AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0485280


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0485280 MtrunA17_Chr4g0063651 96.992 133 4 0 1 133 1 133 4.86e-91 259
Msa0485280 MtrunA17_Chr3g0137861 53.846 104 47 1 29 132 37 139 1.30e-33 114
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0485280 AT3G47650.1 67.816 87 27 1 47 133 51 136 1.05e-39 130

Find 37 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTGGAAACTTTCAGTCTT+TGG 0.238603 3_4:+2854259 Msa0485280:CDS
GAAGATTTCAAGGAAGAAAT+AGG 0.288393 3_4:-2854061 None:intergenic
TATTTGTTTCAGGGGTAAAA+AGG 0.295472 3_4:+2856237 Msa0485280:intron
TTCAGAGAAACTTCCTTCAT+TGG 0.310654 3_4:-2854230 None:intergenic
CTTTCAGTCTTTGGTAGTTA+AGG 0.334458 3_4:+2854268 Msa0485280:CDS
TGTACACAATGCCAAGGTTC+TGG 0.337124 3_4:+2856025 Msa0485280:CDS
CACTTCAGACCAAGCTATAA+TGG 0.354403 3_4:+2854018 Msa0485280:exon
AGGAGCTGTTATTGGTAATT+CGG 0.357554 3_4:+2854190 Msa0485280:intron
CCTTCATTGGAAAAGCCTTT+CGG 0.366502 3_4:-2854217 None:intergenic
TTTGATGATTAGAAGAAGAT+TGG 0.375947 3_4:+2856316 Msa0485280:exon
GTGAAGGAGTGAAGTGTTAT+CGG 0.387571 3_4:-2853993 None:intergenic
ACTAACAACATAGGAACAAC+TGG 0.406823 3_4:-2856398 None:intergenic
AATACAATACATAAATGAAT+AGG 0.428057 3_4:-2856434 None:intergenic
GTGGACTATGCTGGCTATGC+AGG 0.447749 3_4:+2856089 Msa0485280:CDS
AATTTGATAGATCACTTCAA+TGG 0.456646 3_4:+2856052 Msa0485280:CDS
AGGTGTGTTTGAAGATTTCA+AGG 0.464751 3_4:-2854071 None:intergenic
TGTGCTGATTGTACTGGAAA+TGG 0.465789 3_4:+2855180 Msa0485280:CDS
ATAGTCCACCAGCTTTAAAT+CGG 0.467197 3_4:-2856075 None:intergenic
TAGCTGTGAACAAAGAGAAA+AGG 0.480249 3_4:+2856365 Msa0485280:three_prime_UTR
TTAAAGCTGGTGGACTATGC+TGG 0.490910 3_4:+2856080 Msa0485280:CDS
TGTGGAAGCTGTAATGGGGC+TGG 0.508502 3_4:+2856268 Msa0485280:CDS
TTCAATGGCCGATTTAAAGC+TGG 0.509356 3_4:+2856067 Msa0485280:CDS
ATTGTTTGTGCTGATTGTAC+TGG 0.511973 3_4:+2855174 Msa0485280:CDS
GTTTCTCTGAATTCTAAAGC+TGG 0.512309 3_4:+2854242 Msa0485280:CDS
TGGTAATTCGGTTGTCCGAA+AGG 0.519727 3_4:+2854202 Msa0485280:CDS
AAGATTGCGCCATTATAGCT+TGG 0.538410 3_4:-2854027 None:intergenic
TCAAATTAACTCCAGAACCT+TGG 0.541033 3_4:-2856036 None:intergenic
CTGAGTTTATAATTGTTCCA+TGG 0.553107 3_4:+2856478 Msa0485280:three_prime_UTR
AATGGCCGATTTAAAGCTGG+TGG 0.561238 3_4:+2856070 Msa0485280:CDS
TGAACAAAGAGAAAAGGAAG+TGG 0.568929 3_4:+2856371 Msa0485280:three_prime_UTR
ATTTATGTATTGTATTGTTG+TGG 0.585993 3_4:+2856441 Msa0485280:three_prime_UTR
AGTAGAATTACACTCATCCA+TGG 0.595035 3_4:-2856495 None:intergenic
GCTACAGAAGATAGTAGCAA+AGG 0.599716 3_4:+2855132 Msa0485280:CDS
TTGAAATCTTCAAACACACC+TGG 0.600375 3_4:+2854073 Msa0485280:CDS
CTTGGTCTGAAGTGAAGTGA+AGG 0.606003 3_4:-2854009 None:intergenic
ATAGAATGTACACAATGCCA+AGG 0.643179 3_4:+2856019 Msa0485280:CDS
TTTGTGTGGAAGCTGTAATG+GGG 0.699284 3_4:+2856264 Msa0485280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGTATTTTATTTGTAAATT+GGG - chr3_4:2854312-2854331 None:intergenic 10.0%
!!! AAAGTATTTTATTTGTAAAT+TGG - chr3_4:2854313-2854332 None:intergenic 10.0%
!!! GAATTTGTTTCAATTTTAAT+AGG + chr3_4:2854170-2854189 Msa0485280:intron 15.0%
!! TTATAAAAATATCTGCAAAA+AGG - chr3_4:2854625-2854644 None:intergenic 15.0%
!! TTATTGAAGAAAAATTAAAC+TGG - chr3_4:2854774-2854793 None:intergenic 15.0%
!! AAGGAATAATTTCTAAATTT+AGG + chr3_4:2854893-2854912 Msa0485280:intron 15.0%
!! AATAGTAAAAACTAATTACA+GGG - chr3_4:2854959-2854978 None:intergenic 15.0%
!!! GATTTTTTAAGCATATTTTA+GGG + chr3_4:2855522-2855541 Msa0485280:intron 15.0%
!! AATACAATACATAAATGAAT+AGG - chr3_4:2856437-2856456 None:intergenic 15.0%
!! AAATAAAAGTTAATAGTACC+AGG - chr3_4:2854094-2854113 None:intergenic 20.0%
!!! TCATTTTCTCAAATTATCAT+TGG + chr3_4:2854454-2854473 Msa0485280:intron 20.0%
!! TGAAATGAAAAAGAGAAATT+TGG + chr3_4:2854645-2854664 Msa0485280:intron 20.0%
!! TCAAATATGAAAGAATGAAA+TGG - chr3_4:2854694-2854713 None:intergenic 20.0%
!!! ATATTTGAAACAGTGAATTA+TGG + chr3_4:2854706-2854725 Msa0485280:intron 20.0%
!! TTTCTTCAATAATAGAAAGT+AGG + chr3_4:2854782-2854801 Msa0485280:intron 20.0%
!! ATAGTAAAAACTAATTACAG+GGG - chr3_4:2854958-2854977 None:intergenic 20.0%
!! CAATAGTAAAAACTAATTAC+AGG - chr3_4:2854960-2854979 None:intergenic 20.0%
!!! CTTTGATTTTGATTTAATAC+AGG + chr3_4:2855110-2855129 Msa0485280:intron 20.0%
!!! AGATTTCAACTTTCTTTTTA+TGG + chr3_4:2855216-2855235 Msa0485280:intron 20.0%
!!! GGATTTTTTAAGCATATTTT+AGG + chr3_4:2855521-2855540 Msa0485280:intron 20.0%
!! AAAAGTCATAATTAAGAACA+AGG + chr3_4:2855839-2855858 Msa0485280:intron 20.0%
!! ATGTATGTATATTTGTTTCA+GGG + chr3_4:2856228-2856247 Msa0485280:intron 20.0%
!! ATTTATGTATTGTATTGTTG+TGG + chr3_4:2856441-2856460 Msa0485280:three_prime_UTR 20.0%
!!! TTCTACTATATTTTGTTGAT+TGG + chr3_4:2856511-2856530 Msa0485280:three_prime_UTR 20.0%
!!! ATTTTAATAGGAGCTGTTAT+TGG + chr3_4:2854182-2854201 Msa0485280:intron 25.0%
!! GATTAGTTGAATTCTATGAA+AGG + chr3_4:2854516-2854535 Msa0485280:intron 25.0%
! TTTGGATATCTGTTGTATAA+TGG + chr3_4:2854555-2854574 Msa0485280:intron 25.0%
! AATTTCTGTATTCATTGCAT+TGG + chr3_4:2854847-2854866 Msa0485280:intron 25.0%
! TCAAAATCAAAGACTTATTC+AGG - chr3_4:2855102-2855121 None:intergenic 25.0%
! AGAAAAATCTCCAAACTATT+GGG - chr3_4:2855461-2855480 None:intergenic 25.0%
!! TGCTTTTGTTACCAATTATT+TGG + chr3_4:2855549-2855568 Msa0485280:intron 25.0%
! TGAAGAAAAGTTGAAGAAAA+AGG - chr3_4:2855723-2855742 None:intergenic 25.0%
! GAAAAATGAGTATAAAGTGT+TGG - chr3_4:2855783-2855802 None:intergenic 25.0%
! AATTTGATAGATCACTTCAA+TGG + chr3_4:2856052-2856071 Msa0485280:CDS 25.0%
! ATATACATACATGTTGCAAA+GGG - chr3_4:2856220-2856239 None:intergenic 25.0%
! AATATACATACATGTTGCAA+AGG - chr3_4:2856221-2856240 None:intergenic 25.0%
! CATGTATGTATATTTGTTTC+AGG + chr3_4:2856227-2856246 Msa0485280:intron 25.0%
! TGTATGTATATTTGTTTCAG+GGG + chr3_4:2856229-2856248 Msa0485280:intron 25.0%
!! TTTGATGATTAGAAGAAGAT+TGG + chr3_4:2856316-2856335 Msa0485280:exon 25.0%
! ACAAAAAAGACTAACAACAT+AGG - chr3_4:2856410-2856429 None:intergenic 25.0%
GAAGATTTCAAGGAAGAAAT+AGG - chr3_4:2854064-2854083 None:intergenic 30.0%
CTGAATATAATCACATGTGT+CGG - chr3_4:2854429-2854448 None:intergenic 30.0%
ATTCTATGAAAGGATATGTC+AGG + chr3_4:2854526-2854545 Msa0485280:intron 30.0%
TTCTATGAAAGGATATGTCA+GGG + chr3_4:2854527-2854546 Msa0485280:intron 30.0%
GAAAGAATGAAATGGAATCA+AGG - chr3_4:2854686-2854705 None:intergenic 30.0%
GCATTGGAAATTGTAATAGT+TGG + chr3_4:2854863-2854882 Msa0485280:intron 30.0%
!!! TGTAATAGTTGGCTTTTTGA+AGG + chr3_4:2854874-2854893 Msa0485280:intron 30.0%
! TAGTTTTTACTATTGTGTCG+TGG + chr3_4:2854965-2854984 Msa0485280:intron 30.0%
!! GAAGAGAAGTGTTGAAATAA+CGG + chr3_4:2854997-2855016 Msa0485280:intron 30.0%
AATGGCGCTCATTAATTTAA+AGG - chr3_4:2855282-2855301 None:intergenic 30.0%
ATGAAACAGACTGCTATAAA+TGG - chr3_4:2855300-2855319 None:intergenic 30.0%
ATGTTCGACTGTATTGTTTA+AGG - chr3_4:2855362-2855381 None:intergenic 30.0%
GAGAAAAATCTCCAAACTAT+TGG - chr3_4:2855462-2855481 None:intergenic 30.0%
!! ATTGTTGTTGATGATTCTCT+AGG + chr3_4:2855500-2855519 Msa0485280:intron 30.0%
! TGTTACCAATTATTTGGAGT+TGG + chr3_4:2855555-2855574 Msa0485280:intron 30.0%
! GTTACCAATTATTTGGAGTT+GGG + chr3_4:2855556-2855575 Msa0485280:intron 30.0%
! TTACCAATTATTTGGAGTTG+GGG + chr3_4:2855557-2855576 Msa0485280:intron 30.0%
ATGGATTTGAATCCATAAGA+CGG - chr3_4:2855674-2855693 None:intergenic 30.0%
! CTTCAACTTTTCTTCATGTT+TGG + chr3_4:2855727-2855746 Msa0485280:intron 30.0%
!! AAATGAGTATAAAGTGTTGG+AGG - chr3_4:2855780-2855799 None:intergenic 30.0%
AATCTTTCATGGAAAAGGTT+TGG - chr3_4:2855896-2855915 None:intergenic 30.0%
! ACCTTTTCCATGAAAGATTT+AGG + chr3_4:2855897-2855916 Msa0485280:intron 30.0%
CTACCTACATATTATGAATC+AGG + chr3_4:2855925-2855944 Msa0485280:intron 30.0%
GATCCTGATTCATAATATGT+AGG - chr3_4:2855931-2855950 None:intergenic 30.0%
! ATAACTTTTTGCTCAATTCC+AGG + chr3_4:2855992-2856011 Msa0485280:intron 30.0%
ATGCTCATACAAGATAACAA+AGG - chr3_4:2856137-2856156 None:intergenic 30.0%
GCAAAGGGATGATTATAATA+TGG - chr3_4:2856205-2856224 None:intergenic 30.0%
TATTTGTTTCAGGGGTAAAA+AGG + chr3_4:2856237-2856256 Msa0485280:intron 30.0%
! GGTAAAAAGGATATTTTGTG+TGG + chr3_4:2856250-2856269 Msa0485280:CDS 30.0%
CTGAGTTTATAATTGTTCCA+TGG + chr3_4:2856478-2856497 Msa0485280:three_prime_UTR 30.0%
AGGTGTGTTTGAAGATTTCA+AGG - chr3_4:2854074-2854093 None:intergenic 35.0%
TTGAAATCTTCAAACACACC+TGG + chr3_4:2854073-2854092 Msa0485280:CDS 35.0%
! AGGAGCTGTTATTGGTAATT+CGG + chr3_4:2854190-2854209 Msa0485280:intron 35.0%
TTCAGAGAAACTTCCTTCAT+TGG - chr3_4:2854233-2854252 None:intergenic 35.0%
!! GTTTCTCTGAATTCTAAAGC+TGG + chr3_4:2854242-2854261 Msa0485280:CDS 35.0%
! CTTTCAGTCTTTGGTAGTTA+AGG + chr3_4:2854268-2854287 Msa0485280:CDS 35.0%
! AACTAATCTATGAAGCACTC+CGG - chr3_4:2854504-2854523 None:intergenic 35.0%
AGAATGAAATGGAATCAAGG+AGG - chr3_4:2854683-2854702 None:intergenic 35.0%
CAAAGGCTATGGAATATACT+AGG - chr3_4:2854734-2854753 None:intergenic 35.0%
CTAGTATATTCCATAGCCTT+TGG + chr3_4:2854732-2854751 Msa0485280:intron 35.0%
TATTGTGTCGTGGTTAACAA+TGG + chr3_4:2854975-2854994 Msa0485280:intron 35.0%
GTTGAAATAACGGTTAGAGT+TGG + chr3_4:2855007-2855026 Msa0485280:intron 35.0%
GTGTACAACAGATCTGTAAT+AGG + chr3_4:2855038-2855057 Msa0485280:intron 35.0%
CTATGACAAGTATCAGGAAA+AGG - chr3_4:2855069-2855088 None:intergenic 35.0%
!! ATTGTTTGTGCTGATTGTAC+TGG + chr3_4:2855174-2855193 Msa0485280:CDS 35.0%
CAAACTATTGGGTTATCTCA+CGG - chr3_4:2855450-2855469 None:intergenic 35.0%
! GAGCTGATGTTTATAATGGA+AGG - chr3_4:2855628-2855647 None:intergenic 35.0%
TGGTGAGCTGATGTTTATAA+TGG - chr3_4:2855632-2855651 None:intergenic 35.0%
! GTTGATGCATTGACATCTAT+TGG - chr3_4:2855652-2855671 None:intergenic 35.0%
TAAGTACGAGGAAAAAGAGA+AGG - chr3_4:2855699-2855718 None:intergenic 35.0%
GAAGAAAAAGGATAAGTACG+AGG - chr3_4:2855711-2855730 None:intergenic 35.0%
! ACTTTTCTTCATGTTTGGCT+AGG + chr3_4:2855732-2855751 Msa0485280:intron 35.0%
GCCTAAATCTTTCATGGAAA+AGG - chr3_4:2855901-2855920 None:intergenic 35.0%
ATCATAAAGATTGCTTCCAC+TGG + chr3_4:2855965-2855984 Msa0485280:intron 35.0%
TCATAAAGATTGCTTCCACT+GGG + chr3_4:2855966-2855985 Msa0485280:intron 35.0%
ATAGAATGTACACAATGCCA+AGG + chr3_4:2856019-2856038 Msa0485280:CDS 35.0%
TCAAATTAACTCCAGAACCT+TGG - chr3_4:2856039-2856058 None:intergenic 35.0%
!! ATAGTCCACCAGCTTTAAAT+CGG - chr3_4:2856078-2856097 None:intergenic 35.0%
GTGTAACTGTGTTATGTTCT+TGG + chr3_4:2856157-2856176 Msa0485280:intron 35.0%
! ATTTTGTGTGGAAGCTGTAA+TGG + chr3_4:2856262-2856281 Msa0485280:CDS 35.0%
! TTTTGTGTGGAAGCTGTAAT+GGG + chr3_4:2856263-2856282 Msa0485280:CDS 35.0%
TAGCTGTGAACAAAGAGAAA+AGG + chr3_4:2856365-2856384 Msa0485280:three_prime_UTR 35.0%
TGAACAAAGAGAAAAGGAAG+TGG + chr3_4:2856371-2856390 Msa0485280:three_prime_UTR 35.0%
ACTAACAACATAGGAACAAC+TGG - chr3_4:2856401-2856420 None:intergenic 35.0%
AGTAGAATTACACTCATCCA+TGG - chr3_4:2856498-2856517 None:intergenic 35.0%
! GTGAAGGAGTGAAGTGTTAT+CGG - chr3_4:2853996-2854015 None:intergenic 40.0%
CACTTCAGACCAAGCTATAA+TGG + chr3_4:2854018-2854037 Msa0485280:exon 40.0%
AAGATTGCGCCATTATAGCT+TGG - chr3_4:2854030-2854049 None:intergenic 40.0%
CCTTCATTGGAAAAGCCTTT+CGG - chr3_4:2854220-2854239 None:intergenic 40.0%
AGCTGGAAACTTTCAGTCTT+TGG + chr3_4:2854259-2854278 Msa0485280:CDS 40.0%
! AGTCTTTGGTAGTTAAGGTG+AGG + chr3_4:2854273-2854292 Msa0485280:intron 40.0%
ACACGTCTTCAATCAAAGGT+TGG - chr3_4:2854372-2854391 None:intergenic 40.0%
! ACTAATCTATGAAGCACTCC+GGG - chr3_4:2854503-2854522 None:intergenic 40.0%
! AAATGGAATCAAGGAGGCAT+AGG - chr3_4:2854677-2854696 None:intergenic 40.0%
TACTGATCTACCAAAGGCTA+TGG - chr3_4:2854745-2854764 None:intergenic 40.0%
! CTACTGTACTGATCTACCAA+AGG - chr3_4:2854751-2854770 None:intergenic 40.0%
! AGGATCCTTAAAGAGTACAC+CGG + chr3_4:2854913-2854932 Msa0485280:intron 40.0%
TTACAGGGGTCTTACTAAAG+AGG - chr3_4:2854944-2854963 None:intergenic 40.0%
ATGCAGCTATGACAAGTATC+AGG - chr3_4:2855075-2855094 None:intergenic 40.0%
GCTACAGAAGATAGTAGCAA+AGG + chr3_4:2855132-2855151 Msa0485280:CDS 40.0%
!! TGTGCTGATTGTACTGGAAA+TGG + chr3_4:2855180-2855199 Msa0485280:CDS 40.0%
CGTGAGATAACCCAATAGTT+TGG + chr3_4:2855448-2855467 Msa0485280:intron 40.0%
GATCCCCAACTCCAAATAAT+TGG - chr3_4:2855563-2855582 None:intergenic 40.0%
TCAATGCATCAACCGTCTTA+TGG + chr3_4:2855659-2855678 Msa0485280:intron 40.0%
AGCTTCGCCTAAATCTTTCA+TGG - chr3_4:2855907-2855926 None:intergenic 40.0%
TGTGTACATTCTATTGCACC+TGG - chr3_4:2856013-2856032 None:intergenic 40.0%
! TTCAATGGCCGATTTAAAGC+TGG + chr3_4:2856067-2856086 Msa0485280:CDS 40.0%
TTTGTGTGGAAGCTGTAATG+GGG + chr3_4:2856264-2856283 Msa0485280:CDS 40.0%
!!! TGTAATGGGGCTGGTTTTAT+TGG + chr3_4:2856277-2856296 Msa0485280:CDS 40.0%
! CTTGGTCTGAAGTGAAGTGA+AGG - chr3_4:2854012-2854031 None:intergenic 45.0%
TGGTAATTCGGTTGTCCGAA+AGG + chr3_4:2854202-2854221 Msa0485280:CDS 45.0%
! CCGAAAGGCTTTTCCAATGA+AGG + chr3_4:2854217-2854236 Msa0485280:CDS 45.0%
CTGGACACGTCTTCAATCAA+AGG - chr3_4:2854376-2854395 None:intergenic 45.0%
!! TGTCCAGTGTTGACATGTTC+TGG + chr3_4:2854389-2854408 Msa0485280:intron 45.0%
ACACCAGAACATGTCAACAC+TGG - chr3_4:2854395-2854414 None:intergenic 45.0%
GGATATGTCAGGGCTATGTT+TGG + chr3_4:2854537-2854556 Msa0485280:intron 45.0%
! GGATCCTTAAAGAGTACACC+GGG + chr3_4:2854914-2854933 Msa0485280:intron 45.0%
! GATCCTTAAAGAGTACACCG+GGG + chr3_4:2854915-2854934 Msa0485280:intron 45.0%
! ATCCTTAAAGAGTACACCGG+GGG + chr3_4:2854916-2854935 Msa0485280:intron 45.0%
TCTTACTAAAGAGGTTCCCC+CGG - chr3_4:2854935-2854954 None:intergenic 45.0%
!! GTCGAACATCATGCTGATTC+CGG + chr3_4:2855373-2855392 Msa0485280:intron 45.0%
CAAAGACACTATGTTCTCGC+CGG - chr3_4:2855399-2855418 None:intergenic 45.0%
CGAGGAAAAAGAGAAGGACA+TGG - chr3_4:2855693-2855712 None:intergenic 45.0%
GCAAAAAGTTATCAGCCCAG+TGG - chr3_4:2855984-2856003 None:intergenic 45.0%
TGTACACAATGCCAAGGTTC+TGG + chr3_4:2856025-2856044 Msa0485280:CDS 45.0%
! AATGGCCGATTTAAAGCTGG+TGG + chr3_4:2856070-2856089 Msa0485280:CDS 45.0%
!! TTAAAGCTGGTGGACTATGC+TGG + chr3_4:2856080-2856099 Msa0485280:CDS 45.0%
!!! AATGGGGCTGGTTTTATTGG+TGG + chr3_4:2856280-2856299 Msa0485280:CDS 45.0%
TTCCCCCGGTGTACTCTTTA+AGG - chr3_4:2854921-2854940 None:intergenic 50.0%
!! AACATCATGCTGATTCCGGC+CGG + chr3_4:2855377-2855396 Msa0485280:intron 50.0%
ACGTGTCTCAGTCGTTGTCC+CGG + chr3_4:2854482-2854501 Msa0485280:intron 55.0%
! GTGGACTATGCTGGCTATGC+AGG + chr3_4:2856089-2856108 Msa0485280:CDS 55.0%
! TGTGGAAGCTGTAATGGGGC+TGG + chr3_4:2856268-2856287 Msa0485280:CDS 55.0%
GACACTATGTTCTCGCCGGC+CGG - chr3_4:2855395-2855414 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 2853964 2856580 2853964 ID=Msa0485280;Name=Msa0485280
chr3_4 mRNA 2853964 2856580 2853964 ID=Msa0485280-mRNA-1;Parent=Msa0485280;Name=Msa0485280-mRNA-1;_AED=0.10;_eAED=0.10;_QI=73|1|1|1|1|1|5|253|133
chr3_4 exon 2853964 2854094 2853964 ID=Msa0485280-mRNA-1:exon:971;Parent=Msa0485280-mRNA-1
chr3_4 exon 2854192 2854289 2854192 ID=Msa0485280-mRNA-1:exon:972;Parent=Msa0485280-mRNA-1
chr3_4 exon 2855132 2855201 2855132 ID=Msa0485280-mRNA-1:exon:973;Parent=Msa0485280-mRNA-1
chr3_4 exon 2856014 2856110 2856014 ID=Msa0485280-mRNA-1:exon:974;Parent=Msa0485280-mRNA-1
chr3_4 exon 2856249 2856580 2856249 ID=Msa0485280-mRNA-1:exon:975;Parent=Msa0485280-mRNA-1
chr3_4 five_prime_UTR 2853964 2854036 2853964 ID=Msa0485280-mRNA-1:five_prime_utr;Parent=Msa0485280-mRNA-1
chr3_4 CDS 2854037 2854094 2854037 ID=Msa0485280-mRNA-1:cds;Parent=Msa0485280-mRNA-1
chr3_4 CDS 2854192 2854289 2854192 ID=Msa0485280-mRNA-1:cds;Parent=Msa0485280-mRNA-1
chr3_4 CDS 2855132 2855201 2855132 ID=Msa0485280-mRNA-1:cds;Parent=Msa0485280-mRNA-1
chr3_4 CDS 2856014 2856110 2856014 ID=Msa0485280-mRNA-1:cds;Parent=Msa0485280-mRNA-1
chr3_4 CDS 2856249 2856327 2856249 ID=Msa0485280-mRNA-1:cds;Parent=Msa0485280-mRNA-1
chr3_4 three_prime_UTR 2856328 2856580 2856328 ID=Msa0485280-mRNA-1:three_prime_utr;Parent=Msa0485280-mRNA-1
Gene Sequence

>Msa0485280

ATGGCGCAATCTTTGTCTTTTGCTCCTATTTCTTCCTTGAAATCTTCAAACACACCTGGAGCTGTTATTGGTAATTCGGTTGTCCGAAAGGCTTTTCCAATGAAGGAAGTTTCTCTGAATTCTAAAGCTGGAAACTTTCAGTCTTTGGTAGTTAAGGCTACAGAAGATAGTAGCAAAGGCACAACAAAAATGAAGAGCATTGTTTGTGCTGATTGTACTGGAAATGGTGCAATAGAATGTACACAATGCCAAGGTTCTGGAGTTAATTTGATAGATCACTTCAATGGCCGATTTAAAGCTGGTGGACTATGCTGGCTATGCAGGGGTAAAAAGGATATTTTGTGTGGAAGCTGTAATGGGGCTGGTTTTATTGGTGGATTCATGAGCACATTTGATGATTAG

Protein sequence

>Msa0485280

MAQSLSFAPISSLKSSNTPGAVIGNSVVRKAFPMKEVSLNSKAGNFQSLVVKATEDSSKGTTKMKSIVCADCTGNGAIECTQCQGSGVNLIDHFNGRFKAGGLCWLCRGKKDILCGSCNGAGFIGGFMSTFDD*