AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0615200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0615200 MtrunA17_Chr4g0051421 69.956 902 169 11 1 807 1 895 0.0 1191
Msa0615200 MtrunA17_Chr4g0051421 79.434 530 46 6 4 470 543 1072 0.0 801
Msa0615200 MtrunA17_Chr4g0051421 80.290 345 67 1 469 813 23 366 0.0 551
Msa0615200 MtrunA17_Chr4g0051411 66.916 535 109 9 1 470 1 532 0.0 664
Msa0615200 MtrunA17_Chr4g0051411 75.921 353 83 1 463 815 16 366 6.47e-178 523
Msa0615200 MtrunA17_Chr4g0051381 65.794 535 115 7 1 470 1 532 0.0 662
Msa0615200 MtrunA17_Chr4g0051381 75.921 353 82 2 461 813 15 364 0.0 530
Msa0615200 MtrunA17_Chr4g0051211 57.992 488 140 9 58 483 2 486 0.0 544
Msa0615200 MtrunA17_Chr4g0051211 65.176 313 102 2 516 824 2 311 2.71e-141 427
Msa0615200 MtrunA17_Chr4g0051441 52.797 572 167 13 1 476 53 617 1.61e-173 514
Msa0615200 MtrunA17_Chr4g0051441 70.130 385 78 2 472 825 80 458 8.47e-168 500
Msa0615200 MtrunA17_Chr2g0292971 45.677 532 212 12 5 470 6 526 2.03e-149 449
Msa0615200 MtrunA17_Chr2g0292971 48.673 339 169 2 477 813 27 362 2.35e-114 358
Msa0615200 MtrunA17_Chr2g0293121 43.962 530 218 12 8 470 3 520 5.27e-146 441
Msa0615200 MtrunA17_Chr2g0293121 52.528 356 164 3 471 825 15 366 3.64e-123 382
Msa0615200 MtrunA17_Chr3g0079791 46.226 530 208 12 6 470 2 519 3.19e-144 436
Msa0615200 MtrunA17_Chr3g0079791 50.432 347 162 3 469 813 15 353 4.18e-108 342
Msa0615200 MtrunA17_Chr3g0079831 46.095 525 213 11 8 470 17 533 8.28e-144 435
Msa0615200 MtrunA17_Chr3g0079831 49.733 374 175 5 446 815 5 369 4.16e-109 345
Msa0615200 MtrunA17_Chr2g0293021 47.438 527 200 11 8 470 11 524 3.84e-143 433
Msa0615200 MtrunA17_Chr2g0293021 58.951 324 130 1 477 800 30 350 3.27e-115 360
Msa0615200 MtrunA17_Chr3g0079801 45.437 526 218 11 6 470 2 519 5.18e-141 427
Msa0615200 MtrunA17_Chr3g0079801 50.716 349 162 3 469 815 15 355 4.03e-109 344
Msa0615200 MtrunA17_Chr2g0292991 46.226 530 211 11 6 470 4 524 2.67e-140 425
Msa0615200 MtrunA17_Chr2g0292991 57.751 329 136 1 472 800 25 350 3.26e-116 363
Msa0615200 MtrunA17_Chr2g0293191 45.488 543 226 10 1 478 31 568 2.12e-139 424
Msa0615200 MtrunA17_Chr2g0293191 52.722 349 165 0 473 821 54 402 1.79e-117 367
Msa0615200 MtrunA17_Chr2g0293161 45.203 542 227 10 2 478 1 537 3.57e-139 423
Msa0615200 MtrunA17_Chr2g0293161 52.722 349 165 0 473 821 23 371 1.92e-118 369
Msa0615200 MtrunA17_Chr4g0051541 47.544 509 190 12 30 470 28 527 2.60e-138 420
Msa0615200 MtrunA17_Chr4g0051541 51.479 338 159 2 478 813 29 363 1.99e-102 327
Msa0615200 MtrunA17_Chr4g0051551 44.952 525 216 12 12 470 38 555 3.54e-135 413
Msa0615200 MtrunA17_Chr4g0051551 49.422 346 169 3 470 813 50 391 8.82e-106 337
Msa0615200 MtrunA17_Chr2g0293031 45.047 535 222 14 3 470 6 535 4.94e-131 402
Msa0615200 MtrunA17_Chr2g0293031 50.143 349 167 3 480 825 38 382 2.40e-103 330
Msa0615200 MtrunA17_Chr4g0048311 45.276 508 203 11 31 470 37 537 8.53e-128 394
Msa0615200 MtrunA17_Chr4g0048311 54.925 335 147 1 479 813 38 368 1.67e-114 359
Msa0615200 MtrunA17_Chr4g0028611 43.396 530 227 10 8 474 33 552 1.25e-127 393
Msa0615200 MtrunA17_Chr4g0028611 53.276 351 152 5 469 817 45 385 4.52e-110 347
Msa0615200 MtrunA17_Chr4g0048361 43.561 528 229 12 7 474 9 527 9.34e-127 390
Msa0615200 MtrunA17_Chr4g0048361 51.445 346 155 4 474 817 26 360 3.33e-104 331
Msa0615200 MtrunA17_Chr6g0457061 43.726 526 228 11 8 472 7 525 2.92e-126 389
Msa0615200 MtrunA17_Chr6g0457061 52.450 347 154 4 472 817 24 360 7.66e-105 333
Msa0615200 MtrunA17_Chr6g0457031 43.346 526 230 11 8 472 7 525 1.22e-125 388
Msa0615200 MtrunA17_Chr6g0457031 52.647 340 150 4 479 817 31 360 3.02e-104 332
Msa0615200 MtrunA17_Chr2g0293041 43.825 502 214 10 33 470 40 537 1.14e-124 385
Msa0615200 MtrunA17_Chr2g0293041 53.894 321 144 2 480 800 40 356 3.00e-105 335
Msa0615200 MtrunA17_Chr4g0046581 43.137 510 220 10 32 476 32 536 9.64e-123 380
Msa0615200 MtrunA17_Chr4g0046581 51.744 344 153 4 479 817 32 367 2.86e-106 337
Msa0615200 MtrunA17_Chr4g0048351 43.114 501 217 10 32 470 44 538 8.02e-120 373
Msa0615200 MtrunA17_Chr4g0048351 49.573 351 168 3 469 817 32 375 4.46e-106 337
Msa0615200 MtrunA17_Chr4g0051531 43.619 525 230 10 10 472 631 1151 1.65e-119 389
Msa0615200 MtrunA17_Chr4g0051531 43.750 512 218 12 32 478 39 545 1.13e-116 381
Msa0615200 MtrunA17_Chr4g0051531 53.757 346 157 1 480 825 654 996 2.56e-109 361
Msa0615200 MtrunA17_Chr4g0051531 52.778 324 147 2 479 799 39 359 6.69e-98 330
Msa0615200 MtrunA17_Chr2g0288611 42.644 469 211 9 57 473 4 466 2.37e-108 340
Msa0615200 MtrunA17_Chr2g0288611 52.805 303 137 1 515 817 4 300 6.79e-98 313
Msa0615200 MtrunA17_Chr1g0188271 37.652 494 252 10 46 486 58 548 2.72e-88 290
Msa0615200 MtrunA17_Chr1g0188271 46.278 309 158 3 504 809 58 361 2.04e-74 253
Msa0615200 MtrunA17_Chr4g0048331 38.107 412 179 11 113 470 1 390 1.50e-81 267
Msa0615200 MtrunA17_Chr4g0048331 48.261 230 113 2 571 799 1 225 6.13e-70 236
Msa0615200 MtrunA17_Chr3g0079821 45.852 229 94 6 268 470 1 225 1.60e-52 182
Msa0615200 MtrunA17_Chr2g0320381 53.086 81 34 1 605 685 36 112 1.48e-23 96.7
Msa0615200 MtrunA17_Chr2g0320381 51.852 81 31 2 143 219 36 112 2.02e-20 87.8
Msa0615200 MtrunA17_Chr2g0320371 60.000 45 18 0 575 619 1 45 6.24e-13 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0615200 AT2G34790.1 42.642 530 227 15 9 472 11 529 7.42e-135 412
Msa0615200 AT2G34790.1 44.444 351 188 3 472 818 25 372 2.35e-97 314
Msa0615200 AT5G44400.1 44.717 530 217 14 12 470 9 533 3.84e-134 410
Msa0615200 AT5G44400.1 48.974 341 163 5 478 813 33 367 3.01e-101 324
Msa0615200 AT5G44440.1 44.653 533 224 13 2 470 1 526 2.63e-132 405
Msa0615200 AT5G44440.1 52.436 349 156 2 479 826 30 369 1.27e-111 351
Msa0615200 AT4G20820.1 43.019 530 234 12 2 470 1 523 5.88e-132 404
Msa0615200 AT4G20820.1 48.459 357 173 2 470 826 27 372 1.38e-107 341
Msa0615200 AT5G44440.2 44.653 533 224 13 2 470 71 596 2.32e-131 405
Msa0615200 AT5G44440.2 52.436 349 156 2 479 826 100 439 2.95e-110 350
Msa0615200 AT5G44390.1 41.604 536 245 15 3 472 6 539 1.94e-128 395
Msa0615200 AT5G44390.1 46.667 345 173 5 469 808 26 364 1.46e-97 315
Msa0615200 AT1G30760.2 44.813 482 200 11 46 472 79 549 6.41e-127 392
Msa0615200 AT1G30760.2 47.801 341 169 4 478 813 51 387 3.89e-97 314
Msa0615200 AT1G30760.1 44.813 482 200 11 46 472 61 531 7.13e-127 391
Msa0615200 AT1G30760.1 47.801 341 169 4 478 813 33 369 3.06e-97 313
Msa0615200 AT5G44410.1 43.643 527 229 13 4 470 8 526 3.21e-126 389
Msa0615200 AT5G44410.1 52.083 336 145 4 469 802 26 347 6.00e-98 315
Msa0615200 AT5G44360.1 43.258 534 232 14 1 470 1 527 3.54e-126 389
Msa0615200 AT5G44360.1 50.585 342 152 8 478 813 31 361 9.03e-96 310
Msa0615200 AT5G44360.2 43.258 534 232 14 1 470 17 543 4.35e-126 390
Msa0615200 AT5G44360.2 50.585 342 152 8 478 813 47 377 1.41e-95 310
Msa0615200 AT5G44380.1 44.382 534 228 13 3 470 6 536 5.95e-122 379
Msa0615200 AT5G44380.1 48.680 341 164 4 478 813 36 370 5.14e-90 295
Msa0615200 AT5G44380.2 44.382 534 228 13 3 470 46 576 1.44e-121 379
Msa0615200 AT5G44380.2 48.680 341 164 4 478 813 76 410 1.54e-89 295
Msa0615200 AT1G11770.1 42.231 502 225 10 32 472 31 528 1.98e-119 372
Msa0615200 AT1G11770.1 50.000 322 154 2 479 799 31 346 4.14e-98 316
Msa0615200 AT1G26420.1 42.155 529 237 13 4 470 1 522 5.61e-119 370
Msa0615200 AT1G26420.1 50.146 343 164 5 473 813 22 359 3.87e-104 332
Msa0615200 AT1G30730.1 41.065 526 237 11 8 470 7 522 2.41e-117 366
Msa0615200 AT1G30730.1 48.295 352 176 4 476 825 24 371 3.36e-99 318
Msa0615200 AT1G30700.1 41.825 526 236 12 9 470 4 523 3.83e-117 365
Msa0615200 AT1G30700.1 51.176 340 160 2 480 817 28 363 6.50e-100 320
Msa0615200 AT1G26380.1 43.103 522 224 15 13 470 10 522 1.41e-116 364
Msa0615200 AT1G26380.1 50.882 340 154 4 479 813 28 359 1.27e-102 328
Msa0615200 AT4G20840.1 41.551 503 229 10 31 472 36 534 3.32e-116 363
Msa0615200 AT4G20840.1 48.447 322 159 3 479 799 37 352 7.23e-95 307
Msa0615200 AT4G20860.1 44.639 457 199 10 63 470 75 526 8.13e-116 362
Msa0615200 AT4G20860.1 48.997 349 160 6 473 813 22 360 1.23e-95 309
Msa0615200 AT1G34575.1 43.539 503 212 14 30 470 29 521 4.29e-114 358
Msa0615200 AT1G34575.1 51.051 333 149 5 478 807 30 351 7.24e-95 307
Msa0615200 AT1G26400.1 40.525 533 239 15 4 470 1 521 1.85e-112 353
Msa0615200 AT1G26400.1 50.147 339 156 5 480 813 29 359 4.35e-101 323
Msa0615200 AT1G30710.1 41.255 526 235 14 8 470 11 525 2.69e-112 353
Msa0615200 AT1G30710.1 51.198 334 147 5 480 807 32 355 2.91e-98 316
Msa0615200 AT1G26410.1 43.800 500 215 15 25 470 59 546 1.07e-111 352
Msa0615200 AT1G26410.1 51.343 335 157 5 480 813 53 382 1.11e-102 328
Msa0615200 AT4G20800.1 41.257 509 233 12 23 470 19 522 3.41e-111 350
Msa0615200 AT4G20800.1 48.060 335 170 1 479 813 28 358 1.17e-94 306
Msa0615200 AT1G01980.1 40.037 537 252 12 2 472 1 533 1.17e-110 349
Msa0615200 AT1G01980.1 49.390 328 154 4 479 800 31 352 3.30e-87 287
Msa0615200 AT1G30740.1 41.210 529 238 12 10 472 6 527 4.56e-110 347
Msa0615200 AT1G30740.1 48.930 327 158 3 479 802 28 348 2.05e-87 288
Msa0615200 AT1G30740.2 41.210 529 238 12 10 472 9 530 4.93e-110 347
Msa0615200 AT1G30740.2 48.930 327 158 3 479 802 31 351 1.96e-87 288
Msa0615200 AT1G26390.1 44.231 468 201 10 56 470 64 524 1.94e-109 345
Msa0615200 AT1G26390.1 50.298 336 162 3 479 813 28 359 1.05e-96 312
Msa0615200 AT4G20830.1 41.393 517 238 10 26 481 32 544 2.58e-109 347
Msa0615200 AT4G20830.1 47.531 324 163 3 478 800 37 354 4.01e-85 283
Msa0615200 AT1G30720.1 41.916 501 222 10 33 470 29 523 2.85e-109 345
Msa0615200 AT1G30720.1 49.425 348 170 4 480 825 29 372 8.27e-96 310
Msa0615200 AT4G20830.2 41.535 508 232 10 26 472 32 535 1.64e-108 343
Msa0615200 AT4G20830.2 47.678 323 162 3 478 799 37 353 9.89e-86 283
Msa0615200 AT2G34810.1 40.631 507 231 10 31 470 33 536 1.53e-104 333
Msa0615200 AT2G34810.1 48.071 337 169 4 479 813 34 366 3.82e-89 292

Find 162 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATCTGGAGGCCATGATTT+TGG 0.130838 4_2:-64637982 None:intergenic
AGATTATGGTTGCTTGAATA+TGG 0.170155 4_2:-64642442 None:intergenic
AAATTATGGCTGTTTGAATA+TGG 0.187785 4_2:-64637955 None:intergenic
GCTACAAGCAAGCTAGTATT+TGG 0.235073 4_2:+64639169 Msa0615200:CDS
CGCCTTTCGGAAATTGAAAA+AGG 0.237346 4_2:-64638729 None:intergenic
AAAACTCCTATTCCTGAAAA+TGG 0.251375 4_2:+64638832 Msa0615200:CDS
CAATGGGTGAAGATTTGTTT+TGG 0.263104 4_2:+64638344 Msa0615200:CDS
TTATTTCAAGCTTTGTTTCT+TGG 0.263131 4_2:+64643103 Msa0615200:CDS
GGTGGTGGAGGAGCAAGTTT+TGG 0.286201 4_2:+64642863 Msa0615200:CDS
CACTTCAGTGGAGAACCTTT+TGG 0.287221 4_2:-64643241 None:intergenic
GGTGGTGGAGGAGCAAGTTT+TGG 0.291186 4_2:+64638376 Msa0615200:CDS
GTTTCAAAGTCTCCAAGAAT+TGG 0.300797 4_2:+64639090 Msa0615200:CDS
CAATGGGTGAGGATTTGTTT+TGG 0.303294 4_2:+64642831 Msa0615200:CDS
GTGAGCATCAATTATATTAT+CGG 0.307370 4_2:-64638284 None:intergenic
TTTGCTTTGTAAATAAATCT+TGG 0.313472 4_2:-64638796 None:intergenic
GTTTCCTTATGGTGGAATAA+TGG 0.315442 4_2:+64638915 Msa0615200:CDS
GTGACAATTACAAGAGGTTT+TGG 0.315638 4_2:-64642404 None:intergenic
CACTTCAGTGGTGGTGGATA+TGG 0.317127 4_2:+64642719 Msa0615200:CDS
GGAACCTTGGTTCGTAAATA+TGG 0.319156 4_2:+64638253 Msa0615200:CDS
CCTTTGAAAGACAATATTGA+TGG 0.321417 4_2:-64638542 None:intergenic
ATTCCTGAAAATGGATTAGA+AGG 0.350473 4_2:+64638841 Msa0615200:CDS
ACAGTAGGACAAACACTTGC+AGG 0.361034 4_2:-64642683 None:intergenic
TTGAGTTATGTGAATAACTA+TGG 0.361143 4_2:-64642283 None:intergenic
CCCCACTACGGGTTCGAATC+TGG 0.361159 4_2:-64637997 None:intergenic
TAGTTGATATACCCAATTCT+TGG 0.362017 4_2:-64639102 None:intergenic
ATATTCATTACCAGGTTGAT+TGG 0.363341 4_2:+64638992 Msa0615200:intron
GGAACCTTGTTGCGTAAATA+TGG 0.364610 4_2:+64642740 Msa0615200:CDS
TACTGGTGAGTAAGAGGAAT+TGG 0.365636 4_2:-64637849 None:intergenic
TATTGATGTGTAAGAGGAAT+TGG 0.365680 4_2:-64642336 None:intergenic
TTGCTTTGTAAATAAATCTT+GGG 0.367450 4_2:-64638795 None:intergenic
AATCTGTAGGCCATGGTATT+GGG 0.371585 4_2:-64642468 None:intergenic
AACTATAGAGACCTTGATAT+TGG 0.379359 4_2:+64639120 Msa0615200:intron
GAATCTGTAGGCCATGGTAT+TGG 0.381926 4_2:-64642469 None:intergenic
CAAGAACAACTTCAAAAGAT+TGG 0.382060 4_2:+64639206 Msa0615200:CDS
CCATATCATCATTGCACCTT+TGG 0.387821 4_2:-64638893 None:intergenic
CTTGGAGACTTTGAAACAAA+AGG 0.388823 4_2:-64639084 None:intergenic
ATGGTATTGGGAACAGATTA+TGG 0.392865 4_2:-64642456 None:intergenic
ATAGACAAATATGAGCTTAG+AGG 0.395578 4_2:-64637692 None:intergenic
CAGCTGGGAAACCGAGATTT+CGG 0.397206 4_2:-64638180 None:intergenic
GTAAACACAGTAACAATTGA+TGG 0.397213 4_2:-64642923 None:intergenic
CTACAAGCAAGCTAGTATTT+GGG 0.397390 4_2:+64639170 Msa0615200:CDS
CCAAAGGTGCAATGATGATA+TGG 0.399938 4_2:+64638893 Msa0615200:CDS
ACTTCAGGCAATGCGCCTTT+CGG 0.404901 4_2:-64638742 None:intergenic
GTAAACACCGTCACAGTTGA+TGG 0.407633 4_2:-64638436 None:intergenic
AATTATGGCTGTTTGAATAT+GGG 0.408415 4_2:-64637954 None:intergenic
AAGCGGCGGCCACGACTTTG+AGG 0.408872 4_2:+64642499 Msa0615200:CDS
TTTCAAAGTCTCCAAGAATT+GGG 0.412921 4_2:+64639091 Msa0615200:CDS
AAAATGGATTAGAAGGAATA+TGG 0.414702 4_2:+64638848 Msa0615200:CDS
AAAATTGTATTGAAATGAGT+TGG 0.420053 4_2:+64638689 Msa0615200:CDS
AGATAAACTCATTCCCTTGA+TGG 0.422488 4_2:+64638633 Msa0615200:intron
CAAGAGAAGTTTCCTGAGCT+TGG 0.427109 4_2:+64643154 Msa0615200:CDS
ACGAGATCAATGACAACAAA+TGG 0.429670 4_2:-64638058 None:intergenic
ATGAGATCAATGACGACAAA+TGG 0.430921 4_2:-64642545 None:intergenic
GTGATGATGACAAGTGGTTT+AGG 0.431669 4_2:-64637917 None:intergenic
TGGGCTATTAGGGGTGGTGG+AGG 0.435638 4_2:+64642851 Msa0615200:CDS
GATTATGGTTGCTTGAATAT+GGG 0.436969 4_2:-64642441 None:intergenic
GAAGTTTCCTGAGCTTGGTT+TGG 0.437875 4_2:+64643159 Msa0615200:CDS
ATGATGATATGGTTTCCTTA+TGG 0.438370 4_2:+64638904 Msa0615200:CDS
AATATTGTATTGAAATGAGT+TGG 0.439258 4_2:+64643188 Msa0615200:CDS
TTTCAAGCTTTGTTTCTTGG+AGG 0.440275 4_2:+64643106 Msa0615200:CDS
GCTGGTGCTTGTCCTACAAT+AGG 0.442267 4_2:+64638199 Msa0615200:CDS
AAATGGAACTTCTGAAACAT+AGG 0.442493 4_2:-64638041 None:intergenic
GTTCTGTTAAGCAACACTTC+AGG 0.449144 4_2:-64638757 None:intergenic
TGAAATGAGTTGGATTGAAT+CGG 0.452927 4_2:+64638699 Msa0615200:CDS
CACTTCAGTGGTGGTGGCTA+TGG 0.458500 4_2:+64638232 Msa0615200:CDS
TGAGTAAGAGGAATTGGTTT+TGG 0.462718 4_2:-64637843 None:intergenic
TTTGAGTACTGGTGAGTAAG+AGG 0.466502 4_2:-64637855 None:intergenic
GCTTGAAATAAAACTAGTAC+TGG 0.469012 4_2:-64643091 None:intergenic
TTGGAGTATTGATGTGTAAG+AGG 0.474833 4_2:-64642342 None:intergenic
TCCAGATTCGAACCCGTAGT+GGG 0.475163 4_2:+64637996 Msa0615200:CDS
TTACCAGGTTGATTGGCAAC+AGG 0.475690 4_2:+64638999 Msa0615200:intron
GTGAGCATCAATGATGTTAT+CGG 0.478746 4_2:-64642771 None:intergenic
ATAATTTGTTCCCAAAATCA+TGG 0.478899 4_2:+64637971 Msa0615200:CDS
AAAGTTTAGAGGATCAACTT+TGG 0.482938 4_2:-64639241 None:intergenic
TGTAGAAAGCAAAACTGCTT+GGG 0.483507 4_2:+64638105 Msa0615200:CDS
TGAGTTGTATATTTGAGTAC+TGG 0.484352 4_2:-64637866 None:intergenic
GAACAAAAGTTTCCTGAGTT+GGG 0.486919 4_2:+64638655 Msa0615200:CDS
AAAACTGCATGGGTTCAATC+TGG 0.487082 4_2:+64642602 Msa0615200:CDS
CGAAATCTCGGTTTCCCAGC+TGG 0.487820 4_2:+64638181 Msa0615200:CDS
TGTCCACCAACACCTATTGT+AGG 0.487897 4_2:-64638211 None:intergenic
AAAACTGCTTGGGTTCAGTC+TGG 0.489702 4_2:+64638115 Msa0615200:CDS
TGGGCTATTAGAGGTGGTGG+AGG 0.490480 4_2:+64638364 Msa0615200:CDS
ATTGGTGTGAATAACATTGA+TGG 0.497447 4_2:+64639138 Msa0615200:CDS
GTTTACTGTTGCAAAAGCAT+TGG 0.502433 4_2:+64638453 Msa0615200:CDS
TGTGTAAGAGGAATTGGCTT+TGG 0.503548 4_2:-64642330 None:intergenic
GTATCCATTATTCCACCATA+AGG 0.507512 4_2:-64638919 None:intergenic
ATTGTAGGACAAGCACCAGC+TGG 0.507999 4_2:-64638196 None:intergenic
GATGAATATTGTCTGGCAAA+GGG 0.514394 4_2:+64643030 Msa0615200:CDS
ATGTAGAAAGCAAAACTGCT+TGG 0.516128 4_2:+64638104 Msa0615200:CDS
GGAACAAAAGTTTCCTGAGT+TGG 0.517366 4_2:+64638654 Msa0615200:CDS
ATATAGAGATGAATATTGTC+TGG 0.517958 4_2:+64643023 Msa0615200:CDS
AATAACTATGGAGACATTGA+AGG 0.523986 4_2:-64642271 None:intergenic
TCTCTAACCAAACCAAGCTC+AGG 0.524526 4_2:-64643166 None:intergenic
AGCGGCGGCCACGACTTTGA+GGG 0.526742 4_2:+64642500 Msa0615200:CDS
TCTCTAACCACACCCAACTC+AGG 0.530976 4_2:-64638667 None:intergenic
TGTCCTACTGTAGGTGTTGG+TGG 0.531106 4_2:+64642695 Msa0615200:CDS
GTTTCTTGACAGAGAAGCAA+TGG 0.534469 4_2:+64642814 Msa0615200:CDS
AGATGAATATTGTCTGGCAA+AGG 0.537229 4_2:+64643029 Msa0615200:CDS
AATAACTAGAAAGACATTGA+AGG 0.537999 4_2:-64637784 None:intergenic
GTTCAGTCTGGTGCAACACT+TGG 0.538464 4_2:+64638127 Msa0615200:CDS
TGTTATTCACACCAATATCA+AGG 0.539812 4_2:-64639131 None:intergenic
CTCCAGATTCGAACCCGTAG+TGG 0.540664 4_2:+64637995 Msa0615200:CDS
TTTCTTGACAGACAAGCAAT+GGG 0.551117 4_2:+64638328 Msa0615200:intron
CCATCAATATTGTCTTTCAA+AGG 0.551890 4_2:+64638542 Msa0615200:CDS
GTTTCTTGACAGACAAGCAA+TGG 0.552283 4_2:+64638327 Msa0615200:intron
AAAGTTTCCTGAGTTGGGTG+TGG 0.552427 4_2:+64638660 Msa0615200:CDS
GCAAGTGTTTGTCCTACTGT+AGG 0.562475 4_2:+64642686 Msa0615200:CDS
TTTCTTGACAGAGAAGCAAT+GGG 0.565816 4_2:+64642815 Msa0615200:CDS
AGGAAACTTCTCTTGAACCA+AGG 0.566167 4_2:-64643146 None:intergenic
GGTGGACACTTCAGTGGTGG+TGG 0.566542 4_2:+64642713 Msa0615200:CDS
TGTAGATAAACTCATACCCT+TGG 0.566543 4_2:+64643129 Msa0615200:CDS
GGTGGACACTTCAGTGGTGG+TGG 0.569924 4_2:+64638226 Msa0615200:CDS
GTTTGTCCTACTGTAGGTGT+TGG 0.572069 4_2:+64642692 Msa0615200:CDS
CAACAAAGCTTGTTCACAAG+TGG 0.578289 4_2:+64642972 Msa0615200:CDS
TGTTCACAAGTGGCAGTATG+TGG 0.580228 4_2:+64638495 Msa0615200:CDS
ATGATATGGTTTCCTTATGG+TGG 0.582909 4_2:+64638907 Msa0615200:CDS
ATGGCTGTTTGAATATGGGA+AGG 0.583461 4_2:-64637950 None:intergenic
CTACAAAGCTTGTTCACAAG+TGG 0.585250 4_2:+64638485 Msa0615200:CDS
TGCTCACATAATTGATGTGA+AGG 0.585552 4_2:+64638300 Msa0615200:CDS
TGCTCACATAATTGATGTGA+AGG 0.585552 4_2:+64642787 Msa0615200:CDS
GGAAACTTCTCTTGAACCAA+GGG 0.586930 4_2:-64643145 None:intergenic
TGACAGAGAAGCAATGGGTG+AGG 0.588886 4_2:+64642820 Msa0615200:CDS
ACATAATTGATGTGAAGGGT+AGG 0.589985 4_2:+64638305 Msa0615200:CDS
ACATAATTGATGTGAAGGGT+AGG 0.589985 4_2:+64642792 Msa0615200:CDS
TCTGTTAAGCAACACTTCAG+TGG 0.592107 4_2:-64643253 None:intergenic
AAGTGGTTTAGGTGTTGTGT+AGG 0.592233 4_2:-64637906 None:intergenic
TGTCCTACAATAGGTGTTGG+TGG 0.592774 4_2:+64638208 Msa0615200:CDS
CCAGATTCGAACCCGTAGTG+GGG 0.593132 4_2:+64637997 Msa0615200:CDS
TGAATATGGGATATTTCTAG+AGG 0.601628 4_2:-64642428 None:intergenic
GCTTGTCCTACAATAGGTGT+TGG 0.602006 4_2:+64638205 Msa0615200:CDS
TACAAGCAAGCTAGTATTTG+GGG 0.602138 4_2:+64639171 Msa0615200:CDS
TGGTGGTGGCTATGGAACCT+TGG 0.603059 4_2:+64638240 Msa0615200:CDS
TTGTAGGACAAGCACCAGCT+GGG 0.603228 4_2:-64638195 None:intergenic
TGAATATGGGAAGGTTCTAG+AGG 0.607797 4_2:-64637941 None:intergenic
CAGGTTGATTGGCAACAGGA+AGG 0.608073 4_2:+64639003 Msa0615200:intron
AGGATAGACCCTCAAAGTCA+TGG 0.608222 4_2:-64638021 None:intergenic
CAGATTCGAACCCGTAGTGG+GGG 0.608743 4_2:+64637998 Msa0615200:CDS
AAGACCATATTTACGCAACA+AGG 0.610440 4_2:-64642744 None:intergenic
GTTCAATCTGGTGCAACACT+TGG 0.613052 4_2:+64642614 Msa0615200:CDS
CAGTAGGACAAACACTTGCA+GGG 0.613601 4_2:-64642682 None:intergenic
GCAACAGGAAGGTGATGAGG+TGG 0.620727 4_2:+64639014 Msa0615200:CDS
GAATTCGAATCTGTAGGCCA+TGG 0.621127 4_2:-64642475 None:intergenic
TCAAGTTCCATCAACTGTGA+CGG 0.625682 4_2:+64638429 Msa0615200:CDS
GTTGGTGGACACTTCAGTGG+TGG 0.625730 4_2:+64638223 Msa0615200:CDS
GTTGGTGGACACTTCAGTGG+TGG 0.625730 4_2:+64642710 Msa0615200:CDS
TTTCATGAAGATGGTGCCAA+AGG 0.627110 4_2:+64638877 Msa0615200:intron
AAGACCATATTTACGAACCA+AGG 0.633836 4_2:-64638257 None:intergenic
GGTGTTGGTGGACACTTCAG+TGG 0.638405 4_2:+64642707 Msa0615200:CDS
AGAGGTGTGACAATTACAAG+AGG 0.647102 4_2:-64642410 None:intergenic
CAGATTCGAATTCGAAGCGG+CGG 0.660883 4_2:+64642485 Msa0615200:CDS
TGTCCACCAACACCTACAGT+AGG 0.663218 4_2:-64642698 None:intergenic
CACTACGGGTTCGAATCTGG+AGG 0.666507 4_2:-64637994 None:intergenic
GGTGTTGGTGGACACTTCAG+TGG 0.668243 4_2:+64638220 Msa0615200:CDS
ATAATCTGTTCCCAATACCA+TGG 0.671513 4_2:+64642458 Msa0615200:CDS
AAGACAGACCCTCAAAGTCG+TGG 0.674602 4_2:-64642508 None:intergenic
CGCTTCGAATTCGAATCTGT+AGG 0.689715 4_2:-64642481 None:intergenic
GCTCACATAATTGATGTGAA+GGG 0.694549 4_2:+64638301 Msa0615200:CDS
GCTCACATAATTGATGTGAA+GGG 0.694549 4_2:+64642788 Msa0615200:CDS
AGAGGTGTGATGATGACAAG+TGG 0.700893 4_2:-64637923 None:intergenic
AGTGTTGCTTAACAGAACAC+TGG 0.704218 4_2:+64638762 Msa0615200:CDS
TTGGCAACAGGAAGGTGATG+AGG 0.705230 4_2:+64639011 Msa0615200:CDS
CTACAGATTCGAATTCGAAG+CGG 0.715605 4_2:+64642482 Msa0615200:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGAAAAATTTATAATTACA+TGG + chr4_2:64639059-64639078 Msa0615200:CDS 10.0%
!!! TATCTTTTCTTTATAAATAA+AGG + chr4_2:64639388-64639407 Msa0615200:intron 10.0%
!!! AAACTATTTTACAAAAAAAT+AGG - chr4_2:64641802-64641821 None:intergenic 10.0%
!! AATTTAAATTCAAGTAAAAA+AGG + chr4_2:64643055-64643074 Msa0615200:CDS 10.0%
!! TTCTTTATAAATAAAGGTTT+AGG + chr4_2:64639394-64639413 Msa0615200:intron 15.0%
!! TCTTTATAAATAAAGGTTTA+GGG + chr4_2:64639395-64639414 Msa0615200:intron 15.0%
!!! TTTTTTTATTTGAAAAGAAG+TGG - chr4_2:64641413-64641432 None:intergenic 15.0%
!!! ATACTTTATTTAAGTATGTT+TGG + chr4_2:64641579-64641598 Msa0615200:intron 15.0%
!! GACAATATGTATATAAAATT+TGG - chr4_2:64642062-64642081 None:intergenic 15.0%
!! AGGATAAATTCAAGTAAAAA+AGG + chr4_2:64638562-64638581 Msa0615200:CDS 20.0%
!! AAAATTGTATTGAAATGAGT+TGG + chr4_2:64638689-64638708 Msa0615200:CDS 20.0%
!! TTGCTTTGTAAATAAATCTT+GGG - chr4_2:64638798-64638817 None:intergenic 20.0%
!! TTTGCTTTGTAAATAAATCT+TGG - chr4_2:64638799-64638818 None:intergenic 20.0%
!!! TATAAATTTCCTTTTCTATG+AGG - chr4_2:64638970-64638989 None:intergenic 20.0%
!!! TAAATTAATTTGAGTAGCTA+AGG + chr4_2:64639312-64639331 Msa0615200:intron 20.0%
!! CTTTATAAATAAAGGTTTAG+GGG + chr4_2:64639396-64639415 Msa0615200:intron 20.0%
!! ATATACACATAGAATATCTA+GGG - chr4_2:64639575-64639594 None:intergenic 20.0%
!! AATATACACATAGAATATCT+AGG - chr4_2:64639576-64639595 None:intergenic 20.0%
!! TTGAATAGATTACTAAAGTT+TGG + chr4_2:64639643-64639662 Msa0615200:intron 20.0%
!! ATATGTTTGTGTTTATTGAA+AGG + chr4_2:64639679-64639698 Msa0615200:intron 20.0%
!! AAAATGTTTACAATAAAGCA+TGG - chr4_2:64640488-64640507 None:intergenic 20.0%
!! TACTTGTAATAAAAACTTGA+GGG - chr4_2:64641025-64641044 None:intergenic 20.0%
!!! AATTATACATTTCAAGTGTA+AGG - chr4_2:64641101-64641120 None:intergenic 20.0%
!! GACTAAACTAATTAATTAAG+AGG + chr4_2:64641125-64641144 Msa0615200:intron 20.0%
!! AACTAATTAATTAAGAGGAT+TGG + chr4_2:64641130-64641149 Msa0615200:intron 20.0%
!!! TAATTCTAGTTTAAACATCA+TGG - chr4_2:64641276-64641295 None:intergenic 20.0%
!!! TTAGTTTGCAAATTTTAGAA+TGG + chr4_2:64641371-64641390 Msa0615200:intron 20.0%
!! AAAATGATTTCAATGAAGTT+AGG + chr4_2:64641429-64641448 Msa0615200:intron 20.0%
!!! TAATTTTTATTGGTATATGG+CGG - chr4_2:64642089-64642108 None:intergenic 20.0%
!!! CTCTAATTTTTATTGGTATA+TGG - chr4_2:64642092-64642111 None:intergenic 20.0%
!!! CTATAAGCTCTAATTTTTAT+TGG - chr4_2:64642099-64642118 None:intergenic 20.0%
!! AATATTGTATTGAAATGAGT+TGG + chr4_2:64643188-64643207 Msa0615200:CDS 20.0%
! AATAACTAGAAAGACATTGA+AGG - chr4_2:64637787-64637806 None:intergenic 25.0%
! AATTATGGCTGTTTGAATAT+GGG - chr4_2:64637957-64637976 None:intergenic 25.0%
! AAATTATGGCTGTTTGAATA+TGG - chr4_2:64637958-64637977 None:intergenic 25.0%
!!! ATGATTTTGGGAACAAATTA+TGG - chr4_2:64637972-64637991 None:intergenic 25.0%
!!! ATAATTTGTTCCCAAAATCA+TGG + chr4_2:64637971-64637990 Msa0615200:CDS 25.0%
! GTGAGCATCAATTATATTAT+CGG - chr4_2:64638287-64638306 None:intergenic 25.0%
!! ATATTTCAATCCTTGTTTCT+TGG + chr4_2:64638604-64638623 Msa0615200:intron 25.0%
!!! AAAATGGATTAGAAGGAATA+TGG + chr4_2:64638848-64638867 Msa0615200:CDS 25.0%
! TTTATACCATATTCATTACC+AGG + chr4_2:64638984-64639003 Msa0615200:intron 25.0%
!! TCATTTCTGAAAAAGTTTAG+AGG - chr4_2:64639255-64639274 None:intergenic 25.0%
! TTAATTTATTTGTGTCCCTT+GGG - chr4_2:64639300-64639319 None:intergenic 25.0%
! ATTAATTTATTTGTGTCCCT+TGG - chr4_2:64639301-64639320 None:intergenic 25.0%
! TATACACATAGAATATCTAG+GGG - chr4_2:64639574-64639593 None:intergenic 25.0%
! ACACCATTTAATCAACAAAT+TGG + chr4_2:64639756-64639775 Msa0615200:intron 25.0%
! AATGTAGTTGATTGTTTGTA+AGG - chr4_2:64640002-64640021 None:intergenic 25.0%
! CAGAGTTATACAGAAAAAAT+TGG + chr4_2:64640072-64640091 Msa0615200:intron 25.0%
! AGAATTTACGTAACAAACTT+CGG - chr4_2:64640312-64640331 None:intergenic 25.0%
!!! AAGTTTGTTACGTAAATTCT+GGG + chr4_2:64640312-64640331 Msa0615200:intron 25.0%
! TTTGAGAATTTGATAGAGTT+TGG + chr4_2:64640381-64640400 Msa0615200:intron 25.0%
! TTGAGAATTTGATAGAGTTT+GGG + chr4_2:64640382-64640401 Msa0615200:intron 25.0%
!!! TGGGATAATTTGCTATATTT+TGG + chr4_2:64640401-64640420 Msa0615200:intron 25.0%
!! ATGCTAATTCTAAAAAACTG+CGG - chr4_2:64640593-64640612 None:intergenic 25.0%
! TTTGGATCAGAATCTTTATT+GGG - chr4_2:64640784-64640803 None:intergenic 25.0%
! ATTTGGATCAGAATCTTTAT+TGG - chr4_2:64640785-64640804 None:intergenic 25.0%
! TAAAGATTCTGATCCAAATA+TGG + chr4_2:64640786-64640805 Msa0615200:intron 25.0%
! AAACTTAAACCGTCTATAAA+AGG + chr4_2:64640946-64640965 Msa0615200:intron 25.0%
! ACTTGTAATAAAAACTTGAG+GGG - chr4_2:64641024-64641043 None:intergenic 25.0%
! GTACTTGTAATAAAAACTTG+AGG - chr4_2:64641026-64641045 None:intergenic 25.0%
! AAAGTATGCTAAAACTACAA+TGG - chr4_2:64641566-64641585 None:intergenic 25.0%
!!! CTTATTTCTATAAGATTCCT+AGG + chr4_2:64641702-64641721 Msa0615200:intron 25.0%
! ATAAGCACTTATTTGATAAG+CGG + chr4_2:64641848-64641867 Msa0615200:intron 25.0%
! ATAAGCACTTATTTGATAAG+CGG + chr4_2:64641848-64641867 Msa0615200:intron 25.0%
! TTGAGTTATGTGAATAACTA+TGG - chr4_2:64637799-64637818 None:intergenic 25.0%
! ATATAGAGATGAATATTGTC+TGG + chr4_2:64643023-64643042 Msa0615200:CDS 25.0%
!!! TTATTTCAAGCTTTGTTTCT+TGG + chr4_2:64643103-64643122 Msa0615200:CDS 25.0%
!!! TACTTTTTTCAGTTTCCAAA+AGG + chr4_2:64643226-64643245 Msa0615200:CDS 25.0%
ATAGACAAATATGAGCTTAG+AGG - chr4_2:64637695-64637714 None:intergenic 30.0%
TGAGTTGTATATTTGAGTAC+TGG - chr4_2:64637869-64637888 None:intergenic 30.0%
!! AAATGGAACTTCTGAAACAT+AGG - chr4_2:64638044-64638063 None:intergenic 30.0%
!! AATGGGTGAAGATTTGTTTT+GGG + chr4_2:64638345-64638364 Msa0615200:CDS 30.0%
!!! GTTTTGGAGTCATAATTTCA+TGG + chr4_2:64638392-64638411 Msa0615200:CDS 30.0%
! CCTTTGAAAGACAATATTGA+TGG - chr4_2:64638545-64638564 None:intergenic 30.0%
CCATCAATATTGTCTTTCAA+AGG + chr4_2:64638542-64638561 Msa0615200:CDS 30.0%
! TGAAATGAGTTGGATTGAAT+CGG + chr4_2:64638699-64638718 Msa0615200:CDS 30.0%
!!! TACCTTTTTCAATTTCCGAA+AGG + chr4_2:64638727-64638746 Msa0615200:CDS 30.0%
AAAACTCCTATTCCTGAAAA+TGG + chr4_2:64638832-64638851 Msa0615200:CDS 30.0%
!! TCTAATCCATTTTCAGGAAT+AGG - chr4_2:64638841-64638860 None:intergenic 30.0%
!! ATTCCTGAAAATGGATTAGA+AGG + chr4_2:64638841-64638860 Msa0615200:CDS 30.0%
! ATTCCTTCTAATCCATTTTC+AGG - chr4_2:64638847-64638866 None:intergenic 30.0%
ATGATGATATGGTTTCCTTA+TGG + chr4_2:64638904-64638923 Msa0615200:CDS 30.0%
ATTCCATTTCCTCATAGAAA+AGG + chr4_2:64638958-64638977 Msa0615200:intron 30.0%
! TTTCCTTTTCTATGAGGAAA+TGG - chr4_2:64638964-64638983 None:intergenic 30.0%
! AATCAACCTGGTAATGAATA+TGG - chr4_2:64638993-64639012 None:intergenic 30.0%
!! ATATTCATTACCAGGTTGAT+TGG + chr4_2:64638992-64639011 Msa0615200:intron 30.0%
TGGAAAAACTGCACATTAAT+TGG + chr4_2:64639034-64639053 Msa0615200:CDS 30.0%
TTTCAAAGTCTCCAAGAATT+GGG + chr4_2:64639091-64639110 Msa0615200:CDS 30.0%
! TAGTTGATATACCCAATTCT+TGG - chr4_2:64639105-64639124 None:intergenic 30.0%
AACTATAGAGACCTTGATAT+TGG + chr4_2:64639120-64639139 Msa0615200:intron 30.0%
TGTTATTCACACCAATATCA+AGG - chr4_2:64639134-64639153 None:intergenic 30.0%
ATTGGTGTGAATAACATTGA+TGG + chr4_2:64639138-64639157 Msa0615200:CDS 30.0%
CAAGAACAACTTCAAAAGAT+TGG + chr4_2:64639206-64639225 Msa0615200:CDS 30.0%
AAAGTTTAGAGGATCAACTT+TGG - chr4_2:64639244-64639263 None:intergenic 30.0%
TAACATATTACATGCCAACA+AGG + chr4_2:64639481-64639500 Msa0615200:intron 30.0%
!!! CAAGATTTCCACATCTTTTT+TGG + chr4_2:64639521-64639540 Msa0615200:intron 30.0%
ATACTCATCCAAAAAAGATG+TGG - chr4_2:64639532-64639551 None:intergenic 30.0%
AAGGGTTAACTAGGAATATA+GGG - chr4_2:64639734-64639753 None:intergenic 30.0%
AAAGGGTTAACTAGGAATAT+AGG - chr4_2:64639735-64639754 None:intergenic 30.0%
GTTGATTAAATGGTGTGAAA+GGG - chr4_2:64639752-64639771 None:intergenic 30.0%
! TGTTGATTAAATGGTGTGAA+AGG - chr4_2:64639753-64639772 None:intergenic 30.0%
!! TGGCCAATTTGTTGATTAAA+TGG - chr4_2:64639762-64639781 None:intergenic 30.0%
CAGTACATTTATCAGTTTCT+CGG + chr4_2:64639883-64639902 Msa0615200:intron 30.0%
! AATTCTAGGTTAGCATGTTT+TGG - chr4_2:64640142-64640161 None:intergenic 30.0%
!! GAAGTTTGTTACGTAAATTC+TGG + chr4_2:64640311-64640330 Msa0615200:intron 30.0%
TAATTCTAAGTAACACTCCA+TGG - chr4_2:64640441-64640460 None:intergenic 30.0%
!! TGGAGTGTTACTTAGAATTA+TGG + chr4_2:64640441-64640460 Msa0615200:intron 30.0%
!! GGAGTGTTACTTAGAATTAT+GGG + chr4_2:64640442-64640461 Msa0615200:intron 30.0%
! TGCTAATTCTAAAAAACTGC+GGG - chr4_2:64640592-64640611 None:intergenic 30.0%
AAACTGCTCTTATAACATGT+TGG + chr4_2:64640642-64640661 Msa0615200:intron 30.0%
!!! ATGTGCACAAATTTTAGAGT+GGG - chr4_2:64640977-64640996 None:intergenic 30.0%
!! AATGTGCACAAATTTTAGAG+TGG - chr4_2:64640978-64640997 None:intergenic 30.0%
CAATTGGAGAGAATATAACT+TGG - chr4_2:64641162-64641181 None:intergenic 30.0%
TGAAGTATGCAATTGACAAT+TGG - chr4_2:64641178-64641197 None:intergenic 30.0%
ATATTTCCTTGTCTCTGAAT+TGG + chr4_2:64641249-64641268 Msa0615200:intron 30.0%
! TCTAGGATAACTTATGCTAA+CGG + chr4_2:64641746-64641765 Msa0615200:intron 30.0%
TTGGTGCGAAGTTTATAAAA+AGG + chr4_2:64641953-64641972 Msa0615200:intron 30.0%
AATAACTATGGAGACATTGA+AGG - chr4_2:64642274-64642293 None:intergenic 30.0%
TATTGATGTGTAAGAGGAAT+TGG - chr4_2:64642339-64642358 None:intergenic 30.0%
!!! TGAGATTTTGAGTTGAGAAT+TGG - chr4_2:64642364-64642383 None:intergenic 30.0%
!! TGAATATGGGATATTTCTAG+AGG - chr4_2:64642431-64642450 None:intergenic 30.0%
GATTATGGTTGCTTGAATAT+GGG - chr4_2:64642444-64642463 None:intergenic 30.0%
AGATTATGGTTGCTTGAATA+TGG - chr4_2:64642445-64642464 None:intergenic 30.0%
ATGTACACAAAAAAACTGCA+TGG + chr4_2:64642591-64642610 Msa0615200:CDS 30.0%
TGTACACAAAAAAACTGCAT+GGG + chr4_2:64642592-64642611 Msa0615200:CDS 30.0%
!!! AACCTAGAGTTTTGCTTTTT+TGG - chr4_2:64642661-64642680 None:intergenic 30.0%
GTAAACACAGTAACAATTGA+TGG - chr4_2:64642926-64642945 None:intergenic 30.0%
GTTTACTGTTCCAAAAACAT+TGG + chr4_2:64642940-64642959 Msa0615200:CDS 30.0%
! GCATTTTGTTCCAATGTTTT+TGG - chr4_2:64642953-64642972 None:intergenic 30.0%
GCTTGAAATAAAACTAGTAC+TGG - chr4_2:64643094-64643113 None:intergenic 30.0%
!! TGAGTAAGAGGAATTGGTTT+TGG - chr4_2:64637846-64637865 None:intergenic 35.0%
ACGAGATCAATGACAACAAA+TGG - chr4_2:64638061-64638080 None:intergenic 35.0%
CATTGATCTCGTAAACTTCA+AGG + chr4_2:64638069-64638088 Msa0615200:intron 35.0%
ATGTAGAAAGCAAAACTGCT+TGG + chr4_2:64638104-64638123 Msa0615200:CDS 35.0%
TGTAGAAAGCAAAACTGCTT+GGG + chr4_2:64638105-64638124 Msa0615200:CDS 35.0%
AAGACCATATTTACGAACCA+AGG - chr4_2:64638260-64638279 None:intergenic 35.0%
TGCTCACATAATTGATGTGA+AGG + chr4_2:64638300-64638319 Msa0615200:CDS 35.0%
GCTCACATAATTGATGTGAA+GGG + chr4_2:64638301-64638320 Msa0615200:CDS 35.0%
ACATAATTGATGTGAAGGGT+AGG + chr4_2:64638305-64638324 Msa0615200:CDS 35.0%
TTTCTTGACAGACAAGCAAT+GGG + chr4_2:64638328-64638347 Msa0615200:intron 35.0%
!! CAATGGGTGAAGATTTGTTT+TGG + chr4_2:64638344-64638363 Msa0615200:CDS 35.0%
!!! GATTTGTTTTGGGCTATTAG+AGG + chr4_2:64638355-64638374 Msa0615200:CDS 35.0%
! GTTTACTGTTGCAAAAGCAT+TGG + chr4_2:64638453-64638472 Msa0615200:CDS 35.0%
! TTTCAATCCTTGTTTCTTGG+AGG + chr4_2:64638607-64638626 Msa0615200:intron 35.0%
AGATAAACTCATTCCCTTGA+TGG + chr4_2:64638633-64638652 Msa0615200:intron 35.0%
! GGAAACTTTTGTTCCATCAA+GGG - chr4_2:64638649-64638668 None:intergenic 35.0%
! AGGAAACTTTTGTTCCATCA+AGG - chr4_2:64638650-64638669 None:intergenic 35.0%
GAACAAAAGTTTCCTGAGTT+GGG + chr4_2:64638655-64638674 Msa0615200:CDS 35.0%
! TGGTCTTTGTTTCATGAAGA+TGG + chr4_2:64638868-64638887 Msa0615200:intron 35.0%
ATGATATGGTTTCCTTATGG+TGG + chr4_2:64638907-64638926 Msa0615200:CDS 35.0%
! GTTTCCTTATGGTGGAATAA+TGG + chr4_2:64638915-64638934 Msa0615200:CDS 35.0%
GTATCCATTATTCCACCATA+AGG - chr4_2:64638922-64638941 None:intergenic 35.0%
!! CTTGGAGACTTTGAAACAAA+AGG - chr4_2:64639087-64639106 None:intergenic 35.0%
GTTTCAAAGTCTCCAAGAAT+TGG + chr4_2:64639090-64639109 Msa0615200:CDS 35.0%
CTACAAGCAAGCTAGTATTT+GGG + chr4_2:64639170-64639189 Msa0615200:CDS 35.0%
TACAAGCAAGCTAGTATTTG+GGG + chr4_2:64639171-64639190 Msa0615200:CDS 35.0%
TAAATAAAGGTTTAGGGGAG+TGG + chr4_2:64639401-64639420 Msa0615200:intron 35.0%
AAATAAAGGTTTAGGGGAGT+GGG + chr4_2:64639402-64639421 Msa0615200:intron 35.0%
AGGGTTAACTAGGAATATAG+GGG - chr4_2:64639733-64639752 None:intergenic 35.0%
AAAGAACGCCTATAATTAGC+CGG + chr4_2:64639781-64639800 Msa0615200:intron 35.0%
! AACTGTTACCGGCTAATTAT+AGG - chr4_2:64639792-64639811 None:intergenic 35.0%
AAAGTTGTAGCAACTGTTAC+CGG - chr4_2:64639803-64639822 None:intergenic 35.0%
TCACAATCAGAAGATGTTGA+GGG - chr4_2:64639940-64639959 None:intergenic 35.0%
TTCACAATCAGAAGATGTTG+AGG - chr4_2:64639941-64639960 None:intergenic 35.0%
AGTTGATTGTTTGTAAGGCA+AGG - chr4_2:64639997-64640016 None:intergenic 35.0%
CATAGGAGTAGATGATAAGA+GGG - chr4_2:64640047-64640066 None:intergenic 35.0%
GATGCAAATGGTGCTTAAAT+TGG - chr4_2:64640106-64640125 None:intergenic 35.0%
ATATTGATATGAACGCATCC+TGG + chr4_2:64640181-64640200 Msa0615200:intron 35.0%
! CTTCTTCGTTGGTTGAAATA+AGG + chr4_2:64640243-64640262 Msa0615200:intron 35.0%
! ATTCTGTCCAAGTACACTTT+TGG + chr4_2:64640353-64640372 Msa0615200:intron 35.0%
! AATCTCACCAAAAGTGTACT+TGG - chr4_2:64640363-64640382 None:intergenic 35.0%
TAACACAATCACACGATTAC+TGG + chr4_2:64640872-64640891 Msa0615200:intron 35.0%
AACACAATCACACGATTACT+GGG + chr4_2:64640873-64640892 Msa0615200:intron 35.0%
TAAAAACTTGAGGGGTTATG+AGG - chr4_2:64641016-64641035 None:intergenic 35.0%
CCTAGGATAACTTATGCTAA+CGG + chr4_2:64641719-64641738 Msa0615200:intron 35.0%
CTTATGCTAACGGTTTATCT+AGG + chr4_2:64641729-64641748 Msa0615200:intron 35.0%
TGTAGAGAGTAAATCTACAG+CGG - chr4_2:64641902-64641921 None:intergenic 35.0%
TCTATAAACTTAGCGCTTGT+AGG - chr4_2:64642031-64642050 None:intergenic 35.0%
!!! GGCATCATTTTTTGTTAGTC+TGG - chr4_2:64642158-64642177 None:intergenic 35.0%
ATAGACAAATATGAGCTTCG+AGG - chr4_2:64642179-64642198 None:intergenic 35.0%
TCATTTACCTCTTCAGCAAT+TGG + chr4_2:64642221-64642240 Msa0615200:intron 35.0%
!! TTGGAGTATTGATGTGTAAG+AGG - chr4_2:64642345-64642364 None:intergenic 35.0%
! GTGACAATTACAAGAGGTTT+TGG - chr4_2:64642407-64642426 None:intergenic 35.0%
! ATGGTATTGGGAACAGATTA+TGG - chr4_2:64642459-64642478 None:intergenic 35.0%
ATAATCTGTTCCCAATACCA+TGG + chr4_2:64642458-64642477 Msa0615200:CDS 35.0%
ATGAGATCAATGACGACAAA+TGG - chr4_2:64642548-64642567 None:intergenic 35.0%
AGCCAAAAAAGCAAAACTCT+AGG + chr4_2:64642656-64642675 Msa0615200:CDS 35.0%
AAGACCATATTTACGCAACA+AGG - chr4_2:64642747-64642766 None:intergenic 35.0%
GTGAGCATCAATGATGTTAT+CGG - chr4_2:64642774-64642793 None:intergenic 35.0%
TGCTCACATAATTGATGTGA+AGG + chr4_2:64638300-64638319 Msa0615200:CDS 35.0%
GCTCACATAATTGATGTGAA+GGG + chr4_2:64638301-64638320 Msa0615200:CDS 35.0%
ACATAATTGATGTGAAGGGT+AGG + chr4_2:64638305-64638324 Msa0615200:CDS 35.0%
TTTCTTGACAGAGAAGCAAT+GGG + chr4_2:64642815-64642834 Msa0615200:CDS 35.0%
!! AATGGGTGAGGATTTGTTTT+GGG + chr4_2:64642832-64642851 Msa0615200:CDS 35.0%
!!! AGGATTTGTTTTGGGCTATT+AGG + chr4_2:64642840-64642859 Msa0615200:CDS 35.0%
!!! GGATTTGTTTTGGGCTATTA+GGG + chr4_2:64642841-64642860 Msa0615200:CDS 35.0%
!!! GATTTGTTTTGGGCTATTAG+GGG + chr4_2:64638355-64638374 Msa0615200:CDS 35.0%
!!! GTTTTGGTGTCATAGTTTCA+TGG + chr4_2:64642879-64642898 Msa0615200:CDS 35.0%
! TGTTCACAAGTGGCAATTTT+TGG + chr4_2:64642982-64643001 Msa0615200:CDS 35.0%
AGATGAATATTGTCTGGCAA+AGG + chr4_2:64643029-64643048 Msa0615200:CDS 35.0%
GATGAATATTGTCTGGCAAA+GGG + chr4_2:64643030-64643049 Msa0615200:CDS 35.0%
!! TTTCAAGCTTTGTTTCTTGG+AGG + chr4_2:64643106-64643125 Msa0615200:CDS 35.0%
TGTAGATAAACTCATACCCT+TGG + chr4_2:64643129-64643148 Msa0615200:CDS 35.0%
TACTGGTGAGTAAGAGGAAT+TGG - chr4_2:64637852-64637871 None:intergenic 40.0%
!! TTTGAGTACTGGTGAGTAAG+AGG - chr4_2:64637858-64637877 None:intergenic 40.0%
! AAGTGGTTTAGGTGTTGTGT+AGG - chr4_2:64637909-64637928 None:intergenic 40.0%
! GTGATGATGACAAGTGGTTT+AGG - chr4_2:64637920-64637939 None:intergenic 40.0%
! TGAATATGGGAAGGTTCTAG+AGG - chr4_2:64637944-64637963 None:intergenic 40.0%
ATGGCTGTTTGAATATGGGA+AGG - chr4_2:64637953-64637972 None:intergenic 40.0%
! AATCTGGAGGCCATGATTTT+GGG - chr4_2:64637984-64638003 None:intergenic 40.0%
AGCCAAAAAAGCCGAAATCT+CGG + chr4_2:64638169-64638188 Msa0615200:CDS 40.0%
!!! AACCGAGATTTCGGCTTTTT+TGG - chr4_2:64638174-64638193 None:intergenic 40.0%
! GGAACCTTGGTTCGTAAATA+TGG + chr4_2:64638253-64638272 Msa0615200:CDS 40.0%
GTTTCTTGACAGACAAGCAA+TGG + chr4_2:64638327-64638346 Msa0615200:intron 40.0%
!!! TTGTTTTGGGCTATTAGAGG+TGG + chr4_2:64638358-64638377 Msa0615200:CDS 40.0%
TCAAGTTCCATCAACTGTGA+CGG + chr4_2:64638429-64638448 Msa0615200:CDS 40.0%
! CTACAAAGCTTGTTCACAAG+TGG + chr4_2:64638485-64638504 Msa0615200:CDS 40.0%
ATCTACACCTCCAAGAAACA+AGG - chr4_2:64638617-64638636 None:intergenic 40.0%
GGAACAAAAGTTTCCTGAGT+TGG + chr4_2:64638654-64638673 Msa0615200:CDS 40.0%
CGCCTTTCGGAAATTGAAAA+AGG - chr4_2:64638732-64638751 None:intergenic 40.0%
GTTCTGTTAAGCAACACTTC+AGG - chr4_2:64638760-64638779 None:intergenic 40.0%
!! AGTGTTGCTTAACAGAACAC+TGG + chr4_2:64638762-64638781 Msa0615200:CDS 40.0%
! TTTCATGAAGATGGTGCCAA+AGG + chr4_2:64638877-64638896 Msa0615200:intron 40.0%
CCATATCATCATTGCACCTT+TGG - chr4_2:64638896-64638915 None:intergenic 40.0%
! CCAAAGGTGCAATGATGATA+TGG + chr4_2:64638893-64638912 Msa0615200:CDS 40.0%
GCTACAAGCAAGCTAGTATT+TGG + chr4_2:64639169-64639188 Msa0615200:CDS 40.0%
AATAAAGGTTTAGGGGAGTG+GGG + chr4_2:64639403-64639422 Msa0615200:intron 40.0%
CCAACAAGGTCTTCTTCAAT+CGG + chr4_2:64639495-64639514 Msa0615200:intron 40.0%
CAACAAGGTCTTCTTCAATC+GGG + chr4_2:64639496-64639515 Msa0615200:intron 40.0%
ATGGTGTGAAAGGGTTAACT+AGG - chr4_2:64639743-64639762 None:intergenic 40.0%
GGCTAATTATAGGCGTTCTT+TGG - chr4_2:64639782-64639801 None:intergenic 40.0%
GCATAGGAGTAGATGATAAG+AGG - chr4_2:64640048-64640067 None:intergenic 40.0%
CTTATCATCTACTCCTATGC+TGG + chr4_2:64640048-64640067 Msa0615200:intron 40.0%
TGTATAACTCTGACCAGCAT+AGG - chr4_2:64640064-64640083 None:intergenic 40.0%
GCAAATGGTGCTTAAATTGG+AGG - chr4_2:64640103-64640122 None:intergenic 40.0%
!!! ATGTTTTGGAGGGGTGTTAA+TGG - chr4_2:64640128-64640147 None:intergenic 40.0%
!!! TAGGTTAGCATGTTTTGGAG+GGG - chr4_2:64640137-64640156 None:intergenic 40.0%
!! CTAGGTTAGCATGTTTTGGA+GGG - chr4_2:64640138-64640157 None:intergenic 40.0%
!! TCTAGGTTAGCATGTTTTGG+AGG - chr4_2:64640139-64640158 None:intergenic 40.0%
! GTGCTGCTCATCAAAATTCT+AGG - chr4_2:64640156-64640175 None:intergenic 40.0%
AGACGTGTATGAGTATCAAG+TGG - chr4_2:64640219-64640238 None:intergenic 40.0%
GAAATAAGGCAGCATCGTTA+TGG + chr4_2:64640257-64640276 Msa0615200:intron 40.0%
!!! TGGCTTTTTAAAACCTGCCA+TGG + chr4_2:64640421-64640440 Msa0615200:intron 40.0%
TGCTCTTATAACATGTTGGC+TGG + chr4_2:64640646-64640665 Msa0615200:intron 40.0%
! GCTCTTATAACATGTTGGCT+GGG + chr4_2:64640647-64640666 Msa0615200:intron 40.0%
ATGGTTGAACAACATGAAGG+TGG - chr4_2:64640674-64640693 None:intergenic 40.0%
!! TCTGTTTTGCAGCCTTATGT+AGG - chr4_2:64640822-64640841 None:intergenic 40.0%
TAAGGCTGCAAAACAGAGAA+AGG + chr4_2:64640825-64640844 Msa0615200:intron 40.0%
AAGGCTGCAAAACAGAGAAA+GGG + chr4_2:64640826-64640845 Msa0615200:intron 40.0%
!! AAGAGTACCTAGATTGCTCT+GGG - chr4_2:64640853-64640872 None:intergenic 40.0%
!! TAAGAGTACCTAGATTGCTC+TGG - chr4_2:64640854-64640873 None:intergenic 40.0%
CTGGGATTATATGTCCGAAA+AGG + chr4_2:64640891-64640910 Msa0615200:intron 40.0%
! GTTTAAGTTTCCACGTAAGG+AGG - chr4_2:64640936-64640955 None:intergenic 40.0%
! ACGGTTTAAGTTTCCACGTA+AGG - chr4_2:64640939-64640958 None:intergenic 40.0%
! TGGGTGACTCCTTTTATAGA+CGG - chr4_2:64640958-64640977 None:intergenic 40.0%
AGAAAAATCCCATACCATGC+CGG + chr4_2:64641463-64641482 Msa0615200:intron 40.0%
CCGTTAGCATAAGTTATCCT+AGG - chr4_2:64641722-64641741 None:intergenic 40.0%
AGTCTAAACTCTAGCACAAG+TGG + chr4_2:64641930-64641949 Msa0615200:intron 40.0%
TAAACTCTAGCACAAGTGGT+TGG + chr4_2:64641934-64641953 Msa0615200:intron 40.0%
AGTAGTACCAATTGCTGAAG+AGG - chr4_2:64642231-64642250 None:intergenic 40.0%
! TGTGTAAGAGGAATTGGCTT+TGG - chr4_2:64642333-64642352 None:intergenic 40.0%
!!! AAGAGGTTTTGGTGTTGTGT+TGG - chr4_2:64642396-64642415 None:intergenic 40.0%
! AGAGGTGTGACAATTACAAG+AGG - chr4_2:64642413-64642432 None:intergenic 40.0%
AATCTGTAGGCCATGGTATT+GGG - chr4_2:64642471-64642490 None:intergenic 40.0%
CTACAGATTCGAATTCGAAG+CGG + chr4_2:64642482-64642501 Msa0615200:CDS 40.0%
AAAACTGCATGGGTTCAATC+TGG + chr4_2:64642602-64642621 Msa0615200:CDS 40.0%
GGAACCTTGTTGCGTAAATA+TGG + chr4_2:64642740-64642759 Msa0615200:CDS 40.0%
GTTTCTTGACAGAGAAGCAA+TGG + chr4_2:64642814-64642833 Msa0615200:CDS 40.0%
!! CAATGGGTGAGGATTTGTTT+TGG + chr4_2:64642831-64642850 Msa0615200:CDS 40.0%
! CAACAAAGCTTGTTCACAAG+TGG + chr4_2:64642972-64642991 Msa0615200:CDS 40.0%
GGAAACTTCTCTTGAACCAA+GGG - chr4_2:64643148-64643167 None:intergenic 40.0%
AGGAAACTTCTCTTGAACCA+AGG - chr4_2:64643149-64643168 None:intergenic 40.0%
TCTGTTAAGCAACACTTCAG+TGG - chr4_2:64638758-64638777 None:intergenic 40.0%
! AGAGGTGTGATGATGACAAG+TGG - chr4_2:64637926-64637945 None:intergenic 45.0%
! GAATCTGGAGGCCATGATTT+TGG - chr4_2:64637985-64638004 None:intergenic 45.0%
AGGATAGACCCTCAAAGTCA+TGG - chr4_2:64638024-64638043 None:intergenic 45.0%
AAAACTGCTTGGGTTCAGTC+TGG + chr4_2:64638115-64638134 Msa0615200:CDS 45.0%
GCTTGTCCTACAATAGGTGT+TGG + chr4_2:64638205-64638224 Msa0615200:CDS 45.0%
!! TGTCCTACAATAGGTGTTGG+TGG + chr4_2:64638208-64638227 Msa0615200:CDS 45.0%
TGTCCACCAACACCTATTGT+AGG - chr4_2:64638214-64638233 None:intergenic 45.0%
! TTTTGGGCTATTAGAGGTGG+TGG + chr4_2:64638361-64638380 Msa0615200:CDS 45.0%
GTAAACACCGTCACAGTTGA+TGG - chr4_2:64638439-64638458 None:intergenic 45.0%
TGTTCACAAGTGGCAGTATG+TGG + chr4_2:64638495-64638514 Msa0615200:CDS 45.0%
! AAAGTTTCCTGAGTTGGGTG+TGG + chr4_2:64638660-64638679 Msa0615200:CDS 45.0%
!! TTACCAGGTTGATTGGCAAC+AGG + chr4_2:64638999-64639018 Msa0615200:intron 45.0%
TATACCTTCTCTTGTGCCCA+AGG + chr4_2:64639281-64639300 Msa0615200:intron 45.0%
ATACCTTCTCTTGTGCCCAA+GGG + chr4_2:64639282-64639301 Msa0615200:intron 45.0%
CCGATTGAAGAAGACCTTGT+TGG - chr4_2:64639498-64639517 None:intergenic 45.0%
! GATTTTGCTGCGAAAACTGC+TGG + chr4_2:64639701-64639720 Msa0615200:intron 45.0%
GAAGATGTTGAGGGAGGATT+AGG - chr4_2:64639931-64639950 None:intergenic 45.0%
CAATCAGAAGATGTTGAGGG+AGG - chr4_2:64639937-64639956 None:intergenic 45.0%
GTAAGTGTGACTAATGAGCG+AGG - chr4_2:64639972-64639991 None:intergenic 45.0%
! GGGGTGTTAATGGATGCAAA+TGG - chr4_2:64640118-64640137 None:intergenic 45.0%
CACGTCTTCATCTTCTTCGT+TGG + chr4_2:64640232-64640251 Msa0615200:intron 45.0%
TCTAAGTAACACTCCATGGC+AGG - chr4_2:64640437-64640456 None:intergenic 45.0%
GCGATGGTTGAACAACATGA+AGG - chr4_2:64640677-64640696 None:intergenic 45.0%
AACTGTTCCAGACTGGATCA+AGG + chr4_2:64640737-64640756 Msa0615200:intron 45.0%
AGGAGTAGGCGATCCATATT+TGG - chr4_2:64640802-64640821 None:intergenic 45.0%
! TTGCAGCCTTATGTAGGAGT+AGG - chr4_2:64640816-64640835 None:intergenic 45.0%
TAAGTTTCCACGTAAGGAGG+AGG - chr4_2:64640933-64640952 None:intergenic 45.0%
CATGGTCCAATTCAGAGACA+AGG - chr4_2:64641258-64641277 None:intergenic 45.0%
GCTAGAGTTTAGACTCTCGT+GGG - chr4_2:64641925-64641944 None:intergenic 45.0%
TGCTAGAGTTTAGACTCTCG+TGG - chr4_2:64641926-64641945 None:intergenic 45.0%
GAATCTGTAGGCCATGGTAT+TGG - chr4_2:64642472-64642491 None:intergenic 45.0%
GAATTCGAATCTGTAGGCCA+TGG - chr4_2:64642478-64642497 None:intergenic 45.0%
CGCTTCGAATTCGAATCTGT+AGG - chr4_2:64642484-64642503 None:intergenic 45.0%
GTTCAATCTGGTGCAACACT+TGG + chr4_2:64642614-64642633 Msa0615200:CDS 45.0%
GCAAGTGTTTGTCCTACTGT+AGG + chr4_2:64642686-64642705 Msa0615200:CDS 45.0%
GTTTGTCCTACTGTAGGTGT+TGG + chr4_2:64642692-64642711 Msa0615200:CDS 45.0%
!!! TTGTTTTGGGCTATTAGGGG+TGG + chr4_2:64642845-64642864 Msa0615200:CDS 45.0%
CAAGAGAAGTTTCCTGAGCT+TGG + chr4_2:64643154-64643173 Msa0615200:CDS 45.0%
GAAGTTTCCTGAGCTTGGTT+TGG + chr4_2:64643159-64643178 Msa0615200:CDS 45.0%
TCTCTAACCAAACCAAGCTC+AGG - chr4_2:64643169-64643188 None:intergenic 45.0%
! CACTTCAGTGGAGAACCTTT+TGG - chr4_2:64643244-64643263 None:intergenic 45.0%
TCCAGATTCGAACCCGTAGT+GGG + chr4_2:64637996-64638015 Msa0615200:CDS 50.0%
GTTCAGTCTGGTGCAACACT+TGG + chr4_2:64638127-64638146 Msa0615200:CDS 50.0%
CAGCTGGGAAACCGAGATTT+CGG - chr4_2:64638183-64638202 None:intergenic 50.0%
TTGTAGGACAAGCACCAGCT+GGG - chr4_2:64638198-64638217 None:intergenic 50.0%
ATTGTAGGACAAGCACCAGC+TGG - chr4_2:64638199-64638218 None:intergenic 50.0%
GCTGGTGCTTGTCCTACAAT+AGG + chr4_2:64638199-64638218 Msa0615200:CDS 50.0%
TCTCTAACCACACCCAACTC+AGG - chr4_2:64638670-64638689 None:intergenic 50.0%
ACTTCAGGCAATGCGCCTTT+CGG - chr4_2:64638745-64638764 None:intergenic 50.0%
CTTCCTGTTGCCAATCAACC+TGG - chr4_2:64639005-64639024 None:intergenic 50.0%
!! CAGGTTGATTGGCAACAGGA+AGG + chr4_2:64639003-64639022 Msa0615200:intron 50.0%
TTGGCAACAGGAAGGTGATG+AGG + chr4_2:64639011-64639030 Msa0615200:CDS 50.0%
! GGTCTAGAGCTAAGGGGTAA+TGG + chr4_2:64639424-64639443 Msa0615200:intron 50.0%
! GCTAAGGGGTAATGGCTTCA+AGG + chr4_2:64639432-64639451 Msa0615200:intron 50.0%
GATGTTGAGGGAGGATTAGG+AGG - chr4_2:64639928-64639947 None:intergenic 50.0%
ATATGAACGCATCCTGGCAG+AGG + chr4_2:64640187-64640206 Msa0615200:intron 50.0%
TGGTCTCATAGCTGGAAACG+TGG - chr4_2:64640704-64640723 None:intergenic 50.0%
! CTATGAGACCACGACTTGGA+AGG + chr4_2:64640713-64640732 Msa0615200:intron 50.0%
AACAGTTGCCTTCCAAGTCG+TGG - chr4_2:64640724-64640743 None:intergenic 50.0%
TTATTGGGCCTTCGCGCTTT+AGG - chr4_2:64640769-64640788 None:intergenic 50.0%
GGATCGCCTACTCCTACATA+AGG + chr4_2:64640807-64640826 Msa0615200:intron 50.0%
AAAGGGACCCAGAGCAATCT+AGG + chr4_2:64640843-64640862 Msa0615200:intron 50.0%
GTAAGGAGGAGGTTGTTAGG+CGG - chr4_2:64640922-64640941 None:intergenic 50.0%
CACGTAAGGAGGAGGTTGTT+AGG - chr4_2:64640925-64640944 None:intergenic 50.0%
CTAACAACCTCCTCCTTACG+TGG + chr4_2:64640923-64640942 Msa0615200:intron 50.0%
GTAAGGACGACGACCAAAGT+AGG - chr4_2:64641084-64641103 None:intergenic 50.0%
CAGATTCGAATTCGAAGCGG+CGG + chr4_2:64642485-64642504 Msa0615200:CDS 50.0%
AAGACAGACCCTCAAAGTCG+TGG - chr4_2:64642511-64642530 None:intergenic 50.0%
!! TGTCCTACTGTAGGTGTTGG+TGG + chr4_2:64642695-64642714 Msa0615200:CDS 50.0%
TGTCCACCAACACCTACAGT+AGG - chr4_2:64642701-64642720 None:intergenic 50.0%
!! CACTTCAGTGGTGGTGGATA+TGG + chr4_2:64642719-64642738 Msa0615200:CDS 50.0%
TGACAGAGAAGCAATGGGTG+AGG + chr4_2:64642820-64642839 Msa0615200:CDS 50.0%
! TTTTGGGCTATTAGGGGTGG+TGG + chr4_2:64642848-64642867 Msa0615200:CDS 50.0%
CACTACGGGTTCGAATCTGG+AGG - chr4_2:64637997-64638016 None:intergenic 55.0%
CTCCAGATTCGAACCCGTAG+TGG + chr4_2:64637995-64638014 Msa0615200:CDS 55.0%
CCAGATTCGAACCCGTAGTG+GGG + chr4_2:64637997-64638016 Msa0615200:CDS 55.0%
CAGATTCGAACCCGTAGTGG+GGG + chr4_2:64637998-64638017 Msa0615200:CDS 55.0%
AAAGTCATGGCCCCCACTAC+GGG - chr4_2:64638011-64638030 None:intergenic 55.0%
CAAAGTCATGGCCCCCACTA+CGG - chr4_2:64638012-64638031 None:intergenic 55.0%
TAGTGGGGGCCATGACTTTG+AGG + chr4_2:64638012-64638031 Msa0615200:CDS 55.0%
AGTGGGGGCCATGACTTTGA+GGG + chr4_2:64638013-64638032 Msa0615200:CDS 55.0%
CGAAATCTCGGTTTCCCAGC+TGG + chr4_2:64638181-64638200 Msa0615200:CDS 55.0%
!! GGTGTTGGTGGACACTTCAG+TGG + chr4_2:64638220-64638239 Msa0615200:CDS 55.0%
! GTTGGTGGACACTTCAGTGG+TGG + chr4_2:64638223-64638242 Msa0615200:CDS 55.0%
!! CACTTCAGTGGTGGTGGCTA+TGG + chr4_2:64638232-64638251 Msa0615200:CDS 55.0%
!! TGGTGGTGGCTATGGAACCT+TGG + chr4_2:64638240-64638259 Msa0615200:CDS 55.0%
! TGGGCTATTAGAGGTGGTGG+AGG + chr4_2:64638364-64638383 Msa0615200:CDS 55.0%
!!! GGTGGTGGAGGAGCAAGTTT+TGG + chr4_2:64638376-64638395 Msa0615200:CDS 55.0%
GCAACAGGAAGGTGATGAGG+TGG + chr4_2:64639014-64639033 Msa0615200:CDS 55.0%
TGTCCCTTGGGCACAAGAGA+AGG - chr4_2:64639288-64639307 None:intergenic 55.0%
! GGAGTGGGGTCTAGAGCTAA+GGG + chr4_2:64639417-64639436 Msa0615200:intron 55.0%
! GAGTGGGGTCTAGAGCTAAG+GGG + chr4_2:64639418-64639437 Msa0615200:intron 55.0%
CTGGAAACGTGGACTTGCGA+TGG - chr4_2:64640693-64640712 None:intergenic 55.0%
CCAAGTCGTGGTCTCATAGC+TGG - chr4_2:64640712-64640731 None:intergenic 55.0%
CCAGCTATGAGACCACGACT+TGG + chr4_2:64640709-64640728 Msa0615200:intron 55.0%
GGAAGGCAACTGTTCCAGAC+TGG + chr4_2:64640730-64640749 Msa0615200:intron 55.0%
GATTGGGCCTTGATCCAGTC+TGG - chr4_2:64640747-64640766 None:intergenic 55.0%
!! GGCCTTCGCGCTTTAGGATT+GGG - chr4_2:64640763-64640782 None:intergenic 55.0%
! GTTAGGCGGTTGCGCCTTTT+CGG - chr4_2:64640908-64640927 None:intergenic 55.0%
GGGATGCGGTTGTCTTTCAC+TGG - chr4_2:64641060-64641079 None:intergenic 55.0%
CAACCGCATCCCACCTACTT+TGG + chr4_2:64641068-64641087 Msa0615200:intron 55.0%
CGACCAAAGTAGGTGGGATG+CGG - chr4_2:64641074-64641093 None:intergenic 55.0%
GGACGACGACCAAAGTAGGT+GGG - chr4_2:64641080-64641099 None:intergenic 55.0%
AGGACGACGACCAAAGTAGG+TGG - chr4_2:64641081-64641100 None:intergenic 55.0%
CTGCTAAGCCGGCATGGTAT+GGG - chr4_2:64641474-64641493 None:intergenic 55.0%
!! CATACCATGCCGGCTTAGCA+GGG + chr4_2:64641473-64641492 Msa0615200:intron 55.0%
AACAGTCCTCCCTGCTAAGC+CGG - chr4_2:64641485-64641504 None:intergenic 55.0%
!! GGTGTTGGTGGACACTTCAG+TGG + chr4_2:64638220-64638239 Msa0615200:CDS 55.0%
! GTTGGTGGACACTTCAGTGG+TGG + chr4_2:64638223-64638242 Msa0615200:CDS 55.0%
!!! GGTGGTGGAGGAGCAAGTTT+TGG + chr4_2:64638376-64638395 Msa0615200:CDS 55.0%
CCCCACTACGGGTTCGAATC+TGG - chr4_2:64638000-64638019 None:intergenic 60.0%
GGTGGACACTTCAGTGGTGG+TGG + chr4_2:64638226-64638245 Msa0615200:CDS 60.0%
! GGGAGTGGGGTCTAGAGCTA+AGG + chr4_2:64639416-64639435 Msa0615200:intron 60.0%
AAGTGGAACCTGCCTCTGCC+AGG - chr4_2:64640202-64640221 None:intergenic 60.0%
GGCCCAATCCTAAAGCGCGA+AGG + chr4_2:64640758-64640777 Msa0615200:intron 60.0%
!! GGGCCTTCGCGCTTTAGGAT+TGG - chr4_2:64640764-64640783 None:intergenic 60.0%
CCTGCTAAGCCGGCATGGTA+TGG - chr4_2:64641475-64641494 None:intergenic 60.0%
!! CCATACCATGCCGGCTTAGC+AGG + chr4_2:64641472-64641491 Msa0615200:intron 60.0%
GGTGGACACTTCAGTGGTGG+TGG + chr4_2:64638226-64638245 Msa0615200:CDS 60.0%
! TGGGCTATTAGGGGTGGTGG+AGG + chr4_2:64642851-64642870 Msa0615200:CDS 60.0%
GAACGCATCCTGGCAGAGGC+AGG + chr4_2:64640191-64640210 Msa0615200:intron 65.0%
!! ACCATGCCGGCTTAGCAGGG+AGG + chr4_2:64641476-64641495 Msa0615200:intron 65.0%
TCCTCCCTGCTAAGCCGGCA+TGG - chr4_2:64641480-64641499 None:intergenic 65.0%
AAGCGGCGGCCACGACTTTG+AGG + chr4_2:64642499-64642518 Msa0615200:CDS 65.0%
AGCGGCGGCCACGACTTTGA+GGG + chr4_2:64642500-64642519 Msa0615200:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 64637686 64643321 64637686 ID=Msa0615200;Name=Msa0615200
chr4_2 mRNA 64637686 64643321 64637686 ID=Msa0615200-mRNA-1;Parent=Msa0615200;Name=Msa0615200-mRNA-1;_AED=0.43;_eAED=0.45;_QI=0|0|0|1|0|0|9|0|829
chr4_2 exon 64637686 64637800 64637686 ID=Msa0615200-mRNA-1:exon:18198;Parent=Msa0615200-mRNA-1
chr4_2 exon 64637834 64638078 64637834 ID=Msa0615200-mRNA-1:exon:18199;Parent=Msa0615200-mRNA-1
chr4_2 exon 64638091 64638326 64638091 ID=Msa0615200-mRNA-1:exon:18200;Parent=Msa0615200-mRNA-1
chr4_2 exon 64638339 64638583 64638339 ID=Msa0615200-mRNA-1:exon:18201;Parent=Msa0615200-mRNA-1
chr4_2 exon 64638635 64638875 64638635 ID=Msa0615200-mRNA-1:exon:18202;Parent=Msa0615200-mRNA-1
chr4_2 exon 64638887 64638950 64638887 ID=Msa0615200-mRNA-1:exon:18203;Parent=Msa0615200-mRNA-1
chr4_2 exon 64639006 64639112 64639006 ID=Msa0615200-mRNA-1:exon:18204;Parent=Msa0615200-mRNA-1
chr4_2 exon 64639128 64639279 64639128 ID=Msa0615200-mRNA-1:exon:18205;Parent=Msa0615200-mRNA-1
chr4_2 exon 64642237 64643321 64642237 ID=Msa0615200-mRNA-1:exon:18206;Parent=Msa0615200-mRNA-1
chr4_2 CDS 64637686 64637800 64637686 ID=Msa0615200-mRNA-1:cds;Parent=Msa0615200-mRNA-1
chr4_2 CDS 64637834 64638078 64637834 ID=Msa0615200-mRNA-1:cds;Parent=Msa0615200-mRNA-1
chr4_2 CDS 64638091 64638326 64638091 ID=Msa0615200-mRNA-1:cds;Parent=Msa0615200-mRNA-1
chr4_2 CDS 64638339 64638583 64638339 ID=Msa0615200-mRNA-1:cds;Parent=Msa0615200-mRNA-1
chr4_2 CDS 64638635 64638875 64638635 ID=Msa0615200-mRNA-1:cds;Parent=Msa0615200-mRNA-1
chr4_2 CDS 64638887 64638950 64638887 ID=Msa0615200-mRNA-1:cds;Parent=Msa0615200-mRNA-1
chr4_2 CDS 64639006 64639112 64639006 ID=Msa0615200-mRNA-1:cds;Parent=Msa0615200-mRNA-1
chr4_2 CDS 64639128 64639279 64639128 ID=Msa0615200-mRNA-1:cds;Parent=Msa0615200-mRNA-1
chr4_2 CDS 64642237 64643321 64642237 ID=Msa0615200-mRNA-1:cds;Parent=Msa0615200-mRNA-1
Gene Sequence

>Msa0615200

ATGATGCCTCTAAGCTCATATTTGTCTATTGTACTTATTGCTATTTTATTTTCATATGCATCTTCTGCAATTGATACTAATACTAATGAAGATAACTTCCTTCAATGTCTTTCTATTGTGTACACCAAAACCAATTCCTCTTACTCACCAGTACTCAAATATACAACTCAAAATCTAAGATTTGCATCCTACACAACACCTAAACCACTTGTCATCATCACACCTCTAGAACCTTCCCATATTCAAACAGCCATAATTTGTTCCCAAAATCATGGCCTCCAGATTCGAACCCGTAGTGGGGGCCATGACTTTGAGGGTCTATCCTATGTTTCAGAAGTTCCATTTGTTGTCATTGATCTCGAAATTGATGTAGATGTAGAAAGCAAAACTGCTTGGGTTCAGTCTGGTGCAACACTTGGTGAACTTTACTACACAATTAGCCAAAAAAGCCGAAATCTCGGTTTCCCAGCTGGTGCTTGTCCTACAATAGGTGTTGGTGGACACTTCAGTGGTGGTGGCTATGGAACCTTGGTTCGTAAATATGGTCTTGCAGCCGATAATATAATTGATGCTCACATAATTGATGTGAAGGGTAGACAAGCAATGGGTGAAGATTTGTTTTGGGCTATTAGAGGTGGTGGAGGAGCAAGTTTTGGAGTCATAATTTCATGGAAGATTAAACTTGTTCAAGTTCCATCAACTGTGACGGTGTTTACTGTTGCAAAAGCATTGGAGCAAAATGCTACAAAGCTTGTTCACAAGTGGCAGTATGTGGCAAGTAAAATTGATGAAAACATAGCCATCAATATTGTCTTTCAAAGGATAAATTCAAGTAAAAAAGATAAACTCATTCCCTTGATGGAACAAAAGTTTCCTGAGTTGGGTGTGGTTAGAGAAAATTGTATTGAAATGAGTTGGATTGAATCGGTTCTTTACCTTTTTCAATTTCCGAAAGGCGCATTGCCTGAAGTGTTGCTTAACAGAACACTGGCTGCAAACAGCCCAAGATTTATTTACAAAGCAAAATCTGATTTTGTGAAAACTCCTATTCCTGAAAATGGATTAGAAGGAATATGGTCTTTATGGTGCCAAAGGTGCAATGATGATATGGTTTCCTTATGGTGGAATAATGGATACTATTTCAGAGTTGATTGGCAACAGGAAGGTGATGAGGTGGAAAAACTGCACATTAATTGGATTAGAAAAATTTATAATTACATGGAACCTTTTGTTTCAAAGTCTCCAAGAATTGGAGACCTTGATATTGGTGTGAATAACATTGATGGTTACACAAGCTACAAGCAAGCTAGTATTTGGGGTGTTAAGTACTTCAAGAACAACTTCAAAAGATTGGCAAAAGTGAAGACCAAAGTTGATCCTCTAAACTTTTTCAGAAATGAACAAACAATTGGTACTACTACTAATGAAGATAATAACTTCCTTCAATGTCTCCATAGTTATTCACATAACTCAACTTCAATCTCTGAAGTTGTGTACACCAAAGCCAATTCCTCTTACACATCAATACTCCAATTCTCAACTCAAAATCTCAGATTTGCAACCAACACAACACCAAAACCTCTTGTAATTGTCACACCTCTAGAAATATCCCATATTCAAGCAACCATAATCTGTTCCCAATACCATGGCCTACAGATTCGAATTCGAAGCGGCGGCCACGACTTTGAGGGTCTGTCTTATGTCTCTGAAGTTCCATTTGTCGTCATTGATCTCATAAACTTCAGAGAAATTGAAATAAATGTACACAAAAAAACTGCATGGGTTCAATCTGGTGCAACACTTGGTGAACTTTACTACGCAATTAGCCAAAAAAGCAAAACTCTAGGTTTCCCTGCAAGTGTTTGTCCTACTGTAGGTGTTGGTGGACACTTCAGTGGTGGTGGATATGGAACCTTGTTGCGTAAATATGGTCTTGCAGCCGATAACATCATTGATGCTCACATAATTGATGTGAAGGGTAGGTTTCTTGACAGAGAAGCAATGGGTGAGGATTTGTTTTGGGCTATTAGGGGTGGTGGAGGAGCAAGTTTTGGTGTCATAGTTTCATGGAAGATTAAACTTGTTCAAGTTCCATCAATTGTTACTGTGTTTACTGTTCCAAAAACATTGGAACAAAATGCAACAAAGCTTGTTCACAAGTGGCAATTTTTGGCAAGTAAACTTGATGAAAATATAGAGATGAATATTGTCTGGCAAAGGGTAAATTTAAATTCAAGTAAAAAAGGTGAGTCAAAGTCACCAGTACTAGTTTTATTTCAAGCTTTGTTTCTTGGAGGTGTAGATAAACTCATACCCTTGGTTCAAGAGAAGTTTCCTGAGCTTGGTTTGGTTAGAGAATATTGTATTGAAATGAGTTGGATTGAATCTGTTCTTTACTTTTTTCAGTTTCCAAAAGGTTCTCCACTGAAGTGTTGCTTAACAGAACACAAGCTACACTTGATATTTTCAAAGCAAAATCTGATTTTGTGA
Protein sequence

>Msa0615200

MMPLSSYLSIVLIAILFSYASSAIDTNTNEDNFLQCLSIVYTKTNSSYSPVLKYTTQNLRFASYTTPKPLVIITPLEPSHIQTAIICSQNHGLQIRTRSGGHDFEGLSYVSEVPFVVIDLEIDVDVESKTAWVQSGATLGELYYTISQKSRNLGFPAGACPTIGVGGHFSGGGYGTLVRKYGLAADNIIDAHIIDVKGRQAMGEDLFWAIRGGGGASFGVIISWKIKLVQVPSTVTVFTVAKALEQNATKLVHKWQYVASKIDENIAINIVFQRINSSKKDKLIPLMEQKFPELGVVRENCIEMSWIESVLYLFQFPKGALPEVLLNRTLAANSPRFIYKAKSDFVKTPIPENGLEGIWSLWCQRCNDDMVSLWWNNGYYFRVDWQQEGDEVEKLHINWIRKIYNYMEPFVSKSPRIGDLDIGVNNIDGYTSYKQASIWGVKYFKNNFKRLAKVKTKVDPLNFFRNEQTIGTTTNEDNNFLQCLHSYSHNSTSISEVVYTKANSSYTSILQFSTQNLRFATNTTPKPLVIVTPLEISHIQATIICSQYHGLQIRIRSGGHDFEGLSYVSEVPFVVIDLINFREIEINVHKKTAWVQSGATLGELYYAISQKSKTLGFPASVCPTVGVGGHFSGGGYGTLLRKYGLAADNIIDAHIIDVKGRFLDREAMGEDLFWAIRGGGGASFGVIVSWKIKLVQVPSIVTVFTVPKTLEQNATKLVHKWQFLASKLDENIEMNIVWQRVNLNSSKKGESKSPVLVLFQALFLGGVDKLIPLVQEKFPELGLVREYCIEMSWIESVLYFFQFPKGSPLKCCLTEHKLHLIFSKQNLIL*