AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0149270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0149270 MtrunA17_Chr1g0146771 96.615 709 24 0 1 709 1 709 0.0 1413
Msa0149270 MtrunA17_Chr3g0127171 62.397 726 228 14 1 707 1 700 0.0 853
Msa0149270 MtrunA17_Chr8g0388841 45.117 727 351 12 8 707 7 712 0.0 579
Msa0149270 MtrunA17_Chr8g0384061 36.257 684 327 18 50 709 47 645 1.48e-124 385
Msa0149270 MtrunA17_Chr2g0317931 41.493 576 260 17 196 709 298 858 6.23e-123 387
Msa0149270 MtrunA17_Chr3g0129821 44.742 485 236 11 233 709 168 628 4.49e-120 372
Msa0149270 MtrunA17_Chr7g0238321 46.917 373 187 6 234 595 394 766 2.08e-92 308
Msa0149270 MtrunA17_Chr1g0185501 27.119 236 152 8 338 566 48 270 2.32e-17 84.0
Msa0149270 MtrunA17_Chr4g0067151 26.482 253 152 9 251 487 19 253 2.96e-16 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0149270 AT5G24320.1 49.246 729 291 20 10 707 12 692 0.0 613
Msa0149270 AT5G24320.2 49.250 733 289 21 10 707 12 696 0.0 612
Msa0149270 AT5G53500.2 48.876 712 288 18 6 707 7 652 0.0 597
Msa0149270 AT5G53500.1 48.876 712 288 18 6 707 7 652 0.0 597
Msa0149270 AT5G42010.1 43.129 735 350 21 6 707 8 707 2.33e-165 493
Msa0149270 AT1G64610.2 48.381 525 224 12 191 707 160 645 7.28e-158 471
Msa0149270 AT1G64610.1 48.381 525 224 12 191 707 160 645 7.28e-158 471
Msa0149270 AT5G42010.2 52.589 367 165 5 186 548 189 550 1.93e-127 390
Msa0149270 AT5G54200.1 44.467 497 250 11 232 709 336 825 2.48e-124 390
Msa0149270 AT3G15470.1 40.497 563 277 11 194 709 332 883 6.85e-120 380
Msa0149270 AT1G48870.2 39.666 479 228 12 231 706 170 590 2.41e-98 315
Msa0149270 AT1G48870.3 39.666 479 228 12 231 706 170 590 2.41e-98 315
Msa0149270 AT1G48870.1 39.666 479 228 12 231 706 170 590 2.41e-98 315
Msa0149270 AT5G02430.1 39.768 518 263 11 232 706 384 895 1.60e-96 318
Msa0149270 AT2G37670.2 39.539 521 261 12 234 706 380 894 7.16e-93 308
Msa0149270 AT2G37670.1 39.539 521 261 12 234 706 379 893 7.71e-93 308
Msa0149270 AT3G49660.1 24.224 322 171 11 253 567 18 273 1.73e-18 87.4
Msa0149270 AT2G16405.1 22.881 236 166 4 348 567 199 434 4.79e-12 69.3

Find 227 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACACAACAACCATTCAAATT+TGG 0.091286 1_4:+9925207 Msa0149270:three_prime_UTR
AGCTTCCACTTTCGGATTTC+AGG 0.117373 1_4:+9924415 Msa0149270:three_prime_UTR
GGAATTGACACCCTTGTTTA+TGG 0.143018 1_4:+9922139 Msa0149270:CDS
GAGGGTTTGCTGAGAGATTT+TGG 0.182081 1_4:+9921315 Msa0149270:CDS
TTTATACAGGTAGGGATTAT+TGG 0.190663 1_4:+9922888 Msa0149270:intron
TCCATGAATTCTTCAGAATT+TGG 0.194639 1_4:+9921570 Msa0149270:CDS
CACAACAACCATTCAAATTT+GGG 0.196552 1_4:+9925208 Msa0149270:three_prime_UTR
AAGAGGAATAACCGGCTTTC+AGG 0.207009 1_4:+9923300 Msa0149270:CDS
GTATTTGTGGATTTAATTAT+TGG 0.219386 1_4:+9924824 Msa0149270:three_prime_UTR
TGGTCATGGAGGTGAAATTT+TGG 0.235145 1_4:+9922274 Msa0149270:CDS
CTTACATAGATGTTGTAATT+TGG 0.235674 1_4:-9920654 None:intergenic
CTTGAGGTGACCTCTTATTT+AGG 0.243028 1_4:-9923881 None:intergenic
CAGACAAATAGATTCTAAAT+TGG 0.258964 1_4:-9924856 None:intergenic
GGAACTTTCAGCTCTTTATA+TGG 0.266044 1_4:+9921926 Msa0149270:CDS
ATGAGTCTATTATCCATTCT+AGG 0.289743 1_4:-9924195 None:intergenic
TACTTGAACAGGTGCAGTTT+TGG 0.301743 1_4:+9924956 Msa0149270:three_prime_UTR
GTGTTTCATTCTCTGGTTGT+AGG 0.305208 1_4:+9921862 Msa0149270:CDS
TTCTTCAGAATTTGGTGCTT+TGG 0.317391 1_4:+9921578 Msa0149270:CDS
TTTGGATCGGTCAGTGGTTT+CGG 0.321548 1_4:+9921647 Msa0149270:CDS
ATACAGGATGTATCAACTTC+TGG 0.321898 1_4:-9922092 None:intergenic
AAAGTGGATGGAGTTGAGTT+TGG 0.323012 1_4:+9921395 Msa0149270:CDS
CGCATCTGTTGCAGTACCTT+GGG 0.326050 1_4:+9923812 Msa0149270:CDS
GGATAAGTTGCGGAACCTTT+CGG 0.326663 1_4:-9923966 None:intergenic
GAGAATGTTCCAATCTTTCA+TGG 0.333666 1_4:+9920570 Msa0149270:five_prime_UTR
CTTGTTTGAAGGTTATTTAA+TGG 0.334055 1_4:+9921155 Msa0149270:five_prime_UTR
AAATTAATAACTGTATAAAA+TGG 0.334182 1_4:+9925146 Msa0149270:three_prime_UTR
TTGATAAAACTGTTCGTCTA+TGG 0.334885 1_4:+9922465 Msa0149270:CDS
TCCTAAGGTCTTCCGGTTGA+TGG 0.338998 1_4:+9922229 Msa0149270:CDS
CTGATTGTCATGTTGTTGAT+TGG 0.342478 1_4:+9922741 Msa0149270:CDS
CAATCACAACTATGCTTACT+TGG 0.344066 1_4:+9923259 Msa0149270:CDS
GACAACCCTGAAGTTGATTC+TGG 0.347739 1_4:+9921279 Msa0149270:CDS
TGGTGCTTTGGTGGAGAATT+CGG 0.352335 1_4:+9921590 Msa0149270:CDS
TGATGGAGGGGAAGTAGGTT+TGG 0.352507 1_4:+9921629 Msa0149270:CDS
ATAAAATCATTCCACAATTA+CGG 0.355391 1_4:+9924137 Msa0149270:CDS
ACCAAATTCTGAAGAATTCA+TGG 0.356917 1_4:-9921571 None:intergenic
ACCAGTTACCAGCATGAGTT+TGG 0.360497 1_4:+9921702 Msa0149270:CDS
TTCATTAGCGGATCAATAGA+TGG 0.362082 1_4:+9922695 Msa0149270:CDS
GACACCCTTGTTTATGGATA+AGG 0.363962 1_4:+9922145 Msa0149270:CDS
ACATTAAGCTCGCTGCATTA+AGG 0.366523 1_4:-9923650 None:intergenic
AGTTGATTCTGGTCCTCCTT+TGG 0.373369 1_4:+9921290 Msa0149270:CDS
CGTTGTCCTTGGAAAATTGC+TGG 0.376834 1_4:+9924256 Msa0149270:three_prime_UTR
AAGTTTACTGTGAGATAAAA+TGG 0.377542 1_4:+9924792 Msa0149270:three_prime_UTR
GGAGGACCAGAATCAACTTC+AGG 0.378263 1_4:-9921285 None:intergenic
TTGTTTGAAGGTTATTTAAT+GGG 0.380231 1_4:+9921156 Msa0149270:five_prime_UTR
TGTGGATTTAATTATTGGTT+GGG 0.380495 1_4:+9924829 Msa0149270:three_prime_UTR
AACCTTGAGAATTCGGTAGA+TGG 0.380774 1_4:+9921426 Msa0149270:CDS
TAGATGGAAAAGTGCGCATA+TGG 0.387508 1_4:+9922711 Msa0149270:CDS
AGGAATGATGGAGGGGAAGT+AGG 0.387653 1_4:+9921624 Msa0149270:CDS
ACCAAACTCATGCTGGTAAC+TGG 0.395389 1_4:-9921703 None:intergenic
TTGCTTCGGCACGTTGTCCT+TGG 0.396941 1_4:+9924245 Msa0149270:three_prime_UTR
GAACTTTCAGCTCTTTATAT+GGG 0.405806 1_4:+9921927 Msa0149270:CDS
CAAATCCATAATTGAGGAAA+AGG 0.406650 1_4:-9924225 None:intergenic
CTTGCTAGTGCCGGCGAAGA+TGG 0.410754 1_4:+9922014 Msa0149270:CDS
CATATTCTTGTGTGAGGTAA+AGG 0.416027 1_4:-9924557 None:intergenic
CTTTATACCCCAAATTTGAA+TGG 0.421731 1_4:-9925216 None:intergenic
GAAGACGGTGTTTCATTCTC+TGG 0.423222 1_4:+9921855 Msa0149270:CDS
TTCTGGTCCTCCTTTGGTGG+AGG 0.423302 1_4:+9921296 Msa0149270:CDS
TTGTGGATTTAATTATTGGT+TGG 0.423828 1_4:+9924828 Msa0149270:three_prime_UTR
TGAATTGTGGACCAGGAGTC+CGG 0.426510 1_4:+9921341 Msa0149270:CDS
TCCATCAACCGGAAGACCTT+AGG 0.427294 1_4:-9922230 None:intergenic
CGCCGGCACTAGCAAGATAC+TGG 0.427472 1_4:-9922007 None:intergenic
TGATTCTGGTCCTCCTTTGG+TGG 0.429534 1_4:+9921293 Msa0149270:CDS
TTCAGAATTTGGTGCTTTGG+TGG 0.430345 1_4:+9921581 Msa0149270:CDS
TCTTCTGGAAGAGGAATAAC+CGG 0.432558 1_4:+9923292 Msa0149270:CDS
CTTCCAACCTCAGGCATTTG+AGG 0.434166 1_4:-9924909 None:intergenic
ATGGTCAATCCTACTTGAAC+AGG 0.434395 1_4:+9924945 Msa0149270:three_prime_UTR
TCTGGTCCTCCTTTGGTGGA+GGG 0.438960 1_4:+9921297 Msa0149270:CDS
GGTGAGGAGTTCGAGGGGTC+AGG 0.440150 1_4:+9921723 Msa0149270:CDS
AAACCACTTCATGAGTTTCA+TGG 0.440737 1_4:+9922254 Msa0149270:CDS
AACAAGGAGAATCTGATAAC+AGG 0.441398 1_4:+9921826 Msa0149270:CDS
GCTTCCACTTTCGGATTTCA+GGG 0.441836 1_4:+9924416 Msa0149270:three_prime_UTR
TTGTAGGATTCAGCGAGTTA+AGG 0.446374 1_4:+9921878 Msa0149270:CDS
CCTCAATTATGGATTTGCTT+CGG 0.447776 1_4:+9924231 Msa0149270:three_prime_UTR
AGAAATTATACCTGTCCATC+AGG 0.448537 1_4:-9922803 None:intergenic
ACCTTTGACTGCAGCCTGCT+CGG 0.454623 1_4:-9924339 None:intergenic
TAGACCCCATGCATGACAAT+TGG 0.455729 1_4:-9924084 None:intergenic
GAGGTTGGAAGGGTGATGAT+TGG 0.456034 1_4:+9924921 Msa0149270:three_prime_UTR
AGTAATCGTGACTGCTGGTT+GGG 0.456343 1_4:+9924106 Msa0149270:CDS
AAAATGGTCAAAAGATGTAA+TGG 0.457199 1_4:+9925162 Msa0149270:three_prime_UTR
TAGCTGATTGTTACAGCCTA+TGG 0.464034 1_4:+9925014 Msa0149270:three_prime_UTR
TGGTTAAGTGTTGCTTGTCT+TGG 0.464741 1_4:+9924518 Msa0149270:three_prime_UTR
GAAAGTGGTCTTTCCTAGAA+TGG 0.464886 1_4:+9924182 Msa0149270:three_prime_UTR
GTGCTATCGGCCTGATGGAC+AGG 0.466300 1_4:+9922793 Msa0149270:CDS
AGAATTCGGCATGCGAAGAT+AGG 0.469347 1_4:+9921604 Msa0149270:CDS
AAGCAGCAACCATGAAAGAT+TGG 0.475958 1_4:-9920579 None:intergenic
ATTCACCGTAAAATAAATAC+AGG 0.478244 1_4:-9922108 None:intergenic
AAAGACCACTTTCATTTCAA+AGG 0.478965 1_4:-9924172 None:intergenic
TTGTCACCGCGGTGTGCTAT+CGG 0.482103 1_4:+9922780 Msa0149270:CDS
GGGATTATTGGCTCCATGAC+AGG 0.482718 1_4:+9922900 Msa0149270:CDS
TACTTCCAATTGTCATGCAT+GGG 0.483434 1_4:+9924079 Msa0149270:CDS
AGGTTGGAAGGGTGATGATT+GGG 0.484257 1_4:+9924922 Msa0149270:three_prime_UTR
CTTCATGAGTTTCATGGTCA+TGG 0.484621 1_4:+9922260 Msa0149270:CDS
CAATCAACAACATGACAATC+AGG 0.489078 1_4:-9922740 None:intergenic
GAAGTGGTTTCTCCATCAAC+CGG 0.489392 1_4:-9922241 None:intergenic
CTCAAATGCCTGAGGTTGGA+AGG 0.489458 1_4:+9924910 Msa0149270:three_prime_UTR
CATATATCAGTACATGGAAA+AGG 0.490002 1_4:+9924605 Msa0149270:three_prime_UTR
ATAACTTTGTTAAAATCTTG+TGG 0.491780 1_4:-9923440 None:intergenic
CTTTCATTTCAAAGGAGTAC+AGG 0.491830 1_4:-9924164 None:intergenic
TTCCAACCTCAGGCATTTGA+GGG 0.492078 1_4:-9924908 None:intergenic
GATGATGATTATTTCATTAG+CGG 0.495396 1_4:+9922683 Msa0149270:CDS
ATCATCACCCTTCCAACCTC+AGG 0.495542 1_4:-9924918 None:intergenic
ACGCATCTGTTGCAGTACCT+TGG 0.499424 1_4:+9923811 Msa0149270:CDS
GATATTCATTCAAGAGGAAG+TGG 0.500151 1_4:+9924766 Msa0149270:three_prime_UTR
GTGAGATAAAATGGTGGTGG+GGG 0.500289 1_4:+9924801 Msa0149270:three_prime_UTR
GCTCCATGACAGGCAATTGT+CGG 0.502618 1_4:+9922910 Msa0149270:CDS
ATTGTGTGAAAGAGAGAGAG+AGG 0.508848 1_4:+9924731 Msa0149270:three_prime_UTR
GCAGTATTTGCTGTCATCGT+CGG 0.510836 1_4:+9922442 Msa0149270:intron
GAAGTAGGAAGTTTCTCCTC+GGG 0.512166 1_4:-9923987 None:intergenic
ATCGTGACTGCTGGTTGGGA+TGG 0.512730 1_4:+9924110 Msa0149270:CDS
GAGGACCAGAATCAACTTCA+GGG 0.513061 1_4:-9921284 None:intergenic
CTAGCAAGATACTGGCCGTC+CGG 0.518249 1_4:-9921999 None:intergenic
AAGATTGTGTCTTGAAAGTG+AGG 0.519750 1_4:-9920615 None:intergenic
CAAAGTCATATATCAGTACA+TGG 0.523365 1_4:+9924599 Msa0149270:three_prime_UTR
GTACTCCTTTGAAATGAAAG+TGG 0.524216 1_4:+9924167 Msa0149270:exon
TCAAATTCGACAGCATCAAA+AGG 0.527555 1_4:+9924312 Msa0149270:three_prime_UTR
GAGTAAGTTTATAAAGTGGA+TGG 0.528087 1_4:+9921383 Msa0149270:CDS
TGAGTTTGGTGAGGAGTTCG+AGG 0.530555 1_4:+9921716 Msa0149270:CDS
AATTGGATGTCCTAAATAAG+AGG 0.531200 1_4:+9923871 Msa0149270:CDS
GAATTGTGGACCAGGAGTCC+GGG 0.534742 1_4:+9921342 Msa0149270:CDS
ACTGTGAGATAAAATGGTGG+TGG 0.534754 1_4:+9924798 Msa0149270:three_prime_UTR
GAGATTAATAGAATGAAAGA+TGG 0.537127 1_4:+9921471 Msa0149270:CDS
TAGTAATCGTGACTGCTGGT+TGG 0.539202 1_4:+9924105 Msa0149270:CDS
GCATGCGAAGATAGGAATGA+TGG 0.540817 1_4:+9921612 Msa0149270:CDS
ATGAAATAATCATCATCCAC+AGG 0.541795 1_4:-9922677 None:intergenic
AATCCCCTGAAATCCGAAAG+TGG 0.541990 1_4:-9924420 None:intergenic
GTCCCTCAAATGCCTGAGGT+TGG 0.543855 1_4:+9924906 Msa0149270:three_prime_UTR
ACCGAGCAGGCTGCAGTCAA+AGG 0.543883 1_4:+9924338 Msa0149270:three_prime_UTR
TCTAACACTACCCGGACTCC+TGG 0.545596 1_4:-9921352 None:intergenic
TTCCATCTACCGAATTCTCA+AGG 0.548317 1_4:-9921428 None:intergenic
TCACAAGTCAGAATCATTGA+AGG 0.548563 1_4:+9923479 Msa0149270:CDS
GGCCAGTATCTTGCTAGTGC+CGG 0.549193 1_4:+9922005 Msa0149270:CDS
GTAGGAGTAAGTTTATAAAG+TGG 0.551153 1_4:+9921379 Msa0149270:CDS
AAACCGACAATTGCCTGTCA+TGG 0.552139 1_4:-9922913 None:intergenic
GTACTTCCAATTGTCATGCA+TGG 0.556893 1_4:+9924078 Msa0149270:CDS
TCGTGACTGCTGGTTGGGAT+GGG 0.557894 1_4:+9924111 Msa0149270:CDS
GCGGTGTGCTATCGGCCTGA+TGG 0.560905 1_4:+9922788 Msa0149270:CDS
TCAATGCAAGAAACAAAGAA+AGG 0.562391 1_4:+9921905 Msa0149270:CDS
TTACTCTTAGGGCTTGAAGT+AGG 0.562824 1_4:-9924002 None:intergenic
TGTGGAATGTTAGTGACGAC+GGG 0.565541 1_4:+9923736 Msa0149270:CDS
AACTGTTCGTCTATGGCAAG+TGG 0.567280 1_4:+9922472 Msa0149270:CDS
CTCAGCAAACCCTCCACCAA+AGG 0.567962 1_4:-9921306 None:intergenic
TAATCTTTCTATCCATCTCA+TGG 0.567987 1_4:+9924880 Msa0149270:three_prime_UTR
TTTATCCTTATCCATAAACA+AGG 0.568961 1_4:-9922150 None:intergenic
TTGTGTGAAAGAGAGAGAGA+GGG 0.569272 1_4:+9924732 Msa0149270:three_prime_UTR
CTGTGAGATAAAATGGTGGT+GGG 0.569280 1_4:+9924799 Msa0149270:three_prime_UTR
GGAAAAGATATTCATTCAAG+AGG 0.570215 1_4:+9924760 Msa0149270:three_prime_UTR
CATCAAAAGGATAACCGAGC+AGG 0.571167 1_4:+9924325 Msa0149270:three_prime_UTR
ACTCCTCACCAAACTCATGC+TGG 0.572712 1_4:-9921710 None:intergenic
GAGTTTGGTGAGGAGTTCGA+GGG 0.575150 1_4:+9921717 Msa0149270:CDS
CTTTCTATCCATCTCATGGT+AGG 0.575824 1_4:+9924884 Msa0149270:three_prime_UTR
TATTTGGATTCTATTCCGAA+AGG 0.577615 1_4:+9923951 Msa0149270:CDS
CTGTGGAATGTTAGTGACGA+CGG 0.578440 1_4:+9923735 Msa0149270:CDS
CTTCCACTTTCGGATTTCAG+GGG 0.578833 1_4:+9924417 Msa0149270:three_prime_UTR
AAGATGGAATTGTGCGATTG+TGG 0.579171 1_4:+9922030 Msa0149270:CDS
TTGGATATGAATTGTGGACC+AGG 0.579478 1_4:+9921334 Msa0149270:CDS
TGAAGTAGGAAGTTTCTCCT+CGG 0.582779 1_4:-9923988 None:intergenic
AGTAGGTTTGGATCGGTCAG+TGG 0.582988 1_4:+9921641 Msa0149270:CDS
AATATGCTGGCCCTTAAAAG+AGG 0.582994 1_4:+9924574 Msa0149270:three_prime_UTR
ATTAATAGAATGAAAGATGG+TGG 0.583671 1_4:+9921474 Msa0149270:CDS
CCGAAGCAAATCCATAATTG+AGG 0.584931 1_4:-9924231 None:intergenic
GTGTCAATCTCAGATGCAAA+TGG 0.586470 1_4:+9921249 Msa0149270:CDS
ATATACATTTGAGTCTTCAC+AGG 0.587540 1_4:-9923712 None:intergenic
TACCTCACACAAGAATATGC+TGG 0.587544 1_4:+9924561 Msa0149270:three_prime_UTR
GAATAAGAAGCACAATGGCT+AGG 0.588859 1_4:+9921181 Msa0149270:exon
AGATGGAAAAGTGCGCATAT+GGG 0.590347 1_4:+9922712 Msa0149270:CDS
CTACGCTCTCTAACACTACC+CGG 0.590841 1_4:-9921360 None:intergenic
GCGATTGTGGCAAGTTGTTG+AGG 0.591064 1_4:+9922043 Msa0149270:CDS
CACAAGTCAGAATCATTGAA+GGG 0.591839 1_4:+9923480 Msa0149270:CDS
ATCAACCGGAAGACCTTAGG+AGG 0.592224 1_4:-9922227 None:intergenic
ACTTATCAGTTCATGACAAG+TGG 0.592994 1_4:+9924449 Msa0149270:three_prime_UTR
TGCGAAGATAGGAATGATGG+AGG 0.593400 1_4:+9921615 Msa0149270:CDS
GCGAAGATAGGAATGATGGA+GGG 0.594651 1_4:+9921616 Msa0149270:CDS
CGGGTAGTGTTAGAGAGCGT+AGG 0.595315 1_4:+9921361 Msa0149270:CDS
TTGAGGGACCTACCATGAGA+TGG 0.596048 1_4:-9924892 None:intergenic
TCTGTTGCAGTACCTTGGGG+TGG 0.600067 1_4:+9923816 Msa0149270:CDS
GTTTGAGTCGTGGACAAAGA+GGG 0.600126 1_4:+9921749 Msa0149270:CDS
TTTCTCCTCGGGATAAGTTG+CGG 0.600952 1_4:-9923976 None:intergenic
GGATCAAGGCATACAGCTTG+AGG 0.601512 1_4:-9923897 None:intergenic
TCTGACTTGTGAATCAGCAC+AGG 0.603387 1_4:-9923468 None:intergenic
TCGCACAATTCCATCTTCGC+CGG 0.604000 1_4:-9922024 None:intergenic
TGAGATAAAATGGTGGTGGG+GGG 0.604223 1_4:+9924802 Msa0149270:three_prime_UTR
GTACAGGTAATCCGTAATTG+TGG 0.604825 1_4:-9924148 None:intergenic
CGAAGATAGGAATGATGGAG+GGG 0.608001 1_4:+9921617 Msa0149270:CDS
AGCAAACCCTCCACCAAAGG+AGG 0.608011 1_4:-9921303 None:intergenic
GGTCTAGTAATCGTGACTGC+TGG 0.608692 1_4:+9924101 Msa0149270:CDS
TGACCATGAAACTCATGAAG+TGG 0.609680 1_4:-9922257 None:intergenic
AAAACTGCACCTGTTCAAGT+AGG 0.610039 1_4:-9924954 None:intergenic
TCAAATGCCTGAGGTTGGAA+GGG 0.610065 1_4:+9924911 Msa0149270:three_prime_UTR
GTTTGAAAAGAACCGCTCGC+AGG 0.610721 1_4:-9923790 None:intergenic
ACAACAACCATTCAAATTTG+GGG 0.613858 1_4:+9925209 Msa0149270:three_prime_UTR
GCGTTCAATGACATGCATGA+TGG 0.613983 1_4:+9921797 Msa0149270:CDS
TGTGAGATAAAATGGTGGTG+GGG 0.615276 1_4:+9924800 Msa0149270:three_prime_UTR
TGAATCTGTGAACGCTGCTG+AGG 0.618609 1_4:+9921671 Msa0149270:CDS
ACTATGAAATTTAGTCCGGA+CGG 0.619533 1_4:+9921984 Msa0149270:CDS
TGTTTGAGTCGTGGACAAAG+AGG 0.619572 1_4:+9921748 Msa0149270:CDS
GATAACAGGAAGCACGAAGA+CGG 0.624901 1_4:+9921840 Msa0149270:CDS
AGTACTGTAGCAGTAGCCAT+AGG 0.629548 1_4:-9925030 None:intergenic
TTATCCTTATCCATAAACAA+GGG 0.630847 1_4:-9922149 None:intergenic
AAGACTCAAATGTATATCTG+TGG 0.633398 1_4:+9923718 Msa0149270:CDS
GACAAGTGGCTGCACGACCG+TGG 0.638852 1_4:+9924463 Msa0149270:three_prime_UTR
GAGGGGAAGTAGGTTTGGAT+CGG 0.639941 1_4:+9921634 Msa0149270:CDS
GGTCAGGTATGTTTGAGTCG+TGG 0.642486 1_4:+9921739 Msa0149270:CDS
GGCCAGCATATTCTTGTGTG+AGG 0.643577 1_4:-9924563 None:intergenic
TGTCTGTATATATAGTTTGG+GGG 0.647581 1_4:+9921085 Msa0149270:intron
GGCAAGTTGTTGAGGATGAG+AGG 0.647793 1_4:+9922051 Msa0149270:CDS
AGAGAGAAACACACACAGAG+AGG 0.648774 1_4:+9920539 Msa0149270:five_prime_UTR
TGTTGATTGGACTGATGTCA+AGG 0.649634 1_4:+9922754 Msa0149270:CDS
TCAGATTTCAAACCACCCCA+AGG 0.650854 1_4:-9923828 None:intergenic
ATGCATACAATTCAATCCTG+TGG 0.653407 1_4:+9922661 Msa0149270:CDS
ACTGTTCGTCTATGGCAAGT+GGG 0.654097 1_4:+9922473 Msa0149270:CDS
GCATCTGTTGCAGTACCTTG+GGG 0.656255 1_4:+9923813 Msa0149270:CDS
TTACCAGCATGAGTTTGGTG+AGG 0.658249 1_4:+9921707 Msa0149270:CDS
TGGAAGGGTGATGATTGGGA+TGG 0.670015 1_4:+9924926 Msa0149270:three_prime_UTR
CATGAGTTTCATGGTCATGG+AGG 0.673674 1_4:+9922263 Msa0149270:CDS
AGTAGTGTGAGCAAAAGTCA+TGG 0.676316 1_4:+9921498 Msa0149270:CDS
AGGTTCCGCAACTTATCCCG+AGG 0.678766 1_4:+9923971 Msa0149270:CDS
ACTTCCAATTGTCATGCATG+GGG 0.679789 1_4:+9924080 Msa0149270:CDS
GTAGGTCCCTCAAATGCCTG+AGG 0.680744 1_4:+9924902 Msa0149270:three_prime_UTR
GATGGATTACATTAGAACCA+CGG 0.693883 1_4:-9924480 None:intergenic
TTTACTGTGAGATAAAATGG+TGG 0.702614 1_4:+9924795 Msa0149270:three_prime_UTR
CAAGATATTCAAGCGCACGA+AGG 0.706142 1_4:+9921951 Msa0149270:CDS
GGGTTGAATAAGAAGCACAA+TGG 0.710264 1_4:+9921176 Msa0149270:exon
AGTTTGGTGAGGAGTTCGAG+GGG 0.714268 1_4:+9921718 Msa0149270:CDS
TGCATGATGGATGTACAACA+AGG 0.718046 1_4:+9921810 Msa0149270:CDS
AGAAGATTAAGTCCTGCGAG+CGG 0.742727 1_4:+9923778 Msa0149270:CDS
TGTCAAGGAAATTGTCACCG+CGG 0.767973 1_4:+9922769 Msa0149270:CDS
ATCAGGCCGATAGCACACCG+CGG 0.828542 1_4:-9922786 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTTTT+TGG - chr1_4:9924644-9924663 None:intergenic 0.0%
!! AAAAAAAAAAAAAAAAAAAA+AGG + chr1_4:9924644-9924663 Msa0149270:intron 0.0%
!!! CATTTCATATTTTAATTTTA+AGG + chr1_4:9923605-9923624 Msa0149270:intron 10.0%
!! AAATTAATAACTGTATAAAA+TGG + chr1_4:9925146-9925165 Msa0149270:three_prime_UTR 10.0%
!!! TTTTTAACGAAAATTCAAAA+GGG - chr1_4:9920787-9920806 None:intergenic 15.0%
!!! ATTTTTAACGAAAATTCAAA+AGG - chr1_4:9920788-9920807 None:intergenic 15.0%
!!! TGATTTTTGTGATAAAAAAT+TGG + chr1_4:9920910-9920929 Msa0149270:intron 15.0%
!!! GATTTTTGTGATAAAAAATT+GGG + chr1_4:9920911-9920930 Msa0149270:intron 15.0%
!! CTAAATTTCATAGTAAAAAT+TGG - chr1_4:9921978-9921997 None:intergenic 15.0%
!! TTCAAAATTGTATGAAAAAT+TGG + chr1_4:9922384-9922403 Msa0149270:intron 15.0%
!!! TACAGTTATTAATTTTACAA+AGG - chr1_4:9925141-9925160 None:intergenic 15.0%
!!! TTTTTAAGGTTTATTGAAGA+GGG - chr1_4:9920696-9920715 None:intergenic 20.0%
!!! ATTTTTAAGGTTTATTGAAG+AGG - chr1_4:9920697-9920716 None:intergenic 20.0%
!! TTTCGTTAAAAATATCTTGA+TGG + chr1_4:9920795-9920814 Msa0149270:intron 20.0%
!! TTCGTTAAAAATATCTTGAT+GGG + chr1_4:9920796-9920815 Msa0149270:intron 20.0%
!! TTGTTTGAAGGTTATTTAAT+GGG + chr1_4:9921156-9921175 Msa0149270:five_prime_UTR 20.0%
!!! TTTTACTATGAAATTTAGTC+CGG + chr1_4:9921980-9921999 Msa0149270:CDS 20.0%
!!! TACATCCTGTATTTATTTTA+CGG + chr1_4:9922103-9922122 Msa0149270:CDS 20.0%
!! TGAAAAATTGGAAATTGATT+TGG + chr1_4:9922396-9922415 Msa0149270:intron 20.0%
!! TAATTTCTTTACATTTCCTT+CGG + chr1_4:9922818-9922837 Msa0149270:intron 20.0%
!!! TGAATTTGTTTACTTTATAC+AGG + chr1_4:9922875-9922894 Msa0149270:intron 20.0%
!!! AAATTTGTTTTGTGAAAAGA+GGG + chr1_4:9923177-9923196 Msa0149270:intron 20.0%
!! ATAACTTTGTTAAAATCTTG+TGG - chr1_4:9923443-9923462 None:intergenic 20.0%
!!! ACAAGATTTTAACAAAGTTA+TGG + chr1_4:9923442-9923461 Msa0149270:CDS 20.0%
!!! CATCGAAAATTCTAAAAAAT+TGG + chr1_4:9923854-9923873 Msa0149270:CDS 20.0%
!! TAGAATCCAAATAAAAATCT+TGG - chr1_4:9923944-9923963 None:intergenic 20.0%
!! ATAAAATCATTCCACAATTA+CGG + chr1_4:9924137-9924156 Msa0149270:CDS 20.0%
!! GTATTTGTGGATTTAATTAT+TGG + chr1_4:9924824-9924843 Msa0149270:three_prime_UTR 20.0%
!!! AAAAGATGTAATGGAAAAAT+AGG + chr1_4:9925171-9925190 Msa0149270:three_prime_UTR 20.0%
!!! AAAGATGTAATGGAAAAATA+GGG + chr1_4:9925172-9925191 Msa0149270:three_prime_UTR 20.0%
! CTTACATAGATGTTGTAATT+TGG - chr1_4:9920657-9920676 None:intergenic 25.0%
! AAATGAAAATTGTACTTCGT+TGG - chr1_4:9920734-9920753 None:intergenic 25.0%
! TTGTGTCTGTATATATAGTT+TGG + chr1_4:9921082-9921101 Msa0149270:intron 25.0%
! TGTGTCTGTATATATAGTTT+GGG + chr1_4:9921083-9921102 Msa0149270:intron 25.0%
!! AAAAAATGTTGCTTGTTTGA+AGG + chr1_4:9921144-9921163 Msa0149270:five_prime_UTR 25.0%
! CTTGTTTGAAGGTTATTTAA+TGG + chr1_4:9921155-9921174 Msa0149270:five_prime_UTR 25.0%
! GAGATTAATAGAATGAAAGA+TGG + chr1_4:9921471-9921490 Msa0149270:CDS 25.0%
! ATTAATAGAATGAAAGATGG+TGG + chr1_4:9921474-9921493 Msa0149270:CDS 25.0%
! ATTCACCGTAAAATAAATAC+AGG - chr1_4:9922111-9922130 None:intergenic 25.0%
! TTATCCTTATCCATAAACAA+GGG - chr1_4:9922152-9922171 None:intergenic 25.0%
! TTTATCCTTATCCATAAACA+AGG - chr1_4:9922153-9922172 None:intergenic 25.0%
! TAGAATACATAAGAACAGAA+AGG - chr1_4:9922553-9922572 None:intergenic 25.0%
! GATGATGATTATTTCATTAG+CGG + chr1_4:9922683-9922702 Msa0149270:CDS 25.0%
! TTTGTTTACTTTATACAGGT+AGG + chr1_4:9922879-9922898 Msa0149270:intron 25.0%
! TTGTTTACTTTATACAGGTA+GGG + chr1_4:9922880-9922899 Msa0149270:intron 25.0%
! GAATGTTCTCAAACTATTAT+CGG + chr1_4:9923080-9923099 Msa0149270:intron 25.0%
!!! CAAATTTGTTTTGTGAAAAG+AGG + chr1_4:9923176-9923195 Msa0149270:intron 25.0%
! AAAAGAAAACAGAACTCAAT+TGG - chr1_4:9923358-9923377 None:intergenic 25.0%
! AAAAAAGAAGCTTCTATCTT+TGG - chr1_4:9923381-9923400 None:intergenic 25.0%
! AATGTCGTTGAAAAATTCAA+AGG + chr1_4:9923506-9923525 Msa0149270:CDS 25.0%
!!! GATTTCTATATTTTGTTGTC+AGG + chr1_4:9923627-9923646 Msa0149270:intron 25.0%
!! TCTAAGCCAAGATTTTTATT+TGG + chr1_4:9923935-9923954 Msa0149270:CDS 25.0%
!!! GTGAAGATTTTTTACTCTTA+GGG - chr1_4:9924016-9924035 None:intergenic 25.0%
!!! AGTGAAGATTTTTTACTCTT+AGG - chr1_4:9924017-9924036 None:intergenic 25.0%
!!! TTTTTTTTGGTACAACTGAT+GGG - chr1_4:9924632-9924651 None:intergenic 25.0%
!!! TTTTTTTTTGGTACAACTGA+TGG - chr1_4:9924633-9924652 None:intergenic 25.0%
! AAGTTTACTGTGAGATAAAA+TGG + chr1_4:9924792-9924811 Msa0149270:three_prime_UTR 25.0%
! TTGTGGATTTAATTATTGGT+TGG + chr1_4:9924828-9924847 Msa0149270:three_prime_UTR 25.0%
!! TGTGGATTTAATTATTGGTT+GGG + chr1_4:9924829-9924848 Msa0149270:three_prime_UTR 25.0%
! CAGACAAATAGATTCTAAAT+TGG - chr1_4:9924859-9924878 None:intergenic 25.0%
! AAAATGGTCAAAAGATGTAA+TGG + chr1_4:9925162-9925181 Msa0149270:three_prime_UTR 25.0%
!! AAGATGTAATGGAAAAATAG+GGG + chr1_4:9925173-9925192 Msa0149270:three_prime_UTR 25.0%
! CTTTTCGTGTTACAAAACAT+GGG + chr1_4:9920836-9920855 Msa0149270:intron 30.0%
TCATTGTTCTTTGTAAGACT+TGG + chr1_4:9920936-9920955 Msa0149270:intron 30.0%
! TTTGTAAGACTTGGTTCAAT+GGG + chr1_4:9920945-9920964 Msa0149270:intron 30.0%
GTGTCTGTATATATAGTTTG+GGG + chr1_4:9921084-9921103 Msa0149270:intron 30.0%
TGTCTGTATATATAGTTTGG+GGG + chr1_4:9921085-9921104 Msa0149270:intron 30.0%
!!! CAACATTTTTTCAAGCTAGT+GGG - chr1_4:9921135-9921154 None:intergenic 30.0%
! GAGATTTTGGATATGAATTG+TGG + chr1_4:9921328-9921347 Msa0149270:CDS 30.0%
GTAGGAGTAAGTTTATAAAG+TGG + chr1_4:9921379-9921398 Msa0149270:CDS 30.0%
GAGTAAGTTTATAAAGTGGA+TGG + chr1_4:9921383-9921402 Msa0149270:CDS 30.0%
TCAGAAAAACCTTGAGAATT+CGG + chr1_4:9921419-9921438 Msa0149270:CDS 30.0%
TCCATGAATTCTTCAGAATT+TGG + chr1_4:9921570-9921589 Msa0149270:CDS 30.0%
! ACCAAATTCTGAAGAATTCA+TGG - chr1_4:9921574-9921593 None:intergenic 30.0%
TCAATGCAAGAAACAAAGAA+AGG + chr1_4:9921905-9921924 Msa0149270:CDS 30.0%
GAACTTTCAGCTCTTTATAT+GGG + chr1_4:9921927-9921946 Msa0149270:CDS 30.0%
!! TGAATCTGATGTCTTTTTCA+GGG - chr1_4:9922192-9922211 None:intergenic 30.0%
TTGATAAAACTGTTCGTCTA+TGG + chr1_4:9922465-9922484 Msa0149270:CDS 30.0%
!!! CTAGCTTTAACTTCTTGTTT+TGG + chr1_4:9922581-9922600 Msa0149270:intron 30.0%
ATGAAATAATCATCATCCAC+AGG - chr1_4:9922680-9922699 None:intergenic 30.0%
GGAAGAAATGAAGATTCTAT+GGG + chr1_4:9922839-9922858 Msa0149270:intron 30.0%
TTTATACAGGTAGGGATTAT+TGG + chr1_4:9922888-9922907 Msa0149270:intron 30.0%
! AAAGAGGGATAATAACTTGT+TGG + chr1_4:9923192-9923211 Msa0149270:intron 30.0%
!! AAGAGGGATAATAACTTGTT+GGG + chr1_4:9923193-9923212 Msa0149270:intron 30.0%
CTTGGTAAAAAGAAATCTTC+TGG + chr1_4:9923277-9923296 Msa0149270:CDS 30.0%
! AAAAAGAAATCTTCTGGAAG+AGG + chr1_4:9923283-9923302 Msa0149270:CDS 30.0%
AAAAAACAATACCTGAAAGC+CGG - chr1_4:9923314-9923333 None:intergenic 30.0%
GAACTCAATTGGTGTAAAAA+AGG - chr1_4:9923347-9923366 None:intergenic 30.0%
GAACCAAAACCTTATAAAGT+GGG - chr1_4:9923546-9923565 None:intergenic 30.0%
TGAACCAAAACCTTATAAAG+TGG - chr1_4:9923547-9923566 None:intergenic 30.0%
! AATGTCTGCATCTTTTACTT+CGG + chr1_4:9923668-9923687 Msa0149270:CDS 30.0%
ATATACATTTGAGTCTTCAC+AGG - chr1_4:9923715-9923734 None:intergenic 30.0%
AAGACTCAAATGTATATCTG+TGG + chr1_4:9923718-9923737 Msa0149270:CDS 30.0%
!! CTTAATCTTCTTAGCTTTTG+TGG - chr1_4:9923769-9923788 None:intergenic 30.0%
AATTGGATGTCCTAAATAAG+AGG + chr1_4:9923871-9923890 Msa0149270:CDS 30.0%
TATTTGGATTCTATTCCGAA+AGG + chr1_4:9923951-9923970 Msa0149270:CDS 30.0%
AAAGACCACTTTCATTTCAA+AGG - chr1_4:9924175-9924194 None:intergenic 30.0%
ATGAGTCTATTATCCATTCT+AGG - chr1_4:9924198-9924217 None:intergenic 30.0%
CAAATCCATAATTGAGGAAA+AGG - chr1_4:9924228-9924247 None:intergenic 30.0%
CAAAGTCATATATCAGTACA+TGG + chr1_4:9924599-9924618 Msa0149270:three_prime_UTR 30.0%
CATATATCAGTACATGGAAA+AGG + chr1_4:9924605-9924624 Msa0149270:three_prime_UTR 30.0%
!!! TTTTTTTGGTACAACTGATG+GGG - chr1_4:9924631-9924650 None:intergenic 30.0%
! TTACAAAAGCATATCTGATG+GGG - chr1_4:9924684-9924703 None:intergenic 30.0%
! CTTACAAAAGCATATCTGAT+GGG - chr1_4:9924685-9924704 None:intergenic 30.0%
! TCTTACAAAAGCATATCTGA+TGG - chr1_4:9924686-9924705 None:intergenic 30.0%
GGAAAAGATATTCATTCAAG+AGG + chr1_4:9924760-9924779 Msa0149270:three_prime_UTR 30.0%
TTTACTGTGAGATAAAATGG+TGG + chr1_4:9924795-9924814 Msa0149270:three_prime_UTR 30.0%
TAATCTTTCTATCCATCTCA+TGG + chr1_4:9924880-9924899 Msa0149270:three_prime_UTR 30.0%
! CTGTGTATAGTCTCATTTTA+AGG + chr1_4:9925081-9925100 Msa0149270:three_prime_UTR 30.0%
GAGAATGTTCCAATCTTTCA+TGG + chr1_4:9920570-9920589 Msa0149270:five_prime_UTR 35.0%
AAGATTGTGTCTTGAAAGTG+AGG - chr1_4:9920618-9920637 None:intergenic 35.0%
TGAAGAGGGAAGAAAACATT+GGG - chr1_4:9920682-9920701 None:intergenic 35.0%
TTGAAGAGGGAAGAAAACAT+TGG - chr1_4:9920683-9920702 None:intergenic 35.0%
! CCATGTTTTGTAACACGAAA+AGG - chr1_4:9920838-9920857 None:intergenic 35.0%
! CCTTTTCGTGTTACAAAACA+TGG + chr1_4:9920835-9920854 Msa0149270:intron 35.0%
! CTTTGTAAGACTTGGTTCAA+TGG + chr1_4:9920944-9920963 Msa0149270:intron 35.0%
!! TTGGTTCAATGGGTTTTGAT+TGG + chr1_4:9920955-9920974 Msa0149270:intron 35.0%
!!! TGGTTCAATGGGTTTTGATT+GGG + chr1_4:9920956-9920975 Msa0149270:intron 35.0%
!!! GCAACATTTTTTCAAGCTAG+TGG - chr1_4:9921136-9921155 None:intergenic 35.0%
!! GAGCAAAAGTCATGGTTTTA+TGG + chr1_4:9921506-9921525 Msa0149270:CDS 35.0%
!!! CAAAAGTCATGGTTTTATGG+AGG + chr1_4:9921509-9921528 Msa0149270:CDS 35.0%
!!! TGGAGGATTTCTTTTCAAGT+CGG + chr1_4:9921526-9921545 Msa0149270:CDS 35.0%
!! TTCTTCAGAATTTGGTGCTT+TGG + chr1_4:9921578-9921597 Msa0149270:CDS 35.0%
CAAAGAGGGTTAAAAAGAGT+TGG + chr1_4:9921763-9921782 Msa0149270:CDS 35.0%
AACAAGGAGAATCTGATAAC+AGG + chr1_4:9921826-9921845 Msa0149270:CDS 35.0%
GGAACTTTCAGCTCTTTATA+TGG + chr1_4:9921926-9921945 Msa0149270:CDS 35.0%
ACTATGAAATTTAGTCCGGA+CGG + chr1_4:9921984-9922003 Msa0149270:CDS 35.0%
ATACAGGATGTATCAACTTC+TGG - chr1_4:9922095-9922114 None:intergenic 35.0%
! TTTTACGGTGAATGATCTCT+CGG + chr1_4:9922118-9922137 Msa0149270:CDS 35.0%
! CTGAATCTGATGTCTTTTTC+AGG - chr1_4:9922193-9922212 None:intergenic 35.0%
!! TTGCATCATTTTTCCTCCTA+AGG + chr1_4:9922214-9922233 Msa0149270:CDS 35.0%
AAACCACTTCATGAGTTTCA+TGG + chr1_4:9922254-9922273 Msa0149270:CDS 35.0%
! GTGAAATTTTGGATCTCTCT+TGG + chr1_4:9922285-9922304 Msa0149270:CDS 35.0%
! GTTTTCTCACACAGTAACTA+TGG + chr1_4:9922515-9922534 Msa0149270:CDS 35.0%
ATGCATACAATTCAATCCTG+TGG + chr1_4:9922661-9922680 Msa0149270:CDS 35.0%
! TTCATTAGCGGATCAATAGA+TGG + chr1_4:9922695-9922714 Msa0149270:CDS 35.0%
CAATCAACAACATGACAATC+AGG - chr1_4:9922743-9922762 None:intergenic 35.0%
CTGATTGTCATGTTGTTGAT+TGG + chr1_4:9922741-9922760 Msa0149270:CDS 35.0%
AGAAATTATACCTGTCCATC+AGG - chr1_4:9922806-9922825 None:intergenic 35.0%
AGAATCTTCATTTCTTCCGA+AGG - chr1_4:9922837-9922856 None:intergenic 35.0%
CGGAAGAAATGAAGATTCTA+TGG + chr1_4:9922838-9922857 Msa0149270:intron 35.0%
!!! TGTCGGTTTTACAATGTATC+AGG + chr1_4:9922927-9922946 Msa0149270:CDS 35.0%
ACACATCCAATATGAAGTAC+CGG - chr1_4:9923006-9923025 None:intergenic 35.0%
TTGAATGTTGAATGTCGTGT+CGG - chr1_4:9923055-9923074 None:intergenic 35.0%
!!! GTTGGGTTTGCTTTTGTTTT+TGG + chr1_4:9923210-9923229 Msa0149270:intron 35.0%
CAATCACAACTATGCTTACT+TGG + chr1_4:9923259-9923278 Msa0149270:CDS 35.0%
TCACAAGTCAGAATCATTGA+AGG + chr1_4:9923479-9923498 Msa0149270:CDS 35.0%
CACAAGTCAGAATCATTGAA+GGG + chr1_4:9923480-9923499 Msa0149270:CDS 35.0%
TGGCTTAGAGAAAAAGAAGA+CGG - chr1_4:9923924-9923943 None:intergenic 35.0%
TACTTCCAATTGTCATGCAT+GGG + chr1_4:9924079-9924098 Msa0149270:CDS 35.0%
! CTTTCATTTCAAAGGAGTAC+AGG - chr1_4:9924167-9924186 None:intergenic 35.0%
!! GTACTCCTTTGAAATGAAAG+TGG + chr1_4:9924167-9924186 Msa0149270:exon 35.0%
! AGTGTCCTTTTCCTCAATTA+TGG + chr1_4:9924220-9924239 Msa0149270:three_prime_UTR 35.0%
! CCTCAATTATGGATTTGCTT+CGG + chr1_4:9924231-9924250 Msa0149270:three_prime_UTR 35.0%
TCAAATTCGACAGCATCAAA+AGG + chr1_4:9924312-9924331 Msa0149270:three_prime_UTR 35.0%
!!! CGAAACTGCAGTCTTTTTTA+AGG - chr1_4:9924369-9924388 None:intergenic 35.0%
ACTTATCAGTTCATGACAAG+TGG + chr1_4:9924449-9924468 Msa0149270:three_prime_UTR 35.0%
!! GATGGATTACATTAGAACCA+CGG - chr1_4:9924483-9924502 None:intergenic 35.0%
!! CCACTTCTTCATTTTTCAGA+TGG - chr1_4:9924501-9924520 None:intergenic 35.0%
CCATCTGAAAAATGAAGAAG+TGG + chr1_4:9924498-9924517 Msa0149270:three_prime_UTR 35.0%
CATATTCTTGTGTGAGGTAA+AGG - chr1_4:9924560-9924579 None:intergenic 35.0%
! TGACTTTGCACCTCTTTTAA+GGG - chr1_4:9924587-9924606 None:intergenic 35.0%
! ATGACTTTGCACCTCTTTTA+AGG - chr1_4:9924588-9924607 None:intergenic 35.0%
! GCTTTTGTAAGACTCTTGTT+TGG + chr1_4:9924694-9924713 Msa0149270:three_prime_UTR 35.0%
GATATTCATTCAAGAGGAAG+TGG + chr1_4:9924766-9924785 Msa0149270:three_prime_UTR 35.0%
!!! GTATAGTCTCATTTTAAGGC+TGG + chr1_4:9925085-9925104 Msa0149270:three_prime_UTR 35.0%
AAGCAGCAACCATGAAAGAT+TGG - chr1_4:9920582-9920601 None:intergenic 40.0%
!!! GTTTTGATTGGGATCTCTGT+TGG + chr1_4:9920967-9920986 Msa0149270:intron 40.0%
! ATAGTTTGGGGGTGTAGATA+AGG + chr1_4:9921096-9921115 Msa0149270:intron 40.0%
! GGGTTGAATAAGAAGCACAA+TGG + chr1_4:9921176-9921195 Msa0149270:exon 40.0%
! GAATAAGAAGCACAATGGCT+AGG + chr1_4:9921181-9921200 Msa0149270:exon 40.0%
GTGTCAATCTCAGATGCAAA+TGG + chr1_4:9921249-9921268 Msa0149270:CDS 40.0%
TTGGATATGAATTGTGGACC+AGG + chr1_4:9921334-9921353 Msa0149270:CDS 40.0%
AAAGTGGATGGAGTTGAGTT+TGG + chr1_4:9921395-9921414 Msa0149270:CDS 40.0%
AACCTTGAGAATTCGGTAGA+TGG + chr1_4:9921426-9921445 Msa0149270:CDS 40.0%
TTCCATCTACCGAATTCTCA+AGG - chr1_4:9921431-9921450 None:intergenic 40.0%
AGTAGTGTGAGCAAAAGTCA+TGG + chr1_4:9921498-9921517 Msa0149270:CDS 40.0%
!! TTCAGAATTTGGTGCTTTGG+TGG + chr1_4:9921581-9921600 Msa0149270:CDS 40.0%
!! TGCATGATGGATGTACAACA+AGG + chr1_4:9921810-9921829 Msa0149270:CDS 40.0%
GTGTTTCATTCTCTGGTTGT+AGG + chr1_4:9921862-9921881 Msa0149270:CDS 40.0%
TTGTAGGATTCAGCGAGTTA+AGG + chr1_4:9921878-9921897 Msa0149270:CDS 40.0%
AAGATGGAATTGTGCGATTG+TGG + chr1_4:9922030-9922049 Msa0149270:CDS 40.0%
! GGAATTGACACCCTTGTTTA+TGG + chr1_4:9922139-9922158 Msa0149270:CDS 40.0%
! GACACCCTTGTTTATGGATA+AGG + chr1_4:9922145-9922164 Msa0149270:CDS 40.0%
! TTTTTCCTCCTAAGGTCTTC+CGG + chr1_4:9922222-9922241 Msa0149270:CDS 40.0%
TGACCATGAAACTCATGAAG+TGG - chr1_4:9922260-9922279 None:intergenic 40.0%
CTTCATGAGTTTCATGGTCA+TGG + chr1_4:9922260-9922279 Msa0149270:CDS 40.0%
! TGGTCATGGAGGTGAAATTT+TGG + chr1_4:9922274-9922293 Msa0149270:CDS 40.0%
!! ATAAGAACAGAAAGGCGTTG+AGG - chr1_4:9922545-9922564 None:intergenic 40.0%
! TAGATGGAAAAGTGCGCATA+TGG + chr1_4:9922711-9922730 Msa0149270:CDS 40.0%
! AGATGGAAAAGTGCGCATAT+GGG + chr1_4:9922712-9922731 Msa0149270:CDS 40.0%
! TGTTGATTGGACTGATGTCA+AGG + chr1_4:9922754-9922773 Msa0149270:CDS 40.0%
TTTATCTGCATGTGTAGCAC+CGG + chr1_4:9922984-9923003 Msa0149270:intron 40.0%
TTCAACTTACGTATCGTGTC+TGG + chr1_4:9923118-9923137 Msa0149270:intron 40.0%
! TCTTCTGGAAGAGGAATAAC+CGG + chr1_4:9923292-9923311 Msa0149270:CDS 40.0%
TGTTTCGCTCCCACTTTATA+AGG + chr1_4:9923534-9923553 Msa0149270:intron 40.0%
! GCTCCCACTTTATAAGGTTT+TGG + chr1_4:9923540-9923559 Msa0149270:intron 40.0%
ACATTAAGCTCGCTGCATTA+AGG - chr1_4:9923653-9923672 None:intergenic 40.0%
! TCTGCATCTTTTACTTCGGA+TGG + chr1_4:9923672-9923691 Msa0149270:CDS 40.0%
! CTTGAGGTGACCTCTTATTT+AGG - chr1_4:9923884-9923903 None:intergenic 40.0%
AAAAAGAAGACGGTGGATCA+AGG - chr1_4:9923914-9923933 None:intergenic 40.0%
CTTAGAGAAAAAGAAGACGG+TGG - chr1_4:9923921-9923940 None:intergenic 40.0%
TGAAGTAGGAAGTTTCTCCT+CGG - chr1_4:9923991-9924010 None:intergenic 40.0%
TTACTCTTAGGGCTTGAAGT+AGG - chr1_4:9924005-9924024 None:intergenic 40.0%
GTACTTCCAATTGTCATGCA+TGG + chr1_4:9924078-9924097 Msa0149270:CDS 40.0%
ACTTCCAATTGTCATGCATG+GGG + chr1_4:9924080-9924099 Msa0149270:CDS 40.0%
GTACAGGTAATCCGTAATTG+TGG - chr1_4:9924151-9924170 None:intergenic 40.0%
GAAAGTGGTCTTTCCTAGAA+TGG + chr1_4:9924182-9924201 Msa0149270:three_prime_UTR 40.0%
CCGAAGCAAATCCATAATTG+AGG - chr1_4:9924234-9924253 None:intergenic 40.0%
!! ACTTTTCGAGCTTCCACTTT+CGG + chr1_4:9924407-9924426 Msa0149270:three_prime_UTR 40.0%
!! TGGTTAAGTGTTGCTTGTCT+TGG + chr1_4:9924518-9924537 Msa0149270:three_prime_UTR 40.0%
TACCTCACACAAGAATATGC+TGG + chr1_4:9924561-9924580 Msa0149270:three_prime_UTR 40.0%
AATATGCTGGCCCTTAAAAG+AGG + chr1_4:9924574-9924593 Msa0149270:three_prime_UTR 40.0%
ATTGTGTGAAAGAGAGAGAG+AGG + chr1_4:9924731-9924750 Msa0149270:three_prime_UTR 40.0%
TTGTGTGAAAGAGAGAGAGA+GGG + chr1_4:9924732-9924751 Msa0149270:three_prime_UTR 40.0%
ACTGTGAGATAAAATGGTGG+TGG + chr1_4:9924798-9924817 Msa0149270:three_prime_UTR 40.0%
CTGTGAGATAAAATGGTGGT+GGG + chr1_4:9924799-9924818 Msa0149270:three_prime_UTR 40.0%
! TGTGAGATAAAATGGTGGTG+GGG + chr1_4:9924800-9924819 Msa0149270:three_prime_UTR 40.0%
CTTTCTATCCATCTCATGGT+AGG + chr1_4:9924884-9924903 Msa0149270:three_prime_UTR 40.0%
ATGGTCAATCCTACTTGAAC+AGG + chr1_4:9924945-9924964 Msa0149270:three_prime_UTR 40.0%
AAAACTGCACCTGTTCAAGT+AGG - chr1_4:9924957-9924976 None:intergenic 40.0%
! TACTTGAACAGGTGCAGTTT+TGG + chr1_4:9924956-9924975 Msa0149270:three_prime_UTR 40.0%
TAGCTGATTGTTACAGCCTA+TGG + chr1_4:9925014-9925033 Msa0149270:three_prime_UTR 40.0%
AGAGAGAAACACACACAGAG+AGG + chr1_4:9920539-9920558 Msa0149270:five_prime_UTR 45.0%
! GACAACCCTGAAGTTGATTC+TGG + chr1_4:9921279-9921298 Msa0149270:CDS 45.0%
GAGGACCAGAATCAACTTCA+GGG - chr1_4:9921287-9921306 None:intergenic 45.0%
! AGTTGATTCTGGTCCTCCTT+TGG + chr1_4:9921290-9921309 Msa0149270:CDS 45.0%
!!! GAGGGTTTGCTGAGAGATTT+TGG + chr1_4:9921315-9921334 Msa0149270:CDS 45.0%
TGGTGCTTTGGTGGAGAATT+CGG + chr1_4:9921590-9921609 Msa0149270:CDS 45.0%
AGAATTCGGCATGCGAAGAT+AGG + chr1_4:9921604-9921623 Msa0149270:CDS 45.0%
GCATGCGAAGATAGGAATGA+TGG + chr1_4:9921612-9921631 Msa0149270:CDS 45.0%
TGCGAAGATAGGAATGATGG+AGG + chr1_4:9921615-9921634 Msa0149270:CDS 45.0%
! GCGAAGATAGGAATGATGGA+GGG + chr1_4:9921616-9921635 Msa0149270:CDS 45.0%
! CGAAGATAGGAATGATGGAG+GGG + chr1_4:9921617-9921636 Msa0149270:CDS 45.0%
TTTGGATCGGTCAGTGGTTT+CGG + chr1_4:9921647-9921666 Msa0149270:CDS 45.0%
ACCAGTTACCAGCATGAGTT+TGG + chr1_4:9921702-9921721 Msa0149270:CDS 45.0%
ACCAAACTCATGCTGGTAAC+TGG - chr1_4:9921706-9921725 None:intergenic 45.0%
! TTACCAGCATGAGTTTGGTG+AGG + chr1_4:9921707-9921726 Msa0149270:CDS 45.0%
TGTTTGAGTCGTGGACAAAG+AGG + chr1_4:9921748-9921767 Msa0149270:CDS 45.0%
GTTTGAGTCGTGGACAAAGA+GGG + chr1_4:9921749-9921768 Msa0149270:CDS 45.0%
GCGTTCAATGACATGCATGA+TGG + chr1_4:9921797-9921816 Msa0149270:CDS 45.0%
! GATAACAGGAAGCACGAAGA+CGG + chr1_4:9921840-9921859 Msa0149270:CDS 45.0%
GAAGACGGTGTTTCATTCTC+TGG + chr1_4:9921855-9921874 Msa0149270:CDS 45.0%
CAAGATATTCAAGCGCACGA+AGG + chr1_4:9921951-9921970 Msa0149270:CDS 45.0%
GAAGTGGTTTCTCCATCAAC+CGG - chr1_4:9922244-9922263 None:intergenic 45.0%
CATGAGTTTCATGGTCATGG+AGG + chr1_4:9922263-9922282 Msa0149270:CDS 45.0%
!! GCAGTATTTGCTGTCATCGT+CGG + chr1_4:9922442-9922461 Msa0149270:intron 45.0%
AACTGTTCGTCTATGGCAAG+TGG + chr1_4:9922472-9922491 Msa0149270:CDS 45.0%
ACTGTTCGTCTATGGCAAGT+GGG + chr1_4:9922473-9922492 Msa0149270:CDS 45.0%
TGTCAAGGAAATTGTCACCG+CGG + chr1_4:9922769-9922788 Msa0149270:CDS 45.0%
AAACCGACAATTGCCTGTCA+TGG - chr1_4:9922916-9922935 None:intergenic 45.0%
! GGTGCTACACATGCAGATAA+AGG - chr1_4:9922985-9923004 None:intergenic 45.0%
!! GTAGCACCGGTACTTCATAT+TGG + chr1_4:9922997-9923016 Msa0149270:intron 45.0%
! AAGAGGAATAACCGGCTTTC+AGG + chr1_4:9923300-9923319 Msa0149270:CDS 45.0%
! TCTGACTTGTGAATCAGCAC+AGG - chr1_4:9923471-9923490 None:intergenic 45.0%
CTGTGGAATGTTAGTGACGA+CGG + chr1_4:9923735-9923754 Msa0149270:CDS 45.0%
TGTGGAATGTTAGTGACGAC+GGG + chr1_4:9923736-9923755 Msa0149270:CDS 45.0%
AGAAGATTAAGTCCTGCGAG+CGG + chr1_4:9923778-9923797 Msa0149270:CDS 45.0%
TCAGATTTCAAACCACCCCA+AGG - chr1_4:9923831-9923850 None:intergenic 45.0%
GGATAAGTTGCGGAACCTTT+CGG - chr1_4:9923969-9923988 None:intergenic 45.0%
TTTCTCCTCGGGATAAGTTG+CGG - chr1_4:9923979-9923998 None:intergenic 45.0%
GAAGTAGGAAGTTTCTCCTC+GGG - chr1_4:9923990-9924009 None:intergenic 45.0%
TAGACCCCATGCATGACAAT+TGG - chr1_4:9924087-9924106 None:intergenic 45.0%
TAGTAATCGTGACTGCTGGT+TGG + chr1_4:9924105-9924124 Msa0149270:CDS 45.0%
! AGTAATCGTGACTGCTGGTT+GGG + chr1_4:9924106-9924125 Msa0149270:CDS 45.0%
CGTTGTCCTTGGAAAATTGC+TGG + chr1_4:9924256-9924275 Msa0149270:three_prime_UTR 45.0%
! TAGCAGCCAGCAATTTTCCA+AGG - chr1_4:9924265-9924284 None:intergenic 45.0%
CATCAAAAGGATAACCGAGC+AGG + chr1_4:9924325-9924344 Msa0149270:three_prime_UTR 45.0%
AGCTTCCACTTTCGGATTTC+AGG + chr1_4:9924415-9924434 Msa0149270:three_prime_UTR 45.0%
GCTTCCACTTTCGGATTTCA+GGG + chr1_4:9924416-9924435 Msa0149270:three_prime_UTR 45.0%
CTTCCACTTTCGGATTTCAG+GGG + chr1_4:9924417-9924436 Msa0149270:three_prime_UTR 45.0%
AATCCCCTGAAATCCGAAAG+TGG - chr1_4:9924423-9924442 None:intergenic 45.0%
!! GTGAGATAAAATGGTGGTGG+GGG + chr1_4:9924801-9924820 Msa0149270:three_prime_UTR 45.0%
!! TGAGATAAAATGGTGGTGGG+GGG + chr1_4:9924802-9924821 Msa0149270:three_prime_UTR 45.0%
TTCCAACCTCAGGCATTTGA+GGG - chr1_4:9924911-9924930 None:intergenic 45.0%
TCAAATGCCTGAGGTTGGAA+GGG + chr1_4:9924911-9924930 Msa0149270:three_prime_UTR 45.0%
AGGTTGGAAGGGTGATGATT+GGG + chr1_4:9924922-9924941 Msa0149270:three_prime_UTR 45.0%
AGTACTGTAGCAGTAGCCAT+AGG - chr1_4:9925033-9925052 None:intergenic 45.0%
!!! ATAAAAAAAAAACATTTTTA+AGG - chr1_4:9920710-9920729 None:intergenic 5.0%
GGGATCTCTGTTGGATCTCT+TGG + chr1_4:9920976-9920995 Msa0149270:intron 50.0%
GGAGGACCAGAATCAACTTC+AGG - chr1_4:9921288-9921307 None:intergenic 50.0%
TGATTCTGGTCCTCCTTTGG+TGG + chr1_4:9921293-9921312 Msa0149270:CDS 50.0%
TGAATTGTGGACCAGGAGTC+CGG + chr1_4:9921341-9921360 Msa0149270:CDS 50.0%
CTACGCTCTCTAACACTACC+CGG - chr1_4:9921363-9921382 None:intergenic 50.0%
! AGGAATGATGGAGGGGAAGT+AGG + chr1_4:9921624-9921643 Msa0149270:CDS 50.0%
TGATGGAGGGGAAGTAGGTT+TGG + chr1_4:9921629-9921648 Msa0149270:CDS 50.0%
GAGGGGAAGTAGGTTTGGAT+CGG + chr1_4:9921634-9921653 Msa0149270:CDS 50.0%
AGTAGGTTTGGATCGGTCAG+TGG + chr1_4:9921641-9921660 Msa0149270:CDS 50.0%
TGAATCTGTGAACGCTGCTG+AGG + chr1_4:9921671-9921690 Msa0149270:CDS 50.0%
ACTCCTCACCAAACTCATGC+TGG - chr1_4:9921713-9921732 None:intergenic 50.0%
! TGAGTTTGGTGAGGAGTTCG+AGG + chr1_4:9921716-9921735 Msa0149270:CDS 50.0%
! GAGTTTGGTGAGGAGTTCGA+GGG + chr1_4:9921717-9921736 Msa0149270:CDS 50.0%
! AGTTTGGTGAGGAGTTCGAG+GGG + chr1_4:9921718-9921737 Msa0149270:CDS 50.0%
GGTCAGGTATGTTTGAGTCG+TGG + chr1_4:9921739-9921758 Msa0149270:CDS 50.0%
TCGCACAATTCCATCTTCGC+CGG - chr1_4:9922027-9922046 None:intergenic 50.0%
GCGATTGTGGCAAGTTGTTG+AGG + chr1_4:9922043-9922062 Msa0149270:CDS 50.0%
GGCAAGTTGTTGAGGATGAG+AGG + chr1_4:9922051-9922070 Msa0149270:CDS 50.0%
ATCAACCGGAAGACCTTAGG+AGG - chr1_4:9922230-9922249 None:intergenic 50.0%
TCCTAAGGTCTTCCGGTTGA+TGG + chr1_4:9922229-9922248 Msa0149270:CDS 50.0%
TCCATCAACCGGAAGACCTT+AGG - chr1_4:9922233-9922252 None:intergenic 50.0%
!! GGGATTATTGGCTCCATGAC+AGG + chr1_4:9922900-9922919 Msa0149270:CDS 50.0%
GCTCCATGACAGGCAATTGT+CGG + chr1_4:9922910-9922929 Msa0149270:CDS 50.0%
GTTTGAAAAGAACCGCTCGC+AGG - chr1_4:9923793-9923812 None:intergenic 50.0%
ACGCATCTGTTGCAGTACCT+TGG + chr1_4:9923811-9923830 Msa0149270:CDS 50.0%
CGCATCTGTTGCAGTACCTT+GGG + chr1_4:9923812-9923831 Msa0149270:CDS 50.0%
GCATCTGTTGCAGTACCTTG+GGG + chr1_4:9923813-9923832 Msa0149270:CDS 50.0%
GGATCAAGGCATACAGCTTG+AGG - chr1_4:9923900-9923919 None:intergenic 50.0%
GGTCTAGTAATCGTGACTGC+TGG + chr1_4:9924101-9924120 Msa0149270:CDS 50.0%
GGCCAGCATATTCTTGTGTG+AGG - chr1_4:9924566-9924585 None:intergenic 50.0%
AAAGAGAGAGAGAGGGAGAG+AGG + chr1_4:9924739-9924758 Msa0149270:three_prime_UTR 50.0%
TTGAGGGACCTACCATGAGA+TGG - chr1_4:9924895-9924914 None:intergenic 50.0%
CTTCCAACCTCAGGCATTTG+AGG - chr1_4:9924912-9924931 None:intergenic 50.0%
CTCAAATGCCTGAGGTTGGA+AGG + chr1_4:9924910-9924929 Msa0149270:three_prime_UTR 50.0%
ATCATCACCCTTCCAACCTC+AGG - chr1_4:9924921-9924940 None:intergenic 50.0%
GAGGTTGGAAGGGTGATGAT+TGG + chr1_4:9924921-9924940 Msa0149270:three_prime_UTR 50.0%
TGGAAGGGTGATGATTGGGA+TGG + chr1_4:9924926-9924945 Msa0149270:three_prime_UTR 50.0%
TTCTGGTCCTCCTTTGGTGG+AGG + chr1_4:9921296-9921315 Msa0149270:CDS 55.0%
TCTGGTCCTCCTTTGGTGGA+GGG + chr1_4:9921297-9921316 Msa0149270:CDS 55.0%
AGCAAACCCTCCACCAAAGG+AGG - chr1_4:9921306-9921325 None:intergenic 55.0%
CTCAGCAAACCCTCCACCAA+AGG - chr1_4:9921309-9921328 None:intergenic 55.0%
GAATTGTGGACCAGGAGTCC+GGG + chr1_4:9921342-9921361 Msa0149270:CDS 55.0%
TCTAACACTACCCGGACTCC+TGG - chr1_4:9921355-9921374 None:intergenic 55.0%
! CGGGTAGTGTTAGAGAGCGT+AGG + chr1_4:9921361-9921380 Msa0149270:CDS 55.0%
CTAGCAAGATACTGGCCGTC+CGG - chr1_4:9922002-9922021 None:intergenic 55.0%
GGCCAGTATCTTGCTAGTGC+CGG + chr1_4:9922005-9922024 Msa0149270:CDS 55.0%
TTGTCACCGCGGTGTGCTAT+CGG + chr1_4:9922780-9922799 Msa0149270:CDS 55.0%
TGTCGGACACTGACACAGGT+GGG - chr1_4:9923038-9923057 None:intergenic 55.0%
TCTGTTGCAGTACCTTGGGG+TGG + chr1_4:9923816-9923835 Msa0149270:CDS 55.0%
AGGTTCCGCAACTTATCCCG+AGG + chr1_4:9923971-9923990 Msa0149270:CDS 55.0%
! ATCGTGACTGCTGGTTGGGA+TGG + chr1_4:9924110-9924129 Msa0149270:CDS 55.0%
! TCGTGACTGCTGGTTGGGAT+GGG + chr1_4:9924111-9924130 Msa0149270:CDS 55.0%
TTGCTTCGGCACGTTGTCCT+TGG + chr1_4:9924245-9924264 Msa0149270:three_prime_UTR 55.0%
ACCTTTGACTGCAGCCTGCT+CGG - chr1_4:9924342-9924361 None:intergenic 55.0%
!! ATGGTGGTGGGGGGTATTTG+TGG + chr1_4:9924811-9924830 Msa0149270:three_prime_UTR 55.0%
GTAGGTCCCTCAAATGCCTG+AGG + chr1_4:9924902-9924921 Msa0149270:three_prime_UTR 55.0%
GTCCCTCAAATGCCTGAGGT+TGG + chr1_4:9924906-9924925 Msa0149270:three_prime_UTR 55.0%
CGCCGGCACTAGCAAGATAC+TGG - chr1_4:9922010-9922029 None:intergenic 60.0%
!! CTTGCTAGTGCCGGCGAAGA+TGG + chr1_4:9922014-9922033 Msa0149270:CDS 60.0%
ATCAGGCCGATAGCACACCG+CGG - chr1_4:9922789-9922808 None:intergenic 60.0%
! GTGCTATCGGCCTGATGGAC+AGG + chr1_4:9922793-9922812 Msa0149270:CDS 60.0%
GTGTCGGACACTGACACAGG+TGG - chr1_4:9923039-9923058 None:intergenic 60.0%
GTCGTGTCGGACACTGACAC+AGG - chr1_4:9923042-9923061 None:intergenic 60.0%
ACCGAGCAGGCTGCAGTCAA+AGG + chr1_4:9924338-9924357 Msa0149270:three_prime_UTR 60.0%
GGTGAGGAGTTCGAGGGGTC+AGG + chr1_4:9921723-9921742 Msa0149270:CDS 65.0%
GCGGTGTGCTATCGGCCTGA+TGG + chr1_4:9922788-9922807 Msa0149270:CDS 65.0%
GACAAGTGGCTGCACGACCG+TGG + chr1_4:9924463-9924482 Msa0149270:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 9920519 9925229 9920519 ID=Msa0149270;Name=Msa0149270
chr1_4 mRNA 9920519 9925229 9920519 ID=Msa0149270-mRNA-1;Parent=Msa0149270;Name=Msa0149270-mRNA-1;_AED=0.05;_eAED=0.05;_QI=248|1|1|1|0.75|0.55|9|998|709
chr1_4 exon 9920519 9920671 9920519 ID=Msa0149270-mRNA-1:exon:4234;Parent=Msa0149270-mRNA-1
chr1_4 exon 9921100 9922319 9921100 ID=Msa0149270-mRNA-1:exon:4235;Parent=Msa0149270-mRNA-1
chr1_4 exon 9922446 9922536 9922446 ID=Msa0149270-mRNA-1:exon:4236;Parent=Msa0149270-mRNA-1
chr1_4 exon 9922657 9922814 9922657 ID=Msa0149270-mRNA-1:exon:4237;Parent=Msa0149270-mRNA-1
chr1_4 exon 9922897 9922948 9922897 ID=Msa0149270-mRNA-1:exon:4238;Parent=Msa0149270-mRNA-1
chr1_4 exon 9923242 9923321 9923242 ID=Msa0149270-mRNA-1:exon:4239;Parent=Msa0149270-mRNA-1
chr1_4 exon 9923434 9923527 9923434 ID=Msa0149270-mRNA-1:exon:4240;Parent=Msa0149270-mRNA-1
chr1_4 exon 9923649 9924636 9923649 ID=Msa0149270-mRNA-1:exon:4241;Parent=Msa0149270-mRNA-1
chr1_4 exon 9924690 9925229 9924690 ID=Msa0149270-mRNA-1:exon:4242;Parent=Msa0149270-mRNA-1
chr1_4 five_prime_UTR 9920519 9920671 9920519 ID=Msa0149270-mRNA-1:five_prime_utr;Parent=Msa0149270-mRNA-1
chr1_4 five_prime_UTR 9921100 9921194 9921100 ID=Msa0149270-mRNA-1:five_prime_utr;Parent=Msa0149270-mRNA-1
chr1_4 CDS 9921195 9922319 9921195 ID=Msa0149270-mRNA-1:cds;Parent=Msa0149270-mRNA-1
chr1_4 CDS 9922446 9922536 9922446 ID=Msa0149270-mRNA-1:cds;Parent=Msa0149270-mRNA-1
chr1_4 CDS 9922657 9922814 9922657 ID=Msa0149270-mRNA-1:cds;Parent=Msa0149270-mRNA-1
chr1_4 CDS 9922897 9922948 9922897 ID=Msa0149270-mRNA-1:cds;Parent=Msa0149270-mRNA-1
chr1_4 CDS 9923242 9923321 9923242 ID=Msa0149270-mRNA-1:cds;Parent=Msa0149270-mRNA-1
chr1_4 CDS 9923434 9923527 9923434 ID=Msa0149270-mRNA-1:cds;Parent=Msa0149270-mRNA-1
chr1_4 CDS 9923649 9924178 9923649 ID=Msa0149270-mRNA-1:cds;Parent=Msa0149270-mRNA-1
chr1_4 three_prime_UTR 9924179 9924636 9924179 ID=Msa0149270-mRNA-1:three_prime_utr;Parent=Msa0149270-mRNA-1
chr1_4 three_prime_UTR 9924690 9925229 9924690 ID=Msa0149270-mRNA-1:three_prime_utr;Parent=Msa0149270-mRNA-1
Gene Sequence

>Msa0149270

ATGGCTAGGTTCAGCGAAGAAGAAGTTCAATTTTTTGATGCTCAAGATGATATTGTGTCAATCTCAGATGCAAATGGTGTTGCTGACAACCCTGAAGTTGATTCTGGTCCTCCTTTGGTGGAGGGTTTGCTGAGAGATTTTGGATATGAATTGTGGACCAGGAGTCCGGGTAGTGTTAGAGAGCGTAGGAGTAAGTTTATAAAGTGGATGGAGTTGAGTTTGGATCAGAAAAACCTTGAGAATTCGGTAGATGGAAGTAGTTATGAAAGAGAAGATGAGATTAATAGAATGAAAGATGGTGGCAGTAGTGTGAGCAAAAGTCATGGTTTTATGGAGGATTTCTTTTCAAGTCGGTTATCGATGTCTTGTTTGTCTTCCATGAATTCTTCAGAATTTGGTGCTTTGGTGGAGAATTCGGCATGCGAAGATAGGAATGATGGAGGGGAAGTAGGTTTGGATCGGTCAGTGGTTTCGGATGAATCTGTGAACGCTGCTGAGGTGTCTTCTACCAGTTACCAGCATGAGTTTGGTGAGGAGTTCGAGGGGTCAGGTATGTTTGAGTCGTGGACAAAGAGGGTTAAAAAGAGTTGGTTAAGAAAATTGCGTTCAATGACATGCATGATGGATGTACAACAAGGAGAATCTGATAACAGGAAGCACGAAGACGGTGTTTCATTCTCTGGTTGTAGGATTCAGCGAGTTAAGGTTCGTCAATGCAAGAAACAAAGAAAGGAACTTTCAGCTCTTTATATGGGACAAGATATTCAAGCGCACGAAGGTCCAATTTTTACTATGAAATTTAGTCCGGACGGCCAGTATCTTGCTAGTGCCGGCGAAGATGGAATTGTGCGATTGTGGCAAGTTGTTGAGGATGAGAGGCATAATGAAATTGACATTCCAGAAGTTGATACATCCTGTATTTATTTTACGGTGAATGATCTCTCGGAATTGACACCCTTGTTTATGGATAAGGATAAAATTAGAAATGTGAAGACCCTGAAAAAGACATCAGATTCAGCTTGCATCATTTTTCCTCCTAAGGTCTTCCGGTTGATGGAGAAACCACTTCATGAGTTTCATGGTCATGGAGGTGAAATTTTGGATCTCTCTTGGTCAAAGAATAATTATTTGCTGTCATCGTCGGTTGATAAAACTGTTCGTCTATGGCAAGTGGGACATGACTGCTGCTTGAAAGTTTTCTCACACAGTAACTATGTGACATGCATACAATTCAATCCTGTGGATGATGATTATTTCATTAGCGGATCAATAGATGGAAAAGTGCGCATATGGGCAATTCCTGATTGTCATGTTGTTGATTGGACTGATGTCAAGGAAATTGTCACCGCGGTGTGCTATCGGCCTGATGGACAGGTAGGGATTATTGGCTCCATGACAGGCAATTGTCGGTTTTACAATGTATCAGATAATCAATTACAGATGCAATCACAACTATGCTTACTTGGTAAAAAGAAATCTTCTGGAAGAGGAATAACCGGCTTTCAGTTTCTTCCACAAGATTTTAACAAAGTTATGGTTACCTGTGCTGATTCACAAGTCAGAATCATTGAAGGGCTTAATGTCGTTGAAAAATTCAAAGGCCTTAATGCAGCGAGCTTAATGTCTGCATCTTTTACTTCGGATGGAAAACACATTTTATCAGCCTGTGAAGACTCAAATGTATATCTGTGGAATGTTAGTGACGACGGGTCTCGCTCCACAAAAGCTAAGAAGATTAAGTCCTGCGAGCGGTTCTTTTCAAACGCATCTGTTGCAGTACCTTGGGGTGGTTTGAAATCTGATAACATCGAAAATTCTAAAAAATTGGATGTCCTAAATAAGAGGTCACCTCAAGCTGTATGCCTTGATCCACCGTCTTCTTTTTCTCTAAGCCAAGATTTTTATTTGGATTCTATTCCGAAAGGTTCCGCAACTTATCCCGAGGAGAAACTTCCTACTTCAAGCCCTAAGAGTAAAAAATCTTCACTGCACAAATCTGCATACAAGTTCTTGAAATCTTCATGCAAGAGTACTTCCAATTGTCATGCATGGGGTCTAGTAATCGTGACTGCTGGTTGGGATGGGCGAATAAAATCATTCCACAATTACGGATTACCTGTACTCCTTTGA
Protein sequence

>Msa0149270

MARFSEEEVQFFDAQDDIVSISDANGVADNPEVDSGPPLVEGLLRDFGYELWTRSPGSVRERRSKFIKWMELSLDQKNLENSVDGSSYEREDEINRMKDGGSSVSKSHGFMEDFFSSRLSMSCLSSMNSSEFGALVENSACEDRNDGGEVGLDRSVVSDESVNAAEVSSTSYQHEFGEEFEGSGMFESWTKRVKKSWLRKLRSMTCMMDVQQGESDNRKHEDGVSFSGCRIQRVKVRQCKKQRKELSALYMGQDIQAHEGPIFTMKFSPDGQYLASAGEDGIVRLWQVVEDERHNEIDIPEVDTSCIYFTVNDLSELTPLFMDKDKIRNVKTLKKTSDSACIIFPPKVFRLMEKPLHEFHGHGGEILDLSWSKNNYLLSSSVDKTVRLWQVGHDCCLKVFSHSNYVTCIQFNPVDDDYFISGSIDGKVRIWAIPDCHVVDWTDVKEIVTAVCYRPDGQVGIIGSMTGNCRFYNVSDNQLQMQSQLCLLGKKKSSGRGITGFQFLPQDFNKVMVTCADSQVRIIEGLNVVEKFKGLNAASLMSASFTSDGKHILSACEDSNVYLWNVSDDGSRSTKAKKIKSCERFFSNASVAVPWGGLKSDNIENSKKLDVLNKRSPQAVCLDPPSSFSLSQDFYLDSIPKGSATYPEEKLPTSSPKSKKSSLHKSAYKFLKSSCKSTSNCHAWGLVIVTAGWDGRIKSFHNYGLPVLL*