AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0425170


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0425170 MtrunA17_Chr3g0127201 97.586 290 4 2 17 303 1 290 0.0 576
Msa0425170 MtrunA17_Chr8g0346551 49.147 293 119 13 17 303 1 269 2.50e-73 226
Msa0425170 MtrunA17_Chr1g0188851 43.934 305 115 16 1 294 1 260 7.73e-56 182
Msa0425170 MtrunA17_Chr3g0117601 34.328 335 154 15 5 300 17 324 2.09e-38 138
Msa0425170 MtrunA17_Chr2g0326001 86.364 66 9 0 32 97 29 94 4.96e-37 133
Msa0425170 MtrunA17_Chr4g0010151 50.000 140 56 3 28 163 63 192 8.30e-34 127
Msa0425170 MtrunA17_Chr4g0030051 56.897 116 49 1 32 147 30 144 3.21e-33 123
Msa0425170 MtrunA17_Chr3g0126201 61.798 89 30 1 13 97 17 105 4.87e-32 121
Msa0425170 MtrunA17_Chr4g0031411 50.769 130 54 3 28 149 56 183 1.21e-31 120
Msa0425170 MtrunA17_Chr2g0328021 68.354 79 22 1 32 107 51 129 4.35e-31 117
Msa0425170 MtrunA17_Chr8g0367161 67.568 74 24 0 32 105 21 94 5.46e-31 119
Msa0425170 MtrunA17_Chr4g0047001 48.780 123 47 1 45 151 57 179 6.39e-31 119
Msa0425170 MtrunA17_Chr7g0223311 53.774 106 44 1 11 111 40 145 5.78e-30 116
Msa0425170 MtrunA17_Chr1g0177251 87.037 54 7 0 44 97 13 66 2.64e-29 113
Msa0425170 MtrunA17_Chr8g0374251 76.271 59 14 0 38 96 63 121 3.19e-29 114
Msa0425170 MtrunA17_Chr7g0237921 64.865 74 22 1 28 97 57 130 7.55e-29 113
Msa0425170 MtrunA17_Chr8g0374111 58.974 78 31 1 33 109 18 95 3.51e-28 108
Msa0425170 MtrunA17_Chr2g0282441 70.769 65 14 1 30 94 17 76 4.29e-28 110
Msa0425170 MtrunA17_Chr3g0092111 53.763 93 40 1 32 124 125 214 7.24e-28 112
Msa0425170 MtrunA17_Chr8g0341671 71.212 66 17 2 37 101 15 79 1.63e-27 106
Msa0425170 MtrunA17_Chr5g0411951 77.778 54 12 0 40 93 40 93 4.23e-27 108
Msa0425170 MtrunA17_Chr4g0047761 65.789 76 21 2 26 97 51 125 6.06e-27 107
Msa0425170 MtrunA17_Chr2g0282511 58.427 89 27 1 3 91 15 93 6.47e-27 107
Msa0425170 MtrunA17_Chr2g0308011 86.000 50 7 0 42 91 36 85 6.63e-27 104
Msa0425170 MtrunA17_Chr2g0282051 70.149 67 17 2 33 97 34 99 1.10e-26 105
Msa0425170 MtrunA17_Chr4g0042481 58.904 73 30 0 29 101 108 180 2.45e-26 107
Msa0425170 MtrunA17_Chr6g0453321 52.688 93 37 1 8 100 108 193 3.86e-26 107
Msa0425170 MtrunA17_Chr4g0061761 77.358 53 12 0 41 93 38 90 4.35e-26 105
Msa0425170 MtrunA17_Chr7g0217581 68.852 61 19 0 40 100 229 289 4.82e-26 107
Msa0425170 MtrunA17_Chr8g0355261 59.701 67 27 0 32 98 107 173 1.52e-25 105
Msa0425170 MtrunA17_Chr7g0254161 56.098 82 32 1 23 100 77 158 1.69e-25 105
Msa0425170 MtrunA17_Chr5g0417571 59.155 71 29 0 30 100 125 195 2.20e-25 103
Msa0425170 MtrunA17_Chr6g0460721 55.405 74 33 0 27 100 73 146 1.25e-24 101
Msa0425170 MtrunA17_Chr2g0283811 64.912 57 20 0 40 96 44 100 4.98e-24 95.9
Msa0425170 MtrunA17_Chr6g0460731 47.872 94 47 1 27 118 80 173 5.53e-24 100
Msa0425170 MtrunA17_Chr5g0417601 58.209 67 28 0 30 96 127 193 1.00e-22 97.1
Msa0425170 MtrunA17_Chr5g0417551 46.875 96 51 0 10 105 94 189 8.08e-22 94.4
Msa0425170 MtrunA17_Chr5g0417561 63.492 63 23 0 43 105 119 181 1.14e-21 93.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0425170 AT3G61850.4 37.815 357 135 17 1 303 1 324 5.71e-54 179
Msa0425170 AT3G61850.5 39.333 300 120 14 29 303 50 312 1.04e-52 175
Msa0425170 AT3G61850.1 38.218 348 118 17 1 303 1 296 4.73e-51 170
Msa0425170 AT4G24060.1 37.861 346 167 10 1 303 1 341 9.65e-51 171
Msa0425170 AT3G61850.2 41.812 287 103 15 29 303 50 284 1.56e-49 166
Msa0425170 AT3G61850.3 41.812 287 103 15 29 303 50 284 1.56e-49 166
Msa0425170 AT1G64620.1 38.136 354 147 15 1 298 1 338 6.95e-45 156
Msa0425170 AT2G46590.1 39.296 341 126 17 17 303 44 357 7.62e-43 150
Msa0425170 AT2G46590.2 39.296 341 126 17 17 303 56 369 1.19e-42 150
Msa0425170 AT5G60200.1 57.391 115 40 2 9 114 12 126 1.78e-37 134
Msa0425170 AT3G55370.1 71.951 82 18 2 29 106 59 139 6.94e-34 126
Msa0425170 AT3G55370.3 71.951 82 18 2 29 106 104 184 9.31e-34 127
Msa0425170 AT3G55370.2 71.951 82 18 2 29 106 59 139 9.36e-34 127
Msa0425170 AT2G28510.1 51.538 130 42 3 41 150 46 174 1.33e-33 125
Msa0425170 AT5G60850.1 70.270 74 22 0 41 114 49 122 4.29e-32 121
Msa0425170 AT3G45610.1 56.863 102 41 2 1 102 1 99 5.26e-32 119
Msa0425170 AT4G00940.1 60.185 108 35 2 30 131 57 162 9.20e-32 120
Msa0425170 AT4G00940.3 60.185 108 35 2 30 131 57 162 9.20e-32 120
Msa0425170 AT4G00940.2 60.185 108 35 2 30 131 57 162 9.20e-32 120
Msa0425170 AT1G51700.1 71.831 71 18 2 37 106 28 97 2.44e-30 113
Msa0425170 AT5G65590.1 60.227 88 30 1 16 103 19 101 3.61e-30 116
Msa0425170 AT5G62940.1 77.049 61 14 0 33 93 63 123 9.53e-30 116
Msa0425170 AT2G37590.1 67.123 73 21 1 29 98 72 144 1.01e-29 115
Msa0425170 AT3G52440.1 82.759 58 10 0 45 102 27 84 1.72e-29 113
Msa0425170 AT3G52440.2 82.759 58 10 0 45 102 46 103 2.05e-29 113
Msa0425170 AT5G02460.1 66.216 74 21 1 28 97 76 149 3.07e-29 115
Msa0425170 AT1G21340.1 81.034 58 11 0 45 102 40 97 1.15e-28 111
Msa0425170 AT3G21270.1 84.906 53 8 0 43 95 29 81 2.08e-28 108
Msa0425170 AT1G28310.1 81.818 55 10 0 43 97 27 81 4.71e-28 110
Msa0425170 AT1G28310.2 81.818 55 10 0 43 97 51 105 6.59e-28 110
Msa0425170 AT1G07640.2 65.278 72 22 1 29 97 60 131 9.00e-28 110
Msa0425170 AT1G07640.1 65.278 72 22 1 29 97 4 75 9.39e-28 108
Msa0425170 AT1G07640.3 65.278 72 22 1 29 97 68 139 1.26e-27 110
Msa0425170 AT5G66940.1 67.606 71 21 2 38 107 28 97 2.00e-27 107
Msa0425170 AT4G38000.1 60.526 76 29 1 22 96 20 95 2.76e-27 107
Msa0425170 AT2G28810.2 67.188 64 20 1 31 94 66 128 5.97e-27 107
Msa0425170 AT2G28810.1 67.188 64 20 1 31 94 83 145 8.79e-27 107
Msa0425170 AT3G50410.1 72.308 65 15 2 37 98 22 86 1.16e-26 105
Msa0425170 AT4G21050.1 71.875 64 17 1 45 108 26 88 2.48e-26 103
Msa0425170 AT1G47655.1 73.214 56 15 0 37 92 23 78 6.72e-26 102
Msa0425170 AT1G69570.1 67.742 62 20 0 35 96 124 185 3.03e-25 104
Msa0425170 AT5G39660.3 66.667 63 21 0 38 100 133 195 3.78e-25 104
Msa0425170 AT5G39660.1 66.667 63 21 0 38 100 133 195 3.78e-25 104
Msa0425170 AT5G39660.2 66.667 63 21 0 38 100 133 195 3.78e-25 104
Msa0425170 AT4G21040.1 67.188 64 19 1 45 108 27 88 4.47e-25 100
Msa0425170 AT3G47500.1 68.333 60 19 0 41 100 108 167 5.49e-25 104
Msa0425170 AT2G34140.1 62.903 62 23 0 35 96 50 111 7.53e-25 98.6
Msa0425170 AT1G26790.1 70.175 57 17 0 40 96 108 164 9.53e-25 102
Msa0425170 AT1G29160.1 55.844 77 32 1 20 96 41 115 9.90e-25 98.6
Msa0425170 AT5G62430.1 62.903 62 23 0 41 102 52 113 2.15e-24 100
Msa0425170 AT4G21080.1 49.425 87 32 2 45 121 27 111 1.45e-23 97.4
Msa0425170 AT4G21030.1 49.333 75 32 1 45 119 23 91 1.05e-14 71.6

Find 77 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATAGGTTATTATTATTTA+TGG 0.111949 3_2:+75545440 Msa0425170:three_prime_UTR
TCTTGTCCTTGATGGATCTT+AGG 0.169048 3_2:-75544739 None:intergenic
TTTAAGCTTGGGGTTAATTT+TGG 0.185562 3_2:+75544979 Msa0425170:CDS
TGTTCAAACTCACCACTATT+TGG 0.210892 3_2:-75545141 None:intergenic
ATCAGAACCACTAACAAAAT+AGG 0.243615 3_2:+75545415 Msa0425170:three_prime_UTR
TAAAATAAAATAAAATTAAA+AGG 0.254787 3_2:-75545310 None:intergenic
GGGAGTGGAAGTTTGAAATT+TGG 0.300326 3_2:+75545382 Msa0425170:three_prime_UTR
AAGGTGATTCTACTGGTTAT+TGG 0.303787 3_2:+75545181 Msa0425170:CDS
GAAGGGTTTGAGAATGGTTA+TGG 0.323309 3_2:+75545006 Msa0425170:CDS
GGTTAAGATCTTGTCCTTGA+TGG 0.347085 3_2:-75544747 None:intergenic
GCAAAACCTGTAGAAGGTAT+TGG 0.365118 3_2:+75544530 Msa0425170:CDS
TATTGGATTGGTTAAACAAA+TGG 0.368626 3_2:+75544351 Msa0425170:CDS
ATTAATAATCAAGAGGGTTC+TGG 0.381524 3_2:+75545042 Msa0425170:CDS
CTTGTCCTTGATGGATCTTA+GGG 0.390118 3_2:-75544738 None:intergenic
GAGGGTTCTGGTGGTGGTGG+TGG 0.395369 3_2:+75545054 Msa0425170:CDS
TGGAGGATCATGGTAGATAA+TGG 0.402212 3_2:+75545218 Msa0425170:exon
AATGGTTATGGTGGTTTACA+AGG 0.423897 3_2:+75545018 Msa0425170:CDS
CAAGAGGGTTCTGGTGGTGG+TGG 0.424985 3_2:+75545051 Msa0425170:CDS
GGTTATTGGAATGGAATGTT+AGG 0.425971 3_2:+75545195 Msa0425170:CDS
TGAAAACTGCTTCTTCATCA+AGG 0.432756 3_2:+75544878 Msa0425170:CDS
TTCAACTGATCCTCTACAAC+AGG 0.433420 3_2:-75545096 None:intergenic
AAGCTCAATGAATTTAGATA+TGG 0.438747 3_2:-75544809 None:intergenic
TCAGAACCACTAACAAAATA+GGG 0.443039 3_2:+75545416 Msa0425170:three_prime_UTR
TTCAGTCCAATACCTTCTAC+AGG 0.461329 3_2:-75544536 None:intergenic
TTGTCTTGATCAGTTGTGTA+AGG 0.463233 3_2:-75544832 None:intergenic
GGTTTAGAAGGGTTTGAGAA+TGG 0.472180 3_2:+75545000 Msa0425170:CDS
CTCTCTAACATAGAAGGTGT+TGG 0.476502 3_2:-75544397 None:intergenic
AATTTAGGGGAATATTGGAT+TGG 0.478716 3_2:+75544339 Msa0425170:intron
GATTCTACTGGTTATTGGAA+TGG 0.482077 3_2:+75545186 Msa0425170:CDS
GAATGTTAGGTGGAGGATCA+TGG 0.482360 3_2:+75545208 Msa0425170:CDS
CTAGACTCAGACAAAGTCAT+AGG 0.485051 3_2:-75544919 None:intergenic
GAAAACTGCTTCTTCATCAA+GGG 0.488666 3_2:+75544879 Msa0425170:CDS
CAGCAACAAATTCCAAATAG+TGG 0.488831 3_2:+75545129 Msa0425170:CDS
TAATTATCCTCAGTTGTTTG+TGG 0.490761 3_2:-75544781 None:intergenic
AATCAAGAGGGTTCTGGTGG+TGG 0.495161 3_2:+75545048 Msa0425170:CDS
TTGTTTGTGGTGGATAAGCT+AGG 0.500159 3_2:-75544768 None:intergenic
CAAGGGATTAATAATCAAGA+GGG 0.503180 3_2:+75545036 Msa0425170:CDS
TTTCTTGAACCACCACCTAC+AGG 0.506879 3_2:-75544580 None:intergenic
AGGTTATTATTATTTATGGA+TGG 0.508477 3_2:+75545444 Msa0425170:three_prime_UTR
TGGAATGGAATGTTAGGTGG+AGG 0.515123 3_2:+75545201 Msa0425170:CDS
TATTGGAATGGAATGTTAGG+TGG 0.516493 3_2:+75545198 Msa0425170:CDS
AGAAATGTTCCTGTAGGTGG+TGG 0.516507 3_2:+75544571 Msa0425170:CDS
TCTTTAAGAAATGTTCCTGT+AGG 0.524165 3_2:+75544565 Msa0425170:CDS
GTGAAGAAAGTGATAAACAA+GGG 0.528045 3_2:+75545261 Msa0425170:three_prime_UTR
TTATCCTCAGTTGTTTGTGG+TGG 0.529976 3_2:-75544778 None:intergenic
GGGTTTGAGAATGGTTATGG+TGG 0.530540 3_2:+75545009 Msa0425170:CDS
GATGTTGTTTCCTGTTGTAG+AGG 0.531104 3_2:+75545086 Msa0425170:CDS
TTAAGAAATGTTCCTGTAGG+TGG 0.533560 3_2:+75544568 Msa0425170:CDS
AGACAAAACTACAAGTGCTA+TGG 0.533697 3_2:+75544849 Msa0425170:CDS
AGAACTCAAGGTGATTCTAC+TGG 0.537114 3_2:+75545174 Msa0425170:CDS
ACTAACAAAATAGGGTACAT+AGG 0.541218 3_2:+75545424 Msa0425170:three_prime_UTR
CATCAGCAAAATAGAACTCA+AGG 0.544205 3_2:+75545162 Msa0425170:CDS
ATCTATGGACACAGCTCAGT+GGG 0.545119 3_2:+75543903 Msa0425170:exon
GGATTGGTTAAACAAATGGA+TGG 0.552908 3_2:+75544355 Msa0425170:CDS
ATCAAGCTTTAAACTGTCCA+AGG 0.561852 3_2:+75544440 Msa0425170:CDS
AAAACTGCTTCTTCATCAAG+GGG 0.565168 3_2:+75544880 Msa0425170:CDS
AGTGCAATGTATAATTCAAG+TGG 0.566445 3_2:+75544940 Msa0425170:CDS
CAAAACCCTAAGATCCATCA+AGG 0.571674 3_2:+75544733 Msa0425170:CDS
ACAAGGGATTAATAATCAAG+AGG 0.578555 3_2:+75545035 Msa0425170:CDS
AAAAGTACCTTGGTTGTGAG+AGG 0.583488 3_2:-75544507 None:intergenic
GGTTGTGATTGTGAGATTGA+AGG 0.587222 3_2:-75544631 None:intergenic
ATGGTTATGGTGGTTTACAA+GGG 0.592394 3_2:+75545019 Msa0425170:CDS
TGTAGAAGGTATTGGACTGA+AGG 0.596876 3_2:+75544538 Msa0425170:CDS
GAAAGTGATAAACAAGGGGT+TGG 0.599924 3_2:+75545266 Msa0425170:three_prime_UTR
GGACACAGCTCAGTGGGCAC+AGG 0.600044 3_2:+75543909 Msa0425170:CDS
GAATTGGAATATAGTAGTAG+TGG 0.605552 3_2:-75543756 None:intergenic
AGAAGGTATTGGACTGAAGG+TGG 0.620239 3_2:+75544541 Msa0425170:CDS
AGTGAAGAAAGTGATAAACA+AGG 0.620571 3_2:+75545260 Msa0425170:three_prime_UTR
GATTGAAGGTGATGATGATG+AGG 0.631503 3_2:-75544617 None:intergenic
AATAATCAAGAGGGTTCTGG+TGG 0.645196 3_2:+75545045 Msa0425170:CDS
TGAAGAAAGTGATAAACAAG+GGG 0.647930 3_2:+75545262 Msa0425170:three_prime_UTR
ATAACTACAGAAGATTAATG+TGG 0.660579 3_2:+75545539 Msa0425170:three_prime_UTR
ACTATAGCCTCTCACAACCA+AGG 0.671979 3_2:+75544500 Msa0425170:CDS
GTGTTAGTTGAATTGCACCT+TGG 0.675503 3_2:-75544457 None:intergenic
AATCTATGGACACAGCTCAG+TGG 0.676107 3_2:+75543902 Msa0425170:exon
TTATCCACCACAAACAACTG+AGG 0.701982 3_2:+75544774 Msa0425170:CDS
CTATGTTAGAGAGAAAAGCA+AGG 0.712069 3_2:+75544407 Msa0425170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATAAAATAAAATTAAA+AGG - chr3_2:75545313-75545332 None:intergenic 0.0%
!! TAAAATAAAATAAAATTAAA+AGG - chr3_2:75545313-75545332 None:intergenic 0.0%
!! AAGTATATAAGAAATAATAA+AGG - chr3_2:75544297-75544316 None:intergenic 10.0%
!!! TTTATTTTTGAAAAATTTAG+GGG + chr3_2:75544326-75544345 Msa0425170:intron 10.0%
!!! TTCTTTAATCTATTTTAATT+TGG + chr3_2:75545479-75545498 Msa0425170:three_prime_UTR 10.0%
!! AAGTATATAAGAAATAATAA+AGG - chr3_2:75544297-75544316 None:intergenic 10.0%
!!! TTTATTTTTGAAAAATTTAG+GGG + chr3_2:75544326-75544345 Msa0425170:intron 10.0%
!!! TTCTTTAATCTATTTTAATT+TGG + chr3_2:75545479-75545498 Msa0425170:three_prime_UTR 10.0%
!! TGATACATAAAACTTTATTA+TGG - chr3_2:75544019-75544038 None:intergenic 15.0%
!! GAAGAAAAATATAAATGAAA+AGG - chr3_2:75544159-75544178 None:intergenic 15.0%
!!! ATATTTTTTGTTATTGATGA+TGG - chr3_2:75544658-75544677 None:intergenic 15.0%
!! ACATAGGTTATTATTATTTA+TGG + chr3_2:75545440-75545459 Msa0425170:three_prime_UTR 15.0%
!! TGATACATAAAACTTTATTA+TGG - chr3_2:75544019-75544038 None:intergenic 15.0%
!! GAAGAAAAATATAAATGAAA+AGG - chr3_2:75544159-75544178 None:intergenic 15.0%
!!! ATATTTTTTGTTATTGATGA+TGG - chr3_2:75544658-75544677 None:intergenic 15.0%
!! ACATAGGTTATTATTATTTA+TGG + chr3_2:75545440-75545459 Msa0425170:three_prime_UTR 15.0%
!! TAAGAAGAAAAATGGAAAAA+AGG - chr3_2:75543882-75543901 None:intergenic 20.0%
!! CATAGATTTAAGAAGAAAAA+TGG - chr3_2:75543890-75543909 None:intergenic 20.0%
!!! CATTTTTCTTCTTAAATCTA+TGG + chr3_2:75543888-75543907 Msa0425170:exon 20.0%
!!! TTTTCTTCATGATTATAAGA+AGG - chr3_2:75543964-75543983 None:intergenic 20.0%
!!! AAAACTGAAATTTTTAGTTG+AGG - chr3_2:75544110-75544129 None:intergenic 20.0%
!!! AAATTCATCAACTTTTTCTT+GGG - chr3_2:75544212-75544231 None:intergenic 20.0%
!!! TTTTTCTCATCTTTATCTTT+TGG + chr3_2:75545351-75545370 Msa0425170:three_prime_UTR 20.0%
!! AGGTTATTATTATTTATGGA+TGG + chr3_2:75545444-75545463 Msa0425170:three_prime_UTR 20.0%
!! TAAGAAGAAAAATGGAAAAA+AGG - chr3_2:75543882-75543901 None:intergenic 20.0%
!! CATAGATTTAAGAAGAAAAA+TGG - chr3_2:75543890-75543909 None:intergenic 20.0%
!!! CATTTTTCTTCTTAAATCTA+TGG + chr3_2:75543888-75543907 Msa0425170:exon 20.0%
!!! TTTTCTTCATGATTATAAGA+AGG - chr3_2:75543964-75543983 None:intergenic 20.0%
!!! AAAACTGAAATTTTTAGTTG+AGG - chr3_2:75544110-75544129 None:intergenic 20.0%
!!! AAATTCATCAACTTTTTCTT+GGG - chr3_2:75544212-75544231 None:intergenic 20.0%
!!! TTTTTCTCATCTTTATCTTT+TGG + chr3_2:75545351-75545370 Msa0425170:three_prime_UTR 20.0%
!! AGGTTATTATTATTTATGGA+TGG + chr3_2:75545444-75545463 Msa0425170:three_prime_UTR 20.0%
! TCTAGAAACTAGAAAAAAGT+GGG + chr3_2:75543819-75543838 Msa0425170:five_prime_UTR 25.0%
! GAAAAATGGAAAAAAGGAAA+AGG - chr3_2:75543876-75543895 None:intergenic 25.0%
!!! GTTGATTATTGTTAGTTCTA+AGG + chr3_2:75544047-75544066 Msa0425170:intron 25.0%
!!! CAAATTCATCAACTTTTTCT+TGG - chr3_2:75544213-75544232 None:intergenic 25.0%
! AATAAAGGAAACAAACAAGA+AGG - chr3_2:75544282-75544301 None:intergenic 25.0%
! TGAAAAATTTAGGGGAATAT+TGG + chr3_2:75544334-75544353 Msa0425170:intron 25.0%
!!! TATTGGATTGGTTAAACAAA+TGG + chr3_2:75544351-75544370 Msa0425170:CDS 25.0%
!!! TTTAAAGCTTGATCTTTTTG+TGG - chr3_2:75544433-75544452 None:intergenic 25.0%
!!! TTTTTTGTTATTGATGATGG+AGG - chr3_2:75544655-75544674 None:intergenic 25.0%
! AAGCTCAATGAATTTAGATA+TGG - chr3_2:75544812-75544831 None:intergenic 25.0%
!!! ATCTTTATCTTTTGGTAATG+TGG + chr3_2:75545359-75545378 Msa0425170:three_prime_UTR 25.0%
!!! TCTTTATCTTTTGGTAATGT+GGG + chr3_2:75545360-75545379 Msa0425170:three_prime_UTR 25.0%
! ATAACTACAGAAGATTAATG+TGG + chr3_2:75545539-75545558 Msa0425170:three_prime_UTR 25.0%
! TCTAGAAACTAGAAAAAAGT+GGG + chr3_2:75543819-75543838 Msa0425170:five_prime_UTR 25.0%
! GAAAAATGGAAAAAAGGAAA+AGG - chr3_2:75543876-75543895 None:intergenic 25.0%
!!! GTTGATTATTGTTAGTTCTA+AGG + chr3_2:75544047-75544066 Msa0425170:intron 25.0%
!!! CAAATTCATCAACTTTTTCT+TGG - chr3_2:75544213-75544232 None:intergenic 25.0%
! AATAAAGGAAACAAACAAGA+AGG - chr3_2:75544282-75544301 None:intergenic 25.0%
! TGAAAAATTTAGGGGAATAT+TGG + chr3_2:75544334-75544353 Msa0425170:intron 25.0%
!!! TATTGGATTGGTTAAACAAA+TGG + chr3_2:75544351-75544370 Msa0425170:CDS 25.0%
!!! TTTAAAGCTTGATCTTTTTG+TGG - chr3_2:75544433-75544452 None:intergenic 25.0%
!!! TTTTTTGTTATTGATGATGG+AGG - chr3_2:75544655-75544674 None:intergenic 25.0%
! AAGCTCAATGAATTTAGATA+TGG - chr3_2:75544812-75544831 None:intergenic 25.0%
!!! ATCTTTATCTTTTGGTAATG+TGG + chr3_2:75545359-75545378 Msa0425170:three_prime_UTR 25.0%
!!! TCTTTATCTTTTGGTAATGT+GGG + chr3_2:75545360-75545379 Msa0425170:three_prime_UTR 25.0%
! ATAACTACAGAAGATTAATG+TGG + chr3_2:75545539-75545558 Msa0425170:three_prime_UTR 25.0%
GAATTGGAATATAGTAGTAG+TGG - chr3_2:75543759-75543778 None:intergenic 30.0%
!!! CACTTTTTTCTAGTTTCTAG+AGG - chr3_2:75543820-75543839 None:intergenic 30.0%
! CTCTAGAAACTAGAAAAAAG+TGG + chr3_2:75543818-75543837 Msa0425170:five_prime_UTR 30.0%
GAAGGAAAGAAAACAGAAAA+AGG - chr3_2:75543946-75543965 None:intergenic 30.0%
!!! GAAATTTTTAGTTGAGGATC+AGG - chr3_2:75544104-75544123 None:intergenic 30.0%
! CTTTTTCTTGGGAAAAAGAA+AGG - chr3_2:75544201-75544220 None:intergenic 30.0%
AATTTAGGGGAATATTGGAT+TGG + chr3_2:75544339-75544358 Msa0425170:intron 30.0%
! TCTTTAAGAAATGTTCCTGT+AGG + chr3_2:75544565-75544584 Msa0425170:CDS 30.0%
TAATTATCCTCAGTTGTTTG+TGG - chr3_2:75544784-75544803 None:intergenic 30.0%
AGTGCAATGTATAATTCAAG+TGG + chr3_2:75544940-75544959 Msa0425170:CDS 30.0%
! CTTTGCAAGATTTTAAGCTT+GGG + chr3_2:75544968-75544987 Msa0425170:CDS 30.0%
! TTTGCAAGATTTTAAGCTTG+GGG + chr3_2:75544969-75544988 Msa0425170:CDS 30.0%
! TTTAAGCTTGGGGTTAATTT+TGG + chr3_2:75544979-75544998 Msa0425170:CDS 30.0%
!!! GGGTTAATTTTGGTTTAGAA+GGG + chr3_2:75544989-75545008 Msa0425170:CDS 30.0%
ACAAGGGATTAATAATCAAG+AGG + chr3_2:75545035-75545054 Msa0425170:CDS 30.0%
CAAGGGATTAATAATCAAGA+GGG + chr3_2:75545036-75545055 Msa0425170:CDS 30.0%
ATTAATAATCAAGAGGGTTC+TGG + chr3_2:75545042-75545061 Msa0425170:CDS 30.0%
AGTGAAGAAAGTGATAAACA+AGG + chr3_2:75545260-75545279 Msa0425170:three_prime_UTR 30.0%
GTGAAGAAAGTGATAAACAA+GGG + chr3_2:75545261-75545280 Msa0425170:three_prime_UTR 30.0%
TGAAGAAAGTGATAAACAAG+GGG + chr3_2:75545262-75545281 Msa0425170:three_prime_UTR 30.0%
!!! CTTTATCTTTTGGTAATGTG+GGG + chr3_2:75545361-75545380 Msa0425170:three_prime_UTR 30.0%
!!! TTTATCTTTTGGTAATGTGG+GGG + chr3_2:75545362-75545381 Msa0425170:three_prime_UTR 30.0%
ATCAGAACCACTAACAAAAT+AGG + chr3_2:75545415-75545434 Msa0425170:three_prime_UTR 30.0%
TCAGAACCACTAACAAAATA+GGG + chr3_2:75545416-75545435 Msa0425170:three_prime_UTR 30.0%
! TATGTACCCTATTTTGTTAG+TGG - chr3_2:75545425-75545444 None:intergenic 30.0%
ACTAACAAAATAGGGTACAT+AGG + chr3_2:75545424-75545443 Msa0425170:three_prime_UTR 30.0%
GAATTGGAATATAGTAGTAG+TGG - chr3_2:75543759-75543778 None:intergenic 30.0%
!!! CACTTTTTTCTAGTTTCTAG+AGG - chr3_2:75543820-75543839 None:intergenic 30.0%
! CTCTAGAAACTAGAAAAAAG+TGG + chr3_2:75543818-75543837 Msa0425170:five_prime_UTR 30.0%
GAAGGAAAGAAAACAGAAAA+AGG - chr3_2:75543946-75543965 None:intergenic 30.0%
!!! GAAATTTTTAGTTGAGGATC+AGG - chr3_2:75544104-75544123 None:intergenic 30.0%
! CTTTTTCTTGGGAAAAAGAA+AGG - chr3_2:75544201-75544220 None:intergenic 30.0%
AATTTAGGGGAATATTGGAT+TGG + chr3_2:75544339-75544358 Msa0425170:intron 30.0%
! TCTTTAAGAAATGTTCCTGT+AGG + chr3_2:75544565-75544584 Msa0425170:CDS 30.0%
TAATTATCCTCAGTTGTTTG+TGG - chr3_2:75544784-75544803 None:intergenic 30.0%
AGTGCAATGTATAATTCAAG+TGG + chr3_2:75544940-75544959 Msa0425170:CDS 30.0%
! CTTTGCAAGATTTTAAGCTT+GGG + chr3_2:75544968-75544987 Msa0425170:CDS 30.0%
! TTTGCAAGATTTTAAGCTTG+GGG + chr3_2:75544969-75544988 Msa0425170:CDS 30.0%
! TTTAAGCTTGGGGTTAATTT+TGG + chr3_2:75544979-75544998 Msa0425170:CDS 30.0%
!!! GGGTTAATTTTGGTTTAGAA+GGG + chr3_2:75544989-75545008 Msa0425170:CDS 30.0%
ACAAGGGATTAATAATCAAG+AGG + chr3_2:75545035-75545054 Msa0425170:CDS 30.0%
CAAGGGATTAATAATCAAGA+GGG + chr3_2:75545036-75545055 Msa0425170:CDS 30.0%
ATTAATAATCAAGAGGGTTC+TGG + chr3_2:75545042-75545061 Msa0425170:CDS 30.0%
AGTGAAGAAAGTGATAAACA+AGG + chr3_2:75545260-75545279 Msa0425170:three_prime_UTR 30.0%
GTGAAGAAAGTGATAAACAA+GGG + chr3_2:75545261-75545280 Msa0425170:three_prime_UTR 30.0%
TGAAGAAAGTGATAAACAAG+GGG + chr3_2:75545262-75545281 Msa0425170:three_prime_UTR 30.0%
!!! CTTTATCTTTTGGTAATGTG+GGG + chr3_2:75545361-75545380 Msa0425170:three_prime_UTR 30.0%
!!! TTTATCTTTTGGTAATGTGG+GGG + chr3_2:75545362-75545381 Msa0425170:three_prime_UTR 30.0%
ATCAGAACCACTAACAAAAT+AGG + chr3_2:75545415-75545434 Msa0425170:three_prime_UTR 30.0%
TCAGAACCACTAACAAAATA+GGG + chr3_2:75545416-75545435 Msa0425170:three_prime_UTR 30.0%
! TATGTACCCTATTTTGTTAG+TGG - chr3_2:75545425-75545444 None:intergenic 30.0%
ACTAACAAAATAGGGTACAT+AGG + chr3_2:75545424-75545443 Msa0425170:three_prime_UTR 30.0%
!!! AAGCTTTTGAGACTTGGAAT+TGG - chr3_2:75543775-75543794 None:intergenic 35.0%
!!! TGCATAAAGCTTTTGAGACT+TGG - chr3_2:75543781-75543800 None:intergenic 35.0%
AGGATCAGGAAAAGTAGTAA+AGG - chr3_2:75544090-75544109 None:intergenic 35.0%
!! GGATTGGTTAAACAAATGGA+TGG + chr3_2:75544355-75544374 Msa0425170:CDS 35.0%
! GCTTTTCTCTCTAACATAGA+AGG - chr3_2:75544406-75544425 None:intergenic 35.0%
CTATGTTAGAGAGAAAAGCA+AGG + chr3_2:75544407-75544426 Msa0425170:CDS 35.0%
!! ATCAAGCTTTAAACTGTCCA+AGG + chr3_2:75544440-75544459 Msa0425170:CDS 35.0%
! ACTTTTGCAAAACCTGTAGA+AGG + chr3_2:75544524-75544543 Msa0425170:CDS 35.0%
TTAAGAAATGTTCCTGTAGG+TGG + chr3_2:75544568-75544587 Msa0425170:CDS 35.0%
TTGTCTTGATCAGTTGTGTA+AGG - chr3_2:75544835-75544854 None:intergenic 35.0%
AGACAAAACTACAAGTGCTA+TGG + chr3_2:75544849-75544868 Msa0425170:CDS 35.0%
TGAAAACTGCTTCTTCATCA+AGG + chr3_2:75544878-75544897 Msa0425170:CDS 35.0%
GAAAACTGCTTCTTCATCAA+GGG + chr3_2:75544879-75544898 Msa0425170:CDS 35.0%
AAAACTGCTTCTTCATCAAG+GGG + chr3_2:75544880-75544899 Msa0425170:CDS 35.0%
! GCTTTGCAAGATTTTAAGCT+TGG + chr3_2:75544967-75544986 Msa0425170:CDS 35.0%
!!! GGGGTTAATTTTGGTTTAGA+AGG + chr3_2:75544988-75545007 Msa0425170:CDS 35.0%
AATGGTTATGGTGGTTTACA+AGG + chr3_2:75545018-75545037 Msa0425170:CDS 35.0%
ATGGTTATGGTGGTTTACAA+GGG + chr3_2:75545019-75545038 Msa0425170:CDS 35.0%
CAGCAACAAATTCCAAATAG+TGG + chr3_2:75545129-75545148 Msa0425170:CDS 35.0%
TGTTCAAACTCACCACTATT+TGG - chr3_2:75545144-75545163 None:intergenic 35.0%
CATCAGCAAAATAGAACTCA+AGG + chr3_2:75545162-75545181 Msa0425170:CDS 35.0%
! AAGGTGATTCTACTGGTTAT+TGG + chr3_2:75545181-75545200 Msa0425170:CDS 35.0%
! GATTCTACTGGTTATTGGAA+TGG + chr3_2:75545186-75545205 Msa0425170:CDS 35.0%
GGTTATTGGAATGGAATGTT+AGG + chr3_2:75545195-75545214 Msa0425170:CDS 35.0%
TATTGGAATGGAATGTTAGG+TGG + chr3_2:75545198-75545217 Msa0425170:CDS 35.0%
!!! AAGCTTTTGAGACTTGGAAT+TGG - chr3_2:75543775-75543794 None:intergenic 35.0%
!!! TGCATAAAGCTTTTGAGACT+TGG - chr3_2:75543781-75543800 None:intergenic 35.0%
AGGATCAGGAAAAGTAGTAA+AGG - chr3_2:75544090-75544109 None:intergenic 35.0%
!! GGATTGGTTAAACAAATGGA+TGG + chr3_2:75544355-75544374 Msa0425170:CDS 35.0%
! GCTTTTCTCTCTAACATAGA+AGG - chr3_2:75544406-75544425 None:intergenic 35.0%
CTATGTTAGAGAGAAAAGCA+AGG + chr3_2:75544407-75544426 Msa0425170:CDS 35.0%
!! ATCAAGCTTTAAACTGTCCA+AGG + chr3_2:75544440-75544459 Msa0425170:CDS 35.0%
! ACTTTTGCAAAACCTGTAGA+AGG + chr3_2:75544524-75544543 Msa0425170:CDS 35.0%
TTAAGAAATGTTCCTGTAGG+TGG + chr3_2:75544568-75544587 Msa0425170:CDS 35.0%
TTGTCTTGATCAGTTGTGTA+AGG - chr3_2:75544835-75544854 None:intergenic 35.0%
AGACAAAACTACAAGTGCTA+TGG + chr3_2:75544849-75544868 Msa0425170:CDS 35.0%
TGAAAACTGCTTCTTCATCA+AGG + chr3_2:75544878-75544897 Msa0425170:CDS 35.0%
GAAAACTGCTTCTTCATCAA+GGG + chr3_2:75544879-75544898 Msa0425170:CDS 35.0%
AAAACTGCTTCTTCATCAAG+GGG + chr3_2:75544880-75544899 Msa0425170:CDS 35.0%
! GCTTTGCAAGATTTTAAGCT+TGG + chr3_2:75544967-75544986 Msa0425170:CDS 35.0%
!!! GGGGTTAATTTTGGTTTAGA+AGG + chr3_2:75544988-75545007 Msa0425170:CDS 35.0%
AATGGTTATGGTGGTTTACA+AGG + chr3_2:75545018-75545037 Msa0425170:CDS 35.0%
ATGGTTATGGTGGTTTACAA+GGG + chr3_2:75545019-75545038 Msa0425170:CDS 35.0%
CAGCAACAAATTCCAAATAG+TGG + chr3_2:75545129-75545148 Msa0425170:CDS 35.0%
TGTTCAAACTCACCACTATT+TGG - chr3_2:75545144-75545163 None:intergenic 35.0%
CATCAGCAAAATAGAACTCA+AGG + chr3_2:75545162-75545181 Msa0425170:CDS 35.0%
! AAGGTGATTCTACTGGTTAT+TGG + chr3_2:75545181-75545200 Msa0425170:CDS 35.0%
! GATTCTACTGGTTATTGGAA+TGG + chr3_2:75545186-75545205 Msa0425170:CDS 35.0%
GGTTATTGGAATGGAATGTT+AGG + chr3_2:75545195-75545214 Msa0425170:CDS 35.0%
TATTGGAATGGAATGTTAGG+TGG + chr3_2:75545198-75545217 Msa0425170:CDS 35.0%
! CTCTCTAACATAGAAGGTGT+TGG - chr3_2:75544400-75544419 None:intergenic 40.0%
GTGTTAGTTGAATTGCACCT+TGG - chr3_2:75544460-75544479 None:intergenic 40.0%
!! AAAAGTACCTTGGTTGTGAG+AGG - chr3_2:75544510-75544529 None:intergenic 40.0%
!!! CAGGTTTTGCAAAAGTACCT+TGG - chr3_2:75544520-75544539 None:intergenic 40.0%
! GCAAAACCTGTAGAAGGTAT+TGG + chr3_2:75544530-75544549 Msa0425170:CDS 40.0%
TTCAGTCCAATACCTTCTAC+AGG - chr3_2:75544539-75544558 None:intergenic 40.0%
!! TGTAGAAGGTATTGGACTGA+AGG + chr3_2:75544538-75544557 Msa0425170:CDS 40.0%
! GATTGAAGGTGATGATGATG+AGG - chr3_2:75544620-75544639 None:intergenic 40.0%
GGTTGTGATTGTGAGATTGA+AGG - chr3_2:75544634-75544653 None:intergenic 40.0%
! TTTTGTGCTGTAGCAAGATC+AGG - chr3_2:75544691-75544710 None:intergenic 40.0%
!!! GGTTTTGAGAAGCAGATTGA+GGG - chr3_2:75544720-75544739 None:intergenic 40.0%
CAAAACCCTAAGATCCATCA+AGG + chr3_2:75544733-75544752 Msa0425170:CDS 40.0%
! CTTGTCCTTGATGGATCTTA+GGG - chr3_2:75544741-75544760 None:intergenic 40.0%
! TCTTGTCCTTGATGGATCTT+AGG - chr3_2:75544742-75544761 None:intergenic 40.0%
GGTTAAGATCTTGTCCTTGA+TGG - chr3_2:75544750-75544769 None:intergenic 40.0%
!! TTGTTTGTGGTGGATAAGCT+AGG - chr3_2:75544771-75544790 None:intergenic 40.0%
TTATCCACCACAAACAACTG+AGG + chr3_2:75544774-75544793 Msa0425170:CDS 40.0%
TTATCCTCAGTTGTTTGTGG+TGG - chr3_2:75544781-75544800 None:intergenic 40.0%
CTAGACTCAGACAAAGTCAT+AGG - chr3_2:75544922-75544941 None:intergenic 40.0%
GGTTTAGAAGGGTTTGAGAA+TGG + chr3_2:75545000-75545019 Msa0425170:CDS 40.0%
GAAGGGTTTGAGAATGGTTA+TGG + chr3_2:75545006-75545025 Msa0425170:CDS 40.0%
! AATAATCAAGAGGGTTCTGG+TGG + chr3_2:75545045-75545064 Msa0425170:CDS 40.0%
!! GATGTTGTTTCCTGTTGTAG+AGG + chr3_2:75545086-75545105 Msa0425170:CDS 40.0%
TTCAACTGATCCTCTACAAC+AGG - chr3_2:75545099-75545118 None:intergenic 40.0%
AGAACTCAAGGTGATTCTAC+TGG + chr3_2:75545174-75545193 Msa0425170:CDS 40.0%
TGGAGGATCATGGTAGATAA+TGG + chr3_2:75545218-75545237 Msa0425170:exon 40.0%
GAAAGTGATAAACAAGGGGT+TGG + chr3_2:75545266-75545285 Msa0425170:three_prime_UTR 40.0%
! GGGAGTGGAAGTTTGAAATT+TGG + chr3_2:75545382-75545401 Msa0425170:three_prime_UTR 40.0%
! CTCTCTAACATAGAAGGTGT+TGG - chr3_2:75544400-75544419 None:intergenic 40.0%
GTGTTAGTTGAATTGCACCT+TGG - chr3_2:75544460-75544479 None:intergenic 40.0%
!! AAAAGTACCTTGGTTGTGAG+AGG - chr3_2:75544510-75544529 None:intergenic 40.0%
!!! CAGGTTTTGCAAAAGTACCT+TGG - chr3_2:75544520-75544539 None:intergenic 40.0%
! GCAAAACCTGTAGAAGGTAT+TGG + chr3_2:75544530-75544549 Msa0425170:CDS 40.0%
TTCAGTCCAATACCTTCTAC+AGG - chr3_2:75544539-75544558 None:intergenic 40.0%
!! TGTAGAAGGTATTGGACTGA+AGG + chr3_2:75544538-75544557 Msa0425170:CDS 40.0%
! GATTGAAGGTGATGATGATG+AGG - chr3_2:75544620-75544639 None:intergenic 40.0%
GGTTGTGATTGTGAGATTGA+AGG - chr3_2:75544634-75544653 None:intergenic 40.0%
! TTTTGTGCTGTAGCAAGATC+AGG - chr3_2:75544691-75544710 None:intergenic 40.0%
!!! GGTTTTGAGAAGCAGATTGA+GGG - chr3_2:75544720-75544739 None:intergenic 40.0%
CAAAACCCTAAGATCCATCA+AGG + chr3_2:75544733-75544752 Msa0425170:CDS 40.0%
! CTTGTCCTTGATGGATCTTA+GGG - chr3_2:75544741-75544760 None:intergenic 40.0%
! TCTTGTCCTTGATGGATCTT+AGG - chr3_2:75544742-75544761 None:intergenic 40.0%
GGTTAAGATCTTGTCCTTGA+TGG - chr3_2:75544750-75544769 None:intergenic 40.0%
!! TTGTTTGTGGTGGATAAGCT+AGG - chr3_2:75544771-75544790 None:intergenic 40.0%
TTATCCACCACAAACAACTG+AGG + chr3_2:75544774-75544793 Msa0425170:CDS 40.0%
TTATCCTCAGTTGTTTGTGG+TGG - chr3_2:75544781-75544800 None:intergenic 40.0%
CTAGACTCAGACAAAGTCAT+AGG - chr3_2:75544922-75544941 None:intergenic 40.0%
GGTTTAGAAGGGTTTGAGAA+TGG + chr3_2:75545000-75545019 Msa0425170:CDS 40.0%
GAAGGGTTTGAGAATGGTTA+TGG + chr3_2:75545006-75545025 Msa0425170:CDS 40.0%
! AATAATCAAGAGGGTTCTGG+TGG + chr3_2:75545045-75545064 Msa0425170:CDS 40.0%
!! GATGTTGTTTCCTGTTGTAG+AGG + chr3_2:75545086-75545105 Msa0425170:CDS 40.0%
TTCAACTGATCCTCTACAAC+AGG - chr3_2:75545099-75545118 None:intergenic 40.0%
AGAACTCAAGGTGATTCTAC+TGG + chr3_2:75545174-75545193 Msa0425170:CDS 40.0%
TGGAGGATCATGGTAGATAA+TGG + chr3_2:75545218-75545237 Msa0425170:exon 40.0%
GAAAGTGATAAACAAGGGGT+TGG + chr3_2:75545266-75545285 Msa0425170:three_prime_UTR 40.0%
! GGGAGTGGAAGTTTGAAATT+TGG + chr3_2:75545382-75545401 Msa0425170:three_prime_UTR 40.0%
AATCTATGGACACAGCTCAG+TGG + chr3_2:75543902-75543921 Msa0425170:exon 45.0%
ATCTATGGACACAGCTCAGT+GGG + chr3_2:75543903-75543922 Msa0425170:exon 45.0%
ACTATAGCCTCTCACAACCA+AGG + chr3_2:75544500-75544519 Msa0425170:CDS 45.0%
!! AGAAGGTATTGGACTGAAGG+TGG + chr3_2:75544541-75544560 Msa0425170:CDS 45.0%
AGAAATGTTCCTGTAGGTGG+TGG + chr3_2:75544571-75544590 Msa0425170:CDS 45.0%
TTTCTTGAACCACCACCTAC+AGG - chr3_2:75544583-75544602 None:intergenic 45.0%
!!! GGGTTTTGAGAAGCAGATTG+AGG - chr3_2:75544721-75544740 None:intergenic 45.0%
GGGTTTGAGAATGGTTATGG+TGG + chr3_2:75545009-75545028 Msa0425170:CDS 45.0%
TGGAATGGAATGTTAGGTGG+AGG + chr3_2:75545201-75545220 Msa0425170:CDS 45.0%
GAATGTTAGGTGGAGGATCA+TGG + chr3_2:75545208-75545227 Msa0425170:CDS 45.0%
AATCTATGGACACAGCTCAG+TGG + chr3_2:75543902-75543921 Msa0425170:exon 45.0%
ATCTATGGACACAGCTCAGT+GGG + chr3_2:75543903-75543922 Msa0425170:exon 45.0%
ACTATAGCCTCTCACAACCA+AGG + chr3_2:75544500-75544519 Msa0425170:CDS 45.0%
!! AGAAGGTATTGGACTGAAGG+TGG + chr3_2:75544541-75544560 Msa0425170:CDS 45.0%
AGAAATGTTCCTGTAGGTGG+TGG + chr3_2:75544571-75544590 Msa0425170:CDS 45.0%
TTTCTTGAACCACCACCTAC+AGG - chr3_2:75544583-75544602 None:intergenic 45.0%
!!! GGGTTTTGAGAAGCAGATTG+AGG - chr3_2:75544721-75544740 None:intergenic 45.0%
GGGTTTGAGAATGGTTATGG+TGG + chr3_2:75545009-75545028 Msa0425170:CDS 45.0%
TGGAATGGAATGTTAGGTGG+AGG + chr3_2:75545201-75545220 Msa0425170:CDS 45.0%
GAATGTTAGGTGGAGGATCA+TGG + chr3_2:75545208-75545227 Msa0425170:CDS 45.0%
!!! TATTTATTTTTGAAAAATTT+AGG + chr3_2:75544324-75544343 Msa0425170:intron 5.0%
!!! ATTTATTTTTGAAAAATTTA+GGG + chr3_2:75544325-75544344 Msa0425170:intron 5.0%
!!! TATTTATTTTTGAAAAATTT+AGG + chr3_2:75544324-75544343 Msa0425170:intron 5.0%
!!! ATTTATTTTTGAAAAATTTA+GGG + chr3_2:75544325-75544344 Msa0425170:intron 5.0%
! AATCAAGAGGGTTCTGGTGG+TGG + chr3_2:75545048-75545067 Msa0425170:CDS 50.0%
!!! CTTTTGGTAATGTGGGGGAG+TGG + chr3_2:75545367-75545386 Msa0425170:three_prime_UTR 50.0%
! AATCAAGAGGGTTCTGGTGG+TGG + chr3_2:75545048-75545067 Msa0425170:CDS 50.0%
!!! CTTTTGGTAATGTGGGGGAG+TGG + chr3_2:75545367-75545386 Msa0425170:three_prime_UTR 50.0%
!! CAAGAGGGTTCTGGTGGTGG+TGG + chr3_2:75545051-75545070 Msa0425170:CDS 60.0%
!! CAAGAGGGTTCTGGTGGTGG+TGG + chr3_2:75545051-75545070 Msa0425170:CDS 60.0%
GGACACAGCTCAGTGGGCAC+AGG + chr3_2:75543909-75543928 Msa0425170:CDS 65.0%
!! GAGGGTTCTGGTGGTGGTGG+TGG + chr3_2:75545054-75545073 Msa0425170:CDS 65.0%
!! GGTTCTGGTGGTGGTGGTGG+TGG + chr3_2:75545057-75545076 Msa0425170:CDS 65.0%
!! GTGGTGGTGGTGGTGGTGCA+AGG + chr3_2:75545064-75545083 Msa0425170:CDS 65.0%
GGACACAGCTCAGTGGGCAC+AGG + chr3_2:75543909-75543928 Msa0425170:CDS 65.0%
!! GAGGGTTCTGGTGGTGGTGG+TGG + chr3_2:75545054-75545073 Msa0425170:CDS 65.0%
!! GGTTCTGGTGGTGGTGGTGG+TGG + chr3_2:75545057-75545076 Msa0425170:CDS 65.0%
!! GTGGTGGTGGTGGTGGTGCA+AGG + chr3_2:75545064-75545083 Msa0425170:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 75543754 75545568 75543754 ID=Msa0425170;Name=Msa0425170
chr3_2 mRNA 75543754 75545568 75543754 ID=Msa0425170-mRNA-1;Parent=Msa0425170;Name=Msa0425170-mRNA-1;_AED=0.00;_eAED=0.00;_QI=153|1|1|1|0|0.5|2|335|303
chr3_2 exon 75543754 75543930 75543754 ID=Msa0425170-mRNA-1:exon:19358;Parent=Msa0425170-mRNA-1
chr3_2 exon 75544346 75545568 75544346 ID=Msa0425170-mRNA-1:exon:19359;Parent=Msa0425170-mRNA-1
chr3_2 five_prime_UTR 75543754 75543906 75543754 ID=Msa0425170-mRNA-1:five_prime_utr;Parent=Msa0425170-mRNA-1
chr3_2 CDS 75543907 75543930 75543907 ID=Msa0425170-mRNA-1:cds;Parent=Msa0425170-mRNA-1
chr3_2 CDS 75544346 75545233 75544346 ID=Msa0425170-mRNA-1:cds;Parent=Msa0425170-mRNA-1
chr3_2 three_prime_UTR 75545234 75545568 75545234 ID=Msa0425170-mRNA-1:three_prime_utr;Parent=Msa0425170-mRNA-1
Gene Sequence

>Msa0425170

ATGGACACAGCTCAGTGGGCACAGGGGAATATTGGATTGGTTAAACAAATGGATGGATCAACTTCAAATTCAAAACCAACACCTTCTATGTTAGAGAGAAAAGCAAGGCCACAAAAAGATCAAGCTTTAAACTGTCCAAGGTGCAATTCAACTAACACAAAATTCTGTTACTACAATAACTATAGCCTCTCACAACCAAGGTACTTTTGCAAAACCTGTAGAAGGTATTGGACTGAAGGTGGTTCTTTAAGAAATGTTCCTGTAGGTGGTGGTTCAAGAAAAAACAAAAGATCAACCTCATCATCATCACCTTCAATCTCACAATCACAACCTCCATCATCAATAACAAAAAATATTATCATTAATCCTGATCTTGCTACAGCACAAAATAATTTCCCTCAATCTGCTTCTCAAAACCCTAAGATCCATCAAGGACAAGATCTTAACCTAGCTTATCCACCACAAACAACTGAGGATAATTATAATACCATATCTAAATTCATTGAGCTTCCTTACACAACTGATCAAGACAAAACTACAAGTGCTATGGAGCTTCTGAAAACTGCTTCTTCATCAAGGGGTTTGAATTCTTTTATGCCTATGACTTTGTCTGAGTCTAGTGCAATGTATAATTCAAGTGGTTTTGCTTTGCAAGATTTTAAGCTTGGGGTTAATTTTGGTTTAGAAGGGTTTGAGAATGGTTATGGTGGTTTACAAGGGATTAATAATCAAGAGGGTTCTGGTGGTGGTGGTGGTGGTGCAAGGATGTTGTTTCCTGTTGTAGAGGATCAGTTGAATAATAAGCAGCAGCAACAAATTCCAAATAGTGGTGAGTTTGAACATCAGCAAAATAGAACTCAAGGTGATTCTACTGGTTATTGGAATGGAATGTTAGGTGGAGGATCATGGTAG

Protein sequence

>Msa0425170

MDTAQWAQGNIGLVKQMDGSTSNSKPTPSMLERKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSTSSSSPSISQSQPPSSITKNIIINPDLATAQNNFPQSASQNPKIHQGQDLNLAYPPQTTEDNYNTISKFIELPYTTDQDKTTSAMELLKTASSSRGLNSFMPMTLSESSAMYNSSGFALQDFKLGVNFGLEGFENGYGGLQGINNQEGSGGGGGGARMLFPVVEDQLNNKQQQQIPNSGEFEHQQNRTQGDSTGYWNGMLGGGSW*