Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0146670 | XP_003589343.2 | 96.573 | 496 | 17 | 0 | 1 | 496 | 1 | 496 | 0.0 | 973 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0146670 | sp|Q851Q6|OBGC2_ORYSJ | 60.254 | 473 | 175 | 5 | 28 | 489 | 32 | 502 | 0.0 | 550 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0146670 | G7I5V4 | 96.573 | 496 | 17 | 0 | 1 | 496 | 1 | 496 | 0.0 | 973 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003060 | Msa0146670 | 0.843510 | 1.340834e-58 | -8.615850e-47 |
| Msa0037820 | Msa0146670 | 0.824880 | 6.350407e-54 | -8.615850e-47 |
| Msa0084680 | Msa0146670 | 0.828118 | 1.073605e-54 | -8.615850e-47 |
| Msa0146670 | Msa0176710 | 0.820275 | 7.474311e-53 | -8.615850e-47 |
| Msa0146670 | Msa0185390 | 0.802670 | 5.024805e-49 | -8.615850e-47 |
| Msa0146670 | Msa0467800 | 0.800667 | 1.294095e-48 | -8.615850e-47 |
| Msa0146670 | Msa0485280 | 0.805308 | 1.421442e-49 | -8.615850e-47 |
| Msa0146670 | Msa0583740 | 0.813279 | 2.773536e-51 | -8.615850e-47 |
| Msa0146670 | Msa0669220 | 0.801656 | 8.123497e-49 | -8.615850e-47 |
| Msa0146670 | Msa0703760 | 0.806221 | 9.137848e-50 | -8.615850e-47 |
| Msa0146670 | Msa1177240 | 0.817034 | 4.064784e-52 | -8.615850e-47 |
| Msa0146670 | Msa1361910 | 0.800606 | 1.332111e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0146670 | MtrunA17_Chr1g0155741 | 96.573 | 496 | 17 | 0 | 1 | 496 | 1 | 496 | 0.0 | 973 |
| Msa0146670 | MtrunA17_Chr2g0286181 | 36.842 | 285 | 153 | 5 | 136 | 419 | 203 | 461 | 8.05e-52 | 185 |
| Msa0146670 | MtrunA17_Chr1g0186011 | 41.784 | 213 | 102 | 5 | 202 | 400 | 250 | 454 | 5.11e-38 | 145 |
| Msa0146670 | MtrunA17_Chr2g0292511 | 32.117 | 137 | 74 | 3 | 272 | 389 | 27 | 163 | 6.15e-16 | 79.7 |
| Msa0146670 | MtrunA17_Chr8g0358201 | 36.111 | 108 | 59 | 3 | 273 | 370 | 53 | 160 | 2.99e-12 | 68.6 |
| Msa0146670 | MtrunA17_Chr3g0129261 | 37.069 | 116 | 59 | 3 | 270 | 383 | 65 | 168 | 1.41e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0146670 | AT5G18570.1 | 35.328 | 351 | 184 | 6 | 69 | 417 | 209 | 518 | 1.28e-47 | 175 |
| Msa0146670 | AT1G07615.1 | 38.793 | 232 | 116 | 4 | 202 | 415 | 225 | 448 | 2.98e-37 | 143 |
| Msa0146670 | AT1G30580.1 | 33.824 | 136 | 71 | 3 | 272 | 388 | 27 | 162 | 5.06e-16 | 80.5 |
| Msa0146670 | AT4G39520.1 | 36.842 | 114 | 58 | 3 | 272 | 383 | 68 | 169 | 4.51e-11 | 65.1 |
Find 149 sgRNAs with CRISPR-Local
Find 388 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGCATTAATGTTGTAAA+TGG | 0.168245 | 1_4:+6371225 | None:intergenic |
| GGCAAAGACTACTCATAATT+TGG | 0.185429 | 1_4:-6369272 | Msa0146670:three_prime_UTR |
| CCACGACCTCACTCTGTTAT+TGG | 0.196696 | 1_4:-6369610 | Msa0146670:CDS |
| GTTCGTATTCCTGTTCCTTT+AGG | 0.240911 | 1_4:-6374299 | Msa0146670:intron |
| TTCTATCAAAATTCAGATAA+TGG | 0.243688 | 1_4:-6374867 | Msa0146670:exon |
| TTATTGGAAAAGCGCGTTTC+GGG | 0.247186 | 1_4:+6374797 | None:intergenic |
| TGGTAGTTGCGTAGGGTTTA+AGG | 0.250524 | 1_4:+6374697 | None:intergenic |
| ACAGTTCTGTAGTCATTTAC+AGG | 0.252618 | 1_4:+6370926 | None:intergenic |
| AGGAGATAAGGGCCGCTTTA+AGG | 0.264646 | 1_4:-6369392 | Msa0146670:CDS |
| TAGAAATGCCACGGCATAAT+AGG | 0.302506 | 1_4:-6372402 | Msa0146670:CDS |
| CTACCATTTCATGGAATTAC+AGG | 0.304011 | 1_4:+6368921 | None:intergenic |
| AAATGGATAATCAGCAATAT+CGG | 0.307095 | 1_4:+6371242 | None:intergenic |
| TTGTTATTCGTTTGTGTTGT+TGG | 0.323888 | 1_4:+6374738 | None:intergenic |
| ACTCAAGAAATTATGAGAAT+TGG | 0.328796 | 1_4:-6369733 | Msa0146670:CDS |
| TTGCAGTTCAACGGCGCTTT+CGG | 0.329503 | 1_4:-6369293 | Msa0146670:three_prime_UTR |
| TGTAATGTAGATTGCTAATA+TGG | 0.332397 | 1_4:-6368873 | Msa0146670:three_prime_UTR |
| ATTATTGGAAAAGCGCGTTT+CGG | 0.340664 | 1_4:+6374796 | None:intergenic |
| CCATCAAGGCGTCCAAGATT+TGG | 0.342473 | 1_4:+6371207 | None:intergenic |
| GAAACTTCAGAGCTTGGTTT+TGG | 0.342930 | 1_4:+6369688 | None:intergenic |
| AGCGTTGATTTCCCAGCATT+TGG | 0.349531 | 1_4:+6371291 | None:intergenic |
| ACTAAACCAAAACCCCAAAA+AGG | 0.352245 | 1_4:-6374585 | Msa0146670:CDS |
| ACAACATTAATGCCAAATCT+TGG | 0.357348 | 1_4:-6371219 | Msa0146670:CDS |
| TGCTGGGAAATCAACGCTTC+TGG | 0.366085 | 1_4:-6371286 | Msa0146670:CDS |
| GACTACTCATAATTTGGTTC+GGG | 0.371971 | 1_4:-6369266 | Msa0146670:three_prime_UTR |
| TGAAGGAAAAGATACGTTAT+TGG | 0.376575 | 1_4:-6374423 | Msa0146670:CDS |
| AAAACCAAGCTCTGAAGTTT+CGG | 0.377456 | 1_4:-6369686 | Msa0146670:CDS |
| CATGGTTAGCGAGATGTTAA+AGG | 0.379680 | 1_4:-6369412 | Msa0146670:CDS |
| CACGAACGGTGATGATTACT+TGG | 0.395278 | 1_4:+6374633 | None:intergenic |
| CCAAATCTTGGACGCCTTGA+TGG | 0.397530 | 1_4:-6371207 | Msa0146670:CDS |
| GATTTGCCTGGTCTTATAGA+AGG | 0.401210 | 1_4:-6371135 | Msa0146670:CDS |
| AAGTTGAAGGAAGTGATTAT+TGG | 0.401545 | 1_4:+6374781 | None:intergenic |
| TGGAGTTTCATAGTAAGAAT+AGG | 0.401600 | 1_4:-6374403 | Msa0146670:CDS |
| AGACTACTCATAATTTGGTT+CGG | 0.403363 | 1_4:-6369267 | Msa0146670:three_prime_UTR |
| CACAGTTGTGAAAAGCAAAC+GGG | 0.420716 | 1_4:-6372848 | Msa0146670:CDS |
| ACAACTATTGATCCATGAAT+AGG | 0.424559 | 1_4:+6368893 | None:intergenic |
| TACATCCCTGCTCCCAAGTT+GGG | 0.426129 | 1_4:+6371180 | None:intergenic |
| CTTGCTCGCAACAAAATCTA+AGG | 0.429097 | 1_4:+6369143 | None:intergenic |
| ACTAGAAACCAACGGTTCCT+TGG | 0.430294 | 1_4:+6369356 | None:intergenic |
| TTGTAGGGACTTCCAAATGC+TGG | 0.444567 | 1_4:-6371303 | Msa0146670:intron |
| ATACCTGTAATTCCATGAAA+TGG | 0.450583 | 1_4:-6368924 | Msa0146670:three_prime_UTR |
| GGTGATCCCAACTTGGGAGC+AGG | 0.459574 | 1_4:-6371186 | Msa0146670:CDS |
| CGAGATGTTAAAGGAGATAA+GGG | 0.460007 | 1_4:-6369403 | Msa0146670:CDS |
| GCAAACAAACCTAAAGGAAC+AGG | 0.461494 | 1_4:+6374290 | None:intergenic |
| TAGGCGTCGCTACCATTTCA+TGG | 0.462550 | 1_4:+6368912 | None:intergenic |
| ATGGTAGCGACGCCTATTCA+TGG | 0.462971 | 1_4:-6368905 | Msa0146670:three_prime_UTR |
| CCTTGATGGTGATCCCAACT+TGG | 0.465028 | 1_4:-6371193 | Msa0146670:CDS |
| TGAGCCGAAACTTCAGAGCT+TGG | 0.472376 | 1_4:+6369682 | None:intergenic |
| GCTACATTGGCAGATTTGCC+TGG | 0.472873 | 1_4:-6371147 | Msa0146670:CDS |
| TCTAAGAAGGACCCGGCTAC+TGG | 0.473999 | 1_4:-6370978 | Msa0146670:CDS |
| CAACAATGTATGGTCGTTCA+AGG | 0.478983 | 1_4:+6370100 | None:intergenic |
| GTGCAAAATTCAATATTCAA+TGG | 0.482082 | 1_4:+6369012 | None:intergenic |
| ATCGGGTTTCGCAAGCGTAA+TGG | 0.482247 | 1_4:+6371260 | None:intergenic |
| TATTCAAAAGCTAAATAACT+TGG | 0.482490 | 1_4:+6368944 | None:intergenic |
| GCACAGTTGTGAAAAGCAAA+CGG | 0.484997 | 1_4:-6372849 | Msa0146670:CDS |
| GTTGATGGTGGTAGTTGCGT+AGG | 0.485221 | 1_4:+6374689 | None:intergenic |
| CGCAACAAAATCTAAGGTCC+AGG | 0.486042 | 1_4:+6369149 | None:intergenic |
| AACAACATGGACCAGTAGCC+GGG | 0.486773 | 1_4:+6370967 | None:intergenic |
| TTATTCAAAACAACAATGTA+TGG | 0.487346 | 1_4:+6370090 | None:intergenic |
| GATGAGAGATGACTCGGATA+AGG | 0.487403 | 1_4:-6372350 | Msa0146670:intron |
| TCTTATAGAAGGTGCCCACT+TGG | 0.488521 | 1_4:-6371124 | Msa0146670:CDS |
| GCAAGTGTTTGACAAAGTAT+AGG | 0.489689 | 1_4:+6369312 | None:intergenic |
| ATCAAGTGATAGTCCAATCC+TGG | 0.490554 | 1_4:-6369167 | Msa0146670:three_prime_UTR |
| GCGAGATGTTAAAGGAGATA+AGG | 0.492991 | 1_4:-6369404 | Msa0146670:CDS |
| ATAATTTCTTGAGTCAATGT+TGG | 0.494238 | 1_4:+6369742 | None:intergenic |
| TCAGTTGTTGTAAATTGTAT+CGG | 0.494316 | 1_4:-6369095 | Msa0146670:three_prime_UTR |
| CGCAACAAGAACTTCATCAC+CGG | 0.498936 | 1_4:+6372798 | None:intergenic |
| ACCTGGGGAGGAAGTTAAGT+TGG | 0.499431 | 1_4:-6371761 | Msa0146670:CDS |
| GTCAAACACTTGCAGTTCAA+CGG | 0.499801 | 1_4:-6369302 | Msa0146670:three_prime_UTR |
| TTTACTTCTTACTTGAGGAA+TGG | 0.500469 | 1_4:-6374338 | Msa0146670:CDS |
| TGGAATTTGAAGGTTCTTTG+TGG | 0.501116 | 1_4:+6374758 | None:intergenic |
| AGGTTCTTTGTGGAAGTTGA+AGG | 0.502082 | 1_4:+6374768 | None:intergenic |
| AAGGCAGTGCGTTGATTCCA+AGG | 0.513530 | 1_4:-6369373 | Msa0146670:CDS |
| TGGGTCTTTGATACTTCCAA+TGG | 0.513837 | 1_4:-6374480 | Msa0146670:CDS |
| CGTTGATTCCAAGGAACCGT+TGG | 0.514117 | 1_4:-6369364 | Msa0146670:CDS |
| GTGATTATTTATGCTGATGA+AGG | 0.516366 | 1_4:-6374440 | Msa0146670:CDS |
| GTTGCGAGGGGTGGACAAGG+AGG | 0.518059 | 1_4:-6372781 | Msa0146670:CDS |
| TTTGTGTTGTTGGAATTTGA+AGG | 0.519213 | 1_4:+6374748 | None:intergenic |
| TTGCGAGGGGTGGACAAGGA+GGG | 0.520295 | 1_4:-6372780 | Msa0146670:CDS |
| AATGGATAATCAGCAATATC+GGG | 0.521649 | 1_4:+6371243 | None:intergenic |
| CAAGTAATCATCACCGTTCG+TGG | 0.521768 | 1_4:-6374632 | Msa0146670:CDS |
| ATACTTCCAATGGGTGGTCA+TGG | 0.522317 | 1_4:-6374470 | Msa0146670:CDS |
| GTGATGAAGTTCTTGTTGCG+AGG | 0.528670 | 1_4:-6372795 | Msa0146670:CDS |
| CAGTTCTGTAGTCATTTACA+GGG | 0.534642 | 1_4:+6370927 | None:intergenic |
| CAAAATCTAAGGTCCAGGAT+TGG | 0.540980 | 1_4:+6369154 | None:intergenic |
| TTTGGTTCATGGTCAACCTG+GGG | 0.544159 | 1_4:-6371776 | Msa0146670:CDS |
| ATACATCCCTGCTCCCAAGT+TGG | 0.545507 | 1_4:+6371179 | None:intergenic |
| TGTAGGGACTTCCAAATGCT+GGG | 0.545787 | 1_4:-6371302 | Msa0146670:intron |
| TTATTGCAGAAAGCGTATCA+TGG | 0.546103 | 1_4:-6369430 | Msa0146670:intron |
| CAACAACATGGACCAGTAGC+CGG | 0.547834 | 1_4:+6370966 | None:intergenic |
| TGCGAGGGGTGGACAAGGAG+GGG | 0.550722 | 1_4:-6372779 | Msa0146670:intron |
| CCAATAACAGAGTGAGGTCG+TGG | 0.551059 | 1_4:+6369610 | None:intergenic |
| ATCACCGTTCGTGGCGGAGA+CGG | 0.553180 | 1_4:-6374623 | Msa0146670:CDS |
| GTGATCCCAACTTGGGAGCA+GGG | 0.553268 | 1_4:-6371185 | Msa0146670:CDS |
| TCCAACTTAACTTCCTCCCC+AGG | 0.554908 | 1_4:+6371760 | None:intergenic |
| CTTGTTGCGAGGGGTGGACA+AGG | 0.554974 | 1_4:-6372784 | Msa0146670:CDS |
| TGATGAAGTTCTTGTTGCGA+GGG | 0.555435 | 1_4:-6372794 | Msa0146670:CDS |
| GGGTCTTTGATACTTCCAAT+GGG | 0.556011 | 1_4:-6374479 | Msa0146670:CDS |
| AAGTTAAATGAGAGAAATGA+AGG | 0.556816 | 1_4:+6374821 | None:intergenic |
| TTGATGGTGGTAGTTGCGTA+GGG | 0.558642 | 1_4:+6374690 | None:intergenic |
| CTTATAGAAGGTGCCCACTT+GGG | 0.558746 | 1_4:-6371123 | Msa0146670:CDS |
| CGTGGCGGAGACGGTGGTCA+CGG | 0.559725 | 1_4:-6374614 | Msa0146670:CDS |
| CAGTAGATGCGTCAACAACA+TGG | 0.566647 | 1_4:+6370954 | None:intergenic |
| TCACCACCATGACCACCCAT+TGG | 0.575301 | 1_4:+6374464 | None:intergenic |
| GGAACAGGAATACGAACAGT+AGG | 0.577522 | 1_4:+6374305 | None:intergenic |
| CTACGAGTTGTAGCCGACGT+TGG | 0.577677 | 1_4:-6371730 | Msa0146670:CDS |
| GTATTCGTCTGAAGCTACAT+TGG | 0.579587 | 1_4:-6371160 | Msa0146670:CDS |
| CCAAGTTGGGATCACCATCA+AGG | 0.581733 | 1_4:+6371193 | None:intergenic |
| ATTATGAGAATTGGCAGCGA+TGG | 0.582383 | 1_4:-6369724 | Msa0146670:CDS |
| GGTTCATGGTCAACCTGGGG+AGG | 0.582643 | 1_4:-6371773 | Msa0146670:CDS |
| GACTGAAGAAAGTGACCCAA+AGG | 0.583497 | 1_4:-6369653 | Msa0146670:CDS |
| TGAGGCATCTAAGAAGGACC+CGG | 0.584490 | 1_4:-6370985 | Msa0146670:CDS |
| TATGGTCGTTCAAGGTACTC+AGG | 0.585659 | 1_4:+6370108 | None:intergenic |
| GGTGGTAATGTTGATGCTGT+TGG | 0.588083 | 1_4:-6374365 | Msa0146670:CDS |
| TATTGATACCTTTCCCAAGT+GGG | 0.590045 | 1_4:+6371110 | None:intergenic |
| AGAAGGTGCCCACTTGGGAA+AGG | 0.591277 | 1_4:-6371118 | Msa0146670:intron |
| GAAGTTCTTGTTGCGAGGGG+TGG | 0.596690 | 1_4:-6372790 | Msa0146670:CDS |
| CTTGATGGTGATCCCAACTT+GGG | 0.597546 | 1_4:-6371192 | Msa0146670:CDS |
| CGTTGGTTTCTAGTGTGCCA+CGG | 0.598035 | 1_4:-6369347 | Msa0146670:CDS |
| ACCACCGTCTCCGCCACGAA+CGG | 0.600216 | 1_4:+6374619 | None:intergenic |
| GGAAACTACATACCTCTGGC+AGG | 0.603249 | 1_4:+6370061 | None:intergenic |
| TTAGTTTGTTAGAAATGCCA+CGG | 0.611929 | 1_4:-6372411 | Msa0146670:CDS |
| ACCGTTCGTGGCGGAGACGG+TGG | 0.613535 | 1_4:-6374620 | Msa0146670:CDS |
| TCTTTGATACTTCCAATGGG+TGG | 0.614114 | 1_4:-6374476 | Msa0146670:CDS |
| TTTGTTAAGGCTGTTGATGG+TGG | 0.622985 | 1_4:+6374677 | None:intergenic |
| CTTCCAATGGGTGGTCATGG+TGG | 0.633367 | 1_4:-6374467 | Msa0146670:CDS |
| TAACATGATGAGAGATGACT+CGG | 0.639908 | 1_4:-6372356 | Msa0146670:CDS |
| TGGGCACCTTCTATAAGACC+AGG | 0.641306 | 1_4:+6371129 | None:intergenic |
| ATCAACGCACTGCCTTAAAG+CGG | 0.642286 | 1_4:+6369380 | None:intergenic |
| GCAACAAGAACTTCATCACC+GGG | 0.643404 | 1_4:+6372799 | None:intergenic |
| AATGAGAGAAATGAAGGTGG+TGG | 0.643964 | 1_4:+6374827 | None:intergenic |
| ACTTGGTCGAAGAATTTGTG+AGG | 0.646457 | 1_4:+6374650 | None:intergenic |
| GAATAAGATTGACCTGCCAG+AGG | 0.647898 | 1_4:-6370073 | Msa0146670:intron |
| TTAGCTGATTTAGCACGACC+CGG | 0.647936 | 1_4:-6372817 | Msa0146670:CDS |
| ATTGATATATTCTTAAGACA+AGG | 0.654996 | 1_4:-6369047 | Msa0146670:three_prime_UTR |
| AGGTTTAATGCGAAACGTGG+TGG | 0.659737 | 1_4:-6374383 | Msa0146670:CDS |
| GTAATCATCACCGTTCGTGG+CGG | 0.663242 | 1_4:-6374629 | Msa0146670:CDS |
| CAACGTCGGCTACAACTCGT+AGG | 0.664807 | 1_4:+6371731 | None:intergenic |
| CTAACTCCAATAACAGAGTG+AGG | 0.666857 | 1_4:+6369604 | None:intergenic |
| TTATTGATACCTTTCCCAAG+TGG | 0.673791 | 1_4:+6371109 | None:intergenic |
| AATAGGTTTAATGCGAAACG+TGG | 0.677121 | 1_4:-6374386 | Msa0146670:CDS |
| AGGCAAGACAAACTTAACAA+TGG | 0.680073 | 1_4:+6368982 | None:intergenic |
| TTAAATGAGAGAAATGAAGG+TGG | 0.681222 | 1_4:+6374824 | None:intergenic |
| ACTTACAATTAAACCAACGT+CGG | 0.682305 | 1_4:+6371717 | None:intergenic |
| CGTGGCACACTAGAAACCAA+CGG | 0.690574 | 1_4:+6369348 | None:intergenic |
| ACTAATGTGATGTCAAACGT+CGG | 0.693967 | 1_4:-6369197 | Msa0146670:three_prime_UTR |
| GATGAAGTTCTTGTTGCGAG+GGG | 0.705915 | 1_4:-6372793 | Msa0146670:CDS |
| ACAGTTGTGAAAAGCAAACG+GGG | 0.706082 | 1_4:-6372847 | Msa0146670:CDS |
| CCCAAAGGAAAAGAAACTTG+AGG | 0.715840 | 1_4:-6369638 | Msa0146670:CDS |
| ATAGGATGCAAATCTCACCG+TGG | 0.830290 | 1_4:+6369330 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTCATTTTTTGATGTTA+TGG | - | chr1_4:6369489-6369508 | Msa0146670:intron | 15.0% |
| !!! | AATGTTGTTATGTTTTTATT+AGG | - | chr1_4:6369761-6369780 | Msa0146670:intron | 15.0% |
| !!! | ATGTTGTTATGTTTTTATTA+GGG | - | chr1_4:6369762-6369781 | Msa0146670:intron | 15.0% |
| !! | ATTATGTTTGATTAATTGAT+TGG | - | chr1_4:6369796-6369815 | Msa0146670:intron | 15.0% |
| !! | AATAATATCATATAAGATGT+TGG | + | chr1_4:6370035-6370054 | None:intergenic | 15.0% |
| !!! | TTATATTAGTTGACTTTTTT+TGG | + | chr1_4:6370314-6370333 | None:intergenic | 15.0% |
| !!! | AATCAAGTTTAGTTTTTTAT+GGG | + | chr1_4:6370855-6370874 | None:intergenic | 15.0% |
| !!! | AAATCAAGTTTAGTTTTTTA+TGG | + | chr1_4:6370856-6370875 | None:intergenic | 15.0% |
| !! | ATAAATAAATTCATACTCAT+TGG | - | chr1_4:6371168-6371187 | Msa0146670:CDS | 15.0% |
| !!! | GTCTAAATCTTTTTTTAATA+TGG | - | chr1_4:6372303-6372322 | Msa0146670:intron | 15.0% |
| !!! | ATGATTTTTTTTAATCTTTC+AGG | - | chr1_4:6372729-6372748 | Msa0146670:intron | 15.0% |
| !!! | TGATTTTTTTTAATCTTTCA+GGG | - | chr1_4:6372730-6372749 | Msa0146670:intron | 15.0% |
| !! | TTGCTTCTTAAAAAAAATAA+TGG | + | chr1_4:6372959-6372978 | None:intergenic | 15.0% |
| !!! | ATTTTTTAACTTCATATCAA+TGG | + | chr1_4:6373250-6373269 | None:intergenic | 15.0% |
| !! | AAACTTGATTAAAAATTCAA+CGG | + | chr1_4:6373323-6373342 | None:intergenic | 15.0% |
| !!! | AATTTCCTATTATTTTGTAA+AGG | - | chr1_4:6373754-6373773 | Msa0146670:intron | 15.0% |
| !!! | ATTTCCTATTATTTTGTAAA+GGG | - | chr1_4:6373755-6373774 | Msa0146670:intron | 15.0% |
| !!! | TGTTCATTAATTTTAATTTC+AGG | - | chr1_4:6373976-6373995 | Msa0146670:intron | 15.0% |
| !! | TTCTATCAAAATTCAGATAA+TGG | - | chr1_4:6368888-6368907 | Msa0146670:three_prime_UTR | 20.0% |
| !! | TTTATTCGTAAGTACAAAAA+TGG | + | chr1_4:6370141-6370160 | None:intergenic | 20.0% |
| !!! | ATGTCTTTTCATATTTTAAC+TGG | - | chr1_4:6370458-6370477 | Msa0146670:intron | 20.0% |
| !! | TCAAATAATAAACTCAATGA+GGG | + | chr1_4:6370879-6370898 | None:intergenic | 20.0% |
| !! | TTCAAATAATAAACTCAATG+AGG | + | chr1_4:6370880-6370899 | None:intergenic | 20.0% |
| !! | GAGTTTATTATTTGAATTAC+AGG | - | chr1_4:6370884-6370903 | Msa0146670:intron | 20.0% |
| !!! | ATTTCATATTCAGTTTTATC+AGG | - | chr1_4:6371685-6371704 | Msa0146670:intron | 20.0% |
| !!! | GTTTTATCTTACATTAAGAT+AGG | + | chr1_4:6371807-6371826 | None:intergenic | 20.0% |
| !!! | AAGATACATTTTAAAATGAC+AGG | + | chr1_4:6371831-6371850 | None:intergenic | 20.0% |
| !!! | GTTTTATCTTACATTAAGAT+AGG | + | chr1_4:6371807-6371826 | None:intergenic | 20.0% |
| !!! | CTGTAACAATTTTAAAATAC+AGG | + | chr1_4:6371957-6371976 | None:intergenic | 20.0% |
| !!! | CTGTATTTTAAAATTGTTAC+AGG | - | chr1_4:6371955-6371974 | Msa0146670:intron | 20.0% |
| !!! | TTTAAAATTGTTACAGGTTT+TGG | - | chr1_4:6371961-6371980 | Msa0146670:intron | 20.0% |
| !! | AATCTCAAAATTATCATCAT+TGG | + | chr1_4:6372175-6372194 | None:intergenic | 20.0% |
| !!! | ATGATAATTTTGAGATTTCT+GGG | - | chr1_4:6372178-6372197 | Msa0146670:intron | 20.0% |
| !! | TTAATATGGTGAACTAAAAT+TGG | - | chr1_4:6372317-6372336 | Msa0146670:intron | 20.0% |
| !! | ATATTTAATAAGCAGCTATA+TGG | + | chr1_4:6372711-6372730 | None:intergenic | 20.0% |
| !!! | TTTAGATTCAAGTTTTTTCT+TGG | - | chr1_4:6372881-6372900 | Msa0146670:intron | 20.0% |
| !!! | AAAAATAATGGAGTCTATAA+GGG | + | chr1_4:6372947-6372966 | None:intergenic | 20.0% |
| !!! | AAAAAATAATGGAGTCTATA+AGG | + | chr1_4:6372948-6372967 | None:intergenic | 20.0% |
| !! | ATGCAATCTATAAGATTATT+CGG | + | chr1_4:6373149-6373168 | None:intergenic | 20.0% |
| !! | TAAATTATCAGAGCTAATAA+AGG | + | chr1_4:6373385-6373404 | None:intergenic | 20.0% |
| !! | ATTGTGCATAAAATAATTTG+TGG | - | chr1_4:6373529-6373548 | Msa0146670:intron | 20.0% |
| !! | TTATTCAAAACAACAATGTA+TGG | + | chr1_4:6373668-6373687 | None:intergenic | 20.0% |
| !! | CATATTACAAGATAGTAATA+CGG | + | chr1_4:6373931-6373950 | None:intergenic | 20.0% |
| !!! | TTAATTTTAATTTCAGGTTG+AGG | - | chr1_4:6373982-6374001 | Msa0146670:intron | 20.0% |
| !! | ATTGATATATTCTTAAGACA+AGG | - | chr1_4:6374708-6374727 | Msa0146670:CDS | 20.0% |
| !! | TATTCAAAAGCTAAATAACT+TGG | + | chr1_4:6374814-6374833 | None:intergenic | 20.0% |
| ! | AAGTTAAATGAGAGAAATGA+AGG | + | chr1_4:6368937-6368956 | None:intergenic | 25.0% |
| !!! | GTTTTTCAATTTCCTTTTTG+GGG | + | chr1_4:6369185-6369204 | None:intergenic | 25.0% |
| !!! | GGTTTTTCAATTTCCTTTTT+GGG | + | chr1_4:6369186-6369205 | None:intergenic | 25.0% |
| !!! | TGGTTTTTCAATTTCCTTTT+TGG | + | chr1_4:6369187-6369206 | None:intergenic | 25.0% |
| !!! | GCTTTTTTCGTTTTTGATTT+TGG | + | chr1_4:6369207-6369226 | None:intergenic | 25.0% |
| ! | AAATTTGCAAACAAACCTAA+AGG | + | chr1_4:6369474-6369493 | None:intergenic | 25.0% |
| !!! | AAGCTATTTTTGATAACTTG+TGG | - | chr1_4:6369566-6369585 | Msa0146670:intron | 25.0% |
| !!! | TTTTTGATAACTTGTGGTTT+TGG | - | chr1_4:6369572-6369591 | Msa0146670:intron | 25.0% |
| ! | TTATAAGTTCTTCCAATTAG+TGG | - | chr1_4:6369637-6369656 | Msa0146670:CDS | 25.0% |
| ! | GATATATAGACTGTCTAAAT+CGG | + | chr1_4:6369702-6369721 | None:intergenic | 25.0% |
| ! | GATTTACATTGTAATGTTAG+AGG | - | chr1_4:6369850-6369869 | Msa0146670:intron | 25.0% |
| ! | ATGTGGATAAGATTAGAATA+AGG | - | chr1_4:6370113-6370132 | Msa0146670:CDS | 25.0% |
| ! | TCTAAGCTATACTATACTTA+CGG | + | chr1_4:6370181-6370200 | None:intergenic | 25.0% |
| ! | TAAGTATAGTATAGCTTAGA+TGG | - | chr1_4:6370181-6370200 | Msa0146670:intron | 25.0% |
| !!! | ATAATAAGTACTGAAAAGTG+GGG | + | chr1_4:6370261-6370280 | None:intergenic | 25.0% |
| !!! | CATAATAAGTACTGAAAAGT+GGG | + | chr1_4:6370262-6370281 | None:intergenic | 25.0% |
| !!! | ACATAATAAGTACTGAAAAG+TGG | + | chr1_4:6370263-6370282 | None:intergenic | 25.0% |
| !!! | CAATGTTTTAAAAACTGAAC+TGG | - | chr1_4:6370343-6370362 | Msa0146670:intron | 25.0% |
| !!! | AGTTTTAAAAACATTGGTCA+TGG | - | chr1_4:6370497-6370516 | Msa0146670:intron | 25.0% |
| ! | GTAAGATAGAATTTAACTGA+TGG | + | chr1_4:6370660-6370679 | None:intergenic | 25.0% |
| ! | TAAATTCTATCTTACCACTT+TGG | - | chr1_4:6370665-6370684 | Msa0146670:intron | 25.0% |
| ! | ACAAAATTACTAACCATACA+TGG | + | chr1_4:6370691-6370710 | None:intergenic | 25.0% |
| ! | CAGAAAATGAAATGAAAACA+AGG | + | chr1_4:6370781-6370800 | None:intergenic | 25.0% |
| ! | ACAACAATAATAACCAAGAT+AGG | + | chr1_4:6371285-6371304 | None:intergenic | 25.0% |
| ! | GAAATTTGGTTGATCAATTA+TGG | + | chr1_4:6371594-6371613 | None:intergenic | 25.0% |
| !!! | AAGTATTTTGGACAGAAATT+TGG | + | chr1_4:6371608-6371627 | None:intergenic | 25.0% |
| !! | TGACAAATTAGCAAGTATTT+TGG | + | chr1_4:6371620-6371639 | None:intergenic | 25.0% |
| ! | TGTTCAAAAACTATTGTTTC+TGG | + | chr1_4:6371732-6371751 | None:intergenic | 25.0% |
| ! | TTACATTAAGATAGGAACAA+AGG | + | chr1_4:6371799-6371818 | None:intergenic | 25.0% |
| !!! | TGTTCTAAAACTATTGTTTC+TGG | + | chr1_4:6371858-6371877 | None:intergenic | 25.0% |
| ! | TTACATTAAGATAGGAACAA+AGG | + | chr1_4:6371799-6371818 | None:intergenic | 25.0% |
| ! | AACAAACAGAGAACTAAATA+AGG | + | chr1_4:6372083-6372102 | None:intergenic | 25.0% |
| ! | ATCTTCATAATAAATAACCG+TGG | - | chr1_4:6372113-6372132 | Msa0146670:intron | 25.0% |
| !!! | GATGATAATTTTGAGATTTC+TGG | - | chr1_4:6372177-6372196 | Msa0146670:intron | 25.0% |
| ! | AATTTCACTTGGACAAAAAA+CGG | + | chr1_4:6372350-6372369 | None:intergenic | 25.0% |
| !! | ATGAAGTTAATCTTGTTGTA+GGG | - | chr1_4:6372437-6372456 | Msa0146670:intron | 25.0% |
| ! | AAATGGATAATCAGCAATAT+CGG | + | chr1_4:6372516-6372535 | None:intergenic | 25.0% |
| ! | TTTGGCATTAATGTTGTAAA+TGG | + | chr1_4:6372533-6372552 | None:intergenic | 25.0% |
| !!! | AAGTTTTTTCTTGGTTTAAC+AGG | - | chr1_4:6372890-6372909 | Msa0146670:intron | 25.0% |
| ! | AAAGTGAAATATCCCTTTAA+AGG | + | chr1_4:6373203-6373222 | None:intergenic | 25.0% |
| ! | AAAGAACAAACAGCAAATTT+GGG | + | chr1_4:6373432-6373451 | None:intergenic | 25.0% |
| ! | TTAAAAACTCCAAAACATGA+GGG | + | chr1_4:6373574-6373593 | None:intergenic | 25.0% |
| ! | ATTAAAAACTCCAAAACATG+AGG | + | chr1_4:6373575-6373594 | None:intergenic | 25.0% |
| ! | ATAATTTCTTGAGTCAATGT+TGG | + | chr1_4:6374016-6374035 | None:intergenic | 25.0% |
| ! | ACTCAAGAAATTATGAGAAT+TGG | - | chr1_4:6374022-6374041 | Msa0146670:intron | 25.0% |
| ! | TCAGTTGTTGTAAATTGTAT+CGG | - | chr1_4:6374660-6374679 | Msa0146670:CDS | 25.0% |
| ! | GTGCAAAATTCAATATTCAA+TGG | + | chr1_4:6374746-6374765 | None:intergenic | 25.0% |
| ! | TGTAATGTAGATTGCTAATA+TGG | - | chr1_4:6374882-6374901 | Msa0146670:five_prime_UTR | 25.0% |
| TTAAATGAGAGAAATGAAGG+TGG | + | chr1_4:6368934-6368953 | None:intergenic | 30.0% | |
| AAGTTGAAGGAAGTGATTAT+TGG | + | chr1_4:6368977-6368996 | None:intergenic | 30.0% | |
| ! | TTTGTGTTGTTGGAATTTGA+AGG | + | chr1_4:6369010-6369029 | None:intergenic | 30.0% |
| ! | TTGTTATTCGTTTGTGTTGT+TGG | + | chr1_4:6369020-6369039 | None:intergenic | 30.0% |
| ! | TTTGTGAGGTTCTTTTGTTA+AGG | + | chr1_4:6369094-6369113 | None:intergenic | 30.0% |
| GTGATTATTTATGCTGATGA+AGG | - | chr1_4:6369315-6369334 | Msa0146670:three_prime_UTR | 30.0% | |
| TGAAGGAAAAGATACGTTAT+TGG | - | chr1_4:6369332-6369351 | Msa0146670:exon | 30.0% | |
| TGGAGTTTCATAGTAAGAAT+AGG | - | chr1_4:6369352-6369371 | Msa0146670:CDS | 30.0% | |
| !! | GTGTTTTTACTTCTTACTTG+AGG | - | chr1_4:6369412-6369431 | Msa0146670:CDS | 30.0% |
| TTTACTTCTTACTTGAGGAA+TGG | - | chr1_4:6369417-6369436 | Msa0146670:CDS | 30.0% | |
| !!! | GTTTTTGAGTTCATCATAGT+TGG | - | chr1_4:6369821-6369840 | Msa0146670:intron | 30.0% |
| CATTGTAATGTTAGAGGATT+TGG | - | chr1_4:6369856-6369875 | Msa0146670:intron | 30.0% | |
| !! | TCAAGTGTGTCACTTAATAT+GGG | + | chr1_4:6369902-6369921 | None:intergenic | 30.0% |
| CTAAGCTATACTATACTTAC+GGG | + | chr1_4:6370180-6370199 | None:intergenic | 30.0% | |
| AGTATAGCTTAGATGGTAAA+AGG | - | chr1_4:6370188-6370207 | Msa0146670:intron | 30.0% | |
| !! | TAATAAGTACTGAAAAGTGG+GGG | + | chr1_4:6370260-6370279 | None:intergenic | 30.0% |
| TTTGAAAAGCAGTATAAGCA+TGG | + | chr1_4:6370382-6370401 | None:intergenic | 30.0% | |
| AAAAGACATTGTTCACGATT+CGG | + | chr1_4:6370447-6370466 | None:intergenic | 30.0% | |
| !!! | TGCCTCAGTTTTAAAAACAT+TGG | - | chr1_4:6370491-6370510 | Msa0146670:intron | 30.0% |
| !!! | GACCAATGTTTTTAAAACTG+AGG | + | chr1_4:6370496-6370515 | None:intergenic | 30.0% |
| GAAGCAATTTATTCACGAAA+TGG | + | chr1_4:6370722-6370741 | None:intergenic | 30.0% | |
| TAAGTTGTACAGATTCACAT+TGG | - | chr1_4:6371104-6371123 | Msa0146670:intron | 30.0% | |
| GCATTTCTAACAAACTAATC+TGG | + | chr1_4:6371342-6371361 | None:intergenic | 30.0% | |
| !! | TTAGTTTGTTAGAAATGCCA+CGG | - | chr1_4:6371344-6371363 | Msa0146670:intron | 30.0% |
| ATTGAAGGATTGAATCAACA+AGG | - | chr1_4:6371518-6371537 | Msa0146670:intron | 30.0% | |
| TCTCTCAGTTCAATTAATGT+TGG | - | chr1_4:6371553-6371572 | Msa0146670:intron | 30.0% | |
| ACTTACAATTAAACCAACGT+CGG | + | chr1_4:6372041-6372060 | None:intergenic | 30.0% | |
| CACAATCTTCACTAAAATCA+TGG | + | chr1_4:6372224-6372243 | None:intergenic | 30.0% | |
| !! | GATTTTAGTGAAGATTGTGA+AGG | - | chr1_4:6372225-6372244 | Msa0146670:intron | 30.0% |
| ATTTCACTTGGACAAAAAAC+GGG | + | chr1_4:6372349-6372368 | None:intergenic | 30.0% | |
| ! | GATGAAGTTAATCTTGTTGT+AGG | - | chr1_4:6372436-6372455 | Msa0146670:intron | 30.0% |
| AATGGATAATCAGCAATATC+GGG | + | chr1_4:6372515-6372534 | None:intergenic | 30.0% | |
| ACAACATTAATGCCAAATCT+TGG | - | chr1_4:6372536-6372555 | Msa0146670:intron | 30.0% | |
| CAGCTATATGGTTTAAAAGA+TGG | + | chr1_4:6372699-6372718 | None:intergenic | 30.0% | |
| ! | TTTTTAATCTTTCAGGGTCT+TGG | - | chr1_4:6372736-6372755 | Msa0146670:intron | 30.0% |
| !!! | ATTTTTTGAGGCATCTAAGA+AGG | - | chr1_4:6372764-6372783 | Msa0146670:intron | 30.0% |
| ATTCTTCAACAATCAGAGAA+GGG | - | chr1_4:6373167-6373186 | Msa0146670:intron | 30.0% | |
| !! | AAAGGGATATTTCACTTTTG+AGG | - | chr1_4:6373205-6373224 | Msa0146670:intron | 30.0% |
| !!! | CAAGTTTTTAGTCAAATGCT+TGG | - | chr1_4:6373336-6373355 | Msa0146670:intron | 30.0% |
| !! | TTTTTAGTCAAATGCTTGGA+AGG | - | chr1_4:6373340-6373359 | Msa0146670:intron | 30.0% |
| ! | TTTTAGTCAAATGCTTGGAA+GGG | - | chr1_4:6373341-6373360 | Msa0146670:intron | 30.0% |
| AAGAACAAACAGCAAATTTG+GGG | + | chr1_4:6373431-6373450 | None:intergenic | 30.0% | |
| GAAAGAACAAACAGCAAATT+TGG | + | chr1_4:6373433-6373452 | None:intergenic | 30.0% | |
| ! | TTTCCTCTTTCTTTTGCTTT+TGG | - | chr1_4:6373456-6373475 | Msa0146670:intron | 30.0% |
| AATCCAAAAGCAAAAGAAAG+AGG | + | chr1_4:6373462-6373481 | None:intergenic | 30.0% | |
| ! | TTATCATTTCCCTCATGTTT+TGG | - | chr1_4:6373562-6373581 | Msa0146670:intron | 30.0% |
| ! | TCATTCTAATTCTGTTTTGC+AGG | - | chr1_4:6373607-6373626 | Msa0146670:intron | 30.0% |
| !! | TCCTATTATTTTGTAAAGGG+AGG | - | chr1_4:6373758-6373777 | Msa0146670:intron | 30.0% |
| TACAAGATAGTAATACGGAA+GGG | + | chr1_4:6373926-6373945 | None:intergenic | 30.0% | |
| TTACAAGATAGTAATACGGA+AGG | + | chr1_4:6373927-6373946 | None:intergenic | 30.0% | |
| TGTGAAATGAAATGCTATGA+AGG | + | chr1_4:6374232-6374251 | None:intergenic | 30.0% | |
| AGACTACTCATAATTTGGTT+CGG | - | chr1_4:6374488-6374507 | Msa0146670:CDS | 30.0% | |
| ! | ATATTGAATTTTGCACACTC+AGG | - | chr1_4:6374750-6374769 | Msa0146670:CDS | 30.0% |
| CTTGGAGAAAAATGAATACA+AGG | + | chr1_4:6374796-6374815 | None:intergenic | 30.0% | |
| ATACCTGTAATTCCATGAAA+TGG | - | chr1_4:6374831-6374850 | Msa0146670:CDS | 30.0% | |
| ACAACTATTGATCCATGAAT+AGG | + | chr1_4:6374865-6374884 | None:intergenic | 30.0% | |
| ! | ATTATTGGAAAAGCGCGTTT+CGG | + | chr1_4:6368962-6368981 | None:intergenic | 35.0% |
| TGGAATTTGAAGGTTCTTTG+TGG | + | chr1_4:6369000-6369019 | None:intergenic | 35.0% | |
| ! | TCTTTTGTTAAGGCTGTTGA+TGG | + | chr1_4:6369084-6369103 | None:intergenic | 35.0% |
| ACTAAACCAAAACCCCAAAA+AGG | - | chr1_4:6369170-6369189 | Msa0146670:three_prime_UTR | 35.0% | |
| !!! | CAATTTCCTTTTTGGGGTTT+TGG | + | chr1_4:6369179-6369198 | None:intergenic | 35.0% |
| !! | CGTTGAAGAGAGATTTTGAT+GGG | - | chr1_4:6369256-6369275 | Msa0146670:three_prime_UTR | 35.0% |
| AATAGGTTTAATGCGAAACG+TGG | - | chr1_4:6369369-6369388 | Msa0146670:CDS | 35.0% | |
| ! | TTTGATGTTATGGCTCTGTT+TGG | - | chr1_4:6369499-6369518 | Msa0146670:intron | 35.0% |
| ! | ATGGCTCTGTTTGGATAAAT+AGG | - | chr1_4:6369508-6369527 | Msa0146670:intron | 35.0% |
| ! | TGGCTCTGTTTGGATAAATA+GGG | - | chr1_4:6369509-6369528 | Msa0146670:intron | 35.0% |
| !! | GTCAAGTGTGTCACTTAATA+TGG | + | chr1_4:6369903-6369922 | None:intergenic | 35.0% |
| CATTGTACTCCATTCTATGT+TGG | - | chr1_4:6370088-6370107 | Msa0146670:CDS | 35.0% | |
| TCCATTCTATGTTGGAAATG+TGG | - | chr1_4:6370096-6370115 | Msa0146670:CDS | 35.0% | |
| TCCACATTTCCAACATAGAA+TGG | + | chr1_4:6370100-6370119 | None:intergenic | 35.0% | |
| ! | GCTTTTCAAATGCTAGAATC+CGG | - | chr1_4:6370392-6370411 | Msa0146670:intron | 35.0% |
| !! | GAATTGATGACAGTTTTGTC+CGG | + | chr1_4:6370414-6370433 | None:intergenic | 35.0% |
| CGGCTAGATTATGTCTTAAA+TGG | + | chr1_4:6371080-6371099 | None:intergenic | 35.0% | |
| TTAAGACATAATCTAGCCGT+AGG | - | chr1_4:6371081-6371100 | Msa0146670:intron | 35.0% | |
| GAATCTGTACAACTTACCTA+CGG | + | chr1_4:6371100-6371119 | None:intergenic | 35.0% | |
| GGTAATGTACTCTGTAACTA+AGG | - | chr1_4:6371189-6371208 | Msa0146670:CDS | 35.0% | |
| !! | TGTTGATACAGTAGTTCTGA+AGG | + | chr1_4:6371224-6371243 | None:intergenic | 35.0% |
| !! | TTCCTCGAAAGTATTAGTTG+TGG | - | chr1_4:6371253-6371272 | Msa0146670:CDS | 35.0% |
| AACCACAACTAATACTTTCG+AGG | + | chr1_4:6371258-6371277 | None:intergenic | 35.0% | |
| !!! | GTTTTTTTCCTATTATGCCG+TGG | + | chr1_4:6371364-6371383 | None:intergenic | 35.0% |
| TAACATGATGAGAGATGACT+CGG | - | chr1_4:6371399-6371418 | Msa0146670:intron | 35.0% | |
| CCTAATGAAGTCTCTAATGA+TGG | + | chr1_4:6371493-6371512 | None:intergenic | 35.0% | |
| CCATCATTAGAGACTTCATT+AGG | - | chr1_4:6371490-6371509 | Msa0146670:intron | 35.0% | |
| CTTCATTAGGCATGTATTGA+AGG | - | chr1_4:6371503-6371522 | Msa0146670:intron | 35.0% | |
| ATTAATTGAACTGAGAGAGC+AGG | + | chr1_4:6371551-6371570 | None:intergenic | 35.0% | |
| ! | TATTTCTGTCCAAATCTCTC+TGG | - | chr1_4:6371641-6371660 | Msa0146670:intron | 35.0% |
| ATCATAGTTCCAGAGAGATT+TGG | + | chr1_4:6371653-6371672 | None:intergenic | 35.0% | |
| CTAGTGTAAAGTAGATGTCA+CGG | - | chr1_4:6371763-6371782 | Msa0146670:CDS | 35.0% | |
| !!! | TTGTTACAGGTTTTGGTTCA+TGG | - | chr1_4:6371968-6371987 | Msa0146670:intron | 35.0% |
| TTTGTCCAAGTGAAATTCGT+TGG | - | chr1_4:6372353-6372372 | Msa0146670:CDS | 35.0% | |
| TATTGATACCTTTCCCAAGT+GGG | + | chr1_4:6372648-6372667 | None:intergenic | 35.0% | |
| TTATTGATACCTTTCCCAAG+TGG | + | chr1_4:6372649-6372668 | None:intergenic | 35.0% | |
| CAGTTCTGTAGTCATTTACA+GGG | + | chr1_4:6372831-6372850 | None:intergenic | 35.0% | |
| ACAGTTCTGTAGTCATTTAC+AGG | + | chr1_4:6372832-6372851 | None:intergenic | 35.0% | |
| AACAGGTTTACTTGAAGTTG+TGG | - | chr1_4:6372907-6372926 | Msa0146670:intron | 35.0% | |
| ACAGGTTTACTTGAAGTTGT+GGG | - | chr1_4:6372908-6372927 | Msa0146670:intron | 35.0% | |
| !!! | TACCTTTTGCTGTTCACTAT+TGG | + | chr1_4:6372999-6373018 | None:intergenic | 35.0% |
| !!! | TGTTGGTTTTTCTAGTCATG+GGG | + | chr1_4:6373085-6373104 | None:intergenic | 35.0% |
| !!! | GTGTTGGTTTTTCTAGTCAT+GGG | + | chr1_4:6373086-6373105 | None:intergenic | 35.0% |
| !!! | TGTGTTGGTTTTTCTAGTCA+TGG | + | chr1_4:6373087-6373106 | None:intergenic | 35.0% |
| !! | GGTACTCGTTTGATTAGTTT+GGG | + | chr1_4:6373128-6373147 | None:intergenic | 35.0% |
| CATTCTTCAACAATCAGAGA+AGG | - | chr1_4:6373166-6373185 | Msa0146670:intron | 35.0% | |
| TTCTTCAACAATCAGAGAAG+GGG | - | chr1_4:6373168-6373187 | Msa0146670:intron | 35.0% | |
| ! | GGGAATTTGGTTCCTTTAAA+GGG | - | chr1_4:6373188-6373207 | Msa0146670:intron | 35.0% |
| ACTTCATATCAATGGTTGAG+AGG | + | chr1_4:6373242-6373261 | None:intergenic | 35.0% | |
| CGGCAAACATTATGTATACA+TGG | + | chr1_4:6373303-6373322 | None:intergenic | 35.0% | |
| ! | AATTTGGGGCTATCAATAGA+TGG | + | chr1_4:6373417-6373436 | None:intergenic | 35.0% |
| !! | TTGGATTTTGAGTCAAAAGC+AGG | - | chr1_4:6373475-6373494 | Msa0146670:intron | 35.0% |
| ACATGAGGGAAATGATAAGT+TGG | + | chr1_4:6373560-6373579 | None:intergenic | 35.0% | |
| TATACCCAAACTCAGATTGA+GGG | + | chr1_4:6373728-6373747 | None:intergenic | 35.0% | |
| ATATACCCAAACTCAGATTG+AGG | + | chr1_4:6373729-6373748 | None:intergenic | 35.0% | |
| GCCTCCCTTTACAAAATAAT+AGG | + | chr1_4:6373762-6373781 | None:intergenic | 35.0% | |
| !! | AAAACCAAGCTCTGAAGTTT+CGG | - | chr1_4:6374069-6374088 | Msa0146670:intron | 35.0% |
| ! | CCTCAAGTTTCTTTTCCTTT+GGG | + | chr1_4:6374120-6374139 | None:intergenic | 35.0% |
| ! | TCCTCAAGTTTCTTTTCCTT+TGG | + | chr1_4:6374121-6374140 | None:intergenic | 35.0% |
| ! | TACTTTTCATAGTACCCAGT+CGG | - | chr1_4:6374278-6374297 | Msa0146670:intron | 35.0% |
| ! | TTATTGCAGAAAGCGTATCA+TGG | - | chr1_4:6374325-6374344 | Msa0146670:CDS | 35.0% |
| CGAGATGTTAAAGGAGATAA+GGG | - | chr1_4:6374352-6374371 | Msa0146670:CDS | 35.0% | |
| GCAAGTGTTTGACAAAGTAT+AGG | + | chr1_4:6374446-6374465 | None:intergenic | 35.0% | |
| GGCAAAGACTACTCATAATT+TGG | - | chr1_4:6374483-6374502 | Msa0146670:CDS | 35.0% | |
| ! | GACTACTCATAATTTGGTTC+GGG | - | chr1_4:6374489-6374508 | Msa0146670:CDS | 35.0% |
| ACTAATGTGATGTCAAACGT+CGG | - | chr1_4:6374558-6374577 | Msa0146670:CDS | 35.0% | |
| AGGCAAGACAAACTTAACAA+TGG | + | chr1_4:6374776-6374795 | None:intergenic | 35.0% | |
| CTACCATTTCATGGAATTAC+AGG | + | chr1_4:6374837-6374856 | None:intergenic | 35.0% | |
| AATGAGAGAAATGAAGGTGG+TGG | + | chr1_4:6368931-6368950 | None:intergenic | 40.0% | |
| ! | TTATTGGAAAAGCGCGTTTC+GGG | + | chr1_4:6368961-6368980 | None:intergenic | 40.0% |
| AGGTTCTTTGTGGAAGTTGA+AGG | + | chr1_4:6368990-6369009 | None:intergenic | 40.0% | |
| ! | TTTGTTAAGGCTGTTGATGG+TGG | + | chr1_4:6369081-6369100 | None:intergenic | 40.0% |
| ACTTGGTCGAAGAATTTGTG+AGG | + | chr1_4:6369108-6369127 | None:intergenic | 40.0% | |
| ! | GCGTTGAAGAGAGATTTTGA+TGG | - | chr1_4:6369255-6369274 | Msa0146670:three_prime_UTR | 40.0% |
| TGGGTCTTTGATACTTCCAA+TGG | - | chr1_4:6369275-6369294 | Msa0146670:three_prime_UTR | 40.0% | |
| GGGTCTTTGATACTTCCAAT+GGG | - | chr1_4:6369276-6369295 | Msa0146670:three_prime_UTR | 40.0% | |
| TCTTTGATACTTCCAATGGG+TGG | - | chr1_4:6369279-6369298 | Msa0146670:three_prime_UTR | 40.0% | |
| GTTCGTATTCCTGTTCCTTT+AGG | - | chr1_4:6369456-6369475 | Msa0146670:intron | 40.0% | |
| GCAAACAAACCTAAAGGAAC+AGG | + | chr1_4:6369468-6369487 | None:intergenic | 40.0% | |
| GCACATGTAACACCACTAAT+TGG | + | chr1_4:6369652-6369671 | None:intergenic | 40.0% | |
| !! | CTAGTGTTGCTTCTATGTGA+AGG | - | chr1_4:6369736-6369755 | Msa0146670:CDS | 40.0% |
| !! | GTGTGTCACTTAATATGGGA+CGG | + | chr1_4:6369898-6369917 | None:intergenic | 40.0% |
| TAGCTTAGATGGTAAAAGGC+TGG | - | chr1_4:6370192-6370211 | Msa0146670:intron | 40.0% | |
| TTAGATGGTAAAAGGCTGGA+GGG | - | chr1_4:6370196-6370215 | Msa0146670:intron | 40.0% | |
| TGGAGGGACATTTGATATGT+TGG | - | chr1_4:6370212-6370231 | Msa0146670:intron | 40.0% | |
| GCACAGTTGTGAAAAGCAAA+CGG | - | chr1_4:6370906-6370925 | Msa0146670:intron | 40.0% | |
| CACAGTTGTGAAAAGCAAAC+GGG | - | chr1_4:6370907-6370926 | Msa0146670:intron | 40.0% | |
| ACAGTTGTGAAAAGCAAACG+GGG | - | chr1_4:6370908-6370927 | Msa0146670:intron | 40.0% | |
| TGATGAAGTTCTTGTTGCGA+GGG | - | chr1_4:6370961-6370980 | Msa0146670:CDS | 40.0% | |
| GTTGTACAGATTCACATTGG+TGG | - | chr1_4:6371107-6371126 | Msa0146670:intron | 40.0% | |
| GTTGTGGTTTACACCTATCT+TGG | - | chr1_4:6371269-6371288 | Msa0146670:CDS | 40.0% | |
| TAGAAATGCCACGGCATAAT+AGG | - | chr1_4:6371353-6371372 | Msa0146670:intron | 40.0% | |
| !!! | TTTTGGTTCATGGTCAACCT+GGG | - | chr1_4:6371978-6371997 | Msa0146670:intron | 40.0% |
| AACCACTCATCAACATTCCA+CGG | + | chr1_4:6372133-6372152 | None:intergenic | 40.0% | |
| GAAGATTGTGAAGGATAGTG+TGG | - | chr1_4:6372234-6372253 | Msa0146670:intron | 40.0% | |
| !! | GATGTGTTCTAAAGCATGAG+TGG | - | chr1_4:6372258-6372277 | Msa0146670:intron | 40.0% |
| TACAGCCAACGAATTTCACT+TGG | + | chr1_4:6372361-6372380 | None:intergenic | 40.0% | |
| GTGAAAGACTGCTTTGTAGA+AGG | - | chr1_4:6372387-6372406 | Msa0146670:CDS | 40.0% | |
| ! | GTATTCGTCTGAAGCTACAT+TGG | - | chr1_4:6372595-6372614 | Msa0146670:intron | 40.0% |
| !! | GATTTGCCTGGTCTTATAGA+AGG | - | chr1_4:6372620-6372639 | Msa0146670:intron | 40.0% |
| !!! | GTCTTGGTCGCAATTTTTTG+AGG | - | chr1_4:6372752-6372771 | Msa0146670:intron | 40.0% |
| TACTTGAAGTTGTGGGTGTT+TGG | - | chr1_4:6372915-6372934 | Msa0146670:intron | 40.0% | |
| CACCAATAGTGAACAGCAAA+AGG | - | chr1_4:6372994-6373013 | Msa0146670:intron | 40.0% | |
| ! | TGAACAGCAAAAGGTATGCT+AGG | - | chr1_4:6373003-6373022 | Msa0146670:intron | 40.0% |
| !!! | TCTGCATTGTTTTTGCAGTG+GGG | + | chr1_4:6373044-6373063 | None:intergenic | 40.0% |
| !!! | GTCTGCATTGTTTTTGCAGT+GGG | + | chr1_4:6373045-6373064 | None:intergenic | 40.0% |
| !!! | TGTCTGCATTGTTTTTGCAG+TGG | + | chr1_4:6373046-6373065 | None:intergenic | 40.0% |
| !!! | GTTGGTTTTTCTAGTCATGG+GGG | + | chr1_4:6373084-6373103 | None:intergenic | 40.0% |
| !!! | TTGGGATTTTTTGTGCGTTG+AGG | + | chr1_4:6373110-6373129 | None:intergenic | 40.0% |
| ! | CGGTACTCGTTTGATTAGTT+TGG | + | chr1_4:6373129-6373148 | None:intergenic | 40.0% |
| ACAATCAGAGAAGGGGAATT+TGG | - | chr1_4:6373175-6373194 | Msa0146670:intron | 40.0% | |
| ! | GGGGAATTTGGTTCCTTTAA+AGG | - | chr1_4:6373187-6373206 | Msa0146670:intron | 40.0% |
| TGCTTGGAAGGGAGTTTAAT+TGG | - | chr1_4:6373352-6373371 | Msa0146670:intron | 40.0% | |
| CAACAATGTATGGTCGTTCA+AGG | + | chr1_4:6373658-6373677 | None:intergenic | 40.0% | |
| AGTAGGAAACTACATACCTC+TGG | + | chr1_4:6373701-6373720 | None:intergenic | 40.0% | |
| TACTACCCTCAATCTGAGTT+TGG | - | chr1_4:6373720-6373739 | Msa0146670:intron | 40.0% | |
| ACTACCCTCAATCTGAGTTT+GGG | - | chr1_4:6373721-6373740 | Msa0146670:intron | 40.0% | |
| ATACGTTTAGCCCCTGAAAT+GGG | - | chr1_4:6373825-6373844 | Msa0146670:intron | 40.0% | |
| ATTATGAGAATTGGCAGCGA+TGG | - | chr1_4:6374031-6374050 | Msa0146670:intron | 40.0% | |
| ! | GAAACTTCAGAGCTTGGTTT+TGG | + | chr1_4:6374070-6374089 | None:intergenic | 40.0% |
| CCCAAAGGAAAAGAAACTTG+AGG | - | chr1_4:6374117-6374136 | Msa0146670:intron | 40.0% | |
| CTAACTCCAATAACAGAGTG+AGG | + | chr1_4:6374154-6374173 | None:intergenic | 40.0% | |
| !! | AATTTTGACCTAAGCCGACT+GGG | + | chr1_4:6374295-6374314 | None:intergenic | 40.0% |
| !! | AAATTTTGACCTAAGCCGAC+TGG | + | chr1_4:6374296-6374315 | None:intergenic | 40.0% |
| CATGGTTAGCGAGATGTTAA+AGG | - | chr1_4:6374343-6374362 | Msa0146670:CDS | 40.0% | |
| GCGAGATGTTAAAGGAGATA+AGG | - | chr1_4:6374351-6374370 | Msa0146670:CDS | 40.0% | |
| GTCAAACACTTGCAGTTCAA+CGG | - | chr1_4:6374453-6374472 | Msa0146670:CDS | 40.0% | |
| ATCAAGTGATAGTCCAATCC+TGG | - | chr1_4:6374588-6374607 | Msa0146670:CDS | 40.0% | |
| ! | CAAAATCTAAGGTCCAGGAT+TGG | + | chr1_4:6374604-6374623 | None:intergenic | 40.0% |
| CTTGCTCGCAACAAAATCTA+AGG | + | chr1_4:6374615-6374634 | None:intergenic | 40.0% | |
| ! | CTTAGATTTTGTTGCGAGCA+AGG | - | chr1_4:6374613-6374632 | Msa0146670:CDS | 40.0% |
| TGGTAGTTGCGTAGGGTTTA+AGG | + | chr1_4:6369061-6369080 | None:intergenic | 45.0% | |
| !! | TTGATGGTGGTAGTTGCGTA+GGG | + | chr1_4:6369068-6369087 | None:intergenic | 45.0% |
| CACGAACGGTGATGATTACT+TGG | + | chr1_4:6369125-6369144 | None:intergenic | 45.0% | |
| CAAGTAATCATCACCGTTCG+TGG | - | chr1_4:6369123-6369142 | Msa0146670:three_prime_UTR | 45.0% | |
| ATACTTCCAATGGGTGGTCA+TGG | - | chr1_4:6369285-6369304 | Msa0146670:three_prime_UTR | 45.0% | |
| AGGTTTAATGCGAAACGTGG+TGG | - | chr1_4:6369372-6369391 | Msa0146670:CDS | 45.0% | |
| ! | GGTGGTAATGTTGATGCTGT+TGG | - | chr1_4:6369390-6369409 | Msa0146670:CDS | 45.0% |
| GGAACAGGAATACGAACAGT+AGG | + | chr1_4:6369453-6369472 | None:intergenic | 45.0% | |
| GTCACTTAATATGGGACGGA+GGG | + | chr1_4:6369894-6369913 | None:intergenic | 45.0% | |
| ! | TGTCACTTAATATGGGACGG+AGG | + | chr1_4:6369895-6369914 | None:intergenic | 45.0% |
| CTTAGATGGTAAAAGGCTGG+AGG | - | chr1_4:6370195-6370214 | Msa0146670:intron | 45.0% | |
| ACTGAACTGGTGTGAACACT+AGG | - | chr1_4:6370356-6370375 | Msa0146670:intron | 45.0% | |
| CTTACCACTTTGGCCATGTA+TGG | - | chr1_4:6370675-6370694 | Msa0146670:intron | 45.0% | |
| CTAACCATACATGGCCAAAG+TGG | + | chr1_4:6370682-6370701 | None:intergenic | 45.0% | |
| ! | TTAGCTGATTTAGCACGACC+CGG | - | chr1_4:6370938-6370957 | Msa0146670:CDS | 45.0% |
| GCAACAAGAACTTCATCACC+GGG | + | chr1_4:6370959-6370978 | None:intergenic | 45.0% | |
| CGCAACAAGAACTTCATCAC+CGG | + | chr1_4:6370960-6370979 | None:intergenic | 45.0% | |
| GTGATGAAGTTCTTGTTGCG+AGG | - | chr1_4:6370960-6370979 | Msa0146670:CDS | 45.0% | |
| GATGAAGTTCTTGTTGCGAG+GGG | - | chr1_4:6370962-6370981 | Msa0146670:CDS | 45.0% | |
| ! | GATGAGAGATGACTCGGATA+AGG | - | chr1_4:6371405-6371424 | Msa0146670:intron | 45.0% |
| CTTACTTGCTTGCATCTCTC+TGG | - | chr1_4:6371464-6371483 | Msa0146670:intron | 45.0% | |
| !!! | GTTTTGGTTCATGGTCAACC+TGG | - | chr1_4:6371977-6371996 | Msa0146670:intron | 45.0% |
| ! | TTTGGTTCATGGTCAACCTG+GGG | - | chr1_4:6371979-6371998 | Msa0146670:intron | 45.0% |
| ! | AACCGTGGAATGTTGATGAG+TGG | - | chr1_4:6372128-6372147 | Msa0146670:intron | 45.0% |
| TTGTAGGGACTTCCAAATGC+TGG | - | chr1_4:6372452-6372471 | Msa0146670:intron | 45.0% | |
| TGTAGGGACTTCCAAATGCT+GGG | - | chr1_4:6372453-6372472 | Msa0146670:intron | 45.0% | |
| !! | AGCGTTGATTTCCCAGCATT+TGG | + | chr1_4:6372467-6372486 | None:intergenic | 45.0% |
| !! | CTTGATGGTGATCCCAACTT+GGG | - | chr1_4:6372563-6372582 | Msa0146670:intron | 45.0% |
| !! | TCTTATAGAAGGTGCCCACT+TGG | - | chr1_4:6372631-6372650 | Msa0146670:intron | 45.0% |
| !! | CTTATAGAAGGTGCCCACTT+GGG | - | chr1_4:6372632-6372651 | Msa0146670:intron | 45.0% |
| CAGTAGATGCGTCAACAACA+TGG | + | chr1_4:6372804-6372823 | None:intergenic | 45.0% | |
| ! | TTTTGTGCGTTGAGGTGTGT+TGG | + | chr1_4:6373102-6373121 | None:intergenic | 45.0% |
| ! | TATGGTCGTTCAAGGTACTC+AGG | + | chr1_4:6373650-6373669 | None:intergenic | 45.0% |
| GAATAAGATTGACCTGCCAG+AGG | - | chr1_4:6373682-6373701 | Msa0146670:intron | 45.0% | |
| CTCAGATTGAGGGTAGTAGT+AGG | + | chr1_4:6373718-6373737 | None:intergenic | 45.0% | |
| TCACTAGACTCCGCAATGAT+GGG | + | chr1_4:6373800-6373819 | None:intergenic | 45.0% | |
| ATCATTGCGGAGTCTAGTGA+GGG | - | chr1_4:6373800-6373819 | Msa0146670:intron | 45.0% | |
| CATACGTTTAGCCCCTGAAA+TGG | - | chr1_4:6373824-6373843 | Msa0146670:intron | 45.0% | |
| AAACAGAGCCTCCCATTTCA+GGG | + | chr1_4:6373839-6373858 | None:intergenic | 45.0% | |
| TAATACGGAAGGGTGAGCTT+TGG | + | chr1_4:6373916-6373935 | None:intergenic | 45.0% | |
| GACTGAAGAAAGTGACCCAA+AGG | - | chr1_4:6374102-6374121 | Msa0146670:intron | 45.0% | |
| ATCAACGCACTGCCTTAAAG+CGG | + | chr1_4:6374378-6374397 | None:intergenic | 45.0% | |
| ACTAGAAACCAACGGTTCCT+TGG | + | chr1_4:6374402-6374421 | None:intergenic | 45.0% | |
| ATAGGATGCAAATCTCACCG+TGG | + | chr1_4:6374428-6374447 | None:intergenic | 45.0% | |
| ! | CGCAACAAAATCTAAGGTCC+AGG | + | chr1_4:6374609-6374628 | None:intergenic | 45.0% |
| !! | GTTGATGGTGGTAGTTGCGT+AGG | + | chr1_4:6369069-6369088 | None:intergenic | 50.0% |
| GTAATCATCACCGTTCGTGG+CGG | - | chr1_4:6369126-6369145 | Msa0146670:three_prime_UTR | 50.0% | |
| ACCTGGGGAGGAAGTTAAGT+TGG | - | chr1_4:6371994-6372013 | Msa0146670:intron | 50.0% | |
| TCCAACTTAACTTCCTCCCC+AGG | + | chr1_4:6371998-6372017 | None:intergenic | 50.0% | |
| TGCTGGGAAATCAACGCTTC+TGG | - | chr1_4:6372469-6372488 | Msa0146670:intron | 50.0% | |
| ATCGGGTTTCGCAAGCGTAA+TGG | + | chr1_4:6372498-6372517 | None:intergenic | 50.0% | |
| ! | CCATCAAGGCGTCCAAGATT+TGG | + | chr1_4:6372551-6372570 | None:intergenic | 50.0% |
| CCAAATCTTGGACGCCTTGA+TGG | - | chr1_4:6372548-6372567 | Msa0146670:intron | 50.0% | |
| ! | CCAAGTTGGGATCACCATCA+AGG | + | chr1_4:6372565-6372584 | None:intergenic | 50.0% |
| !! | CCTTGATGGTGATCCCAACT+TGG | - | chr1_4:6372562-6372581 | Msa0146670:intron | 50.0% |
| TACATCCCTGCTCCCAAGTT+GGG | + | chr1_4:6372578-6372597 | None:intergenic | 50.0% | |
| ATACATCCCTGCTCCCAAGT+TGG | + | chr1_4:6372579-6372598 | None:intergenic | 50.0% | |
| GCTACATTGGCAGATTTGCC+TGG | - | chr1_4:6372608-6372627 | Msa0146670:intron | 50.0% | |
| TGGGCACCTTCTATAAGACC+AGG | + | chr1_4:6372629-6372648 | None:intergenic | 50.0% | |
| ! | TGAGGCATCTAAGAAGGACC+CGG | - | chr1_4:6372770-6372789 | Msa0146670:intron | 50.0% |
| AACAACATGGACCAGTAGCC+GGG | + | chr1_4:6372791-6372810 | None:intergenic | 50.0% | |
| CAACAACATGGACCAGTAGC+CGG | + | chr1_4:6372792-6372811 | None:intergenic | 50.0% | |
| GGAAACTACATACCTCTGGC+AGG | + | chr1_4:6373697-6373716 | None:intergenic | 50.0% | |
| CTCACTAGACTCCGCAATGA+TGG | + | chr1_4:6373801-6373820 | None:intergenic | 50.0% | |
| CATCATTGCGGAGTCTAGTG+AGG | - | chr1_4:6373799-6373818 | Msa0146670:intron | 50.0% | |
| AACAGAGCCTCCCATTTCAG+GGG | + | chr1_4:6373838-6373857 | None:intergenic | 50.0% | |
| GAAACAGAGCCTCCCATTTC+AGG | + | chr1_4:6373840-6373859 | None:intergenic | 50.0% | |
| ACGGTAAAGTAGACGCCATG+TGG | + | chr1_4:6373889-6373908 | None:intergenic | 50.0% | |
| ! | AAGGGTGAGCTTTGGTGCAA+CGG | + | chr1_4:6373908-6373927 | None:intergenic | 50.0% |
| TGAGCCGAAACTTCAGAGCT+TGG | + | chr1_4:6374076-6374095 | None:intergenic | 50.0% | |
| CCAATAACAGAGTGAGGTCG+TGG | + | chr1_4:6374148-6374167 | None:intergenic | 50.0% | |
| CCACGACCTCACTCTGTTAT+TGG | - | chr1_4:6374145-6374164 | Msa0146670:intron | 50.0% | |
| ! | TCATAGTACCCAGTCGGCTT+AGG | - | chr1_4:6374284-6374303 | Msa0146670:intron | 50.0% |
| ! | AGGAGATAAGGGCCGCTTTA+AGG | - | chr1_4:6374363-6374382 | Msa0146670:CDS | 50.0% |
| !! | AAGGCAGTGCGTTGATTCCA+AGG | - | chr1_4:6374382-6374401 | Msa0146670:CDS | 50.0% |
| !! | CGTTGATTCCAAGGAACCGT+TGG | - | chr1_4:6374391-6374410 | Msa0146670:CDS | 50.0% |
| CGTGGCACACTAGAAACCAA+CGG | + | chr1_4:6374410-6374429 | None:intergenic | 50.0% | |
| !! | CGTTGGTTTCTAGTGTGCCA+CGG | - | chr1_4:6374408-6374427 | Msa0146670:CDS | 50.0% |
| TTGCAGTTCAACGGCGCTTT+CGG | - | chr1_4:6374462-6374481 | Msa0146670:CDS | 50.0% | |
| ! | TAGGCGTCGCTACCATTTCA+TGG | + | chr1_4:6374846-6374865 | None:intergenic | 50.0% |
| ! | ATGGTAGCGACGCCTATTCA+TGG | - | chr1_4:6374850-6374869 | Msa0146670:CDS | 50.0% |
| CTTCCAATGGGTGGTCATGG+TGG | - | chr1_4:6369288-6369307 | Msa0146670:three_prime_UTR | 55.0% | |
| TCACCACCATGACCACCCAT+TGG | + | chr1_4:6369294-6369313 | None:intergenic | 55.0% | |
| GAAGTTCTTGTTGCGAGGGG+TGG | - | chr1_4:6370965-6370984 | Msa0146670:CDS | 55.0% | |
| ! | CAACGTCGGCTACAACTCGT+AGG | + | chr1_4:6372027-6372046 | None:intergenic | 55.0% |
| CTACGAGTTGTAGCCGACGT+TGG | - | chr1_4:6372025-6372044 | Msa0146670:intron | 55.0% | |
| GTGATCCCAACTTGGGAGCA+GGG | - | chr1_4:6372570-6372589 | Msa0146670:intron | 55.0% | |
| !! | AGAAGGTGCCCACTTGGGAA+AGG | - | chr1_4:6372637-6372656 | Msa0146670:intron | 55.0% |
| TCTAAGAAGGACCCGGCTAC+TGG | - | chr1_4:6372777-6372796 | Msa0146670:intron | 55.0% | |
| AAAGGGAGGCTCAGTGCATG+AGG | - | chr1_4:6373772-6373791 | Msa0146670:intron | 55.0% | |
| GCATGAGGCTCCCATCATTG+CGG | - | chr1_4:6373787-6373806 | Msa0146670:intron | 55.0% | |
| CGTTTAGCCCCTGAAATGGG+AGG | - | chr1_4:6373828-6373847 | Msa0146670:intron | 55.0% | |
| AAAGTAGACGCCATGTGGCG+AGG | + | chr1_4:6373884-6373903 | None:intergenic | 55.0% | |
| ! | ATCACCGTTCGTGGCGGAGA+CGG | - | chr1_4:6369132-6369151 | Msa0146670:three_prime_UTR | 60.0% |
| CTTGTTGCGAGGGGTGGACA+AGG | - | chr1_4:6370971-6370990 | Msa0146670:CDS | 60.0% | |
| TTGCGAGGGGTGGACAAGGA+GGG | - | chr1_4:6370975-6370994 | Msa0146670:CDS | 60.0% | |
| GGTTCATGGTCAACCTGGGG+AGG | - | chr1_4:6371982-6372001 | Msa0146670:intron | 60.0% | |
| GGTGATCCCAACTTGGGAGC+AGG | - | chr1_4:6372569-6372588 | Msa0146670:intron | 60.0% | |
| ACCACCGTCTCCGCCACGAA+CGG | + | chr1_4:6369139-6369158 | None:intergenic | 65.0% | |
| GTTGCGAGGGGTGGACAAGG+AGG | - | chr1_4:6370974-6370993 | Msa0146670:CDS | 65.0% | |
| TGCGAGGGGTGGACAAGGAG+GGG | - | chr1_4:6370976-6370995 | Msa0146670:CDS | 65.0% | |
| CCATGTGGCGAGGTGGCCTT+GGG | + | chr1_4:6373874-6373893 | None:intergenic | 65.0% | |
| GTAGACGCCATGTGGCGAGG+TGG | + | chr1_4:6373881-6373900 | None:intergenic | 65.0% | |
| ! | ACCGTTCGTGGCGGAGACGG+TGG | - | chr1_4:6369135-6369154 | Msa0146670:three_prime_UTR | 70.0% |
| ! | CGTGGCGGAGACGGTGGTCA+CGG | - | chr1_4:6369141-6369160 | Msa0146670:three_prime_UTR | 70.0% |
| CCCAAGGCCACCTCGCCACA+TGG | - | chr1_4:6373871-6373890 | Msa0146670:intron | 70.0% | |
| GCCATGTGGCGAGGTGGCCT+TGG | + | chr1_4:6373875-6373894 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 6368868 | 6374909 | 6368868 | ID=Msa0146670;Name=Msa0146670 |
| chr1_4 | mRNA | 6368868 | 6374909 | 6368868 | ID=Msa0146670-mRNA-1;Parent=Msa0146670;Name=Msa0146670-mRNA-1;_AED=0.03;_eAED=0.03;_QI=39|1|1|1|1|1|9|476|496 |
| chr1_4 | exon | 6368868 | 6369443 | 6368868 | ID=Msa0146670-mRNA-1:exon:2802;Parent=Msa0146670-mRNA-1 |
| chr1_4 | exon | 6369598 | 6369779 | 6369598 | ID=Msa0146670-mRNA-1:exon:2801;Parent=Msa0146670-mRNA-1 |
| chr1_4 | exon | 6370074 | 6370148 | 6370074 | ID=Msa0146670-mRNA-1:exon:2800;Parent=Msa0146670-mRNA-1 |
| chr1_4 | exon | 6370919 | 6371026 | 6370919 | ID=Msa0146670-mRNA-1:exon:2799;Parent=Msa0146670-mRNA-1 |
| chr1_4 | exon | 6371119 | 6371319 | 6371119 | ID=Msa0146670-mRNA-1:exon:2798;Parent=Msa0146670-mRNA-1 |
| chr1_4 | exon | 6371723 | 6371800 | 6371723 | ID=Msa0146670-mRNA-1:exon:2797;Parent=Msa0146670-mRNA-1 |
| chr1_4 | exon | 6372351 | 6372434 | 6372351 | ID=Msa0146670-mRNA-1:exon:2796;Parent=Msa0146670-mRNA-1 |
| chr1_4 | exon | 6372780 | 6372871 | 6372780 | ID=Msa0146670-mRNA-1:exon:2795;Parent=Msa0146670-mRNA-1 |
| chr1_4 | exon | 6374300 | 6374909 | 6374300 | ID=Msa0146670-mRNA-1:exon:2794;Parent=Msa0146670-mRNA-1 |
| chr1_4 | five_prime_UTR | 6374871 | 6374909 | 6374871 | ID=Msa0146670-mRNA-1:five_prime_utr;Parent=Msa0146670-mRNA-1 |
| chr1_4 | CDS | 6374300 | 6374870 | 6374300 | ID=Msa0146670-mRNA-1:cds;Parent=Msa0146670-mRNA-1 |
| chr1_4 | CDS | 6372780 | 6372871 | 6372780 | ID=Msa0146670-mRNA-1:cds;Parent=Msa0146670-mRNA-1 |
| chr1_4 | CDS | 6372351 | 6372434 | 6372351 | ID=Msa0146670-mRNA-1:cds;Parent=Msa0146670-mRNA-1 |
| chr1_4 | CDS | 6371723 | 6371800 | 6371723 | ID=Msa0146670-mRNA-1:cds;Parent=Msa0146670-mRNA-1 |
| chr1_4 | CDS | 6371119 | 6371319 | 6371119 | ID=Msa0146670-mRNA-1:cds;Parent=Msa0146670-mRNA-1 |
| chr1_4 | CDS | 6370919 | 6371026 | 6370919 | ID=Msa0146670-mRNA-1:cds;Parent=Msa0146670-mRNA-1 |
| chr1_4 | CDS | 6370074 | 6370148 | 6370074 | ID=Msa0146670-mRNA-1:cds;Parent=Msa0146670-mRNA-1 |
| chr1_4 | CDS | 6369598 | 6369779 | 6369598 | ID=Msa0146670-mRNA-1:cds;Parent=Msa0146670-mRNA-1 |
| chr1_4 | CDS | 6369344 | 6369443 | 6369344 | ID=Msa0146670-mRNA-1:cds;Parent=Msa0146670-mRNA-1 |
| chr1_4 | three_prime_UTR | 6368868 | 6369343 | 6368868 | ID=Msa0146670-mRNA-1:three_prime_utr;Parent=Msa0146670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
