Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197140 | XP_003594152.1 | 99.469 | 565 | 2 | 1 | 1 | 564 | 1 | 565 | 0.0 | 1161 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197140 | sp|Q41141|PFPB_RICCO | 86.157 | 549 | 75 | 1 | 13 | 561 | 2 | 549 | 0.0 | 974 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197140 | Q2HTG9 | 99.469 | 565 | 2 | 1 | 1 | 564 | 1 | 565 | 0.0 | 1161 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001800 | Msa0197140 | 0.815414 | 9.358951e-52 | -8.615850e-47 |
| Msa0173250 | Msa0197140 | 0.825883 | 3.677256e-54 | -8.615850e-47 |
| Msa0195230 | Msa0197140 | 0.800824 | 1.202121e-48 | -8.615850e-47 |
| Msa0195260 | Msa0197140 | 0.805142 | 1.539753e-49 | -8.615850e-47 |
| Msa0197140 | Msa0240540 | 0.834036 | 3.779821e-56 | -8.615850e-47 |
| Msa0197140 | Msa0276850 | 0.858928 | 5.880573e-63 | -8.615850e-47 |
| Msa0197140 | Msa0276860 | 0.848228 | 7.006398e-60 | -8.615850e-47 |
| Msa0197140 | Msa0326710 | 0.816723 | 4.774519e-52 | -8.615850e-47 |
| Msa0197140 | Msa0447870 | 0.801111 | 1.050380e-48 | -8.615850e-47 |
| Msa0197140 | Msa0523110 | 0.805216 | 1.485661e-49 | -8.615850e-47 |
| Msa0197140 | Msa0525880 | 0.805049 | 1.610555e-49 | -8.615850e-47 |
| Msa0197140 | Msa0574900 | 0.836204 | 1.073265e-56 | -8.615850e-47 |
| Msa0197140 | Msa0605530 | 0.811255 | 7.670467e-51 | -8.615850e-47 |
| Msa0197140 | Msa0630440 | 0.815925 | 7.199499e-52 | -8.615850e-47 |
| Msa0197140 | Msa0689830 | 0.812454 | 4.206126e-51 | -8.615850e-47 |
| Msa0197140 | Msa0758030 | 0.816033 | 6.810463e-52 | -8.615850e-47 |
| Msa0197140 | Msa0799450 | 0.814824 | 1.265210e-51 | -8.615850e-47 |
| Msa0197140 | Msa0930770 | 0.869319 | 3.385501e-66 | -8.615850e-47 |
| Msa0197140 | Msa1019200 | 0.826307 | 2.914795e-54 | -8.615850e-47 |
| Msa0197140 | Msa1104110 | 0.811059 | 8.461018e-51 | -8.615850e-47 |
| Msa0197140 | Msa1147700 | 0.835447 | 1.669315e-56 | -8.615850e-47 |
| Msa0197140 | Msa1402010 | 0.837243 | 5.831465e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197140 | MtrunA17_Chr2g0289271 | 99.469 | 565 | 2 | 1 | 1 | 564 | 1 | 565 | 0.0 | 1161 |
| Msa0197140 | MtrunA17_Chr4g0075371 | 86.796 | 568 | 70 | 1 | 1 | 563 | 1 | 568 | 0.0 | 1014 |
| Msa0197140 | MtrunA17_Chr1g0162751 | 40.909 | 550 | 306 | 7 | 26 | 559 | 12 | 558 | 6.47e-135 | 405 |
| Msa0197140 | MtrunA17_Chr6g0487421 | 26.154 | 195 | 137 | 3 | 92 | 286 | 88 | 275 | 6.31e-12 | 68.2 |
| Msa0197140 | MtrunA17_Chr8g0389631 | 26.943 | 193 | 134 | 3 | 92 | 284 | 91 | 276 | 8.50e-12 | 67.8 |
| Msa0197140 | MtrunA17_Chr3g0140611 | 26.842 | 190 | 132 | 3 | 97 | 286 | 97 | 279 | 2.25e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197140 | AT1G12000.1 | 83.598 | 567 | 88 | 2 | 1 | 563 | 1 | 566 | 0.0 | 967 |
| Msa0197140 | AT4G04040.1 | 81.769 | 554 | 101 | 0 | 10 | 563 | 15 | 568 | 0.0 | 947 |
| Msa0197140 | AT1G76550.1 | 41.166 | 549 | 306 | 6 | 26 | 559 | 12 | 558 | 3.86e-141 | 422 |
| Msa0197140 | AT1G20950.1 | 41.652 | 557 | 294 | 8 | 26 | 559 | 12 | 560 | 8.99e-140 | 418 |
| Msa0197140 | AT5G56630.1 | 28.796 | 191 | 129 | 3 | 97 | 287 | 96 | 279 | 4.27e-15 | 78.6 |
| Msa0197140 | AT4G26270.1 | 28.272 | 191 | 130 | 3 | 97 | 287 | 96 | 279 | 1.85e-13 | 73.2 |
| Msa0197140 | AT5G47810.1 | 25.888 | 197 | 133 | 4 | 93 | 286 | 77 | 263 | 5.11e-12 | 68.6 |
| Msa0197140 | AT4G29220.1 | 24.749 | 299 | 209 | 9 | 97 | 392 | 97 | 382 | 2.83e-11 | 66.2 |
Find 170 sgRNAs with CRISPR-Local
Find 431 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCAATAATTTCGTAGTTTA+AGG | 0.053524 | 2_1:-14831185 | Msa0197140:three_prime_UTR |
| TCTGCAGTTGTGCGGCTTAT+GGG | 0.203246 | 2_1:-14833462 | Msa0197140:intron |
| CATCCTAACATAACTATTAT+TGG | 0.204538 | 2_1:-14833396 | Msa0197140:CDS |
| GTCTGCAGTTGTGCGGCTTA+TGG | 0.213367 | 2_1:-14833463 | Msa0197140:intron |
| TTTCCAGCGGCGGAGGATTT+AGG | 0.224933 | 2_1:+14837365 | None:intergenic |
| TGCAGAACTCAATGAAATTC+TGG | 0.244370 | 2_1:-14832977 | Msa0197140:CDS |
| TTGGATGGGCTTGTTGTTAT+TGG | 0.246526 | 2_1:-14835715 | Msa0197140:CDS |
| GTAGGTCCAATTCAATTTAC+TGG | 0.247073 | 2_1:-14831447 | Msa0197140:intron |
| GCCTCCTTGCTGAGAACTTC+AGG | 0.262160 | 2_1:-14835666 | Msa0197140:intron |
| GACTGGTGTAGCAATTCTTC+AGG | 0.271673 | 2_1:+14831549 | None:intergenic |
| TGTGATCGACACGGCTGTTT+TGG | 0.295385 | 2_1:+14837438 | None:intergenic |
| ATGAAATCAATTAGACCTTC+AGG | 0.300562 | 2_1:+14833156 | None:intergenic |
| AAAGAAGTTCCCACAAGCTT+TGG | 0.310744 | 2_1:-14835350 | Msa0197140:CDS |
| TATTGCTATGCTCTTGGTTA+TGG | 0.316262 | 2_1:-14832323 | Msa0197140:CDS |
| AAATACAATGGAGAATTTAA+AGG | 0.320368 | 2_1:-14832648 | Msa0197140:CDS |
| CGACAATGGCGAACGGTGAT+TGG | 0.343899 | 2_1:+14837393 | None:intergenic |
| GTGATTTACACTAGGTTAAA+CGG | 0.351341 | 2_1:-14831126 | Msa0197140:three_prime_UTR |
| AAGCTGTTTCCGTATTTGTT+TGG | 0.353741 | 2_1:-14837251 | Msa0197140:CDS |
| TCTCCAATAATAGTTATGTT+AGG | 0.358732 | 2_1:+14833393 | None:intergenic |
| TATTTATCCTTACAGAAATC+AGG | 0.361150 | 2_1:-14836752 | Msa0197140:intron |
| CCCGGTCCAGTAAATTGAAT+TGG | 0.374237 | 2_1:+14831441 | None:intergenic |
| CACACTCTACTCTTGGAATC+TGG | 0.379491 | 2_1:-14831402 | Msa0197140:CDS |
| ATGATAGATGCCCGATCAAC+CGG | 0.384235 | 2_1:-14834460 | Msa0197140:CDS |
| AAGCATCAATTGTTCTTGAA+TGG | 0.386753 | 2_1:+14832870 | None:intergenic |
| AAGAAGTTCCCACAAGCTTT+GGG | 0.387184 | 2_1:-14835349 | Msa0197140:CDS |
| GTAAACATTATCAAGCAAAT+AGG | 0.394634 | 2_1:+14831153 | None:intergenic |
| AGAGAAAATGCTTATCGAAA+TGG | 0.394743 | 2_1:-14832706 | Msa0197140:CDS |
| GGAAAATTTCAAAAGTAAAC+AGG | 0.396084 | 2_1:+14831282 | None:intergenic |
| TTGCGTCATTGCGGGATGAA+TGG | 0.398609 | 2_1:-14831574 | Msa0197140:CDS |
| AATGTCATCTCTGGAATTTA+CGG | 0.404532 | 2_1:-14837122 | Msa0197140:intron |
| AGATCCACATGGAAATGTTC+AGG | 0.407329 | 2_1:-14832842 | Msa0197140:intron |
| GGCTTCAAAGGTGGTCCTGC+TGG | 0.407979 | 2_1:-14836814 | Msa0197140:CDS |
| ACCATTGCCTTCTTGATCAC+AGG | 0.409812 | 2_1:+14831736 | None:intergenic |
| CTCCTTCATAGCGGCAAGAC+TGG | 0.411431 | 2_1:-14832290 | Msa0197140:CDS |
| TTCCACTTGCACTTTGTTGA+AGG | 0.412741 | 2_1:+14836848 | None:intergenic |
| GTGAGAAAGTAGGTTTGAAA+AGG | 0.420930 | 2_1:+14837633 | None:intergenic |
| TCCTCCGCCGCTGGAAATCC+AGG | 0.423378 | 2_1:-14837359 | Msa0197140:intron |
| TGCGTCATTGCGGGATGAAT+GGG | 0.431137 | 2_1:-14831573 | Msa0197140:CDS |
| TTATCCGGTGGTCAGGCTCC+TGG | 0.435960 | 2_1:-14837152 | Msa0197140:CDS |
| GACATGACCCGTACCTGCTC+TGG | 0.437887 | 2_1:+14835849 | None:intergenic |
| CAGATATATGCAGAAATGAT+TGG | 0.440313 | 2_1:-14834490 | Msa0197140:CDS |
| TATGCTCTTGGTTATGGTGC+TGG | 0.444421 | 2_1:-14832317 | Msa0197140:CDS |
| ATATATGTTTGAAGTGACTT+TGG | 0.445628 | 2_1:+14831084 | None:intergenic |
| CCAACTGTCCACTCTTCTAC+TGG | 0.447024 | 2_1:+14832109 | None:intergenic |
| AATACAATGGAGAATTTAAA+GGG | 0.448600 | 2_1:-14832647 | Msa0197140:CDS |
| TCCAATTCAATTTACTGGAC+CGG | 0.450699 | 2_1:-14831442 | Msa0197140:CDS |
| TTAGTCGTCCTCGTATTTAA+CGG | 0.451427 | 2_1:-14831370 | Msa0197140:exon |
| CCGTAGATGAGGGTGGTTTG+TGG | 0.459050 | 2_1:-14832945 | Msa0197140:CDS |
| GGTGGACACAATGTCATCTC+TGG | 0.459816 | 2_1:-14837131 | Msa0197140:CDS |
| ACCTGGATTTCCAGCGGCGG+AGG | 0.460268 | 2_1:+14837358 | None:intergenic |
| CGAAATGGTTGAAACTGAGT+TGG | 0.461417 | 2_1:-14832691 | Msa0197140:CDS |
| TGATTTGTTTGCAGTTATGA+AGG | 0.461651 | 2_1:-14832380 | Msa0197140:intron |
| GAAATGGTTGAAACTGAGTT+GGG | 0.461966 | 2_1:-14832690 | Msa0197140:CDS |
| TAGTTAGCATCAAAATTAGT+TGG | 0.465386 | 2_1:+14832344 | None:intergenic |
| CGGGGATATTCAATCGGGTT+CGG | 0.465694 | 2_1:-14837700 | Msa0197140:five_prime_UTR |
| TGATTTACACTAGGTTAAAC+GGG | 0.467237 | 2_1:-14831125 | Msa0197140:three_prime_UTR |
| AAATATACCTGATTTCTGTA+AGG | 0.467534 | 2_1:+14836745 | None:intergenic |
| GCGGGTCGGGGATATTCAAT+CGG | 0.470751 | 2_1:-14837706 | None:intergenic |
| CCAATTCAATTTACTGGACC+GGG | 0.471665 | 2_1:-14831441 | Msa0197140:CDS |
| GATGGGCTTGTTGTTATTGG+TGG | 0.472954 | 2_1:-14835712 | Msa0197140:CDS |
| TCTGCTGCTTTAGTGCCTGC+TGG | 0.479714 | 2_1:-14837221 | Msa0197140:CDS |
| GCTAACTATTGCTATGCTCT+TGG | 0.480948 | 2_1:-14832329 | Msa0197140:CDS |
| CTGAAGATAATTATAACTAC+GGG | 0.481753 | 2_1:-14833191 | Msa0197140:CDS |
| CCGTTAGTTACGATTGCAGC+TGG | 0.482063 | 2_1:+14837515 | None:intergenic |
| TGGGTTTGATACTGCTTGCA+AGG | 0.484401 | 2_1:-14835330 | Msa0197140:intron |
| GGATGCCCTAAAACCATTGA+TGG | 0.490692 | 2_1:-14835386 | Msa0197140:CDS |
| GGTCCTAAATCCTCCGCCGC+TGG | 0.491007 | 2_1:-14837368 | Msa0197140:CDS |
| CATAACTATTATTGGAGAAG+AGG | 0.494053 | 2_1:-14833388 | Msa0197140:intron |
| CTGCAGTTGTGCGGCTTATG+GGG | 0.495735 | 2_1:-14833461 | Msa0197140:intron |
| AAGGCAATGGTGGAGCTTGA+AGG | 0.496021 | 2_1:-14831724 | Msa0197140:intron |
| AATTTGAAAACACAGGTGCT+TGG | 0.496070 | 2_1:-14835407 | Msa0197140:CDS |
| GAAACTCACTGATCAGTCAT+TGG | 0.498737 | 2_1:-14832917 | Msa0197140:CDS |
| GCAAGTGGAAGCACATTGTA+TGG | 0.502073 | 2_1:-14836835 | Msa0197140:CDS |
| AAGAATTGCTACACCAGTCC+AGG | 0.502718 | 2_1:-14831545 | Msa0197140:intron |
| TGAGAAAGTAGGTTTGAAAA+GGG | 0.503031 | 2_1:+14837634 | None:intergenic |
| GCTGAAGATAATTATAACTA+CGG | 0.504621 | 2_1:-14833192 | Msa0197140:CDS |
| AGCGCGGTGTTCTCACCAGC+AGG | 0.506534 | 2_1:+14837206 | None:intergenic |
| GTCCAGTCTTGCCGCTATGA+AGG | 0.507211 | 2_1:+14832288 | None:intergenic |
| TGGTCCTGCTGGTATTATGA+AGG | 0.512839 | 2_1:-14836803 | Msa0197140:CDS |
| ACTGGTGTAGCAATTCTTCA+GGG | 0.513137 | 2_1:+14831550 | None:intergenic |
| CCACAAACCACCCTCATCTA+CGG | 0.519922 | 2_1:+14832945 | None:intergenic |
| TTTCCAGCTGGTTCATGAGT+GGG | 0.520080 | 2_1:-14831264 | Msa0197140:three_prime_UTR |
| AGTTAGTCACACTCTACTCT+TGG | 0.524193 | 2_1:-14831409 | Msa0197140:CDS |
| TACCTTCAACAAAGTGCAAG+TGG | 0.527972 | 2_1:-14836850 | Msa0197140:CDS |
| GAAGGTTGTCCAAACAAATA+CGG | 0.529488 | 2_1:+14837242 | None:intergenic |
| AGTATCAAACCCAAAGCTTG+TGG | 0.533894 | 2_1:+14835340 | None:intergenic |
| CTCAGCAAGGAGGCATGCAT+TGG | 0.536923 | 2_1:+14835675 | None:intergenic |
| CCAGTAGAAGAGTGGACAGT+TGG | 0.539844 | 2_1:-14832109 | Msa0197140:CDS |
| TTGGGGAAGAGAAAGCAAGA+AGG | 0.540559 | 2_1:-14832672 | Msa0197140:CDS |
| TGAAATCAATTAGACCTTCA+GGG | 0.541311 | 2_1:+14833157 | None:intergenic |
| TTGAAGTGACTTTGGATGGT+GGG | 0.542696 | 2_1:+14831092 | None:intergenic |
| AACAGCAACAAAGCTAGACT+TGG | 0.544639 | 2_1:-14835734 | Msa0197140:CDS |
| AGCACATTGTATGGCTTCAA+AGG | 0.550475 | 2_1:-14836826 | Msa0197140:CDS |
| TGAGTTCTGCAATAAGATGC+TGG | 0.552498 | 2_1:+14832989 | None:intergenic |
| TCACCGTTCGCCATTGTCGA+TGG | 0.552774 | 2_1:-14837389 | Msa0197140:CDS |
| GTAGAAGAGTGGACAGTTGG+TGG | 0.553506 | 2_1:-14832106 | Msa0197140:CDS |
| AACTGCACTCACCTCACTGA+TGG | 0.554302 | 2_1:-14832083 | Msa0197140:CDS |
| GCAACAAAGCTAGACTTGGA+TGG | 0.554577 | 2_1:-14835730 | Msa0197140:CDS |
| ATGTTTGAAGTGACTTTGGA+TGG | 0.554837 | 2_1:+14831088 | None:intergenic |
| ATTGGAGAACGGAGGGAAGA+CGG | 0.554997 | 2_1:+14837411 | None:intergenic |
| CAACCCACTCATGAACCAGC+TGG | 0.558306 | 2_1:+14831261 | None:intergenic |
| TGACATGATTTGCAGTGGGA+GGG | 0.560107 | 2_1:-14835886 | Msa0197140:CDS |
| GTATCAAACCCAAAGCTTGT+GGG | 0.561643 | 2_1:+14835341 | None:intergenic |
| GCGAAGCGTGTTGTGACGGT+AGG | 0.562383 | 2_1:+14837479 | None:intergenic |
| AATTGTTCTTGAATGGCTTG+AGG | 0.564219 | 2_1:+14832877 | None:intergenic |
| GATTTGTTTGCAGTTATGAA+GGG | 0.564256 | 2_1:-14832379 | Msa0197140:intron |
| TTGCCCTTCATAATACCAGC+AGG | 0.565836 | 2_1:+14836799 | None:intergenic |
| TTGACATGATTTGCAGTGGG+AGG | 0.567120 | 2_1:-14835887 | Msa0197140:CDS |
| GGCTCATGAAACCGTAGATG+AGG | 0.567785 | 2_1:-14832956 | Msa0197140:CDS |
| GGGGTCATTCTTATCCCTGA+AGG | 0.569696 | 2_1:-14833171 | Msa0197140:CDS |
| CAGTCTTGCCGCTATGAAGG+AGG | 0.573181 | 2_1:+14832291 | None:intergenic |
| TGACTAACTGCATCAGATCC+CGG | 0.573605 | 2_1:+14831423 | None:intergenic |
| AGAACACCGCGCTTCCTCAT+CGG | 0.574672 | 2_1:-14837196 | Msa0197140:CDS |
| CAACAAAGCTAGACTTGGAT+GGG | 0.576021 | 2_1:-14835729 | Msa0197140:CDS |
| CGGGTCGGGGATATTCAATC+GGG | 0.581961 | 2_1:-14837705 | None:intergenic |
| CAAGATTGAAACTCCAGAGC+AGG | 0.582178 | 2_1:-14835862 | Msa0197140:intron |
| AACGGTGATTGGAGAACGGA+GGG | 0.583430 | 2_1:+14837404 | None:intergenic |
| AAGCGAGTACAAACCTGGAC+TGG | 0.584947 | 2_1:+14831532 | None:intergenic |
| ATTCAAGCCTGTGATCAAGA+AGG | 0.586133 | 2_1:-14831743 | Msa0197140:CDS |
| AAGCAAGAAGGAAAATACAA+TGG | 0.589804 | 2_1:-14832660 | Msa0197140:CDS |
| TGTGATCAAGAAGGCAATGG+TGG | 0.590592 | 2_1:-14831734 | Msa0197140:CDS |
| GAGATGACATTGTGTCCACC+AGG | 0.594572 | 2_1:+14837134 | None:intergenic |
| GGATTTAGGACCATCGACAA+TGG | 0.596242 | 2_1:+14837379 | None:intergenic |
| GCAGGCACTAAAGCAGCAGA+AGG | 0.599111 | 2_1:+14837224 | None:intergenic |
| CCTCATCGGAAGTTGAAGAT+CGG | 0.601673 | 2_1:-14837182 | Msa0197140:CDS |
| TGCAGTTATGAAGGGAGATG+CGG | 0.603270 | 2_1:-14832371 | Msa0197140:intron |
| TTACTGAGGTGATTTACACT+AGG | 0.603549 | 2_1:-14831134 | Msa0197140:three_prime_UTR |
| TTTGAAGTGACTTTGGATGG+TGG | 0.603662 | 2_1:+14831091 | None:intergenic |
| TGTGACGGTAGGTGTGGCGG+TGG | 0.606640 | 2_1:+14837490 | None:intergenic |
| CCTCACTGATGGACGTGGAG+AGG | 0.608112 | 2_1:-14832072 | Msa0197140:CDS |
| GCCTGTGATCAAGAAGGCAA+TGG | 0.608219 | 2_1:-14831737 | Msa0197140:CDS |
| TCCACCAGGAGCCTGACCAC+CGG | 0.608646 | 2_1:+14837148 | None:intergenic |
| GCTCATGAAACCGTAGATGA+GGG | 0.612579 | 2_1:-14832955 | Msa0197140:CDS |
| TCCGGTGGTCAGGCTCCTGG+TGG | 0.614011 | 2_1:-14837149 | Msa0197140:CDS |
| ATCATCTGTCTGCAGTTGTG+CGG | 0.614924 | 2_1:-14833470 | Msa0197140:intron |
| AGTCTTGCCGCTATGAAGGA+GGG | 0.616423 | 2_1:+14832292 | None:intergenic |
| GGTCCTGCTGGTATTATGAA+GGG | 0.617866 | 2_1:-14836802 | Msa0197140:CDS |
| ACTCACCTCACTGATGGACG+TGG | 0.618234 | 2_1:-14832077 | Msa0197140:CDS |
| TGCAGCTTCACACATTACAC+TGG | 0.619084 | 2_1:-14833436 | Msa0197140:CDS |
| GTGGTGGTGAGTGAGAAAGT+AGG | 0.620866 | 2_1:+14837623 | None:intergenic |
| CAAGACTGGACTAATATCAT+CGG | 0.623420 | 2_1:-14832276 | Msa0197140:intron |
| GGAGGCGAAGCGTGTTGTGA+CGG | 0.625285 | 2_1:+14837475 | None:intergenic |
| ATGGACGTGGAGAGGAGACA+TGG | 0.626257 | 2_1:-14832064 | Msa0197140:intron |
| GCGTGTTGTGACGGTAGGTG+TGG | 0.631140 | 2_1:+14837484 | None:intergenic |
| TCTAATTGATTTCATTCCCG+AGG | 0.633595 | 2_1:-14833148 | Msa0197140:intron |
| GGCGAACGGTGATTGGAGAA+CGG | 0.637641 | 2_1:+14837400 | None:intergenic |
| ACATTGTATGGCTTCAAAGG+TGG | 0.640509 | 2_1:-14836823 | Msa0197140:CDS |
| GAACGGTGATTGGAGAACGG+AGG | 0.640933 | 2_1:+14837403 | None:intergenic |
| CCAGCTGCAATCGTAACTAA+CGG | 0.641149 | 2_1:-14837515 | Msa0197140:CDS |
| GTCGTCCTCGTATTTAACGG+TGG | 0.645978 | 2_1:-14831367 | Msa0197140:three_prime_UTR |
| TTGGACTTCGCTGTAGACGG+AGG | 0.647309 | 2_1:+14837457 | None:intergenic |
| TGTGTGCTCCAGTAGAAGAG+TGG | 0.652271 | 2_1:-14832117 | Msa0197140:CDS |
| TTGCTTGATAATGTTTACTG+AGG | 0.661397 | 2_1:-14831148 | Msa0197140:three_prime_UTR |
| CAAACCTGAAGTTCTCAGCA+AGG | 0.663042 | 2_1:+14835662 | None:intergenic |
| AGATTTACCTGGATTTCCAG+CGG | 0.671392 | 2_1:+14837352 | None:intergenic |
| AAATGGTTGAAACTGAGTTG+GGG | 0.673107 | 2_1:-14832689 | Msa0197140:CDS |
| TGTTGTGACGGTAGGTGTGG+CGG | 0.675312 | 2_1:+14837487 | None:intergenic |
| CCGATCTTCAACTTCCGATG+AGG | 0.676892 | 2_1:+14837182 | None:intergenic |
| CCTCTCCACGTCCATCAGTG+AGG | 0.681684 | 2_1:+14832072 | None:intergenic |
| CAACTTCCGATGAGGAAGCG+CGG | 0.690901 | 2_1:+14837190 | None:intergenic |
| CATGAAACCGTAGATGAGGG+TGG | 0.691612 | 2_1:-14832952 | Msa0197140:CDS |
| TTTACCTGGATTTCCAGCGG+CGG | 0.695970 | 2_1:+14837355 | None:intergenic |
| GGTACCTGAACATTTCCATG+TGG | 0.696702 | 2_1:+14832838 | None:intergenic |
| GGACCATCGACAATGGCGAA+CGG | 0.702158 | 2_1:+14837386 | None:intergenic |
| ACCTGAAGTTCTCAGCAAGG+AGG | 0.711928 | 2_1:+14835665 | None:intergenic |
| AATTGCCACCGTTAAATACG+AGG | 0.712926 | 2_1:+14831362 | None:intergenic |
| ATGCTTGAAAGAGATCCACA+TGG | 0.713475 | 2_1:-14832853 | Msa0197140:CDS |
| GACGGAGTTTGTGATCGACA+CGG | 0.731354 | 2_1:+14837429 | None:intergenic |
| GCTGGAGCCCTCCTTCATAG+CGG | 0.737347 | 2_1:-14832299 | Msa0197140:CDS |
| TGAAGATAATTATAACTACG+GGG | 0.801654 | 2_1:-14833190 | Msa0197140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATACACATTTAATTATTAT+AGG | + | chr2_1:14831742-14831761 | None:intergenic | 10.0% |
| !!! | AATTGTATATTTTATTTATG+AGG | - | chr2_1:14832166-14832185 | Msa0197140:intron | 10.0% |
| !!! | ATTGTATATTTTATTTATGA+GGG | - | chr2_1:14832167-14832186 | Msa0197140:intron | 10.0% |
| !! | ATTATAATATTTAATATTCC+CGG | - | chr2_1:14833618-14833637 | Msa0197140:intron | 10.0% |
| !! | AATTAGTAAATTGTTAAAAA+AGG | + | chr2_1:14834648-14834667 | None:intergenic | 10.0% |
| !!! | TAATTTTAAATCTAAGTTAA+TGG | + | chr2_1:14836259-14836278 | None:intergenic | 10.0% |
| !! | AAAATATTTATATAACCTAA+AGG | + | chr2_1:14836822-14836841 | None:intergenic | 10.0% |
| !! | TGTCAAAAAAAAATAATTGA+CGG | + | chr2_1:14832283-14832302 | None:intergenic | 15.0% |
| !! | GTAAATTAAAATTACATTTC+AGG | + | chr2_1:14832950-14832969 | None:intergenic | 15.0% |
| !!! | GTTTTTTTCTATTTATGAAT+AGG | - | chr2_1:14833232-14833251 | Msa0197140:CDS | 15.0% |
| !! | AACAAAAATAATAGATACAT+AGG | + | chr2_1:14833271-14833290 | None:intergenic | 15.0% |
| !!! | TATTTGAAATGTTTTAAGTA+TGG | + | chr2_1:14833482-14833501 | None:intergenic | 15.0% |
| !! | TTATAATATTTAATATTCCC+GGG | - | chr2_1:14833619-14833638 | Msa0197140:intron | 15.0% |
| !! | AATCAAATAAACATAAAAAC+AGG | + | chr2_1:14834220-14834239 | None:intergenic | 15.0% |
| !! | TTAATATCCAATAATCTATA+CGG | - | chr2_1:14834421-14834440 | Msa0197140:intron | 15.0% |
| !!! | TATTGATTCTAACTTTATAA+AGG | + | chr2_1:14835956-14835975 | None:intergenic | 15.0% |
| !!! | ATTTGTTTTTGAAAGAAAGA+GGG | + | chr2_1:14831132-14831151 | None:intergenic | 20.0% |
| !! | TAATTAAATGTGTATAACAC+CGG | - | chr2_1:14831746-14831765 | Msa0197140:CDS | 20.0% |
| !!! | TTAATACGTATTGTTTTAGT+AGG | - | chr2_1:14831824-14831843 | Msa0197140:intron | 20.0% |
| !!! | TATTTGATTAGCTGAATTTT+TGG | - | chr2_1:14832020-14832039 | Msa0197140:intron | 20.0% |
| !! | ACTTATAATGAGTTATTAAG+CGG | - | chr2_1:14832546-14832565 | Msa0197140:intron | 20.0% |
| !!! | AATTTACATGTTTCTAAACT+TGG | - | chr2_1:14832670-14832689 | Msa0197140:CDS | 20.0% |
| !! | TTAAATTAAATGTCAACATG+TGG | + | chr2_1:14832791-14832810 | None:intergenic | 20.0% |
| !! | TAAAGATAATGATTTCTTTC+AGG | - | chr2_1:14832814-14832833 | Msa0197140:intron | 20.0% |
| !! | AAAGATAATGATTTCTTTCA+GGG | - | chr2_1:14832815-14832834 | Msa0197140:intron | 20.0% |
| !!! | TCTTATCAGAGTTTTATTTT+TGG | - | chr2_1:14833091-14833110 | Msa0197140:intron | 20.0% |
| !!! | ATTAGTTGGTATAATATGAA+TGG | - | chr2_1:14833208-14833227 | Msa0197140:CDS | 20.0% |
| !! | AGTTTACTAAATTTATTCCT+AGG | - | chr2_1:14833553-14833572 | Msa0197140:intron | 20.0% |
| !!! | CATCTTTTTTAAAAATAGCT+TGG | + | chr2_1:14833588-14833607 | None:intergenic | 20.0% |
| !!! | GATTAGTAAATTTTATTCCT+GGG | + | chr2_1:14833762-14833781 | None:intergenic | 20.0% |
| !! | ATTCTTACATTTATTCCTTT+GGG | + | chr2_1:14833862-14833881 | None:intergenic | 20.0% |
| !!! | TAATATTTTGGAGTATTTCA+GGG | + | chr2_1:14834127-14834146 | None:intergenic | 20.0% |
| !!! | TTAATATTTTGGAGTATTTC+AGG | + | chr2_1:14834128-14834147 | None:intergenic | 20.0% |
| !!! | GCATTGGTAAATTAATATTT+TGG | + | chr2_1:14834139-14834158 | None:intergenic | 20.0% |
| !! | GAATGGTTTATCTAATTTAT+TGG | - | chr2_1:14834945-14834964 | Msa0197140:intron | 20.0% |
| !!! | TTTAATTGAAGTTTGCTAAT+TGG | - | chr2_1:14835404-14835423 | Msa0197140:CDS | 20.0% |
| !!! | ACAGATCAAATTTTGATAAA+GGG | + | chr2_1:14835437-14835456 | None:intergenic | 20.0% |
| !!! | TACAGATCAAATTTTGATAA+AGG | + | chr2_1:14835438-14835457 | None:intergenic | 20.0% |
| !! | TTAACAATGTTTACTCTTTA+TGG | - | chr2_1:14835624-14835643 | Msa0197140:intron | 20.0% |
| !!! | TTATAGTGTTTTGAAACATT+AGG | + | chr2_1:14835916-14835935 | None:intergenic | 20.0% |
| !! | ATCAATATCATTGTTAACAT+TGG | - | chr2_1:14835969-14835988 | Msa0197140:intron | 20.0% |
| !! | AAATACAATGGAGAATTTAA+AGG | - | chr2_1:14836082-14836101 | Msa0197140:intron | 20.0% |
| !! | AATACAATGGAGAATTTAAA+GGG | - | chr2_1:14836083-14836102 | Msa0197140:intron | 20.0% |
| !!! | TGAATGTTTTTTTCATTGTT+TGG | - | chr2_1:14836930-14836949 | Msa0197140:intron | 20.0% |
| !! | ATGCTAATTATATTACATGT+TGG | - | chr2_1:14837106-14837125 | Msa0197140:intron | 20.0% |
| !! | ATAAAAAAACCACAATACAA+TGG | + | chr2_1:14837695-14837714 | None:intergenic | 20.0% |
| !!! | GATTTGTTTTTGAAAGAAAG+AGG | + | chr2_1:14831133-14831152 | None:intergenic | 25.0% |
| ! | GATTCACTATTTGATTGATT+TGG | + | chr2_1:14831651-14831670 | None:intergenic | 25.0% |
| !!! | TGTTTTAGTAGGTTTTGATT+TGG | - | chr2_1:14831835-14831854 | Msa0197140:intron | 25.0% |
| ! | TATTTATCCTTACAGAAATC+AGG | - | chr2_1:14831978-14831997 | Msa0197140:intron | 25.0% |
| ! | AAATATACCTGATTTCTGTA+AGG | + | chr2_1:14831988-14832007 | None:intergenic | 25.0% |
| ! | TTACAGAAATCAGGTATATT+TGG | - | chr2_1:14831987-14832006 | Msa0197140:intron | 25.0% |
| !!! | AGCTGAATTTTTGGAAATTT+AGG | - | chr2_1:14832029-14832048 | Msa0197140:intron | 25.0% |
| !!! | GTATATTTTATTTATGAGGG+TGG | - | chr2_1:14832170-14832189 | Msa0197140:intron | 25.0% |
| ! | ATCAGATATCAAAGTTACTT+CGG | + | chr2_1:14832208-14832227 | None:intergenic | 25.0% |
| ! | AAAATAATTGACGGTTGAAT+TGG | + | chr2_1:14832274-14832293 | None:intergenic | 25.0% |
| ! | AAAACACGAGTAAATCTTTA+TGG | - | chr2_1:14832421-14832440 | Msa0197140:intron | 25.0% |
| !! | ACTCATCTTGAAGATAATTT+TGG | - | chr2_1:14832573-14832592 | Msa0197140:intron | 25.0% |
| ! | TCACAATATAAAGAAAACGT+GGG | + | chr2_1:14832611-14832630 | None:intergenic | 25.0% |
| ! | ATGTGTTTGTGTTTAAATCT+TGG | - | chr2_1:14832749-14832768 | Msa0197140:intron | 25.0% |
| ! | ATTTAATTAACAAAGCTTCC+CGG | + | chr2_1:14833123-14833142 | None:intergenic | 25.0% |
| !!! | ACTTTAATTTGAATTTGTGC+AGG | - | chr2_1:14833294-14833313 | Msa0197140:intron | 25.0% |
| ! | TAAATTTATTCCCATCTTCA+TGG | - | chr2_1:14833679-14833698 | Msa0197140:intron | 25.0% |
| ! | AAATTTATTCCCATCTTCAT+GGG | - | chr2_1:14833680-14833699 | Msa0197140:intron | 25.0% |
| !!! | GGATTAGTAAATTTTATTCC+TGG | + | chr2_1:14833763-14833782 | None:intergenic | 25.0% |
| ! | ACTAATCCTTTAACAAACAT+AGG | - | chr2_1:14833775-14833794 | Msa0197140:intron | 25.0% |
| !! | CATATTCCTATGTTTGTTAA+AGG | + | chr2_1:14833784-14833803 | None:intergenic | 25.0% |
| ! | ATTTCTATCAATTTATTCCC+AGG | - | chr2_1:14833805-14833824 | Msa0197140:intron | 25.0% |
| !!! | AGTTATTTTTGTAGATTCCT+GGG | + | chr2_1:14833825-14833844 | None:intergenic | 25.0% |
| !!! | AAGTTATTTTTGTAGATTCC+TGG | + | chr2_1:14833826-14833845 | None:intergenic | 25.0% |
| ! | TTCTTACATTTATTCCTTTG+GGG | + | chr2_1:14833861-14833880 | None:intergenic | 25.0% |
| ! | GATTCTTACATTTATTCCTT+TGG | + | chr2_1:14833863-14833882 | None:intergenic | 25.0% |
| ! | GGATTATCTAGTAGATTATT+AGG | - | chr2_1:14833910-14833929 | Msa0197140:intron | 25.0% |
| !! | TTTGAAATAGATGATGATAG+TGG | + | chr2_1:14833992-14834011 | None:intergenic | 25.0% |
| !!! | AATTGAGGTTTTTTTTTGGT+TGG | + | chr2_1:14834026-14834045 | None:intergenic | 25.0% |
| ! | AACCAAAAAAAAACCTCAAT+TGG | - | chr2_1:14834025-14834044 | Msa0197140:intron | 25.0% |
| ! | TAAAAACAGGAAAATAAGTC+AGG | + | chr2_1:14834207-14834226 | None:intergenic | 25.0% |
| !! | TAAAAGTTTAAGACTTTGCA+TGG | - | chr2_1:14834347-14834366 | Msa0197140:intron | 25.0% |
| ! | TTTGCTTTAACATAAGCAAA+GGG | + | chr2_1:14834695-14834714 | None:intergenic | 25.0% |
| !! | TTTTGCTTTAACATAAGCAA+AGG | + | chr2_1:14834696-14834715 | None:intergenic | 25.0% |
| ! | CATTCATTAACAAATCATGA+GGG | + | chr2_1:14834835-14834854 | None:intergenic | 25.0% |
| ! | ACATTCATTAACAAATCATG+AGG | + | chr2_1:14834836-14834855 | None:intergenic | 25.0% |
| !! | CTTCAGATTTTCAATTCATA+TGG | - | chr2_1:14835105-14835124 | Msa0197140:intron | 25.0% |
| ! | CATCCTAACATAACTATTAT+TGG | - | chr2_1:14835334-14835353 | Msa0197140:CDS | 25.0% |
| ! | TCTCCAATAATAGTTATGTT+AGG | + | chr2_1:14835340-14835359 | None:intergenic | 25.0% |
| ! | GCTGAAGATAATTATAACTA+CGG | - | chr2_1:14835538-14835557 | Msa0197140:intron | 25.0% |
| ! | CTGAAGATAATTATAACTAC+GGG | - | chr2_1:14835539-14835558 | Msa0197140:intron | 25.0% |
| ! | TGAAGATAATTATAACTACG+GGG | - | chr2_1:14835540-14835559 | Msa0197140:intron | 25.0% |
| !!! | CATTTTCTCTGTTTCTATTT+TGG | + | chr2_1:14836014-14836033 | None:intergenic | 25.0% |
| ! | TAGTTAGCATCAAAATTAGT+TGG | + | chr2_1:14836389-14836408 | None:intergenic | 25.0% |
| ! | CGTAGAAAAATATTATTGCA+TGG | + | chr2_1:14836746-14836765 | None:intergenic | 25.0% |
| ! | ATTCTTAATCAAACACCTTT+AGG | - | chr2_1:14836804-14836823 | Msa0197140:CDS | 25.0% |
| !! | GAATATGTAATTTTCTCTTC+AGG | - | chr2_1:14836961-14836980 | Msa0197140:intron | 25.0% |
| ! | CTCTAAATCTTTAATGATTC+AGG | - | chr2_1:14837037-14837056 | Msa0197140:intron | 25.0% |
| ! | ATTATAACTCACTACTTTAG+TGG | + | chr2_1:14837078-14837097 | None:intergenic | 25.0% |
| ! | ACTTAATACATAATGTGGAA+AGG | + | chr2_1:14837232-14837251 | None:intergenic | 25.0% |
| !! | TATTTTATCTGATACTAGCT+AGG | - | chr2_1:14837415-14837434 | Msa0197140:CDS | 25.0% |
| ! | GGAAAATTTCAAAAGTAAAC+AGG | + | chr2_1:14837451-14837470 | None:intergenic | 25.0% |
| !! | TCTGATGTTGCATTTTATAT+CGG | - | chr2_1:14837509-14837528 | Msa0197140:CDS | 25.0% |
| ! | GTCAATAATTTCGTAGTTTA+AGG | - | chr2_1:14837545-14837564 | Msa0197140:five_prime_UTR | 25.0% |
| ! | GTAAACATTATCAAGCAAAT+AGG | + | chr2_1:14837580-14837599 | None:intergenic | 25.0% |
| !! | ATATATGTTTGAAGTGACTT+TGG | + | chr2_1:14837649-14837668 | None:intergenic | 25.0% |
| TGAGAAAGTAGGTTTGAAAA+GGG | + | chr2_1:14831099-14831118 | None:intergenic | 30.0% | |
| ATCGAAGTGAATGAAATGAA+CGG | + | chr2_1:14831407-14831426 | None:intergenic | 30.0% | |
| !! | AATGTCATCTCTGGAATTTA+CGG | - | chr2_1:14831608-14831627 | Msa0197140:intron | 30.0% |
| TACATATAGACTATAGACTC+CGG | - | chr2_1:14831677-14831696 | Msa0197140:intron | 30.0% | |
| !! | AATTAGAAGTGTCTATGCTA+CGG | - | chr2_1:14831779-14831798 | Msa0197140:intron | 30.0% |
| ACGGAGATCATATATAGATA+TGG | - | chr2_1:14831798-14831817 | Msa0197140:intron | 30.0% | |
| ATCTTCACTTGATTGAACAT+TGG | - | chr2_1:14832079-14832098 | Msa0197140:CDS | 30.0% | |
| !!! | TCAACTTTTGTTTTTGCAAG+AGG | - | chr2_1:14832113-14832132 | Msa0197140:CDS | 30.0% |
| AAATATACAATTACCGCAAC+AGG | + | chr2_1:14832158-14832177 | None:intergenic | 30.0% | |
| TCAGATATCAAAGTTACTTC+GGG | + | chr2_1:14832207-14832226 | None:intergenic | 30.0% | |
| TTATGACAATAATCAACTGC+TGG | - | chr2_1:14832507-14832526 | Msa0197140:intron | 30.0% | |
| CACAATATAAAGAAAACGTG+GGG | + | chr2_1:14832610-14832629 | None:intergenic | 30.0% | |
| GTCACAATATAAAGAAAACG+TGG | + | chr2_1:14832612-14832631 | None:intergenic | 30.0% | |
| !! | CAAGATTTTAACACGTTCAA+CGG | - | chr2_1:14832704-14832723 | Msa0197140:CDS | 30.0% |
| !!! | GTTTTATTTTTGGCATAAGC+CGG | - | chr2_1:14833101-14833120 | Msa0197140:intron | 30.0% |
| !!! | TTTTATTTTTGGCATAAGCC+GGG | - | chr2_1:14833102-14833121 | Msa0197140:intron | 30.0% |
| TAATTACATGATAGACAGAG+TGG | + | chr2_1:14833192-14833211 | None:intergenic | 30.0% | |
| CTGTCTATCATGTAATTAGT+TGG | - | chr2_1:14833194-14833213 | Msa0197140:CDS | 30.0% | |
| GAGCAAAAATTTGAAAACAC+AGG | - | chr2_1:14833316-14833335 | Msa0197140:intron | 30.0% | |
| !! | AATCACCATCAATGGTTTTA+GGG | + | chr2_1:14833352-14833371 | None:intergenic | 30.0% |
| ! | AAATCACCATCAATGGTTTT+AGG | + | chr2_1:14833353-14833372 | None:intergenic | 30.0% |
| ! | TTAATCACCTGTAATTTGCA+AGG | - | chr2_1:14833516-14833535 | Msa0197140:intron | 30.0% |
| ! | TAATCACCTGTAATTTGCAA+GGG | - | chr2_1:14833517-14833536 | Msa0197140:intron | 30.0% |
| TAGCTTGGAAATTTATTCCT+AGG | + | chr2_1:14833573-14833592 | None:intergenic | 30.0% | |
| TATTAACCTCCCTGTTATAA+AGG | + | chr2_1:14833647-14833666 | None:intergenic | 30.0% | |
| TTTATAACAGGGAGGTTAAT+AGG | - | chr2_1:14833646-14833665 | Msa0197140:intron | 30.0% | |
| AATAAAGTTCCCATGAAGAT+GGG | + | chr2_1:14833692-14833711 | None:intergenic | 30.0% | |
| GGAATATTTCCCAAAGAAAA+GGG | + | chr2_1:14833719-14833738 | None:intergenic | 30.0% | |
| AGGAATATTTCCCAAAGAAA+AGG | + | chr2_1:14833720-14833739 | None:intergenic | 30.0% | |
| !!! | TGCCAATTGAGGTTTTTTTT+TGG | + | chr2_1:14834030-14834049 | None:intergenic | 30.0% |
| ATATGCAACATTTAGCAGTT+GGG | + | chr2_1:14834168-14834187 | None:intergenic | 30.0% | |
| AATATGCAACATTTAGCAGT+TGG | + | chr2_1:14834169-14834188 | None:intergenic | 30.0% | |
| CAGATATATGCAGAAATGAT+TGG | - | chr2_1:14834240-14834259 | Msa0197140:intron | 30.0% | |
| ! | CTCACAATGGTAATATTTTC+CGG | + | chr2_1:14834292-14834311 | None:intergenic | 30.0% |
| AATATTACCATTGTGAGTTC+AGG | - | chr2_1:14834295-14834314 | Msa0197140:intron | 30.0% | |
| ! | TTAATGCATCTTTTTCTCCA+TGG | - | chr2_1:14834386-14834405 | Msa0197140:intron | 30.0% |
| CTCATTTAGATATTGGAGTA+TGG | + | chr2_1:14834612-14834631 | None:intergenic | 30.0% | |
| CATACTCCAATATCTAAATG+AGG | - | chr2_1:14834610-14834629 | Msa0197140:intron | 30.0% | |
| CATGATCCTCATTTAGATAT+TGG | + | chr2_1:14834619-14834638 | None:intergenic | 30.0% | |
| TTGCTTTAACATAAGCAAAG+GGG | + | chr2_1:14834694-14834713 | None:intergenic | 30.0% | |
| CATTGACAACATGCTTATTA+TGG | - | chr2_1:14834716-14834735 | Msa0197140:intron | 30.0% | |
| ATGGATATCATCATCTTAAC+CGG | - | chr2_1:14834735-14834754 | Msa0197140:intron | 30.0% | |
| CTGAGTTGTAATAATACTCA+TGG | - | chr2_1:14834911-14834930 | Msa0197140:intron | 30.0% | |
| ! | CAGATTTTCAATTCATATGG+CGG | - | chr2_1:14835108-14835127 | Msa0197140:intron | 30.0% |
| CATAACTATTATTGGAGAAG+AGG | - | chr2_1:14835342-14835361 | Msa0197140:CDS | 30.0% | |
| GATCTGTAAATATGCATTAC+AGG | - | chr2_1:14835450-14835469 | Msa0197140:intron | 30.0% | |
| TGAAATCAATTAGACCTTCA+GGG | + | chr2_1:14835576-14835595 | None:intergenic | 30.0% | |
| ATGAAATCAATTAGACCTTC+AGG | + | chr2_1:14835577-14835596 | None:intergenic | 30.0% | |
| GACTTGCAATTATGTATTGT+TGG | - | chr2_1:14835646-14835665 | Msa0197140:intron | 30.0% | |
| AAGCATCAATTGTTCTTGAA+TGG | + | chr2_1:14835863-14835882 | None:intergenic | 30.0% | |
| ACATTGGTATATTTACATCC+AGG | - | chr2_1:14835985-14836004 | Msa0197140:intron | 30.0% | |
| AGAGAAAATGCTTATCGAAA+TGG | - | chr2_1:14836024-14836043 | Msa0197140:intron | 30.0% | |
| AAGCAAGAAGGAAAATACAA+TGG | - | chr2_1:14836070-14836089 | Msa0197140:intron | 30.0% | |
| AGCATCGTATAAATGTTCAA+TGG | + | chr2_1:14836167-14836186 | None:intergenic | 30.0% | |
| AGCATCGTATAAATGTTCAA+TGG | + | chr2_1:14836167-14836186 | None:intergenic | 30.0% | |
| CATTTATACGATGCTAAAAG+AGG | - | chr2_1:14836205-14836224 | Msa0197140:intron | 30.0% | |
| TAAAAGAGGTTATAGAGACT+TGG | - | chr2_1:14836219-14836238 | Msa0197140:intron | 30.0% | |
| AAAAGAGGTTATAGAGACTT+GGG | - | chr2_1:14836220-14836239 | Msa0197140:intron | 30.0% | |
| CATAACTGCAAACAAATCAA+GGG | + | chr2_1:14836349-14836368 | None:intergenic | 30.0% | |
| TCATAACTGCAAACAAATCA+AGG | + | chr2_1:14836350-14836369 | None:intergenic | 30.0% | |
| !! | TGATTTGTTTGCAGTTATGA+AGG | - | chr2_1:14836350-14836369 | Msa0197140:intron | 30.0% |
| ! | GATTTGTTTGCAGTTATGAA+GGG | - | chr2_1:14836351-14836370 | Msa0197140:intron | 30.0% |
| ! | TTTGCTATGATACTTTGATC+AGG | - | chr2_1:14836581-14836600 | Msa0197140:intron | 30.0% |
| TATGATACTTTGATCAGGTT+GGG | - | chr2_1:14836586-14836605 | Msa0197140:intron | 30.0% | |
| ! | TCTACGATTTTGTAAACACT+TGG | - | chr2_1:14836760-14836779 | Msa0197140:CDS | 30.0% |
| TTTGTAAACACTTGGATCTA+TGG | - | chr2_1:14836768-14836787 | Msa0197140:CDS | 30.0% | |
| TATTACATGTTGGATTGTTC+AGG | - | chr2_1:14837116-14837135 | Msa0197140:intron | 30.0% | |
| ATTACATGTTGGATTGTTCA+GGG | - | chr2_1:14837117-14837136 | Msa0197140:intron | 30.0% | |
| ! | AATGACGCAAACTTTTTGAA+GGG | + | chr2_1:14837146-14837165 | None:intergenic | 30.0% |
| GCTGAACTTAATACATAATG+TGG | + | chr2_1:14837237-14837256 | None:intergenic | 30.0% | |
| !!! | TACTTTTGAAATTTTCCAGC+TGG | - | chr2_1:14837454-14837473 | Msa0197140:CDS | 30.0% |
| !! | TTGCTTGATAATGTTTACTG+AGG | - | chr2_1:14837582-14837601 | Msa0197140:five_prime_UTR | 30.0% |
| GTGATTTACACTAGGTTAAA+CGG | - | chr2_1:14837604-14837623 | Msa0197140:five_prime_UTR | 30.0% | |
| TGATTTACACTAGGTTAAAC+GGG | - | chr2_1:14837605-14837624 | Msa0197140:five_prime_UTR | 30.0% | |
| GTGAGAAAGTAGGTTTGAAA+AGG | + | chr2_1:14831100-14831119 | None:intergenic | 35.0% | |
| !! | TGTTTTTGAAAGAAAGAGGG+TGG | + | chr2_1:14831129-14831148 | None:intergenic | 35.0% |
| TCTCTCTCTCTCTCAAAAAA+TGG | - | chr2_1:14831190-14831209 | Msa0197140:three_prime_UTR | 35.0% | |
| ! | AAGCTGTTTCCGTATTTGTT+TGG | - | chr2_1:14831479-14831498 | Msa0197140:intron | 35.0% |
| GAAGGTTGTCCAAACAAATA+CGG | + | chr2_1:14831491-14831510 | None:intergenic | 35.0% | |
| !!! | AAGATCGGTGTTGTTTTATC+CGG | - | chr2_1:14831563-14831582 | Msa0197140:CDS | 35.0% |
| !! | TATTATAGGTGTTGACGTGT+CGG | + | chr2_1:14831728-14831747 | None:intergenic | 35.0% |
| ! | CTTCTAATTGAAGGTGTATC+CGG | + | chr2_1:14831768-14831787 | None:intergenic | 35.0% |
| GCATAGACACTTCTAATTGA+AGG | + | chr2_1:14831777-14831796 | None:intergenic | 35.0% | |
| GAAATAGATTTGACCTGTTG+CGG | - | chr2_1:14832142-14832161 | Msa0197140:intron | 35.0% | |
| GATAATGATTTCTTTCAGGG+TGG | - | chr2_1:14832818-14832837 | Msa0197140:intron | 35.0% | |
| !! | GTTTTGACATGATTTGCAGT+GGG | - | chr2_1:14832840-14832859 | Msa0197140:intron | 35.0% |
| AATTTGAAAACACAGGTGCT+TGG | - | chr2_1:14833323-14833342 | Msa0197140:intron | 35.0% | |
| ! | GCTTTTCAAATCACCATCAA+TGG | + | chr2_1:14833360-14833379 | None:intergenic | 35.0% |
| ! | AATCACCTGTAATTTGCAAG+GGG | - | chr2_1:14833518-14833537 | Msa0197140:intron | 35.0% |
| GAATAAAGTTCCCATGAAGA+TGG | + | chr2_1:14833693-14833712 | None:intergenic | 35.0% | |
| ! | TTTATTCCCACCCTTTTCTT+TGG | - | chr2_1:14833706-14833725 | Msa0197140:intron | 35.0% |
| ! | TTATTCCCACCCTTTTCTTT+GGG | - | chr2_1:14833707-14833726 | Msa0197140:intron | 35.0% |
| TATTTCCCAAAGAAAAGGGT+GGG | + | chr2_1:14833715-14833734 | None:intergenic | 35.0% | |
| ATATTTCCCAAAGAAAAGGG+TGG | + | chr2_1:14833716-14833735 | None:intergenic | 35.0% | |
| !! | TCACTTTTACACGTGGTAAA+TGG | - | chr2_1:14833889-14833908 | Msa0197140:intron | 35.0% |
| TGAAAAAGTCATGCCAATTG+AGG | + | chr2_1:14834041-14834060 | None:intergenic | 35.0% | |
| ! | TTTTCAACTCTTCTTGTGCT+TGG | - | chr2_1:14834055-14834074 | Msa0197140:intron | 35.0% |
| ! | GTAATATTTTCCGGTTGATC+GGG | + | chr2_1:14834283-14834302 | None:intergenic | 35.0% |
| ! | GGTAATATTTTCCGGTTGAT+CGG | + | chr2_1:14834284-14834303 | None:intergenic | 35.0% |
| TCAAATTCCTGAACTCACAA+TGG | + | chr2_1:14834305-14834324 | None:intergenic | 35.0% | |
| ATTAACAGAAGCAATGTCCA+TGG | + | chr2_1:14834406-14834425 | None:intergenic | 35.0% | |
| ACAGAAGCCGTATAGATTAT+TGG | + | chr2_1:14834431-14834450 | None:intergenic | 35.0% | |
| ATAATCTATACGGCTTCTGT+TGG | - | chr2_1:14834431-14834450 | Msa0197140:intron | 35.0% | |
| !! | ATTATAGCAGTAGTTCTGAG+GGG | + | chr2_1:14834503-14834522 | None:intergenic | 35.0% |
| !! | CATTATAGCAGTAGTTCTGA+GGG | + | chr2_1:14834504-14834523 | None:intergenic | 35.0% |
| ! | ACATTATAGCAGTAGTTCTG+AGG | + | chr2_1:14834505-14834524 | None:intergenic | 35.0% |
| AAGAATAGAAAAGATGACCC+CGG | + | chr2_1:14834552-14834571 | None:intergenic | 35.0% | |
| ! | TTTGTTATCTCTGGCTGTAT+TGG | + | chr2_1:14834588-14834607 | None:intergenic | 35.0% |
| !!! | GAGTATGGTTTTGTTATCTC+TGG | + | chr2_1:14834597-14834616 | None:intergenic | 35.0% |
| CTGATATCATACAAGTCAAG+GGG | + | chr2_1:14834765-14834784 | None:intergenic | 35.0% | |
| GCTGATATCATACAAGTCAA+GGG | + | chr2_1:14834766-14834785 | None:intergenic | 35.0% | |
| TTTCTCGCTGAACAGTAAAA+TGG | + | chr2_1:14834788-14834807 | None:intergenic | 35.0% | |
| ATTAACAAATCATGAGGGAC+AGG | + | chr2_1:14834830-14834849 | None:intergenic | 35.0% | |
| ! | CATACACTATTTCTCTTGTG+AGG | - | chr2_1:14834860-14834879 | Msa0197140:intron | 35.0% |
| TGTGACTGTATATGAAAGAC+AGG | + | chr2_1:14835186-14835205 | None:intergenic | 35.0% | |
| TTTGTGAGTTCATGAGTATG+CGG | - | chr2_1:14835212-14835231 | Msa0197140:intron | 35.0% | |
| ! | TCTAATTGATTTCATTCCCG+AGG | - | chr2_1:14835582-14835601 | Msa0197140:intron | 35.0% |
| TGCAGAACTCAATGAAATTC+TGG | - | chr2_1:14835753-14835772 | Msa0197140:CDS | 35.0% | |
| AATTGTTCTTGAATGGCTTG+AGG | + | chr2_1:14835856-14835875 | None:intergenic | 35.0% | |
| GAAATGGTTGAAACTGAGTT+GGG | - | chr2_1:14836040-14836059 | Msa0197140:intron | 35.0% | |
| AAATGGTTGAAACTGAGTTG+GGG | - | chr2_1:14836041-14836060 | Msa0197140:intron | 35.0% | |
| TATTGCTATGCTCTTGGTTA+TGG | - | chr2_1:14836407-14836426 | Msa0197140:intron | 35.0% | |
| CAAGACTGGACTAATATCAT+CGG | - | chr2_1:14836454-14836473 | Msa0197140:intron | 35.0% | |
| CTATGATACTTTGATCAGGT+TGG | - | chr2_1:14836585-14836604 | Msa0197140:intron | 35.0% | |
| TTACATGTTGGATTGTTCAG+GGG | - | chr2_1:14837118-14837137 | Msa0197140:intron | 35.0% | |
| ! | CAATGACGCAAACTTTTTGA+AGG | + | chr2_1:14837147-14837166 | None:intergenic | 35.0% |
| TCAAAAAGTTTGCGTCATTG+CGG | - | chr2_1:14837147-14837166 | Msa0197140:CDS | 35.0% | |
| GTAGGTCCAATTCAATTTAC+TGG | - | chr2_1:14837283-14837302 | Msa0197140:intron | 35.0% | |
| TCCAATTCAATTTACTGGAC+CGG | - | chr2_1:14837288-14837307 | Msa0197140:intron | 35.0% | |
| TTAGTCGTCCTCGTATTTAA+CGG | - | chr2_1:14837360-14837379 | Msa0197140:CDS | 35.0% | |
| TTACTGAGGTGATTTACACT+AGG | - | chr2_1:14837596-14837615 | Msa0197140:five_prime_UTR | 35.0% | |
| ! | ATGTTTGAAGTGACTTTGGA+TGG | + | chr2_1:14837645-14837664 | None:intergenic | 35.0% |
| ! | TGTTTTTCGCCATTGTATTG+TGG | - | chr2_1:14837683-14837702 | Msa0197140:five_prime_UTR | 35.0% |
| !! | TTTTGAAAGAAAGAGGGTGG+TGG | + | chr2_1:14831126-14831145 | None:intergenic | 40.0% |
| AGATTTACCTGGATTTCCAG+CGG | + | chr2_1:14831381-14831400 | None:intergenic | 40.0% | |
| TGTCGGTATCTTTATCGTGT+CGG | + | chr2_1:14831711-14831730 | None:intergenic | 40.0% | |
| TACCTTCAACAAAGTGCAAG+TGG | - | chr2_1:14831880-14831899 | Msa0197140:intron | 40.0% | |
| TTCCACTTGCACTTTGTTGA+AGG | + | chr2_1:14831885-14831904 | None:intergenic | 40.0% | |
| AGCACATTGTATGGCTTCAA+AGG | - | chr2_1:14831904-14831923 | Msa0197140:intron | 40.0% | |
| ACATTGTATGGCTTCAAAGG+TGG | - | chr2_1:14831907-14831926 | Msa0197140:intron | 40.0% | |
| ! | CATGTGGTGATCATTTTGCA+AGG | + | chr2_1:14832775-14832794 | None:intergenic | 40.0% |
| !! | GGTTTTGACATGATTTGCAG+TGG | - | chr2_1:14832839-14832858 | Msa0197140:intron | 40.0% |
| AACAGCAACAAAGCTAGACT+TGG | - | chr2_1:14832996-14833015 | Msa0197140:intron | 40.0% | |
| CAACAAAGCTAGACTTGGAT+GGG | - | chr2_1:14833001-14833020 | Msa0197140:intron | 40.0% | |
| !! | TTGGATGGGCTTGTTGTTAT+TGG | - | chr2_1:14833015-14833034 | Msa0197140:intron | 40.0% |
| AAAGAAGTTCCCACAAGCTT+TGG | - | chr2_1:14833380-14833399 | Msa0197140:intron | 40.0% | |
| AAGAAGTTCCCACAAGCTTT+GGG | - | chr2_1:14833381-14833400 | Msa0197140:intron | 40.0% | |
| GTATCAAACCCAAAGCTTGT+GGG | + | chr2_1:14833392-14833411 | None:intergenic | 40.0% | |
| AGTATCAAACCCAAAGCTTG+TGG | + | chr2_1:14833393-14833412 | None:intergenic | 40.0% | |
| TTGGGAAATATTCCTATCCC+AGG | - | chr2_1:14833725-14833744 | Msa0197140:intron | 40.0% | |
| GTAGAAAATGTTCCTGGGAT+AGG | + | chr2_1:14833740-14833759 | None:intergenic | 40.0% | |
| !! | CAGCTTTTCACTTTTACACG+TGG | - | chr2_1:14833882-14833901 | Msa0197140:intron | 40.0% |
| ! | ATTAGGATTCTTGAGAGCAC+TGG | - | chr2_1:14833927-14833946 | Msa0197140:intron | 40.0% |
| !! | TTAGGATTCTTGAGAGCACT+GGG | - | chr2_1:14833928-14833947 | Msa0197140:intron | 40.0% |
| AGCAGTTGGGAAAAATGCAT+TGG | + | chr2_1:14834155-14834174 | None:intergenic | 40.0% | |
| AATTGTATCATCTGACTGCC+CGG | - | chr2_1:14834530-14834549 | Msa0197140:intron | 40.0% | |
| AGAATAGAAAAGATGACCCC+GGG | + | chr2_1:14834551-14834570 | None:intergenic | 40.0% | |
| GGCTGATATCATACAAGTCA+AGG | + | chr2_1:14834767-14834786 | None:intergenic | 40.0% | |
| ! | TCATGGTTTGTGCTGTTGAA+TGG | - | chr2_1:14834928-14834947 | Msa0197140:intron | 40.0% |
| GCGTCAGTTACACATTATGA+AGG | + | chr2_1:14835071-14835090 | None:intergenic | 40.0% | |
| !! | ATCTGAAGCATCGTTTCTCT+TGG | + | chr2_1:14835093-14835112 | None:intergenic | 40.0% |
| CATGCCATTGTTCTATTTGC+AGG | - | chr2_1:14835717-14835736 | Msa0197140:CDS | 40.0% | |
| TGGACCTGCAAATAGAACAA+TGG | + | chr2_1:14835724-14835743 | None:intergenic | 40.0% | |
| TGAGTTCTGCAATAAGATGC+TGG | + | chr2_1:14835744-14835763 | None:intergenic | 40.0% | |
| GAAACTCACTGATCAGTCAT+TGG | - | chr2_1:14835813-14835832 | Msa0197140:intron | 40.0% | |
| ATGCTTGAAAGAGATCCACA+TGG | - | chr2_1:14835877-14835896 | Msa0197140:CDS | 40.0% | |
| AGATCCACATGGAAATGTTC+AGG | - | chr2_1:14835888-14835907 | Msa0197140:CDS | 40.0% | |
| !!! | CTGTTTCTATTTTGGCAACC+TGG | + | chr2_1:14836006-14836025 | None:intergenic | 40.0% |
| CGAAATGGTTGAAACTGAGT+TGG | - | chr2_1:14836039-14836058 | Msa0197140:intron | 40.0% | |
| !!! | AAAGGGCAGTCTCACTTTTT+CGG | - | chr2_1:14836100-14836119 | Msa0197140:intron | 40.0% |
| GCTAACTATTGCTATGCTCT+TGG | - | chr2_1:14836401-14836420 | Msa0197140:intron | 40.0% | |
| ATTCAAGCCTGTGATCAAGA+AGG | - | chr2_1:14836987-14837006 | Msa0197140:intron | 40.0% | |
| CAAAAAGTTTGCGTCATTGC+GGG | - | chr2_1:14837148-14837167 | Msa0197140:CDS | 40.0% | |
| ACTGGTGTAGCAATTCTTCA+GGG | + | chr2_1:14837183-14837202 | None:intergenic | 40.0% | |
| AAAACAAGCGAGTACAAACC+TGG | + | chr2_1:14837206-14837225 | None:intergenic | 40.0% | |
| ! | TGTCACGGTGTTTTCATTGT+AGG | - | chr2_1:14837265-14837284 | Msa0197140:CDS | 40.0% |
| CCAATTCAATTTACTGGACC+GGG | - | chr2_1:14837289-14837308 | Msa0197140:intron | 40.0% | |
| AGTTAGTCACACTCTACTCT+TGG | - | chr2_1:14837321-14837340 | Msa0197140:intron | 40.0% | |
| AATTGCCACCGTTAAATACG+AGG | + | chr2_1:14837371-14837390 | None:intergenic | 40.0% | |
| !! | ACGGTGGCAATTCATTTTTG+TGG | - | chr2_1:14837379-14837398 | Msa0197140:CDS | 40.0% |
| !! | CGGTGGCAATTCATTTTTGT+GGG | - | chr2_1:14837380-14837399 | Msa0197140:CDS | 40.0% |
| TTGAAGTGACTTTGGATGGT+GGG | + | chr2_1:14837641-14837660 | None:intergenic | 40.0% | |
| ! | TTTGAAGTGACTTTGGATGG+TGG | + | chr2_1:14837642-14837661 | None:intergenic | 40.0% |
| CCAGCTGCAATCGTAACTAA+CGG | - | chr2_1:14831215-14831234 | Msa0197140:three_prime_UTR | 45.0% | |
| !! | GTTTTGGACTTCGCTGTAGA+CGG | + | chr2_1:14831279-14831298 | None:intergenic | 45.0% |
| ! | GGATTTAGGACCATCGACAA+TGG | + | chr2_1:14831354-14831373 | None:intergenic | 45.0% |
| ATGAACGGCGAAGATTTACC+TGG | + | chr2_1:14831392-14831411 | None:intergenic | 45.0% | |
| ACTTCGATCTGCACTTGATC+TGG | - | chr2_1:14831419-14831438 | Msa0197140:CDS | 45.0% | |
| CCTCATCGGAAGTTGAAGAT+CGG | - | chr2_1:14831548-14831567 | Msa0197140:CDS | 45.0% | |
| !!! | ATCGGTGTTGTTTTATCCGG+TGG | - | chr2_1:14831566-14831585 | Msa0197140:CDS | 45.0% |
| !!! | TGTTGTTTTATCCGGTGGTC+AGG | - | chr2_1:14831571-14831590 | Msa0197140:CDS | 45.0% |
| !! | CTCTGGAATTTACGGTAACG+CGG | - | chr2_1:14831616-14831635 | Msa0197140:intron | 45.0% |
| ! | TATCGTGTCGGTGTAATGTC+CGG | + | chr2_1:14831699-14831718 | None:intergenic | 45.0% |
| ! | GCAAGTGGAAGCACATTGTA+TGG | - | chr2_1:14831895-14831914 | Msa0197140:intron | 45.0% |
| TGGTCCTGCTGGTATTATGA+AGG | - | chr2_1:14831927-14831946 | Msa0197140:intron | 45.0% | |
| GGTCCTGCTGGTATTATGAA+GGG | - | chr2_1:14831928-14831947 | Msa0197140:intron | 45.0% | |
| TTGCCCTTCATAATACCAGC+AGG | + | chr2_1:14831934-14831953 | None:intergenic | 45.0% | |
| ! | TTGACATGATTTGCAGTGGG+AGG | - | chr2_1:14832843-14832862 | Msa0197140:CDS | 45.0% |
| ! | TGACATGATTTGCAGTGGGA+GGG | - | chr2_1:14832844-14832863 | Msa0197140:CDS | 45.0% |
| CAAGATTGAAACTCCAGAGC+AGG | - | chr2_1:14832868-14832887 | Msa0197140:CDS | 45.0% | |
| TTGAAACTCCAGAGCAGGTA+CGG | - | chr2_1:14832873-14832892 | Msa0197140:CDS | 45.0% | |
| GCAACAAAGCTAGACTTGGA+TGG | - | chr2_1:14833000-14833019 | Msa0197140:intron | 45.0% | |
| !! | GATGGGCTTGTTGTTATTGG+TGG | - | chr2_1:14833018-14833037 | Msa0197140:intron | 45.0% |
| CAAACCTGAAGTTCTCAGCA+AGG | + | chr2_1:14833071-14833090 | None:intergenic | 45.0% | |
| GGATGCCCTAAAACCATTGA+TGG | - | chr2_1:14833344-14833363 | Msa0197140:intron | 45.0% | |
| TGGGTTTGATACTGCTTGCA+AGG | - | chr2_1:14833400-14833419 | Msa0197140:CDS | 45.0% | |
| GATACTGCTTGCAAGGTGAA+TGG | - | chr2_1:14833407-14833426 | Msa0197140:CDS | 45.0% | |
| GCACAATGAAGTCTGCAATG+TGG | + | chr2_1:14833437-14833456 | None:intergenic | 45.0% | |
| AACAGCCCCTTGCAAATTAC+AGG | + | chr2_1:14833526-14833545 | None:intergenic | 45.0% | |
| TTCCCGGGAACCTTTATAAC+AGG | - | chr2_1:14833634-14833653 | Msa0197140:intron | 45.0% | |
| TCCCGGGAACCTTTATAACA+GGG | - | chr2_1:14833635-14833654 | Msa0197140:intron | 45.0% | |
| TCCCTGTTATAAAGGTTCCC+GGG | + | chr2_1:14833639-14833658 | None:intergenic | 45.0% | |
| CTCCCTGTTATAAAGGTTCC+CGG | + | chr2_1:14833640-14833659 | None:intergenic | 45.0% | |
| CCTGGGTAGAAAATGTTCCT+GGG | + | chr2_1:14833745-14833764 | None:intergenic | 45.0% | |
| TCCTGGGTAGAAAATGTTCC+TGG | + | chr2_1:14833746-14833765 | None:intergenic | 45.0% | |
| TTGACACAAACACACCCCAA+AGG | - | chr2_1:14833844-14833863 | Msa0197140:intron | 45.0% | |
| ATGATAGATGCCCGATCAAC+CGG | - | chr2_1:14834270-14834289 | Msa0197140:intron | 45.0% | |
| ! | GCTTGTTGCTTCTTGCATCA+TGG | - | chr2_1:14834453-14834472 | Msa0197140:CDS | 45.0% |
| ATTGTATCATCTGACTGCCC+GGG | - | chr2_1:14834531-14834550 | Msa0197140:intron | 45.0% | |
| ATACAAGTCAAGGGGTGAAC+CGG | + | chr2_1:14834757-14834776 | None:intergenic | 45.0% | |
| GACAGGATGATGTATGAGCA+AGG | + | chr2_1:14834813-14834832 | None:intergenic | 45.0% | |
| !! | CAATTCATATGGCGGACATC+AGG | - | chr2_1:14835116-14835135 | Msa0197140:intron | 45.0% |
| ATGAAAGACAGGCACAGAGA+GGG | + | chr2_1:14835175-14835194 | None:intergenic | 45.0% | |
| TATGAAAGACAGGCACAGAG+AGG | + | chr2_1:14835176-14835195 | None:intergenic | 45.0% | |
| TGAGTTCATGAGTATGCGGT+TGG | - | chr2_1:14835216-14835235 | Msa0197140:intron | 45.0% | |
| GAGTTCATGAGTATGCGGTT+GGG | - | chr2_1:14835217-14835236 | Msa0197140:intron | 45.0% | |
| ATCATCTGTCTGCAGTTGTG+CGG | - | chr2_1:14835260-14835279 | Msa0197140:intron | 45.0% | |
| TGCAGCTTCACACATTACAC+TGG | - | chr2_1:14835294-14835313 | Msa0197140:intron | 45.0% | |
| GCTCATGAAACCGTAGATGA+GGG | - | chr2_1:14835775-14835794 | Msa0197140:intron | 45.0% | |
| GGTACCTGAACATTTCCATG+TGG | + | chr2_1:14835895-14835914 | None:intergenic | 45.0% | |
| TTGGGGAAGAGAAAGCAAGA+AGG | - | chr2_1:14836058-14836077 | Msa0197140:intron | 45.0% | |
| !!! | AAGGGCAGTCTCACTTTTTC+GGG | - | chr2_1:14836101-14836120 | Msa0197140:intron | 45.0% |
| TCTGGCAAAGGAAGTCAAAC+TGG | + | chr2_1:14836315-14836334 | None:intergenic | 45.0% | |
| ! | GTAACTACAAGCTCTGGCAA+AGG | + | chr2_1:14836327-14836346 | None:intergenic | 45.0% |
| TCAAGGGTAACTACAAGCTC+TGG | + | chr2_1:14836333-14836352 | None:intergenic | 45.0% | |
| TGCAGTTATGAAGGGAGATG+CGG | - | chr2_1:14836359-14836378 | Msa0197140:intron | 45.0% | |
| TATGCTCTTGGTTATGGTGC+TGG | - | chr2_1:14836413-14836432 | Msa0197140:intron | 45.0% | |
| ACCATTGCCTTCTTGATCAC+AGG | + | chr2_1:14836997-14837016 | None:intergenic | 45.0% | |
| TGTGATCAAGAAGGCAATGG+TGG | - | chr2_1:14836996-14837015 | Msa0197140:intron | 45.0% | |
| ACTCACTACTTTAGTGGAGC+TGG | + | chr2_1:14837072-14837091 | None:intergenic | 45.0% | |
| GACTGGTGTAGCAATTCTTC+AGG | + | chr2_1:14837184-14837203 | None:intergenic | 45.0% | |
| AAGAATTGCTACACCAGTCC+AGG | - | chr2_1:14837185-14837204 | Msa0197140:CDS | 45.0% | |
| GTTCAGCTGTCAACTTGTCA+CGG | - | chr2_1:14837250-14837269 | Msa0197140:CDS | 45.0% | |
| CCCGGTCCAGTAAATTGAAT+TGG | + | chr2_1:14837292-14837311 | None:intergenic | 45.0% | |
| TGACTAACTGCATCAGATCC+CGG | + | chr2_1:14837310-14837329 | None:intergenic | 45.0% | |
| CACACTCTACTCTTGGAATC+TGG | - | chr2_1:14837328-14837347 | Msa0197140:intron | 45.0% | |
| !! | TTTTCCAGCTGGTTCATGAG+TGG | - | chr2_1:14837465-14837484 | Msa0197140:CDS | 45.0% |
| ! | TTTCCAGCTGGTTCATGAGT+GGG | - | chr2_1:14837466-14837485 | Msa0197140:CDS | 45.0% |
| ! | GTGGTGGTGAGTGAGAAAGT+AGG | + | chr2_1:14831110-14831129 | None:intergenic | 50.0% |
| CCGTTAGTTACGATTGCAGC+TGG | + | chr2_1:14831218-14831237 | None:intergenic | 50.0% | |
| ! | TGTGATCGACACGGCTGTTT+TGG | + | chr2_1:14831295-14831314 | None:intergenic | 50.0% |
| GACGGAGTTTGTGATCGACA+CGG | + | chr2_1:14831304-14831323 | None:intergenic | 50.0% | |
| ATTGGAGAACGGAGGGAAGA+CGG | + | chr2_1:14831322-14831341 | None:intergenic | 50.0% | |
| AACGGTGATTGGAGAACGGA+GGG | + | chr2_1:14831329-14831348 | None:intergenic | 50.0% | |
| TTTACCTGGATTTCCAGCGG+CGG | + | chr2_1:14831378-14831397 | None:intergenic | 50.0% | |
| CCGATCTTCAACTTCCGATG+AGG | + | chr2_1:14831551-14831570 | None:intergenic | 50.0% | |
| GAGATGACATTGTGTCCACC+AGG | + | chr2_1:14831599-14831618 | None:intergenic | 50.0% | |
| GGTGGACACAATGTCATCTC+TGG | - | chr2_1:14831599-14831618 | Msa0197140:intron | 50.0% | |
| TGAAACTCCAGAGCAGGTAC+GGG | - | chr2_1:14832874-14832893 | Msa0197140:CDS | 50.0% | |
| ACCTGAAGTTCTCAGCAAGG+AGG | + | chr2_1:14833068-14833087 | None:intergenic | 50.0% | |
| CGGGAACCTTTATAACAGGG+AGG | - | chr2_1:14833638-14833657 | Msa0197140:intron | 50.0% | |
| ! | CCCAGGAACATTTTCTACCC+AGG | - | chr2_1:14833742-14833761 | Msa0197140:intron | 50.0% |
| !! | ATTCTTGAGAGCACTGGGAC+TGG | - | chr2_1:14833933-14833952 | Msa0197140:intron | 50.0% |
| !! | TTCTTGAGAGCACTGGGACT+GGG | - | chr2_1:14833934-14833953 | Msa0197140:intron | 50.0% |
| TTGTATCATCTGACTGCCCG+GGG | - | chr2_1:14834532-14834551 | Msa0197140:intron | 50.0% | |
| TCTGCAGTTGTGCGGCTTAT+GGG | - | chr2_1:14835268-14835287 | Msa0197140:intron | 50.0% | |
| GGGGTCATTCTTATCCCTGA+AGG | - | chr2_1:14835559-14835578 | Msa0197140:intron | 50.0% | |
| AGAGAGTGATAGACGCACCT+CGG | + | chr2_1:14835602-14835621 | None:intergenic | 50.0% | |
| GGCTCATGAAACCGTAGATG+AGG | - | chr2_1:14835774-14835793 | Msa0197140:intron | 50.0% | |
| CATGAAACCGTAGATGAGGG+TGG | - | chr2_1:14835778-14835797 | Msa0197140:intron | 50.0% | |
| CCACAAACCACCCTCATCTA+CGG | + | chr2_1:14835788-14835807 | None:intergenic | 50.0% | |
| AGTCTTGCCGCTATGAAGGA+GGG | + | chr2_1:14836441-14836460 | None:intergenic | 50.0% | |
| TGTGTGCTCCAGTAGAAGAG+TGG | - | chr2_1:14836613-14836632 | Msa0197140:intron | 50.0% | |
| CCAACTGTCCACTCTTCTAC+TGG | + | chr2_1:14836624-14836643 | None:intergenic | 50.0% | |
| CCAGTAGAAGAGTGGACAGT+TGG | - | chr2_1:14836621-14836640 | Msa0197140:intron | 50.0% | |
| GTAGAAGAGTGGACAGTTGG+TGG | - | chr2_1:14836624-14836643 | Msa0197140:intron | 50.0% | |
| AACTGCACTCACCTCACTGA+TGG | - | chr2_1:14836647-14836666 | Msa0197140:intron | 50.0% | |
| GCCTGTGATCAAGAAGGCAA+TGG | - | chr2_1:14836993-14837012 | Msa0197140:intron | 50.0% | |
| ! | AAGGCAATGGTGGAGCTTGA+AGG | - | chr2_1:14837006-14837025 | Msa0197140:intron | 50.0% |
| TTGCGTCATTGCGGGATGAA+TGG | - | chr2_1:14837156-14837175 | Msa0197140:CDS | 50.0% | |
| TGCGTCATTGCGGGATGAAT+GGG | - | chr2_1:14837157-14837176 | Msa0197140:CDS | 50.0% | |
| AAGCGAGTACAAACCTGGAC+TGG | + | chr2_1:14837201-14837220 | None:intergenic | 50.0% | |
| GTCGTCCTCGTATTTAACGG+TGG | - | chr2_1:14837363-14837382 | Msa0197140:CDS | 50.0% | |
| TGTTGTGACGGTAGGTGTGG+CGG | + | chr2_1:14831246-14831265 | None:intergenic | 55.0% | |
| TTGGACTTCGCTGTAGACGG+AGG | + | chr2_1:14831276-14831295 | None:intergenic | 55.0% | |
| GAACGGTGATTGGAGAACGG+AGG | + | chr2_1:14831330-14831349 | None:intergenic | 55.0% | |
| GGCGAACGGTGATTGGAGAA+CGG | + | chr2_1:14831333-14831352 | None:intergenic | 55.0% | |
| CGACAATGGCGAACGGTGAT+TGG | + | chr2_1:14831340-14831359 | None:intergenic | 55.0% | |
| TCACCGTTCGCCATTGTCGA+TGG | - | chr2_1:14831341-14831360 | Msa0197140:three_prime_UTR | 55.0% | |
| GGACCATCGACAATGGCGAA+CGG | + | chr2_1:14831347-14831366 | None:intergenic | 55.0% | |
| TTTCCAGCGGCGGAGGATTT+AGG | + | chr2_1:14831368-14831387 | None:intergenic | 55.0% | |
| GCAGGCACTAAAGCAGCAGA+AGG | + | chr2_1:14831509-14831528 | None:intergenic | 55.0% | |
| !! | TCTGCTGCTTTAGTGCCTGC+TGG | - | chr2_1:14831509-14831528 | Msa0197140:intron | 55.0% |
| AGAACACCGCGCTTCCTCAT+CGG | - | chr2_1:14831534-14831553 | Msa0197140:intron | 55.0% | |
| CAACTTCCGATGAGGAAGCG+CGG | + | chr2_1:14831543-14831562 | None:intergenic | 55.0% | |
| CAGGTACGGGTCATGTCATG+AGG | - | chr2_1:14832887-14832906 | Msa0197140:CDS | 55.0% | |
| ! | CTCAGCAAGGAGGCATGCAT+TGG | + | chr2_1:14833058-14833077 | None:intergenic | 55.0% |
| GCCTCCTTGCTGAGAACTTC+AGG | - | chr2_1:14833064-14833083 | Msa0197140:intron | 55.0% | |
| AGGGAGAGGGGGCAATTAGA+TGG | + | chr2_1:14835156-14835175 | None:intergenic | 55.0% | |
| GTCTGCAGTTGTGCGGCTTA+TGG | - | chr2_1:14835267-14835286 | Msa0197140:intron | 55.0% | |
| CTGCAGTTGTGCGGCTTATG+GGG | - | chr2_1:14835269-14835288 | Msa0197140:intron | 55.0% | |
| GAGAGTGATAGACGCACCTC+GGG | + | chr2_1:14835601-14835620 | None:intergenic | 55.0% | |
| CCGTAGATGAGGGTGGTTTG+TGG | - | chr2_1:14835785-14835804 | Msa0197140:intron | 55.0% | |
| CAGTCTTGCCGCTATGAAGG+AGG | + | chr2_1:14836442-14836461 | None:intergenic | 55.0% | |
| CTCCTTCATAGCGGCAAGAC+TGG | - | chr2_1:14836440-14836459 | Msa0197140:intron | 55.0% | |
| GTCCAGTCTTGCCGCTATGA+AGG | + | chr2_1:14836445-14836464 | None:intergenic | 55.0% | |
| ! | ACTCACCTCACTGATGGACG+TGG | - | chr2_1:14836653-14836672 | Msa0197140:intron | 55.0% |
| ATGGACGTGGAGAGGAGACA+TGG | - | chr2_1:14836666-14836685 | Msa0197140:intron | 55.0% | |
| CAACCCACTCATGAACCAGC+TGG | + | chr2_1:14837472-14837491 | None:intergenic | 55.0% | |
| GCGTGTTGTGACGGTAGGTG+TGG | + | chr2_1:14831249-14831268 | None:intergenic | 60.0% | |
| GCGAAGCGTGTTGTGACGGT+AGG | + | chr2_1:14831254-14831273 | None:intergenic | 60.0% | |
| GGAGGCGAAGCGTGTTGTGA+CGG | + | chr2_1:14831258-14831277 | None:intergenic | 60.0% | |
| TTATCCGGTGGTCAGGCTCC+TGG | - | chr2_1:14831578-14831597 | Msa0197140:CDS | 60.0% | |
| GGCTTCAAAGGTGGTCCTGC+TGG | - | chr2_1:14831916-14831935 | Msa0197140:intron | 60.0% | |
| GACATGACCCGTACCTGCTC+TGG | + | chr2_1:14832884-14832903 | None:intergenic | 60.0% | |
| ACAGGCACAGAGAGGGAGAG+GGG | + | chr2_1:14835168-14835187 | None:intergenic | 60.0% | |
| GACAGGCACAGAGAGGGAGA+GGG | + | chr2_1:14835169-14835188 | None:intergenic | 60.0% | |
| AGACAGGCACAGAGAGGGAG+AGG | + | chr2_1:14835170-14835189 | None:intergenic | 60.0% | |
| GCTGGAGCCCTCCTTCATAG+CGG | - | chr2_1:14836431-14836450 | Msa0197140:intron | 60.0% | |
| CCTCTCCACGTCCATCAGTG+AGG | + | chr2_1:14836661-14836680 | None:intergenic | 60.0% | |
| ! | CCTCACTGATGGACGTGGAG+AGG | - | chr2_1:14836658-14836677 | Msa0197140:intron | 60.0% |
| TGTGACGGTAGGTGTGGCGG+TGG | + | chr2_1:14831243-14831262 | None:intergenic | 65.0% | |
| GGTCCTAAATCCTCCGCCGC+TGG | - | chr2_1:14831362-14831381 | Msa0197140:three_prime_UTR | 65.0% | |
| TCCTCCGCCGCTGGAAATCC+AGG | - | chr2_1:14831371-14831390 | Msa0197140:exon | 65.0% | |
| ACCTGGATTTCCAGCGGCGG+AGG | + | chr2_1:14831375-14831394 | None:intergenic | 65.0% | |
| AGCGCGGTGTTCTCACCAGC+AGG | + | chr2_1:14831527-14831546 | None:intergenic | 65.0% | |
| TCCACCAGGAGCCTGACCAC+CGG | + | chr2_1:14831585-14831604 | None:intergenic | 65.0% | |
| CAGGCACAGAGAGGGAGAGG+GGG | + | chr2_1:14835167-14835186 | None:intergenic | 65.0% | |
| TCCGGTGGTCAGGCTCCTGG+TGG | - | chr2_1:14831581-14831600 | Msa0197140:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 14831032 | 14837720 | 14831032 | ID=Msa0197140;Name=Msa0197140 |
| chr2_1 | mRNA | 14831032 | 14837720 | 14831032 | ID=Msa0197140-mRNA-1;Parent=Msa0197140;Name=Msa0197140-mRNA-1;_AED=0.09;_eAED=0.09;_QI=177|1|1|1|1|1|16|357|564 |
| chr2_1 | exon | 14831032 | 14831465 | 14831032 | ID=Msa0197140-mRNA-1:exon:6312;Parent=Msa0197140-mRNA-1 |
| chr2_1 | exon | 14831546 | 14831614 | 14831546 | ID=Msa0197140-mRNA-1:exon:6311;Parent=Msa0197140-mRNA-1 |
| chr2_1 | exon | 14831725 | 14831769 | 14831725 | ID=Msa0197140-mRNA-1:exon:6310;Parent=Msa0197140-mRNA-1 |
| chr2_1 | exon | 14832065 | 14832149 | 14832065 | ID=Msa0197140-mRNA-1:exon:6309;Parent=Msa0197140-mRNA-1 |
| chr2_1 | exon | 14832277 | 14832388 | 14832277 | ID=Msa0197140-mRNA-1:exon:6308;Parent=Msa0197140-mRNA-1 |
| chr2_1 | exon | 14832630 | 14832745 | 14832630 | ID=Msa0197140-mRNA-1:exon:6307;Parent=Msa0197140-mRNA-1 |
| chr2_1 | exon | 14832843 | 14833013 | 14832843 | ID=Msa0197140-mRNA-1:exon:6306;Parent=Msa0197140-mRNA-1 |
| chr2_1 | exon | 14833149 | 14833280 | 14833149 | ID=Msa0197140-mRNA-1:exon:6305;Parent=Msa0197140-mRNA-1 |
| chr2_1 | exon | 14833389 | 14833477 | 14833389 | ID=Msa0197140-mRNA-1:exon:6304;Parent=Msa0197140-mRNA-1 |
| chr2_1 | exon | 14834446 | 14834509 | 14834446 | ID=Msa0197140-mRNA-1:exon:6303;Parent=Msa0197140-mRNA-1 |
| chr2_1 | exon | 14835331 | 14835436 | 14835331 | ID=Msa0197140-mRNA-1:exon:6302;Parent=Msa0197140-mRNA-1 |
| chr2_1 | exon | 14835667 | 14835773 | 14835667 | ID=Msa0197140-mRNA-1:exon:6301;Parent=Msa0197140-mRNA-1 |
| chr2_1 | exon | 14835863 | 14835916 | 14835863 | ID=Msa0197140-mRNA-1:exon:6300;Parent=Msa0197140-mRNA-1 |
| chr2_1 | exon | 14836753 | 14836874 | 14836753 | ID=Msa0197140-mRNA-1:exon:6299;Parent=Msa0197140-mRNA-1 |
| chr2_1 | exon | 14837123 | 14837284 | 14837123 | ID=Msa0197140-mRNA-1:exon:6298;Parent=Msa0197140-mRNA-1 |
| chr2_1 | exon | 14837360 | 14837720 | 14837360 | ID=Msa0197140-mRNA-1:exon:6297;Parent=Msa0197140-mRNA-1 |
| chr2_1 | five_prime_UTR | 14837544 | 14837720 | 14837544 | ID=Msa0197140-mRNA-1:five_prime_utr;Parent=Msa0197140-mRNA-1 |
| chr2_1 | CDS | 14837360 | 14837543 | 14837360 | ID=Msa0197140-mRNA-1:cds;Parent=Msa0197140-mRNA-1 |
| chr2_1 | CDS | 14837123 | 14837284 | 14837123 | ID=Msa0197140-mRNA-1:cds;Parent=Msa0197140-mRNA-1 |
| chr2_1 | CDS | 14836753 | 14836874 | 14836753 | ID=Msa0197140-mRNA-1:cds;Parent=Msa0197140-mRNA-1 |
| chr2_1 | CDS | 14835863 | 14835916 | 14835863 | ID=Msa0197140-mRNA-1:cds;Parent=Msa0197140-mRNA-1 |
| chr2_1 | CDS | 14835667 | 14835773 | 14835667 | ID=Msa0197140-mRNA-1:cds;Parent=Msa0197140-mRNA-1 |
| chr2_1 | CDS | 14835331 | 14835436 | 14835331 | ID=Msa0197140-mRNA-1:cds;Parent=Msa0197140-mRNA-1 |
| chr2_1 | CDS | 14834446 | 14834509 | 14834446 | ID=Msa0197140-mRNA-1:cds;Parent=Msa0197140-mRNA-1 |
| chr2_1 | CDS | 14833389 | 14833477 | 14833389 | ID=Msa0197140-mRNA-1:cds;Parent=Msa0197140-mRNA-1 |
| chr2_1 | CDS | 14833149 | 14833280 | 14833149 | ID=Msa0197140-mRNA-1:cds;Parent=Msa0197140-mRNA-1 |
| chr2_1 | CDS | 14832843 | 14833013 | 14832843 | ID=Msa0197140-mRNA-1:cds;Parent=Msa0197140-mRNA-1 |
| chr2_1 | CDS | 14832630 | 14832745 | 14832630 | ID=Msa0197140-mRNA-1:cds;Parent=Msa0197140-mRNA-1 |
| chr2_1 | CDS | 14832277 | 14832388 | 14832277 | ID=Msa0197140-mRNA-1:cds;Parent=Msa0197140-mRNA-1 |
| chr2_1 | CDS | 14832065 | 14832149 | 14832065 | ID=Msa0197140-mRNA-1:cds;Parent=Msa0197140-mRNA-1 |
| chr2_1 | CDS | 14831725 | 14831769 | 14831725 | ID=Msa0197140-mRNA-1:cds;Parent=Msa0197140-mRNA-1 |
| chr2_1 | CDS | 14831546 | 14831614 | 14831546 | ID=Msa0197140-mRNA-1:cds;Parent=Msa0197140-mRNA-1 |
| chr2_1 | CDS | 14831389 | 14831465 | 14831389 | ID=Msa0197140-mRNA-1:cds;Parent=Msa0197140-mRNA-1 |
| chr2_1 | three_prime_UTR | 14831032 | 14831388 | 14831032 | ID=Msa0197140-mRNA-1:three_prime_utr;Parent=Msa0197140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
