AlfalfaGEDB | Msa1361910

M. sativa cultivar zhongmu-4 / Msa1361910

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005507 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0006109 GO:0006464 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009314 GO:0009408 GO:0009409 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009743 GO:0009744 GO:0009889 GO:0009890 GO:0009892 GO:0009941 GO:0009987 GO:0010033 GO:0010109 GO:0010110 GO:0015977 GO:0015979 GO:0016043 GO:0016051 GO:0016151 GO:0018149 GO:0018193 GO:0018198 GO:0018316 GO:0019222 GO:0019253 GO:0019538 GO:0019685 GO:0019899 GO:0022607 GO:0030674 GO:0031323 GO:0031324 GO:0031967 GO:0031975 GO:0032991 GO:0033554 GO:0034059 GO:0034285 GO:0034605 GO:0036211 GO:0036293 GO:0036294 GO:0042221 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045912 GO:0046872 GO:0046914 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060090 GO:0065003 GO:0065007 GO:0070417 GO:0070482 GO:0070887 GO:0071453 GO:0071454 GO:0071704 GO:0071840 GO:0080090 GO:0080152 GO:0080153 GO:0099080 GO:1901564 GO:1901576 GO:1901700 GO:1905156
PFAM: PF02672.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1361910	XP_003625969.1	95.312	128	5	1	1	127	1	128	3.26e-83	249

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1361910	sp\|Q9LZP9\|CP122_ARATH	59.398	133	46	5	1	127	1	131	4.43e-44	143

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1361910	G7KST6	95.312	128	5	1	1	127	1	128	1.56e-83	249

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0003470	Msa1361910	0.843081	1.744502e-58	-8.615850e-47
Msa0012460	Msa1361910	0.836452	9.279882e-57	-8.615850e-47
Msa0017120	Msa1361910	0.852203	5.384679e-61	-8.615850e-47
Msa0017130	Msa1361910	0.813001	3.192916e-51	-8.615850e-47
Msa0037820	Msa1361910	0.831368	1.736721e-55	-8.615850e-47
Msa0041540	Msa1361910	0.802787	4.752290e-49	-8.615850e-47
Msa0043680	Msa1361910	0.831700	1.438409e-55	-8.615850e-47
Msa0043940	Msa1361910	0.817508	3.179923e-52	-8.615850e-47
Msa0047470	Msa1361910	0.807711	4.422726e-50	-8.615850e-47
Msa0056040	Msa1361910	0.831969	1.234612e-55	-8.615850e-47
Msa0065390	Msa1361910	0.859089	5.263448e-63	-8.615850e-47
Msa0077910	Msa1361910	0.804553	2.043659e-49	-8.615850e-47
Msa0078090	Msa1361910	0.810277	1.248438e-50	-8.615850e-47
Msa0079250	Msa1361910	0.826463	2.676000e-54	-8.615850e-47
Msa0084680	Msa1361910	0.830869	2.303128e-55	-8.615850e-47
Msa0089210	Msa1361910	0.832277	1.036348e-55	-8.615850e-47
Msa0090800	Msa1361910	0.811693	6.162044e-51	-8.615850e-47
Msa0092660	Msa1361910	0.835591	1.534536e-56	-8.615850e-47
Msa0092710	Msa1361910	0.832831	7.552800e-56	-8.615850e-47
Msa0092730	Msa1361910	0.844013	9.834970e-59	-8.615850e-47
Msa0103780	Msa1361910	0.819221	1.301398e-52	-8.615850e-47
Msa0105210	Msa1361910	0.804163	2.464857e-49	-8.615850e-47
Msa0110710	Msa1361910	0.859251	4.708124e-63	-8.615850e-47
Msa1349360	Msa1361910	0.801639	8.189081e-49	-8.615850e-47
Msa1361910	Msa1373510	0.807100	5.961444e-50	-8.615850e-47
Msa1361910	Msa1376640	0.822492	2.301583e-53	-8.615850e-47
Msa1361910	Msa1381130	0.861072	1.326505e-63	-8.615850e-47
Msa1361910	Msa1385620	0.804240	2.374908e-49	-8.615850e-47
Msa1361910	Msa1388850	0.833536	5.041829e-56	-8.615850e-47
Msa1361910	Msa1405770	0.856920	2.320555e-62	-8.615850e-47
Msa1361910	Msa1412080	0.828369	9.340384e-55	-8.615850e-47
Msa1361910	Msa1412520	0.825090	5.664366e-54	-8.615850e-47
Msa1361910	Msa1423190	0.834211	3.417787e-56	-8.615850e-47
Msa1361910	Msa1432640	0.816016	6.871548e-52	-8.615850e-47
Msa1361910	Msa1434020	0.808471	3.047901e-50	-8.615850e-47
Msa1361910	Msa1439120	0.819357	1.211816e-52	-8.615850e-47
Msa1361910	Msa1439800	0.815464	9.123308e-52	-8.615850e-47
Msa1361910	Msa1440180	0.800281	1.551598e-48	-8.615850e-47
Msa1361910	Msa1442030	0.804569	2.028871e-49	-8.615850e-47
Msa1361910	Msa1444450	0.806023	1.006114e-49	-8.615850e-47
Msa1361910	Msa1449740	0.801606	8.316892e-49	-8.615850e-47
Msa1361910	Msa1455660	0.825987	3.473898e-54	-8.615850e-47
Msa1361910	Msa1456650	0.818186	2.235178e-52	-8.615850e-47
Msa0605230	Msa1361910	0.803712	3.058779e-49	-8.615850e-47
Msa0607280	Msa1361910	0.816764	4.673495e-52	-8.615850e-47
Msa0607300	Msa1361910	0.801171	1.021118e-48	-8.615850e-47
Msa0614230	Msa1361910	0.816917	4.318847e-52	-8.615850e-47
Msa0619330	Msa1361910	0.819967	8.793330e-53	-8.615850e-47
Msa0623270	Msa1361910	0.800631	1.316473e-48	-8.615850e-47
Msa0638710	Msa1361910	0.835139	1.996489e-56	-8.615850e-47
Msa0640880	Msa1361910	0.826560	2.537425e-54	-8.615850e-47
Msa0642650	Msa1361910	0.808248	3.400122e-50	-8.615850e-47
Msa0643800	Msa1361910	0.807381	5.198213e-50	-8.615850e-47
Msa0647460	Msa1361910	0.803016	4.262994e-49	-8.615850e-47
Msa0659040	Msa1361910	0.806001	1.016590e-49	-8.615850e-47
Msa0660820	Msa1361910	0.805791	1.125298e-49	-8.615850e-47
Msa0665910	Msa1361910	-0.807517	4.863343e-50	-8.615850e-47
Msa0667970	Msa1361910	0.836829	7.440160e-57	-8.615850e-47
Msa0678890	Msa1361910	0.805705	1.173177e-49	-8.615850e-47
Msa0681890	Msa1361910	0.852713	3.853059e-61	-8.615850e-47
Msa0685520	Msa1361910	0.809019	2.326707e-50	-8.615850e-47
Msa0686610	Msa1361910	0.809522	1.814965e-50	-8.615850e-47
Msa0690350	Msa1361910	0.806237	9.068459e-50	-8.615850e-47
Msa0690720	Msa1361910	0.800064	1.716917e-48	-8.615850e-47
Msa0703720	Msa1361910	0.844916	5.618669e-59	-8.615850e-47
Msa0703760	Msa1361910	0.846292	2.380074e-59	-8.615850e-47
Msa0704570	Msa1361910	0.815662	8.242409e-52	-8.615850e-47
Msa0706530	Msa1361910	0.813569	2.394987e-51	-8.615850e-47
Msa0707780	Msa1361910	0.803362	3.614498e-49	-8.615850e-47
Msa0709480	Msa1361910	0.803986	2.682164e-49	-8.615850e-47
Msa0717510	Msa1361910	0.814984	1.165878e-51	-8.615850e-47
Msa0719340	Msa1361910	0.809383	1.944102e-50	-8.615850e-47
Msa0720270	Msa1361910	0.833644	4.737278e-56	-8.615850e-47
Msa0726610	Msa1361910	0.806058	9.891810e-50	-8.615850e-47
Msa0729550	Msa1361910	0.808823	2.562602e-50	-8.615850e-47
Msa0730180	Msa1361910	0.806591	7.637949e-50	-8.615850e-47
Msa0734000	Msa1361910	0.806342	8.620269e-50	-8.615850e-47
Msa0738870	Msa1361910	0.830437	2.938868e-55	-8.615850e-47
Msa0738880	Msa1361910	0.836733	7.869817e-57	-8.615850e-47
Msa0738970	Msa1361910	0.800951	1.132601e-48	-8.615850e-47
Msa0740420	Msa1361910	0.801346	9.404645e-49	-8.615850e-47
Msa0770430	Msa1361910	0.826696	2.354286e-54	-8.615850e-47
Msa0772150	Msa1361910	0.816069	6.687290e-52	-8.615850e-47
Msa0780140	Msa1361910	0.830918	2.240790e-55	-8.615850e-47
Msa0783280	Msa1361910	0.804269	2.342968e-49	-8.615850e-47
Msa0789800	Msa1361910	0.809076	2.262559e-50	-8.615850e-47
Msa0802210	Msa1361910	0.825007	5.926997e-54	-8.615850e-47
Msa0803130	Msa1361910	0.841644	4.193954e-58	-8.615850e-47
Msa0804110	Msa1361910	0.835571	1.552901e-56	-8.615850e-47
Msa0806720	Msa1361910	0.800476	1.415871e-48	-8.615850e-47
Msa0806760	Msa1361910	0.803320	3.686988e-49	-8.615850e-47
Msa0809300	Msa1361910	0.826338	2.865242e-54	-8.615850e-47
Msa0811510	Msa1361910	0.821149	4.707703e-53	-8.615850e-47
Msa0812660	Msa1361910	0.803331	3.668168e-49	-8.615850e-47
Msa0819320	Msa1361910	0.826087	3.287548e-54	-8.615850e-47
Msa0819330	Msa1361910	0.800419	1.454362e-48	-8.615850e-47
Msa0819370	Msa1361910	0.833681	4.636664e-56	-8.615850e-47
Msa0841490	Msa1361910	0.841381	4.917471e-58	-8.615850e-47
Msa0122210	Msa1361910	0.807224	5.610277e-50	-8.615850e-47
Msa0125800	Msa1361910	0.810303	1.232529e-50	-8.615850e-47
Msa0130800	Msa1361910	0.800870	1.176536e-48	-8.615850e-47
Msa0135980	Msa1361910	0.841916	3.554194e-58	-8.615850e-47
Msa0137600	Msa1361910	0.837267	5.748002e-57	-8.615850e-47
Msa0141670	Msa1361910	0.821836	3.266256e-53	-8.615850e-47
Msa0141830	Msa1361910	0.805178	1.512906e-49	-8.615850e-47
Msa0144340	Msa1361910	0.832964	6.997077e-56	-8.615850e-47
Msa0146470	Msa1361910	0.827873	1.230178e-54	-8.615850e-47
Msa0146670	Msa1361910	0.800606	1.332111e-48	-8.615850e-47
Msa0150210	Msa1361910	0.824627	7.285646e-54	-8.615850e-47
Msa0152380	Msa1361910	0.817856	2.654020e-52	-8.615850e-47
Msa0157020	Msa1361910	0.870856	1.063745e-66	-8.615850e-47
Msa0170440	Msa1361910	0.804890	1.738466e-49	-8.615850e-47
Msa0171920	Msa1361910	0.832044	1.183093e-55	-8.615850e-47
Msa0178940	Msa1361910	0.819215	1.305420e-52	-8.615850e-47
Msa0182640	Msa1361910	0.816892	4.374676e-52	-8.615850e-47
Msa0185390	Msa1361910	0.857331	1.755076e-62	-8.615850e-47
Msa0207180	Msa1361910	0.802639	5.099665e-49	-8.615850e-47
Msa0223280	Msa1361910	0.821915	3.131288e-53	-8.615850e-47
Msa0230400	Msa1361910	0.806292	8.829346e-50	-8.615850e-47
Msa1224670	Msa1361910	0.847113	1.419705e-59	-8.615850e-47
Msa1238410	Msa1361910	0.804989	1.657282e-49	-8.615850e-47
Msa1250670	Msa1361910	0.814066	1.861409e-51	-8.615850e-47
Msa1259470	Msa1361910	0.805210	1.490105e-49	-8.615850e-47
Msa1263030	Msa1361910	0.842900	1.949356e-58	-8.615850e-47
Msa1271510	Msa1361910	0.811066	8.432564e-51	-8.615850e-47
Msa1284030	Msa1361910	0.801834	7.467493e-49	-8.615850e-47
Msa1293530	Msa1361910	0.823200	1.574300e-53	-8.615850e-47
Msa1302150	Msa1361910	0.805401	1.359074e-49	-8.615850e-47
Msa1309100	Msa1361910	0.840199	1.003790e-57	-8.615850e-47
Msa1322420	Msa1361910	0.807717	4.409478e-50	-8.615850e-47
Msa1325980	Msa1361910	0.805014	1.637284e-49	-8.615850e-47
Msa1334650	Msa1361910	0.834986	2.182592e-56	-8.615850e-47
Msa1337090	Msa1361910	0.810762	9.811199e-51	-8.615850e-47
Msa0367490	Msa1361910	0.834116	3.610049e-56	-8.615850e-47
Msa0375430	Msa1361910	0.803280	3.759500e-49	-8.615850e-47
Msa0380060	Msa1361910	0.817786	2.752545e-52	-8.615850e-47
Msa0380650	Msa1361910	0.805011	1.640126e-49	-8.615850e-47
Msa0382500	Msa1361910	0.822428	2.382089e-53	-8.615850e-47
Msa0393540	Msa1361910	0.828538	8.501535e-55	-8.615850e-47
Msa0415930	Msa1361910	0.800074	1.709532e-48	-8.615850e-47
Msa0417630	Msa1361910	0.856977	2.233555e-62	-8.615850e-47
Msa0421800	Msa1361910	0.830332	3.117357e-55	-8.615850e-47
Msa0429270	Msa1361910	0.800115	1.676356e-48	-8.615850e-47
Msa0430020	Msa1361910	0.809618	1.730713e-50	-8.615850e-47
Msa0432680	Msa1361910	0.825963	3.518504e-54	-8.615850e-47
Msa0436450	Msa1361910	0.801125	1.043437e-48	-8.615850e-47
Msa0462120	Msa1361910	0.809535	1.803580e-50	-8.615850e-47
Msa0467800	Msa1361910	0.847213	1.332841e-59	-8.615850e-47
Msa0467880	Msa1361910	0.844271	8.382636e-59	-8.615850e-47
Msa0480150	Msa1361910	0.813944	1.980951e-51	-8.615850e-47
Msa0987350	Msa1361910	0.806984	6.306201e-50	-8.615850e-47
Msa0990520	Msa1361910	0.829680	4.496479e-55	-8.615850e-47
Msa0992570	Msa1361910	0.820099	8.202308e-53	-8.615850e-47
Msa0992590	Msa1361910	0.812310	4.520984e-51	-8.615850e-47
Msa1001780	Msa1361910	0.815288	9.980760e-52	-8.615850e-47
Msa1002040	Msa1361910	0.832019	1.200408e-55	-8.615850e-47
Msa1004500	Msa1361910	0.818690	1.718697e-52	-8.615850e-47
Msa1004520	Msa1361910	0.800226	1.592051e-48	-8.615850e-47
Msa1015060	Msa1361910	0.800597	1.337671e-48	-8.615850e-47
Msa1022310	Msa1361910	0.819140	1.357824e-52	-8.615850e-47
Msa1027790	Msa1361910	0.847104	1.427995e-59	-8.615850e-47
Msa1030870	Msa1361910	0.841665	4.139614e-58	-8.615850e-47
Msa1040770	Msa1361910	0.802193	6.301553e-49	-8.615850e-47
Msa1044040	Msa1361910	0.813850	2.076851e-51	-8.615850e-47
Msa1045440	Msa1361910	0.824379	8.331887e-54	-8.615850e-47
Msa1051300	Msa1361910	0.804140	2.492185e-49	-8.615850e-47
Msa1055360	Msa1361910	0.801384	9.235361e-49	-8.615850e-47
Msa1061180	Msa1361910	0.827798	1.282406e-54	-8.615850e-47
Msa1067430	Msa1361910	0.802455	5.563799e-49	-8.615850e-47
Msa1075120	Msa1361910	0.816245	6.107634e-52	-8.615850e-47
Msa1097850	Msa1361910	0.811093	8.318859e-51	-8.615850e-47
Msa1099690	Msa1361910	0.802942	4.415709e-49	-8.615850e-47
Msa1106560	Msa1361910	0.835601	1.525803e-56	-8.615850e-47
Msa0245110	Msa1361910	0.803039	4.216214e-49	-8.615850e-47
Msa0247310	Msa1361910	0.800235	1.584936e-48	-8.615850e-47
Msa0257130	Msa1361910	0.843157	1.665659e-58	-8.615850e-47
Msa0259980	Msa1361910	0.807747	4.346119e-50	-8.615850e-47
Msa0261440	Msa1361910	0.815854	7.470062e-52	-8.615850e-47
Msa0274780	Msa1361910	0.801518	8.670667e-49	-8.615850e-47
Msa0280140	Msa1361910	0.816670	4.905584e-52	-8.615850e-47
Msa0291040	Msa1361910	0.805042	1.615861e-49	-8.615850e-47
Msa0292070	Msa1361910	0.801760	7.734262e-49	-8.615850e-47
Msa0296000	Msa1361910	0.818609	1.792733e-52	-8.615850e-47
Msa0296610	Msa1361910	0.812414	4.291694e-51	-8.615850e-47
Msa0315480	Msa1361910	0.810571	1.078696e-50	-8.615850e-47
Msa0333900	Msa1361910	0.817951	2.526152e-52	-8.615850e-47
Msa0334020	Msa1361910	0.818472	1.925166e-52	-8.615850e-47
Msa0334980	Msa1361910	0.851378	9.228260e-61	-8.615850e-47
Msa0344640	Msa1361910	0.810900	9.156307e-51	-8.615850e-47
Msa0349000	Msa1361910	0.838715	2.439212e-57	-8.615850e-47
Msa1112610	Msa1361910	0.846914	1.610184e-59	-8.615850e-47
Msa1115580	Msa1361910	0.826051	3.353203e-54	-8.615850e-47
Msa1119720	Msa1361910	0.815652	8.284985e-52	-8.615850e-47
Msa1137610	Msa1361910	0.805561	1.258178e-49	-8.615850e-47
Msa1157730	Msa1361910	0.819267	1.270521e-52	-8.615850e-47
Msa1166180	Msa1361910	0.820519	6.573249e-53	-8.615850e-47
Msa1166280	Msa1361910	0.813206	2.877712e-51	-8.615850e-47
Msa1171340	Msa1361910	0.807825	4.183971e-50	-8.615850e-47
Msa1183390	Msa1361910	0.811591	6.484739e-51	-8.615850e-47
Msa1183760	Msa1361910	0.836330	9.969475e-57	-8.615850e-47
Msa1190910	Msa1361910	0.834064	3.719871e-56	-8.615850e-47
Msa1197110	Msa1361910	0.801213	1.001238e-48	-8.615850e-47
Msa1198450	Msa1361910	0.810398	1.175991e-50	-8.615850e-47
Msa1200920	Msa1361910	0.804170	2.456227e-49	-8.615850e-47
Msa1215210	Msa1361910	0.824226	9.054815e-54	-8.615850e-47
Msa1215530	Msa1361910	0.805619	1.222846e-49	-8.615850e-47
Msa1219250	Msa1361910	0.832044	1.183425e-55	-8.615850e-47
Msa1220450	Msa1361910	-0.806394	8.401663e-50	-8.615850e-47
Msa1220740	Msa1361910	0.838220	3.272509e-57	-8.615850e-47
Msa1222390	Msa1361910	0.810834	9.466201e-51	-8.615850e-47
Msa1223840	Msa1361910	0.845197	4.719785e-59	-8.615850e-47
Msa0485280	Msa1361910	0.849207	3.751046e-60	-8.615850e-47
Msa0486570	Msa1361910	0.812757	3.611233e-51	-8.615850e-47
Msa0488830	Msa1361910	0.816678	4.887251e-52	-8.615850e-47
Msa0514260	Msa1361910	0.819004	1.458204e-52	-8.615850e-47
Msa0519200	Msa1361910	0.827037	1.951245e-54	-8.615850e-47
Msa0521780	Msa1361910	-0.822017	2.966607e-53	-8.615850e-47
Msa0524090	Msa1361910	0.814211	1.729574e-51	-8.615850e-47
Msa0524120	Msa1361910	0.808248	3.399915e-50	-8.615850e-47
Msa0528870	Msa1361910	0.816709	4.809327e-52	-8.615850e-47
Msa0532840	Msa1361910	0.829816	4.164846e-55	-8.615850e-47
Msa0533010	Msa1361910	0.826657	2.404932e-54	-8.615850e-47
Msa0534420	Msa1361910	0.805480	1.307918e-49	-8.615850e-47
Msa0538570	Msa1361910	0.830569	2.727818e-55	-8.615850e-47
Msa0542040	Msa1361910	0.808539	2.946998e-50	-8.615850e-47
Msa0546740	Msa1361910	0.855127	7.773018e-62	-8.615850e-47
Msa0547050	Msa1361910	0.813625	2.328341e-51	-8.615850e-47
Msa0560200	Msa1361910	0.808071	3.707682e-50	-8.615850e-47
Msa0561510	Msa1361910	0.842815	2.052895e-58	-8.615850e-47
Msa0576420	Msa1361910	0.811228	7.775153e-51	-8.615850e-47
Msa0587900	Msa1361910	0.828367	9.353833e-55	-8.615850e-47
Msa0589290	Msa1361910	0.816005	6.911890e-52	-8.615850e-47
Msa0594390	Msa1361910	0.825723	4.012951e-54	-8.615850e-47
Msa0598250	Msa1361910	0.819043	1.428849e-52	-8.615850e-47
Msa0600390	Msa1361910	0.828932	6.827898e-55	-8.615850e-47
Msa0844530	Msa1361910	0.809245	2.081711e-50	-8.615850e-47
Msa0848380	Msa1361910	0.801201	1.007043e-48	-8.615850e-47
Msa0851740	Msa1361910	0.821289	4.369751e-53	-8.615850e-47
Msa0852730	Msa1361910	0.800400	1.466922e-48	-8.615850e-47
Msa0859390	Msa1361910	0.804324	2.282063e-49	-8.615850e-47
Msa0922540	Msa1361910	0.802261	6.100111e-49	-8.615850e-47
Msa0925160	Msa1361910	0.811518	6.727499e-51	-8.615850e-47
Msa0931480	Msa1361910	0.830856	2.320222e-55	-8.615850e-47
Msa0934830	Msa1361910	0.804541	2.056064e-49	-8.615850e-47
Msa0950900	Msa1361910	0.803742	3.014687e-49	-8.615850e-47
Msa0951460	Msa1361910	0.806043	9.960596e-50	-8.615850e-47
Msa0951960	Msa1361910	0.801104	1.053790e-48	-8.615850e-47
Msa0955260	Msa1361910	0.823896	1.082126e-53	-8.615850e-47
Msa0958020	Msa1361910	0.864663	1.033881e-64	-8.615850e-47
Msa0964680	Msa1361910	0.803120	4.057373e-49	-8.615850e-47
Msa0971860	Msa1361910	0.824519	7.723865e-54	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1361910	MtrunA17_Chr7g0269961	95.312	128	5	1	1	127	1	128	3.00e-87	249
Msa1361910	MtrunA17_Chr1g0194671	64.615	130	41	3	2	127	3	131	4.43e-54	166

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1361910	AT3G62410.1	59.398	133	46	5	1	127	1	131	4.50e-45	143
Msa1361910	AT2G47400.1	68.041	97	27	2	33	127	30	124	4.40e-40	130
Msa1361910	AT1G76560.1	47.297	74	37	1	56	127	61	134	6.05e-19	77.0

Find 40 sgRNAs with CRISPR-Local

Find 41 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACCTTCTTTGATATCTGTTC+TGG	0.263996	tig0017690:-7928	None:intergenic
TGTTGTTGGTGAGATCTTGA+TGG	0.363034	tig0017690:-7836	None:intergenic
AAGCTTCTCTTCAACTCATC+AGG	0.395970	tig0017690:+7802	Msa1361910:CDS
GCTACGCATTCTCCACTAAC+CGG	0.412486	tig0017690:-7994	None:intergenic
GAAGAAGAAATGGCAACAAT+AGG	0.418272	tig0017690:+7757	None:intergenic
GATGAGTTGAAGAGAAGCTT+GGG	0.422285	tig0017690:-7799	None:intergenic
CACCATCATTCGACCTGATC+CGG	0.449625	tig0017690:-7884	None:intergenic
CGGTGGGGTGTAGCCGGATC+AGG	0.450264	tig0017690:+7871	Msa1361910:CDS
CGTGTCTGCAGTGGTGTTGT+TGG	0.454736	tig0017690:-7850	None:intergenic
GGTGAGATCTTGATGGTTTG+TGG	0.456742	tig0017690:-7829	None:intergenic
TGTTCTGGTGCAGCATGAAC+TGG	0.466575	tig0017690:-7913	None:intergenic
TGGAGAATGCGTAGCGGCAT+GGG	0.484341	tig0017690:+8002	Msa1361910:CDS
TGTGCTGATGACCCGGTTAG+TGG	0.494167	tig0017690:+7982	Msa1361910:CDS
GAAGAAGGATTCTGATCCAT+TGG	0.495582	tig0017690:+8071	Msa1361910:CDS
CGGCGAGTCATGCAAGGGAT+AGG	0.497910	tig0017690:+8049	Msa1361910:CDS
GTGGAGAATGCGTAGCGGCA+TGG	0.516210	tig0017690:+8001	Msa1361910:CDS
CAGACACGGTGGGGTGTAGC+CGG	0.517241	tig0017690:+7865	Msa1361910:CDS
TGATGAGTTGAAGAGAAGCT+TGG	0.520626	tig0017690:-7800	None:intergenic
AGAGAAGCTTGGGGTTTGAA+AGG	0.525586	tig0017690:-7789	None:intergenic
TCCATTGGAGGATTACTGTA+AGG	0.532128	tig0017690:+8086	Msa1361910:CDS
TCATGCAAGGGATAGGAAGA+AGG	0.572718	tig0017690:+8056	Msa1361910:CDS
ACCAGAACAGATATCAAAGA+AGG	0.574036	tig0017690:+7927	Msa1361910:CDS
AGAGACATGTGCTGATGACC+CGG	0.581174	tig0017690:+7975	Msa1361910:CDS
TCCTTACAGTAATCCTCCAA+TGG	0.581674	tig0017690:-8087	None:intergenic
AGCGGCATGGGACGAAGTGG+AGG	0.586526	tig0017690:+8014	Msa1361910:CDS
AGCCGGATCAGGTCGAATGA+TGG	0.587328	tig0017690:+7882	Msa1361910:CDS
CTACGCATTCTCCACTAACC+GGG	0.589171	tig0017690:-7993	None:intergenic
CAACAACACCACTGCAGACA+CGG	0.593172	tig0017690:+7851	Msa1361910:CDS
GAAGGATTCTGATCCATTGG+AGG	0.594880	tig0017690:+8074	Msa1361910:CDS
GAAGAAATGGCAACAATAGG+TGG	0.596013	tig0017690:+7760	None:intergenic
ACACCCCACCGTGTCTGCAG+TGG	0.598200	tig0017690:-7859	None:intergenic
AACACCACTGCAGACACGGT+GGG	0.598529	tig0017690:+7855	Msa1361910:CDS
CGTAGCGGCATGGGACGAAG+TGG	0.601693	tig0017690:+8011	Msa1361910:CDS
ACACCACTGCAGACACGGTG+GGG	0.612423	tig0017690:+7856	Msa1361910:CDS
CGGATCAGGTCGAATGATGG+TGG	0.612425	tig0017690:+7885	Msa1361910:CDS
TGCTGCGGCGAGTCATGCAA+GGG	0.625380	tig0017690:+8044	Msa1361910:CDS
CAACACCACTGCAGACACGG+TGG	0.673443	tig0017690:+7854	Msa1361910:CDS
ATGAGTTGAAGAGAAGCTTG+GGG	0.682917	tig0017690:-7798	None:intergenic
AGTGGAGGAACTCAGTGCTG+CGG	0.683881	tig0017690:+8029	Msa1361910:CDS
GGTTAGTGGAGAATGCGTAG+CGG	0.759059	tig0017690:+7996	Msa1361910:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	ACCAGAACAGATATCAAAGA+AGG	+	tig0017690:7927-7946	Msa1361910:CDS	35.0%
	ACCTTCTTTGATATCTGTTC+TGG	-	tig0017690:7931-7950	None:intergenic	35.0%
!	ATGAGTTGAAGAGAAGCTTG+GGG	-	tig0017690:7801-7820	None:intergenic	40.0%
!	GATGAGTTGAAGAGAAGCTT+GGG	-	tig0017690:7802-7821	None:intergenic	40.0%
!	TGATGAGTTGAAGAGAAGCT+TGG	-	tig0017690:7803-7822	None:intergenic	40.0%
	AAGCTTCTCTTCAACTCATC+AGG	+	tig0017690:7802-7821	Msa1361910:CDS	40.0%
!	TGTTGTTGGTGAGATCTTGA+TGG	-	tig0017690:7839-7858	None:intergenic	40.0%
	GAAGAAGGATTCTGATCCAT+TGG	+	tig0017690:8071-8090	Msa1361910:CDS	40.0%
	TCCATTGGAGGATTACTGTA+AGG	+	tig0017690:8086-8105	Msa1361910:CDS	40.0%
	TCCTTACAGTAATCCTCCAA+TGG	-	tig0017690:8090-8109	None:intergenic	40.0%
!	TTTTGCACTCATCAGTCTCA+GGG	-	tig0017690:8116-8135	None:intergenic	40.0%
	AGAGAAGCTTGGGGTTTGAA+AGG	-	tig0017690:7792-7811	None:intergenic	45.0%
!	GGTGAGATCTTGATGGTTTG+TGG	-	tig0017690:7832-7851	None:intergenic	45.0%
	TCATGCAAGGGATAGGAAGA+AGG	+	tig0017690:8056-8075	Msa1361910:CDS	45.0%
	GAAGGATTCTGATCCATTGG+AGG	+	tig0017690:8074-8093	Msa1361910:CDS	45.0%
!	GTTTTGCACTCATCAGTCTC+AGG	-	tig0017690:8117-8136	None:intergenic	45.0%
	CAACAACACCACTGCAGACA+CGG	+	tig0017690:7851-7870	Msa1361910:CDS	50.0%
	CACCATCATTCGACCTGATC+CGG	-	tig0017690:7887-7906	None:intergenic	50.0%
	TGTTCTGGTGCAGCATGAAC+TGG	-	tig0017690:7916-7935	None:intergenic	50.0%
!	AGAGACATGTGCTGATGACC+CGG	+	tig0017690:7975-7994	Msa1361910:CDS	50.0%
	CTACGCATTCTCCACTAACC+GGG	-	tig0017690:7996-8015	None:intergenic	50.0%
	GCTACGCATTCTCCACTAAC+CGG	-	tig0017690:7997-8016	None:intergenic	50.0%
	GGTTAGTGGAGAATGCGTAG+CGG	+	tig0017690:7996-8015	Msa1361910:CDS	50.0%
!!	CGTGTCTGCAGTGGTGTTGT+TGG	-	tig0017690:7853-7872	None:intergenic	55.0%
	AACACCACTGCAGACACGGT+GGG	+	tig0017690:7855-7874	Msa1361910:CDS	55.0%
	AGCCGGATCAGGTCGAATGA+TGG	+	tig0017690:7882-7901	Msa1361910:CDS	55.0%
	CGGATCAGGTCGAATGATGG+TGG	+	tig0017690:7885-7904	Msa1361910:CDS	55.0%
!	TGTGCTGATGACCCGGTTAG+TGG	+	tig0017690:7982-8001	Msa1361910:CDS	55.0%
	TGGAGAATGCGTAGCGGCAT+GGG	+	tig0017690:8002-8021	Msa1361910:CDS	55.0%
	AGTGGAGGAACTCAGTGCTG+CGG	+	tig0017690:8029-8048	Msa1361910:CDS	55.0%
	CAACACCACTGCAGACACGG+TGG	+	tig0017690:7854-7873	Msa1361910:CDS	60.0%
	ACACCACTGCAGACACGGTG+GGG	+	tig0017690:7856-7875	Msa1361910:CDS	60.0%
	GTGGAGAATGCGTAGCGGCA+TGG	+	tig0017690:8001-8020	Msa1361910:CDS	60.0%
	TGCTGCGGCGAGTCATGCAA+GGG	+	tig0017690:8044-8063	Msa1361910:CDS	60.0%
	CGGCGAGTCATGCAAGGGAT+AGG	+	tig0017690:8049-8068	Msa1361910:CDS	60.0%
	ACACCCCACCGTGTCTGCAG+TGG	-	tig0017690:7862-7881	None:intergenic	65.0%
	CAGACACGGTGGGGTGTAGC+CGG	+	tig0017690:7865-7884	Msa1361910:CDS	65.0%
	CGTAGCGGCATGGGACGAAG+TGG	+	tig0017690:8011-8030	Msa1361910:CDS	65.0%
	AGCGGCATGGGACGAAGTGG+AGG	+	tig0017690:8014-8033	Msa1361910:CDS	65.0%
	GTGCTGCGGCGAGTCATGCA+AGG	+	tig0017690:8043-8062	Msa1361910:CDS	65.0%
	CGGTGGGGTGTAGCCGGATC+AGG	+	tig0017690:7871-7890	Msa1361910:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
tig0017690	gene	7766	8149	7766	ID=Msa1361910;Name=Msa1361910
tig0017690	mRNA	7766	8149	7766	ID=Msa1361910-mRNA-1;Parent=Msa1361910;Name=Msa1361910-mRNA-1;_AED=0.01;_eAED=0.02;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|127
tig0017690	exon	7766	8149	7766	ID=Msa1361910-mRNA-1:exon:12710;Parent=Msa1361910-mRNA-1
tig0017690	CDS	7766	8149	7766	ID=Msa1361910-mRNA-1:cds;Parent=Msa1361910-mRNA-1

Gene Sequence

>Msa1361910

ATGGCAACAATAGGTGGTCTCAGCCTTTCAAACCCCAAGCTTCTCTTCAACTCATCAGGATTTCCACAAACCATCAAGATCTCACCAACAACACCACTGCAGACACGGTGGGGTGTAGCCGGATCAGGTCGAATGATGGTGGTTCGACCAGTTCATGCTGCACCAGAACAGATATCAAAGAAGGTAGAAGAAAGCATTAAGAGTGCGCAAGAGACATGTGCTGATGACCCGGTTAGTGGAGAATGCGTAGCGGCATGGGACGAAGTGGAGGAACTCAGTGCTGCGGCGAGTCATGCAAGGGATAGGAAGAAGGATTCTGATCCATTGGAGGATTACTGTAAGGATAACCCTGAGACTGATGAGTGCAAAACTTATGATAACTGA

Protein sequence

>Msa1361910

MATIGGLSLSNPKLLFNSSGFPQTIKISPTTPLQTRWGVAGSGRMMVVRPVHAAPEQISKKVEESIKSAQETCADDPVSGECVAAWDEVEELSAAASHARDRKKDSDPLEDYCKDNPETDECKTYDN*