:CDS 45.0%
AGTGGAAGAGTTTGGATGAG+AGG + tig0022494:41189-41208 Msa1400930:CDS 45.0%
GAATTGGGTGCAAGCTGTTA+AGG + tig0022494:41217-41236 Msa1400930:CDS 45.0%
! TTTTGTTGAGTGGGGAGAAG+AGG + tig0022494:41252-41271 Msa1400930:CDS 45.0%
! TAGTCTTTTCGGTGATCTGG+AGG + tig0022494:41283-41302 Msa1400930:CDS 45.0%
GAGAGATGCTTTGCCTGAAT+TGG + tig0022494:41439-41458 Msa1400930:CDS 45.0%
AGATGCTTTGCCTGAATTGG+AGG + tig0022494:41442-41461 Msa1400930:CDS 45.0%
GTTTGTGATTACTGAGGCGA+AGG + tig0022494:41481-41500 Msa1400930:CDS 45.0%
TTCGGAATGAGACTTCCAGA+AGG + tig0022494:41564-41583 Msa1400930:CDS 45.0%
! TGCGGATTATAGCGATGCTA+TGG + tig0022494:41649-41668 Msa1400930:CDS 45.0%
! CGATGCTATGGATTCGCTTT+TGG + tig0022494:41661-41680 Msa1400930:CDS 45.0%
AGGGGACAAAGCTTCTAACT+GGG - tig0022494:41741-41760 None:intergenic 45.0%
! TTAGAAGCTTTGTCCCCTCT+AGG + tig0022494:41743-41762 Msa1400930:CDS 45.0%
CAATATCTGTCGTCCTAGAG+GGG - tig0022494:41759-41778 None:intergenic 45.0%
AAAACACCTGCTGCAATGCA+TGG - tig0022494:41838-41857 None:intergenic 45.0%
TTACCTGGTGCGTAAAGTGA+AGG + tig0022494:41874-41893 Msa1400930:CDS 45.0%
TTCATCCCTCAAACAAGCCA+AGG - tig0022494:42002-42021 None:intergenic 45.0%
!! TTGGCTTGTTTGAGGGATGA+AGG + tig0022494:42001-42020 Msa1400930:CDS 45.0%
!! TGGCTTGTTTGAGGGATGAA+GGG + tig0022494:42002-42021 Msa1400930:CDS 45.0%
!! TGCATCAAGGATGGCTTTGA+AGG + tig0022494:42045-42064 Msa1400930:CDS 45.0%
TATACAGGGTTCAGACAGCT+TGG + tig0022494:42104-42123 Msa1400930:CDS 45.0%
TAAACCTCCCCATAAACGAG+CGG - tig0022494:42198-42217 None:intergenic 45.0%
TCGTTTATGGGGAGGTTTAG+CGG + tig0022494:42199-42218 Msa1400930:CDS 45.0%
! ATCGTCGCCGTTGATAAGGT+CGG - tig0022494:40490-40509 None:intergenic 50.0%
TGGAATCGTCGCCGTTGATA+AGG - tig0022494:40494-40513 None:intergenic 50.0%
CTTTCTCCGCAGCTTCGAAT+CGG - tig0022494:40557-40576 None:intergenic 50.0%
TGATTGACGAGAAGACTCGG+TGG - tig0022494:40604-40623 None:intergenic 50.0%
GCCGGTGTAGTACTAATAGG+AGG + tig0022494:40853-40872 Msa1400930:CDS 50.0%
!! TTTGGTGATGTGGGTGATCC+TGG + tig0022494:40936-40955 Msa1400930:CDS 50.0%
! TGGGTGATCCTGGTTCTCAT+AGG + tig0022494:40946-40965 Msa1400930:CDS 50.0%
!! TGACGCGTTGGTTGAGTGTT+TGG + tig0022494:41118-41137 Msa1400930:CDS 50.0%
! TGCCATTTGTAAGAGGTCGC+CGG + tig0022494:41379-41398 Msa1400930:CDS 50.0%
! AAGGGTGTGCTTAGAGGACT+TGG + tig0022494:41500-41519 Msa1400930:CDS 50.0%
AGGGTGTGCTTAGAGGACTT+GGG + tig0022494:41501-41520 Msa1400930:CDS 50.0%
GAATGAGACTTCCAGAAGGC+CGG + tig0022494:41568-41587 Msa1400930:CDS 50.0%
TCCAGAAGGCCGGTTATAAC+TGG + tig0022494:41578-41597 Msa1400930:CDS 50.0%
CCAGAAGGCCGGTTATAACT+GGG + tig0022494:41579-41598 Msa1400930:CDS 50.0%
CAGAAGGCCGGTTATAACTG+GGG + tig0022494:41580-41599 Msa1400930:CDS 50.0%
GAGGGGACAAAGCTTCTAAC+TGG - tig0022494:41742-41761 None:intergenic 50.0%
AGTCCTTCACTTTACGCACC+AGG - tig0022494:41880-41899 None:intergenic 50.0%
TCAGGTACGGCAGTATGCTA+CGG + tig0022494:41949-41968 Msa1400930:CDS 50.0%
!! CAAGGCCTTGGCTTGTTTGA+GGG + tig0022494:41994-42013 Msa1400930:CDS 50.0%
! GGCTTGTTTGAGGGATGAAG+GGG + tig0022494:42003-42022 Msa1400930:CDS 50.0%
TGTTTGAGGGATGAAGGGGT+TGG + tig0022494:42007-42026 Msa1400930:CDS 50.0%
TCTTCACGAAGCTGGTCATC+GGG - tig0022494:42136-42155 None:intergenic 50.0%
CTCTTCACGAAGCTGGTCAT+CGG - tig0022494:42137-42156 None:intergenic 50.0%
TTCGCATCTCTTCACGAAGC+TGG - tig0022494:42144-42163 None:intergenic 50.0%
ACCTGCATACCGCTCGTTTA+TGG + tig0022494:42186-42205 Msa1400930:CDS 50.0%
CCTGCATACCGCTCGTTTAT+GGG + tig0022494:42187-42206 Msa1400930:CDS 50.0%
CTGCATACCGCTCGTTTATG+GGG + tig0022494:42188-42207 Msa1400930:CDS 50.0%
! ATCGTCGCCGTTGATAAGGT+CGG - tig0022494:40490-40509 None:intergenic 50.0%
TGGAATCGTCGCCGTTGATA+AGG - tig0022494:40494-40513 None:intergenic 50.0%
CTTTCTCCGCAGCTTCGAAT+CGG - tig0022494:40557-40576 None:intergenic 50.0%
TGATTGACGAGAAGACTCGG+TGG - tig0022494:40604-40623 None:intergenic 50.0%
GCCGGTGTAGTACTAATAGG+AGG + tig0022494:40853-40872 Msa1400930:CDS 50.0%
!! TTTGGTGATGTGGGTGATCC+TGG + tig0022494:40936-40955 Msa1400930:CDS 50.0%
! TGGGTGATCCTGGTTCTCAT+AGG + tig0022494:40946-40965 Msa1400930:CDS 50.0%
!! TGACGCGTTGGTTGAGTGTT+TGG + tig0022494:41118-41137 Msa1400930:CDS 50.0%
! TGCCATTTGTAAGAGGTCGC+CGG + tig0022494:41379-41398 Msa1400930:CDS 50.0%
! AAGGGTGTGCTTAGAGGACT+TGG + tig0022494:41500-41519 Msa1400930:CDS 50.0%
AGGGTGTGCTTAGAGGACTT+GGG + tig0022494:41501-41520 Msa1400930:CDS 50.0%
GAATGAGACTTCCAGAAGGC+CGG + tig0022494:41568-41587 Msa1400930:CDS 50.0%
TCCAGAAGGCCGGTTATAAC+TGG + tig0022494:41578-41597 Msa1400930:CDS 50.0%
CCAGAAGGCCGGTTATAACT+GGG + tig0022494:41579-41598 Msa1400930:CDS 50.0%
CAGAAGGCCGGTTATAACTG+GGG + tig0022494:41580-41599 Msa1400930:CDS 50.0%
GAGGGGACAAAGCTTCTAAC+TGG - tig0022494:41742-41761 None:intergenic 50.0%
AGTCCTTCACTTTACGCACC+AGG - tig0022494:41880-41899 None:intergenic 50.0%
TCAGGTACGGCAGTATGCTA+CGG + tig0022494:41949-41968 Msa1400930:CDS 50.0%
!! CAAGGCCTTGGCTTGTTTGA+GGG + tig0022494:41994-42013 Msa1400930:CDS 50.0%
! GGCTTGTTTGAGGGATGAAG+GGG + tig0022494:42003-42022 Msa1400930:CDS 50.0%
TGTTTGAGGGATGAAGGGGT+TGG + tig0022494:42007-42026 Msa1400930:CDS 50.0%
TCTTCACGAAGCTGGTCATC+GGG - tig0022494:42136-42155 None:intergenic 50.0%
CTCTTCACGAAGCTGGTCAT+CGG - tig0022494:42137-42156 None:intergenic 50.0%
TTCGCATCTCTTCACGAAGC+TGG - tig0022494:42144-42163 None:intergenic 50.0%
ACCTGCATACCGCTCGTTTA+TGG + tig0022494:42186-42205 Msa1400930:CDS 50.0%
CCTGCATACCGCTCGTTTAT+GGG + tig0022494:42187-42206 Msa1400930:CDS 50.0%
CTGCATACCGCTCGTTTATG+GGG + tig0022494:42188-42207 Msa1400930:CDS 50.0%
ACCTTCGACAACCGTCTCTC+CGG + tig0022494:40459-40478 Msa1400930:CDS 55.0%
!! CCTTGACCGATTCGAAGCTG+CGG + tig0022494:40548-40567 Msa1400930:CDS 55.0%
CGATCCAAGTTGCCATGTCG+AGG + tig0022494:40772-40791 Msa1400930:CDS 55.0%
! CTACACCGGCTAACAGCATC+CGG - tig0022494:40843-40862 None:intergenic 55.0%
CGGTGATCTGGAGGATGTGA+AGG + tig0022494:41292-41311 Msa1400930:CDS 55.0%
CTCCGGCGACCTCTTACAAA+TGG - tig0022494:41384-41403 None:intergenic 55.0%
GGGTGTGCTTAGAGGACTTG+GGG + tig0022494:41502-41521 Msa1400930:CDS 55.0%
TGTGCTTAGAGGACTTGGGG+AGG + tig0022494:41505-41524 Msa1400930:CDS 55.0%
GACTTGGGGAGGCTGTGAAA+GGG + tig0022494:41516-41535 Msa1400930:CDS 55.0%
CCCAGTTATAACCGGCCTTC+TGG - tig0022494:41582-41601 None:intergenic 55.0%
CGAAGACCATGCATTGCAGC+AGG + tig0022494:41829-41848 Msa1400930:CDS 55.0%
! AATTGGGTTCGTAAGCGCCG+CGG + tig0022494:41926-41945 Msa1400930:CDS 55.0%
CAGGTACGGCAGTATGCTAC+GGG + tig0022494:41950-41969 Msa1400930:CDS 55.0%
AGGTACGGCAGTATGCTACG+GGG + tig0022494:41951-41970 Msa1400930:CDS 55.0%
CCTTGCTCCAACAGGCTCTA+AGG - tig0022494:41979-41998 None:intergenic 55.0%
CCTTAGAGCCTGTTGGAGCA+AGG + tig0022494:41976-41995 Msa1400930:CDS 55.0%
!! GCAAGGCCTTGGCTTGTTTG+AGG + tig0022494:41993-42012 Msa1400930:CDS 55.0%
TTGAGGGATGAAGGGGTTGG+AGG + tig0022494:42010-42029 Msa1400930:CDS 55.0%
TGAGGGATGAAGGGGTTGGA+GGG + tig0022494:42011-42030 Msa1400930:CDS 55.0%
CAGGGTTCAGACAGCTTGGA+AGG + tig0022494:42108-42127 Msa1400930:CDS 55.0%
CCCATAAACGAGCGGTATGC+AGG - tig0022494:42190-42209 None:intergenic 55.0%
CATACCGCTCGTTTATGGGG+AGG + tig0022494:42191-42210 Msa1400930:CDS 55.0%
AGGTTTAGCGGTCAGCTGGA+GGG + tig0022494:42211-42230 Msa1400930:CDS 55.0%
ACCTTCGACAACCGTCTCTC+CGG + tig0022494:40459-40478 Msa1400930:CDS 55.0%
!! CCTTGACCGATTCGAAGCTG+CGG + tig0022494:40548-40567 Msa1400930:CDS 55.0%
CGATCCAAGTTGCCATGTCG+AGG + tig0022494:40772-40791 Msa1400930:CDS 55.0%
! CTACACCGGCTAACAGCATC+CGG - tig0022494:40843-40862 None:intergenic 55.0%
CGGTGATCTGGAGGATGTGA+AGG + tig0022494:41292-41311 Msa1400930:CDS 55.0%
CTCCGGCGACCTCTTACAAA+TGG - tig0022494:41384-41403 None:intergenic 55.0%
GGGTGTGCTTAGAGGACTTG+GGG + tig0022494:41502-41521 Msa1400930:CDS 55.0%
TGTGCTTAGAGGACTTGGGG+AGG + tig0022494:41505-41524 Msa1400930:CDS 55.0%
GACTTGGGGAGGCTGTGAAA+GGG + tig0022494:41516-41535 Msa1400930:CDS 55.0%
CCCAGTTATAACCGGCCTTC+TGG - tig0022494:41582-41601 None:intergenic 55.0%
CGAAGACCATGCATTGCAGC+AGG + tig0022494:41829-41848 Msa1400930:CDS 55.0%
! AATTGGGTTCGTAAGCGCCG+CGG + tig0022494:41926-41945 Msa1400930:CDS 55.0%
CAGGTACGGCAGTATGCTAC+GGG + tig0022494:41950-41969 Msa1400930:CDS 55.0%
AGGTACGGCAGTATGCTACG+GGG + tig0022494:41951-41970 Msa1400930:CDS 55.0%
CCTTGCTCCAACAGGCTCTA+AGG - tig0022494:41979-41998 None:intergenic 55.0%
CCTTAGAGCCTGTTGGAGCA+AGG + tig0022494:41976-41995 Msa1400930:CDS 55.0%
!! GCAAGGCCTTGGCTTGTTTG+AGG + tig0022494:41993-42012 Msa1400930:CDS 55.0%
TTGAGGGATGAAGGGGTTGG+AGG + tig0022494:42010-42029 Msa1400930:CDS 55.0%
TGAGGGATGAAGGGGTTGGA+GGG + tig0022494:42011-42030 Msa1400930:CDS 55.0%
CAGGGTTCAGACAGCTTGGA+AGG + tig0022494:42108-42127 Msa1400930:CDS 55.0%
CCCATAAACGAGCGGTATGC+AGG - tig0022494:42190-42209 None:intergenic 55.0%
CATACCGCTCGTTTATGGGG+AGG + tig0022494:42191-42210 Msa1400930:CDS 55.0%
AGGTTTAGCGGTCAGCTGGA+GGG + tig0022494:42211-42230 Msa1400930:CDS 55.0%
GGAGAGACGGTTGTCGAAGG+TGG - tig0022494:40460-40479 None:intergenic 60.0%
ACCGGAGAGACGGTTGTCGA+AGG - tig0022494:40463-40482 None:intergenic 60.0%
GGTCGGTGATACCGGAGAGA+CGG - tig0022494:40473-40492 None:intergenic 60.0%
GTCGACGTCGTCGTCGGATT+TGG - tig0022494:40523-40542 None:intergenic 60.0%
GTCTTCGTCGACGTCGTCGT+CGG - tig0022494:40529-40548 None:intergenic 60.0%
CCGCAGCTTCGAATCGGTCA+AGG - tig0022494:40551-40570 None:intergenic 60.0%
! TCGCCGCCGATTAATTCCGC+TGG + tig0022494:40711-40730 Msa1400930:CDS 60.0%
CGAGCCTCGACATGGCAACT+TGG - tig0022494:40779-40798 None:intergenic 60.0%
AGTTGCCATGTCGAGGCTCG+AGG + tig0022494:40779-40798 Msa1400930:CDS 60.0%
CTCATCCTCGAGCCTCGACA+TGG - tig0022494:40787-40806 None:intergenic 60.0%
TTCCGCCGGATGCTGTTAGC+CGG + tig0022494:40835-40854 Msa1400930:CDS 60.0%
TTCAGTTCGCAGGACGGTGC+CGG + tig0022494:40888-40907 Msa1400930:CDS 60.0%
TAGCGTTCGTCGTGACGCGT+TGG + tig0022494:41106-41125 Msa1400930:CDS 60.0%
GGTCGCCGGAGAAGCTGTTT+AGG + tig0022494:41393-41412 Msa1400930:CDS 60.0%
! GAGGCGAAGGGTGTGCTTAG+AGG + tig0022494:41494-41513 Msa1400930:CDS 60.0%
GGACTTGGGGAGGCTGTGAA+AGG + tig0022494:41515-41534 Msa1400930:CDS 60.0%
CATACTGCCGTACCTGACCG+CGG - tig0022494:41946-41965 None:intergenic 60.0%
! CGGGGTACCTTAGAGCCTGT+TGG + tig0022494:41969-41988 Msa1400930:CDS 60.0%
AGCCTGTTGGAGCAAGGCCT+TGG + tig0022494:41982-42001 Msa1400930:CDS 60.0%
AGCCAAGGCCTTGCTCCAAC+AGG - tig0022494:41987-42006 None:intergenic 60.0%
GAGGTTTAGCGGTCAGCTGG+AGG + tig0022494:42210-42229 Msa1400930:CDS 60.0%
CAGCTGGAGGGAAGACATGC+AGG + tig0022494:42223-42242 Msa1400930:CDS 60.0%
GGAGAGACGGTTGTCGAAGG+TGG - tig0022494:40460-40479 None:intergenic 60.0%
ACCGGAGAGACGGTTGTCGA+AGG - tig0022494:40463-40482 None:intergenic 60.0%
GGTCGGTGATACCGGAGAGA+CGG - tig0022494:40473-40492 None:intergenic 60.0%
GTCGACGTCGTCGTCGGATT+TGG - tig0022494:40523-40542 None:intergenic 60.0%
GTCTTCGTCGACGTCGTCGT+CGG - tig0022494:40529-40548 None:intergenic 60.0%
CCGCAGCTTCGAATCGGTCA+AGG - tig0022494:40551-40570 None:intergenic 60.0%
! TCGCCGCCGATTAATTCCGC+TGG + tig0022494:40711-40730 Msa1400930:CDS 60.0%
CGAGCCTCGACATGGCAACT+TGG - tig0022494:40779-40798 None:intergenic 60.0%
AGTTGCCATGTCGAGGCTCG+AGG + tig0022494:40779-40798 Msa1400930:CDS 60.0%
CTCATCCTCGAGCCTCGACA+TGG - tig0022494:40787-40806 None:intergenic 60.0%
TTCCGCCGGATGCTGTTAGC+CGG + tig0022494:40835-40854 Msa1400930:CDS 60.0%
TTCAGTTCGCAGGACGGTGC+CGG + tig0022494:40888-40907 Msa1400930:CDS 60.0%
TAGCGTTCGTCGTGACGCGT+TGG + tig0022494:41106-41125 Msa1400930:CDS 60.0%
GGTCGCCGGAGAAGCTGTTT+AGG + tig0022494:41393-41412 Msa1400930:CDS 60.0%
! GAGGCGAAGGGTGTGCTTAG+AGG + tig0022494:41494-41513 Msa1400930:CDS 60.0%
GGACTTGGGGAGGCTGTGAA+AGG + tig0022494:41515-41534 Msa1400930:CDS 60.0%
CATACTGCCGTACCTGACCG+CGG - tig0022494:41946-41965 None:intergenic 60.0%
! CGGGGTACCTTAGAGCCTGT+TGG + tig0022494:41969-41988 Msa1400930:CDS 60.0%
AGCCTGTTGGAGCAAGGCCT+TGG + tig0022494:41982-42001 Msa1400930:CDS 60.0%
AGCCAAGGCCTTGCTCCAAC+AGG - tig0022494:41987-42006 None:intergenic 60.0%
GAGGTTTAGCGGTCAGCTGG+AGG + tig0022494:42210-42229 Msa1400930:CDS 60.0%
CAGCTGGAGGGAAGACATGC+AGG + tig0022494:42223-42242 Msa1400930:CDS 60.0%
! CACCGGCTAACAGCATCCGG+CGG - tig0022494:40840-40859 None:intergenic 65.0%
! GTAAGCGCCGCGGTCAGGTA+CGG + tig0022494:41936-41955 Msa1400930:CDS 65.0%
GGGGAGGTTTAGCGGTCAGC+TGG + tig0022494:42207-42226 Msa1400930:CDS 65.0%
! CACCGGCTAACAGCATCCGG+CGG - tig0022494:40840-40859 None:intergenic 65.0%
! GTAAGCGCCGCGGTCAGGTA+CGG + tig0022494:41936-41955 Msa1400930:CDS 65.0%
GGGGAGGTTTAGCGGTCAGC+TGG + tig0022494:42207-42226 Msa1400930:CDS 65.0%
GCCGCCACCACCACCAACCA+CGG + tig0022494:40318-40337 Msa1400930:CDS 70.0%
!! GCCGTGGTTGGTGGTGGTGG+CGG - tig0022494:40322-40341 None:intergenic 70.0%
GCCACCACCACCAACCACGG+CGG + tig0022494:40321-40340 Msa1400930:CDS 70.0%
ACCACCACCAACCACGGCGG+CGG + tig0022494:40324-40343 Msa1400930:CDS 70.0%
TCGATCGTCTCCGCCAGCGC+CGG - tig0022494:40358-40377 None:intergenic 70.0%
! AGTTCGCAGGACGGTGCCGG+TGG + tig0022494:40891-40910 Msa1400930:CDS 70.0%
!! GTTCGCAGGACGGTGCCGGT+GGG + tig0022494:40892-40911 Msa1400930:CDS 70.0%
! GGTTCGTAAGCGCCGCGGTC+AGG + tig0022494:41931-41950 Msa1400930:CDS 70.0%
GCCGCCACCACCACCAACCA+CGG + tig0022494:40318-40337 Msa1400930:CDS 70.0%
!! GCCGTGGTTGGTGGTGGTGG+CGG - tig0022494:40322-40341 None:intergenic 70.0%
GCCACCACCACCAACCACGG+CGG + tig0022494:40321-40340 Msa1400930:CDS 70.0%
ACCACCACCAACCACGGCGG+CGG + tig0022494:40324-40343 Msa1400930:CDS 70.0%
TCGATCGTCTCCGCCAGCGC+CGG - tig0022494:40358-40377 None:intergenic 70.0%
! AGTTCGCAGGACGGTGCCGG+TGG + tig0022494:40891-40910 Msa1400930:CDS 70.0%
!! GTTCGCAGGACGGTGCCGGT+GGG + tig0022494:40892-40911 Msa1400930:CDS 70.0%
! GGTTCGTAAGCGCCGCGGTC+AGG + tig0022494:41931-41950 Msa1400930:CDS 70.0%
!! GCCGCCGTGGTTGGTGGTGG+TGG - tig0022494:40325-40344 None:intergenic 75.0%
ACCACCAACCACGGCGGCGG+CGG + tig0022494:40327-40346 Msa1400930:CDS 75.0%
! ATCGTCTCCGCCAGCGCCGG+TGG - tig0022494:40355-40374 None:intergenic 75.0%
!! GCCGCCGTGGTTGGTGGTGG+TGG - tig0022494:40325-40344 None:intergenic 75.0%
ACCACCAACCACGGCGGCGG+CGG + tig0022494:40327-40346 Msa1400930:CDS 75.0%
! ATCGTCTCCGCCAGCGCCGG+TGG - tig0022494:40355-40374 None:intergenic 75.0%
!!! GCCGCCGCCGTGGTTGGTGG+TGG - tig0022494:40328-40347 None:intergenic 80.0%
! TCCGCCGCCGCCGTGGTTGG+TGG - tig0022494:40331-40350 None:intergenic 80.0%
!!! GCCGCCGCCGTGGTTGGTGG+TGG - tig0022494:40328-40347 None:intergenic 80.0%
! TCCGCCGCCGCCGTGGTTGG+TGG - tig0022494:40331-40350 None:intergenic 80.0%
! GGCTCCGCCGCCGCCGTGGT+TGG - tig0022494:40334-40353 None:intergenic 85.0%
! CACGGCGGCGGCGGAGCCAC+CGG + tig0022494:40336-40355 Msa1400930:CDS 85.0%
!! GGCGGAGCCACCGGCGCTGG+CGG + tig0022494:40345-40364 Msa1400930:CDS 85.0%
! GGCTCCGCCGCCGCCGTGGT+TGG - tig0022494:40334-40353 None:intergenic 85.0%
! CACGGCGGCGGCGGAGCCAC+CGG + tig0022494:40336-40355 Msa1400930:CDS 85.0%
!! GGCGGAGCCACCGGCGCTGG+CGG + tig0022494:40345-40364 Msa1400930:CDS 85.0%
! CGGTGGCTCCGCCGCCGCCG+TGG - tig0022494:40338-40357 None:intergenic 90.0%
! GGCGGCGGAGCCACCGGCGC+TGG + tig0022494:40342-40361 Msa1400930:CDS 90.0%
! CGGTGGCTCCGCCGCCGCCG+TGG - tig0022494:40338-40357 None:intergenic 90.0%
! GGCGGCGGAGCCACCGGCGC+TGG + tig0022494:40342-40361 Msa1400930:CDS 90.0%
Chromosome Type Strat End Strand Name
tig0022494 gene 40315 42348 40315 ID=Msa1400930;Name=Msa1400930
tig0022494 mRNA 40315 42348 40315 ID=Msa1400930-mRNA-1;Parent=Msa1400930;Name=Msa1400930-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|677
tig0022494 exon 40315 42348 40315 ID=Msa1400930-mRNA-1:exon:17992;Parent=Msa1400930-mRNA-1
tig0022494 CDS 40315 42348 40315 ID=Msa1400930-mRNA-1:cds;Parent=Msa1400930-mRNA-1
Gene Sequence

>Msa1400930

ATGGCCGCCACCACCACCAACCACGGCGGCGGCGGAGCCACCGGCGCTGGCGGAGACGATCGAGTTCTCGCAACAGCACAACAGATCCTCAAAAGCCTAAAAGCTCCCAAAGAAGATCGTGAAGACATGCTCTTAATCTTCTCCACCTTCGACAACCGTCTCTCCGGTATCACCGACCTTATCAACGGCGACGATTCCAAATCTTCCAAATCCGACGACGACGTCGACGAAGACCTTGACCGATTCGAAGCTGCGGAGAAAGTCATACTCAATGATTCTTCATTATCCACCGAGTCTTCTCGTCAATCAACTTCGCTTTTCGATCCTCCGAATGATCCTGAAGTCTATTTCAACGCTGTTGATGAGATTATTCAGTGGATGGAACACTTCACGATCTCGCCGCCGATTAATTCCGCTGGAAAAACCGGTAAGATTATATTGGATCGTGCTGATAACGCGATCCAAGTTGCCATGTCGAGGCTCGAGGATGAGCTTCGACATGTGTTGATTTGTAATACTGTTCCGCCGGATGCTGTTAGCCGGTGTAGTACTAATAGGAGGAGTTCGATGTCTTTCAGTTCGCAGGACGGTGCCGGTGGGTTTGATGATAATTCTGGGAGTTTTGGTGATGTGGGTGATCCTGGTTCTCATAGGTTTCATGAACGTGGTGTTAGTCTTGGTGATGATTTATTTGTTGATTTGGTTCGTCCTGAATCAATTTTGAATTTGAAAGATATTATTGATCGGATGGTTAGGTCTGGATATGAGAGGGAGTGTTTGCAGGTTTATAGTAGCGTTCGTCGTGACGCGTTGGTTGAGTGTTTGGCAATTCTGGGAGTTGAGAAATTGAGTATTGAAGAGGTGCAGAAGTTTGAGTGGAAGAGTTTGGATGAGAGGATGAAGAATTGGGTGCAAGCTGTTAAGGTCGTTGTTAGGGTTTTGTTGAGTGGGGAGAAGAGGCTATGTGATAGTCTTTTCGGTGATCTGGAGGATGTGAAGGAGATGTGTTTCAATGAAACAGCTAAAGGTTGTGTTATGATGTTGTTGAATTTTGGCGAAGCAGTTGCCATTTGTAAGAGGTCGCCGGAGAAGCTGTTTAGGATTTTGGATATGTATGAGGTTCTGAGAGATGCTTTGCCTGAATTGGAGGATATGGTTACGGATGAGTTTGTGATTACTGAGGCGAAGGGTGTGCTTAGAGGACTTGGGGAGGCTGTGAAAGGGACGTTTGCTGAGTTTGAGAGTTGTATTCGGAATGAGACTTCCAGAAGGCCGGTTATAACTGGGGATGTTCATCCTTTGCCTCGTTATGTGATGAATTACCTGAAACTGCTTGCGGATTATAGCGATGCTATGGATTCGCTTTTGGAAATCAGTGAAGAGGCTCTTTATCACTTTAAAAATGATTTGGGTGGTGATGAATCCCAGTTAGAAGCTTTGTCCCCTCTAGGACGACAGATATTGTTGTTGATGTCTGAACTTGAGCACAATCTTGAGGAAAAATCAAAACTTTACGAAGACCATGCATTGCAGCAGGTGTTTTTGATGAACAATCTGCATTACCTGGTGCGTAAAGTGAAGGACTCAGATCTTATAGAGGTTTTGGGGGATAATTGGGTTCGTAAGCGCCGCGGTCAGGTACGGCAGTATGCTACGGGGTACCTTAGAGCCTGTTGGAGCAAGGCCTTGGCTTGTTTGAGGGATGAAGGGGTTGGAGGGAGCTCTAATAATGCATCAAGGATGGCTTTGAAGGAGAGATTCAAGAATTTCAACGCGTGTTTTGAAGATATATACAGGGTTCAGACAGCTTGGAAGGTACCCGATGACCAGCTTCGTGAAGAGATGCGAATAAATATATCAGAGAAGGTGATACCTGCATACCGCTCGTTTATGGGGAGGTTTAGCGGTCAGCTGGAGGGAAGACATGCAGGCAAATACATCAAGTATGTACCAGAGGATCTAGAGACTTATCTATTAGATTTATTTGAAGGATCACCTGCTGTATTACATCACATAAGGAGAAAGAGTACATAG
Protein sequence

>Msa1400930

MAATTTNHGGGGATGAGGDDRVLATAQQILKSLKAPKEDREDMLLIFSTFDNRLSGITDLINGDDSKSSKSDDDVDEDLDRFEAAEKVILNDSSLSTESSRQSTSLFDPPNDPEVYFNAVDEIIQWMEHFTISPPINSAGKTGKIILDRADNAIQVAMSRLEDELRHVLICNTVPPDAVSRCSTNRRSSMSFSSQDGAGGFDDNSGSFGDVGDPGSHRFHERGVSLGDDLFVDLVRPESILNLKDIIDRMVRSGYERECLQVYSSVRRDALVECLAILGVEKLSIEEVQKFEWKSLDERMKNWVQAVKVVVRVLLSGEKRLCDSLFGDLEDVKEMCFNETAKGCVMMLLNFGEAVAICKRSPEKLFRILDMYEVLRDALPELEDMVTDEFVITEAKGVLRGLGEAVKGTFAEFESCIRNETSRRPVITGDVHPLPRYVMNYLKLLADYSDAMDSLLEISEEALYHFKNDLGGDESQLEALSPLGRQILLLMSELEHNLEEKSKLYEDHALQQVFLMNNLHYLVRKVKDSDLIEVLGDNWVRKRRGQVRQYATGYLRACWSKALACLRDEGVGGSSNNASRMALKERFKNFNACFEDIYRVQTAWKVPDDQLREEMRINISEKVIPAYRSFMGRFSGQLEGRHAGKYIKYVPEDLETYLLDLFEGSPAVLHHIRRKST*