Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0240540 | XP_013463000.1 | 97.494 | 439 | 10 | 1 | 1 | 438 | 1 | 439 | 0.0 | 862 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0240540 | sp|Q9SV43|PLP7_ARATH | 48.519 | 439 | 197 | 7 | 2 | 413 | 31 | 467 | 2.21e-134 | 398 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0240540 | A0A072VFU2 | 97.494 | 439 | 10 | 1 | 1 | 438 | 1 | 439 | 0.0 | 862 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001800 | Msa0240540 | 0.858102 | 1.037085e-62 | -8.615850e-47 |
Msa0013270 | Msa0240540 | 0.830390 | 3.017693e-55 | -8.615850e-47 |
Msa0027800 | Msa0240540 | 0.807118 | 5.910199e-50 | -8.615850e-47 |
Msa0035730 | Msa0240540 | 0.803973 | 2.699106e-49 | -8.615850e-47 |
Msa0036810 | Msa0240540 | 0.836671 | 8.161250e-57 | -8.615850e-47 |
Msa0045620 | Msa0240540 | 0.812104 | 5.014022e-51 | -8.615850e-47 |
Msa0045810 | Msa0240540 | 0.814965 | 1.177542e-51 | -8.615850e-47 |
Msa0046200 | Msa0240540 | 0.805561 | 1.257654e-49 | -8.615850e-47 |
Msa0062190 | Msa0240540 | 0.811256 | 7.667156e-51 | -8.615850e-47 |
Msa0078130 | Msa0240540 | 0.805433 | 1.337958e-49 | -8.615850e-47 |
Msa0100890 | Msa0240540 | 0.804301 | 2.307096e-49 | -8.615850e-47 |
Msa0106540 | Msa0240540 | 0.820824 | 5.593769e-53 | -8.615850e-47 |
Msa0139500 | Msa0240540 | 0.804413 | 2.186725e-49 | -8.615850e-47 |
Msa0143590 | Msa0240540 | 0.812966 | 3.249828e-51 | -8.615850e-47 |
Msa0160380 | Msa0240540 | 0.810709 | 1.007200e-50 | -8.615850e-47 |
Msa0164170 | Msa0240540 | 0.811736 | 6.029580e-51 | -8.615850e-47 |
Msa0168380 | Msa0240540 | 0.812744 | 3.633358e-51 | -8.615850e-47 |
Msa0173250 | Msa0240540 | 0.826975 | 2.019591e-54 | -8.615850e-47 |
Msa0195230 | Msa0240540 | 0.893032 | 9.161778e-75 | -8.615850e-47 |
Msa0195260 | Msa0240540 | 0.894965 | 1.499838e-75 | -8.615850e-47 |
Msa0197140 | Msa0240540 | 0.834036 | 3.779821e-56 | -8.615850e-47 |
Msa0203080 | Msa0240540 | 0.832346 | 9.963224e-56 | -8.615850e-47 |
Msa0206370 | Msa0240540 | 0.815378 | 9.533456e-52 | -8.615850e-47 |
Msa0211460 | Msa0240540 | 0.835019 | 2.141083e-56 | -8.615850e-47 |
Msa0234170 | Msa0240540 | 0.813806 | 2.124445e-51 | -8.615850e-47 |
Msa0240540 | Msa0260980 | 0.813021 | 3.159744e-51 | -8.615850e-47 |
Msa0240540 | Msa0276800 | -0.811122 | 8.200193e-51 | -8.615850e-47 |
Msa0240540 | Msa0276850 | 0.839276 | 1.745497e-57 | -8.615850e-47 |
Msa0240540 | Msa0276860 | 0.837913 | 3.925225e-57 | -8.615850e-47 |
Msa0240540 | Msa0279000 | 0.918459 | 1.518469e-86 | -8.615850e-47 |
Msa0240540 | Msa0290800 | 0.805055 | 1.605711e-49 | -8.615850e-47 |
Msa0240540 | Msa0300670 | -0.808856 | 2.522096e-50 | -8.615850e-47 |
Msa0240540 | Msa0307430 | 0.809573 | 1.769581e-50 | -8.615850e-47 |
Msa0240540 | Msa0316000 | 0.805408 | 1.354059e-49 | -8.615850e-47 |
Msa0240540 | Msa0316720 | -0.802947 | 4.405494e-49 | -8.615850e-47 |
Msa0240540 | Msa0318410 | 0.915463 | 5.715537e-85 | -8.615850e-47 |
Msa0240540 | Msa0326710 | 0.800587 | 1.343571e-48 | -8.615850e-47 |
Msa0240540 | Msa0328870 | 0.821366 | 4.195334e-53 | -8.615850e-47 |
Msa0240540 | Msa0349930 | 0.806697 | 7.253258e-50 | -8.615850e-47 |
Msa0240540 | Msa0354840 | 0.803153 | 3.994076e-49 | -8.615850e-47 |
Msa0240540 | Msa0369040 | 0.812963 | 3.253962e-51 | -8.615850e-47 |
Msa0240540 | Msa0386560 | 0.804969 | 1.673228e-49 | -8.615850e-47 |
Msa0240540 | Msa0386880 | 0.807445 | 5.037958e-50 | -8.615850e-47 |
Msa0240540 | Msa0402770 | 0.823254 | 1.529218e-53 | -8.615850e-47 |
Msa0240540 | Msa0413170 | 0.812687 | 3.739221e-51 | -8.615850e-47 |
Msa0240540 | Msa0418100 | 0.802376 | 5.777217e-49 | -8.615850e-47 |
Msa0240540 | Msa0427420 | 0.839293 | 1.728505e-57 | -8.615850e-47 |
Msa0240540 | Msa0427480 | 0.837993 | 3.745087e-57 | -8.615850e-47 |
Msa0240540 | Msa0433630 | 0.805478 | 1.309266e-49 | -8.615850e-47 |
Msa0240540 | Msa0436100 | 0.810985 | 8.776112e-51 | -8.615850e-47 |
Msa0240540 | Msa0458100 | 0.810194 | 1.301357e-50 | -8.615850e-47 |
Msa0240540 | Msa0468390 | 0.812907 | 3.348122e-51 | -8.615850e-47 |
Msa0240540 | Msa0473910 | 0.803761 | 2.988193e-49 | -8.615850e-47 |
Msa0240540 | Msa0481670 | 0.811121 | 8.202493e-51 | -8.615850e-47 |
Msa0240540 | Msa0506750 | 0.809919 | 1.491633e-50 | -8.615850e-47 |
Msa0240540 | Msa0518320 | 0.803379 | 3.585913e-49 | -8.615850e-47 |
Msa0240540 | Msa0521510 | 0.801949 | 7.072034e-49 | -8.615850e-47 |
Msa0240540 | Msa0523550 | 0.805695 | 1.179095e-49 | -8.615850e-47 |
Msa0240540 | Msa0525880 | 0.803831 | 2.889325e-49 | -8.615850e-47 |
Msa0240540 | Msa0555280 | 0.801334 | 9.454672e-49 | -8.615850e-47 |
Msa0240540 | Msa0567330 | 0.836395 | 9.593962e-57 | -8.615850e-47 |
Msa0240540 | Msa0567570 | 0.834345 | 3.163103e-56 | -8.615850e-47 |
Msa0240540 | Msa0567610 | 0.810856 | 9.362373e-51 | -8.615850e-47 |
Msa0240540 | Msa0574900 | 0.834186 | 3.466708e-56 | -8.615850e-47 |
Msa0240540 | Msa0576320 | 0.841804 | 3.804592e-58 | -8.615850e-47 |
Msa0240540 | Msa0586200 | 0.800794 | 1.219247e-48 | -8.615850e-47 |
Msa0240540 | Msa0590000 | 0.808333 | 3.261338e-50 | -8.615850e-47 |
Msa0240540 | Msa0605530 | 0.859981 | 2.837863e-63 | -8.615850e-47 |
Msa0240540 | Msa0608820 | 0.808180 | 3.514633e-50 | -8.615850e-47 |
Msa0240540 | Msa0618840 | 0.816916 | 4.321550e-52 | -8.615850e-47 |
Msa0240540 | Msa0618990 | 0.812290 | 4.566068e-51 | -8.615850e-47 |
Msa0240540 | Msa0623310 | 0.809879 | 1.521446e-50 | -8.615850e-47 |
Msa0240540 | Msa0630440 | 0.823701 | 1.202002e-53 | -8.615850e-47 |
Msa0240540 | Msa0642550 | 0.808538 | 2.948425e-50 | -8.615850e-47 |
Msa0240540 | Msa0659020 | -0.807422 | 5.094055e-50 | -8.615850e-47 |
Msa0240540 | Msa0663290 | 0.820653 | 6.122963e-53 | -8.615850e-47 |
Msa0240540 | Msa0664070 | 0.816720 | 4.780435e-52 | -8.615850e-47 |
Msa0240540 | Msa0687370 | 0.800033 | 1.742136e-48 | -8.615850e-47 |
Msa0240540 | Msa0689830 | 0.845277 | 4.491018e-59 | -8.615850e-47 |
Msa0240540 | Msa0691610 | 0.807873 | 4.085984e-50 | -8.615850e-47 |
Msa0240540 | Msa0704690 | 0.813239 | 2.830744e-51 | -8.615850e-47 |
Msa0240540 | Msa0707360 | 0.816500 | 5.355960e-52 | -8.615850e-47 |
Msa0240540 | Msa0708980 | 0.804519 | 2.078077e-49 | -8.615850e-47 |
Msa0240540 | Msa0713080 | 0.821401 | 4.117438e-53 | -8.615850e-47 |
Msa0240540 | Msa0732970 | 0.828146 | 1.057074e-54 | -8.615850e-47 |
Msa0240540 | Msa0745140 | 0.820091 | 8.237949e-53 | -8.615850e-47 |
Msa0240540 | Msa0746650 | 0.828038 | 1.122520e-54 | -8.615850e-47 |
Msa0240540 | Msa0751720 | 0.801085 | 1.063190e-48 | -8.615850e-47 |
Msa0240540 | Msa0772220 | 0.811492 | 6.812867e-51 | -8.615850e-47 |
Msa0240540 | Msa0773960 | 0.846931 | 1.592998e-59 | -8.615850e-47 |
Msa0240540 | Msa0775660 | 0.821883 | 3.186710e-53 | -8.615850e-47 |
Msa0240540 | Msa0776640 | 0.821433 | 4.048304e-53 | -8.615850e-47 |
Msa0240540 | Msa0799450 | 0.811493 | 6.811378e-51 | -8.615850e-47 |
Msa0240540 | Msa0804170 | 0.823471 | 1.360990e-53 | -8.615850e-47 |
Msa0240540 | Msa0825920 | 0.821914 | 3.133074e-53 | -8.615850e-47 |
Msa0240540 | Msa0827370 | 0.801314 | 9.544931e-49 | -8.615850e-47 |
Msa0240540 | Msa0837680 | 0.810827 | 9.499930e-51 | -8.615850e-47 |
Msa0240540 | Msa0837710 | 0.816654 | 4.947119e-52 | -8.615850e-47 |
Msa0240540 | Msa0838620 | -0.801467 | 8.882919e-49 | -8.615850e-47 |
Msa0240540 | Msa0840520 | 0.812400 | 4.321052e-51 | -8.615850e-47 |
Msa0240540 | Msa0846900 | 0.800936 | 1.140390e-48 | -8.615850e-47 |
Msa0240540 | Msa0851760 | 0.812384 | 4.356454e-51 | -8.615850e-47 |
Msa0240540 | Msa0853590 | 0.814536 | 1.465659e-51 | -8.615850e-47 |
Msa0240540 | Msa0861440 | 0.809707 | 1.656162e-50 | -8.615850e-47 |
Msa0240540 | Msa0865420 | 0.813940 | 1.984998e-51 | -8.615850e-47 |
Msa0240540 | Msa0880910 | 0.814884 | 1.227179e-51 | -8.615850e-47 |
Msa0240540 | Msa0903340 | 0.819105 | 1.383295e-52 | -8.615850e-47 |
Msa0240540 | Msa0926310 | 0.809717 | 1.648215e-50 | -8.615850e-47 |
Msa0240540 | Msa0930770 | 0.877617 | 5.442526e-69 | -8.615850e-47 |
Msa0240540 | Msa0932140 | 0.819493 | 1.128465e-52 | -8.615850e-47 |
Msa0240540 | Msa0932150 | 0.812907 | 3.346613e-51 | -8.615850e-47 |
Msa0240540 | Msa0967780 | 0.813733 | 2.203787e-51 | -8.615850e-47 |
Msa0240540 | Msa0970270 | 0.831823 | 1.341953e-55 | -8.615850e-47 |
Msa0240540 | Msa0981670 | 0.807032 | 6.162914e-50 | -8.615850e-47 |
Msa0240540 | Msa0982730 | 0.828711 | 7.725115e-55 | -8.615850e-47 |
Msa0240540 | Msa1013190 | 0.813821 | 2.108219e-51 | -8.615850e-47 |
Msa0240540 | Msa1019200 | 0.829600 | 4.701685e-55 | -8.615850e-47 |
Msa0240540 | Msa1021560 | 0.828067 | 1.104864e-54 | -8.615850e-47 |
Msa0240540 | Msa1024570 | 0.805991 | 1.021603e-49 | -8.615850e-47 |
Msa0240540 | Msa1029820 | 0.830179 | 3.397627e-55 | -8.615850e-47 |
Msa0240540 | Msa1041170 | 0.831698 | 1.440049e-55 | -8.615850e-47 |
Msa0240540 | Msa1042300 | 0.805991 | 1.021650e-49 | -8.615850e-47 |
Msa0240540 | Msa1044250 | 0.800321 | 1.522531e-48 | -8.615850e-47 |
Msa0240540 | Msa1050260 | 0.817599 | 3.033963e-52 | -8.615850e-47 |
Msa0240540 | Msa1060300 | 0.813902 | 2.023212e-51 | -8.615850e-47 |
Msa0240540 | Msa1068710 | 0.809001 | 2.347924e-50 | -8.615850e-47 |
Msa0240540 | Msa1068730 | 0.805594 | 1.238114e-49 | -8.615850e-47 |
Msa0240540 | Msa1068940 | 0.833081 | 6.543840e-56 | -8.615850e-47 |
Msa0240540 | Msa1105580 | 0.800538 | 1.375249e-48 | -8.615850e-47 |
Msa0240540 | Msa1124210 | 0.831641 | 1.488034e-55 | -8.615850e-47 |
Msa0240540 | Msa1147700 | 0.834760 | 2.486936e-56 | -8.615850e-47 |
Msa0240540 | Msa1148930 | 0.815255 | 1.015514e-51 | -8.615850e-47 |
Msa0240540 | Msa1149910 | 0.826409 | 2.756597e-54 | -8.615850e-47 |
Msa0240540 | Msa1156710 | 0.828256 | 9.949075e-55 | -8.615850e-47 |
Msa0240540 | Msa1165460 | 0.824757 | 6.789997e-54 | -8.615850e-47 |
Msa0240540 | Msa1188930 | 0.808772 | 2.627474e-50 | -8.615850e-47 |
Msa0240540 | Msa1192360 | 0.805724 | 1.162527e-49 | -8.615850e-47 |
Msa0240540 | Msa1199850 | 0.828003 | 1.144680e-54 | -8.615850e-47 |
Msa0240540 | Msa1201170 | 0.806939 | 6.447313e-50 | -8.615850e-47 |
Msa0240540 | Msa1217890 | 0.822213 | 2.671076e-53 | -8.615850e-47 |
Msa0240540 | Msa1226370 | 0.823956 | 1.047383e-53 | -8.615850e-47 |
Msa0240540 | Msa1240940 | 0.804649 | 1.952361e-49 | -8.615850e-47 |
Msa0240540 | Msa1255710 | 0.833100 | 6.473932e-56 | -8.615850e-47 |
Msa0240540 | Msa1282300 | 0.822989 | 1.763391e-53 | -8.615850e-47 |
Msa0240540 | Msa1293840 | 0.808247 | 3.401378e-50 | -8.615850e-47 |
Msa0240540 | Msa1294280 | 0.837383 | 5.370320e-57 | -8.615850e-47 |
Msa0240540 | Msa1297220 | -0.805560 | 1.258270e-49 | -8.615850e-47 |
Msa0240540 | Msa1311370 | 0.805344 | 1.396797e-49 | -8.615850e-47 |
Msa0240540 | Msa1322980 | 0.807938 | 3.958489e-50 | -8.615850e-47 |
Msa0240540 | Msa1323260 | -0.827024 | 1.965692e-54 | -8.615850e-47 |
Msa0240540 | Msa1328280 | 0.815193 | 1.047799e-51 | -8.615850e-47 |
Msa0240540 | Msa1334560 | 0.809674 | 1.683524e-50 | -8.615850e-47 |
Msa0240540 | Msa1339200 | 0.823444 | 1.380476e-53 | -8.615850e-47 |
Msa0240540 | Msa1342760 | 0.849892 | 2.415415e-60 | -8.615850e-47 |
Msa0240540 | Msa1347390 | 0.828699 | 7.775624e-55 | -8.615850e-47 |
Msa0240540 | Msa1361990 | 0.825932 | 3.579398e-54 | -8.615850e-47 |
Msa0240540 | Msa1371800 | 0.817693 | 2.888698e-52 | -8.615850e-47 |
Msa0240540 | Msa1376310 | 0.818724 | 1.688250e-52 | -8.615850e-47 |
Msa0240540 | Msa1381010 | 0.804959 | 1.681841e-49 | -8.615850e-47 |
Msa0240540 | Msa1382830 | 0.813452 | 2.541734e-51 | -8.615850e-47 |
Msa0240540 | Msa1385570 | 0.801823 | 7.506502e-49 | -8.615850e-47 |
Msa0240540 | Msa1396100 | 0.817035 | 4.062243e-52 | -8.615850e-47 |
Msa0240540 | Msa1402010 | 0.831758 | 1.392443e-55 | -8.615850e-47 |
Msa0240540 | Msa1405830 | 0.818920 | 1.523737e-52 | -8.615850e-47 |
Msa0240540 | Msa1406090 | 0.803920 | 2.768317e-49 | -8.615850e-47 |
Msa0240540 | Msa1407810 | 0.831923 | 1.267809e-55 | -8.615850e-47 |
Msa0240540 | Msa1413020 | 0.818364 | 2.037277e-52 | -8.615850e-47 |
Msa0240540 | Msa1433360 | 0.808111 | 3.635399e-50 | -8.615850e-47 |
Msa0240540 | Msa1436620 | 0.806689 | 7.282820e-50 | -8.615850e-47 |
Msa0240540 | Msa1437780 | 0.829940 | 3.885530e-55 | -8.615850e-47 |
Msa0240540 | Msa1455360 | 0.801053 | 1.079756e-48 | -8.615850e-47 |
Msa0240540 | Msa1458790 | 0.824913 | 6.237304e-54 | -8.615850e-47 |
Msa0240540 | Msa1462780 | 0.830215 | 3.330122e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0240540 | MtrunA17_Chr2g0292051 | 97.494 | 439 | 10 | 1 | 1 | 438 | 1 | 439 | 0.0 | 862 |
Msa0240540 | MtrunA17_Chr1g0199801 | 46.358 | 453 | 188 | 12 | 20 | 418 | 11 | 462 | 3.15e-132 | 389 |
Msa0240540 | MtrunA17_Chr1g0185551 | 36.697 | 436 | 191 | 10 | 23 | 432 | 1 | 377 | 2.30e-77 | 245 |
Msa0240540 | MtrunA17_Chr7g0259871 | 38.875 | 391 | 190 | 11 | 23 | 395 | 1 | 360 | 8.52e-75 | 238 |
Msa0240540 | MtrunA17_Chr5g0402451 | 30.548 | 347 | 187 | 15 | 68 | 366 | 10 | 350 | 1.38e-27 | 113 |
Msa0240540 | MtrunA17_Chr5g0402441 | 30.857 | 350 | 179 | 17 | 68 | 366 | 16 | 353 | 8.55e-27 | 111 |
Msa0240540 | MtrunA17_Chr1g0153781 | 26.603 | 421 | 238 | 16 | 53 | 421 | 6 | 407 | 8.65e-24 | 102 |
Msa0240540 | MtrunA17_Chr8g0335591 | 27.913 | 369 | 226 | 17 | 68 | 401 | 32 | 395 | 6.46e-23 | 100 |
Msa0240540 | MtrunA17_Chr3g0133691 | 28.065 | 367 | 210 | 17 | 85 | 402 | 36 | 397 | 1.18e-22 | 99.4 |
Msa0240540 | MtrunA17_Chr8g0335581 | 25.455 | 385 | 245 | 13 | 68 | 416 | 21 | 399 | 1.70e-22 | 99.0 |
Msa0240540 | MtrunA17_Chr8g0335611 | 28.649 | 370 | 224 | 15 | 68 | 401 | 32 | 397 | 2.11e-21 | 95.9 |
Msa0240540 | MtrunA17_Chr3g0133681 | 26.829 | 369 | 212 | 17 | 85 | 402 | 36 | 397 | 3.75e-21 | 95.1 |
Msa0240540 | MtrunA17_Chr8g0335621 | 28.378 | 370 | 225 | 15 | 68 | 401 | 63 | 428 | 7.85e-21 | 94.4 |
Msa0240540 | MtrunA17_Chr8g0335631 | 27.507 | 349 | 212 | 13 | 88 | 401 | 51 | 393 | 3.35e-20 | 92.4 |
Msa0240540 | MtrunA17_Chr8g0335651 | 28.070 | 342 | 208 | 14 | 88 | 401 | 52 | 383 | 1.19e-19 | 90.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0240540 | AT3G54950.1 | 48.519 | 439 | 197 | 7 | 2 | 413 | 31 | 467 | 2.24e-135 | 398 |
Msa0240540 | AT2G39220.1 | 47.511 | 442 | 183 | 7 | 20 | 413 | 40 | 480 | 1.92e-130 | 386 |
Msa0240540 | AT4G29800.1 | 42.333 | 463 | 201 | 8 | 16 | 413 | 43 | 504 | 1.08e-112 | 341 |
Msa0240540 | AT4G29800.2 | 42.241 | 464 | 201 | 9 | 16 | 413 | 43 | 505 | 7.98e-111 | 337 |
Msa0240540 | AT3G63200.1 | 41.872 | 406 | 178 | 11 | 23 | 408 | 3 | 370 | 9.50e-87 | 270 |
Msa0240540 | AT4G37060.1 | 30.130 | 385 | 217 | 18 | 68 | 404 | 19 | 399 | 1.49e-28 | 116 |
Msa0240540 | AT2G26560.1 | 29.551 | 379 | 219 | 15 | 68 | 401 | 19 | 394 | 1.38e-25 | 108 |
Msa0240540 | AT4G37070.2 | 28.385 | 384 | 220 | 17 | 68 | 402 | 19 | 396 | 2.99e-24 | 104 |
Msa0240540 | AT4G37060.2 | 27.952 | 415 | 218 | 19 | 68 | 404 | 19 | 430 | 1.28e-23 | 103 |
Msa0240540 | AT4G37070.3 | 28.649 | 370 | 209 | 17 | 68 | 388 | 19 | 382 | 3.73e-23 | 100 |
Msa0240540 | AT4G37070.1 | 28.649 | 370 | 209 | 17 | 68 | 388 | 19 | 382 | 3.73e-23 | 100 |
Msa0240540 | AT4G37050.1 | 28.032 | 371 | 209 | 16 | 88 | 403 | 54 | 421 | 4.29e-23 | 101 |
Msa0240540 | AT5G43590.1 | 27.778 | 288 | 168 | 10 | 88 | 337 | 33 | 318 | 1.36e-20 | 93.6 |
Msa0240540 | AT5G43590.2 | 27.778 | 288 | 168 | 10 | 88 | 337 | 100 | 385 | 2.76e-20 | 93.2 |
Msa0240540 | AT4G37070.4 | 27.297 | 370 | 203 | 17 | 68 | 388 | 19 | 371 | 2.96e-19 | 89.4 |
Find 116 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTACGAAATCTTCTCCATTT+TGG | 0.129885 | 2_2:+15793358 | Msa0240540:CDS |
AACTTAATGTCTTGTGGTTT+TGG | 0.200873 | 2_2:+15795028 | Msa0240540:three_prime_UTR |
GTGTATTGAAACATTGATTA+TGG | 0.206328 | 2_2:+15795312 | Msa0240540:three_prime_UTR |
GTTGAGTCAGTCTTATTTAA+AGG | 0.208877 | 2_2:+15794707 | Msa0240540:CDS |
ATCGGATTTGGTGGCGGTTT+CGG | 0.267788 | 2_2:+15794661 | Msa0240540:CDS |
TTGGAAAACAAATTCTTATT+CGG | 0.286942 | 2_2:+15793377 | Msa0240540:CDS |
GGTAGGTTGTAGTAATATTA+AGG | 0.321641 | 2_2:-15795108 | None:intergenic |
TTAGACAAATTGAAATTGTT+TGG | 0.328034 | 2_2:+15794755 | Msa0240540:CDS |
GTGATAGTGATTTGTTCATA+TGG | 0.342580 | 2_2:+15795197 | Msa0240540:three_prime_UTR |
GTTTGGTGGAGAGTTGATTA+AGG | 0.342805 | 2_2:+15794772 | Msa0240540:CDS |
AATATGAGAGTTATTGTTAC+CGG | 0.360900 | 2_2:-15793567 | None:intergenic |
GCAGAGAATTCTGACTTTCC+CGG | 0.367032 | 2_2:-15793465 | None:intergenic |
GTCCTAGGAGATGAAGTTCT+AGG | 0.368900 | 2_2:-15794857 | None:intergenic |
TCAGGTTTCGTGAGAATTGC+CGG | 0.370289 | 2_2:+15794172 | Msa0240540:CDS |
AAGAAAAGAGGAAGATTAGT+AGG | 0.373541 | 2_2:+15794942 | Msa0240540:three_prime_UTR |
TGTGTGTTGGTTGTTGAAAA+TGG | 0.373674 | 2_2:-15793178 | None:intergenic |
AACAGAATTTCGCGACGATC+GGG | 0.376308 | 2_2:+15793722 | Msa0240540:CDS |
GGGGAAAACCACATCGGATT+TGG | 0.391408 | 2_2:+15794649 | Msa0240540:CDS |
GAGGATGCCGTCGGTGTAAC+CGG | 0.403495 | 2_2:-15793498 | None:intergenic |
CCAACTGTTGTGTTGAAGAA+TGG | 0.412565 | 2_2:+15794824 | Msa0240540:CDS |
TTCGACGCCGTCGCCGGCTC+CGG | 0.421417 | 2_2:+15793599 | Msa0240540:CDS |
TAACGGTGTTTCTGATTTGT+TGG | 0.422061 | 2_2:+15794099 | Msa0240540:CDS |
CGCGACGATCGGGGATTCTC+CGG | 0.426841 | 2_2:+15793732 | Msa0240540:CDS |
GATTTGTTGGTGCTTTCTCT+TGG | 0.427963 | 2_2:+15794112 | Msa0240540:CDS |
CAAGCTGTATCAATGGCATT+TGG | 0.428031 | 2_2:+15794554 | Msa0240540:CDS |
TATGTGCGGATTCAATCAAA+TGG | 0.437366 | 2_2:+15794596 | Msa0240540:CDS |
CGGTGAAGGAGCTTCCGATA+TGG | 0.438606 | 2_2:+15794192 | Msa0240540:CDS |
TTCATATGGGTATTGTCAAA+AGG | 0.445205 | 2_2:+15795211 | Msa0240540:three_prime_UTR |
ACGAAGATCTTAGCCGTTGA+TGG | 0.448292 | 2_2:+15794001 | Msa0240540:CDS |
GAAACCTGAGGGAGACTTAA+CGG | 0.454179 | 2_2:-15794158 | None:intergenic |
AACACCACCGACACCGGAGC+CGG | 0.455808 | 2_2:-15793612 | None:intergenic |
TGATAGTGATTTGTTCATAT+GGG | 0.456559 | 2_2:+15795198 | Msa0240540:three_prime_UTR |
TACGTCTGAGGCAGGATTCA+AGG | 0.458683 | 2_2:-15793541 | None:intergenic |
TCGTAGCAGGGAATTAAAAT+CGG | 0.459582 | 2_2:-15793836 | None:intergenic |
GTCAGAATTCTCTGCATTGA+CGG | 0.462797 | 2_2:+15793473 | Msa0240540:CDS |
GCGCGTGACGAGATCGTAGC+AGG | 0.470309 | 2_2:-15793849 | None:intergenic |
ACCGGATTTACGTCTGAGGC+AGG | 0.472586 | 2_2:-15793549 | None:intergenic |
GCCGTCGCCGGCTCCGGTGT+CGG | 0.475467 | 2_2:+15793605 | Msa0240540:CDS |
TCCTAGGAGATGAAGTTCTA+GGG | 0.478439 | 2_2:-15794856 | None:intergenic |
TCCTGCCTCAGACGTAAATC+CGG | 0.478939 | 2_2:+15793548 | Msa0240540:CDS |
AAGGTAAACAAAGGGAAGAC+GGG | 0.479023 | 2_2:+15794629 | Msa0240540:CDS |
GGCGGTTTCGGAGGAGATGT+TGG | 0.485077 | 2_2:+15794673 | Msa0240540:CDS |
GACAAATTGAAATTGTTTGG+TGG | 0.485720 | 2_2:+15794758 | Msa0240540:CDS |
TCGATGGACTTCAATTCAAT+AGG | 0.487410 | 2_2:-15793971 | None:intergenic |
ATGTGCGGATTCAATCAAAT+GGG | 0.488399 | 2_2:+15794597 | Msa0240540:CDS |
TTCAATTCAATAGGAGCCGC+TGG | 0.490050 | 2_2:-15793962 | None:intergenic |
GGATTCAACACTGCACAGCT+TGG | 0.491021 | 2_2:-15795083 | None:intergenic |
TAACAGAATTTCGCGACGAT+CGG | 0.492357 | 2_2:+15793721 | Msa0240540:CDS |
AAATGAAATAATTATAATGT+AGG | 0.494177 | 2_2:-15795129 | None:intergenic |
TTCTCTTGGTAACGGAGAGT+TGG | 0.496512 | 2_2:+15794126 | Msa0240540:CDS |
GAAAGAGAGAATTTGTGTGT+TGG | 0.497803 | 2_2:-15793191 | None:intergenic |
GAAATAATTATAATGTAGGT+AGG | 0.499493 | 2_2:-15795125 | None:intergenic |
GGTTGTAGTAATATTAAGGA+TGG | 0.505680 | 2_2:-15795104 | None:intergenic |
TTGGTGCTTTCTCTTGGTAA+CGG | 0.511918 | 2_2:+15794118 | Msa0240540:CDS |
AACCACATCGGATTTGGTGG+CGG | 0.512460 | 2_2:+15794655 | Msa0240540:CDS |
GAAAACCACATCGGATTTGG+TGG | 0.517533 | 2_2:+15794652 | Msa0240540:CDS |
GTAGTAGCTGATGAAGTCCT+AGG | 0.521279 | 2_2:-15794872 | None:intergenic |
GGTTGATCAAGCTGTATCAA+TGG | 0.525148 | 2_2:+15794547 | Msa0240540:intron |
CCCCTAGAACTTCATCTCCT+AGG | 0.526050 | 2_2:+15794855 | Msa0240540:CDS |
AGTTGATTAAGGAAGAAGAG+AGG | 0.528571 | 2_2:+15794783 | Msa0240540:CDS |
TTCGTGAGAATTGCCGGTGA+AGG | 0.529684 | 2_2:+15794178 | Msa0240540:CDS |
GAGTTTATCAACTTCGAAGT+TGG | 0.530248 | 2_2:-15793333 | None:intergenic |
ATCAAATGGGGTGATGGCTA+AGG | 0.530306 | 2_2:+15794610 | Msa0240540:CDS |
AACGCCGTTAAGTCTCCCTC+AGG | 0.530840 | 2_2:+15794154 | Msa0240540:CDS |
AGTCAGTCTTATTTAAAGGA+AGG | 0.532895 | 2_2:+15794711 | Msa0240540:CDS |
CCATTCTTCAACACAACAGT+TGG | 0.536757 | 2_2:-15794824 | None:intergenic |
CATATCGGAAGCTCCTTCAC+CGG | 0.540361 | 2_2:-15794191 | None:intergenic |
ATTCTCTGCATTGACGGCGC+CGG | 0.540611 | 2_2:+15793479 | Msa0240540:CDS |
GATCTTCGTCTTCCCATCGA+TGG | 0.541076 | 2_2:-15793987 | None:intergenic |
TAAGGTAAACAAAGGGAAGA+CGG | 0.544495 | 2_2:+15794628 | Msa0240540:CDS |
TCAGAAACACCGTTACAAAA+CGG | 0.547389 | 2_2:-15794091 | None:intergenic |
AGCGAGAACACCACCGACAC+CGG | 0.553617 | 2_2:-15793618 | None:intergenic |
ACCGACACCGGAGCCGGCGA+CGG | 0.555732 | 2_2:-15793606 | None:intergenic |
TTCAAGTTGTTGTTGAACAT+TGG | 0.561464 | 2_2:-15793293 | None:intergenic |
GGAGATGAAGTTCTAGGGGA+GGG | 0.565558 | 2_2:-15794851 | None:intergenic |
CAAAATGGAGAAGATTTCGT+AGG | 0.566027 | 2_2:-15793357 | None:intergenic |
AAGGTGAGATAGTGATTTCG+CGG | 0.567024 | 2_2:-15793522 | None:intergenic |
GATTTCGAGAGCGTCGGCGC+GGG | 0.567460 | 2_2:-15793888 | None:intergenic |
TGAGTAACAGCAGTAGCCGT+TGG | 0.567616 | 2_2:-15794043 | None:intergenic |
GATTCAATCAAATGGGGTGA+TGG | 0.569656 | 2_2:+15794604 | Msa0240540:CDS |
CAGAAACTTCAAAGCTTCAT+CGG | 0.575680 | 2_2:-15793687 | None:intergenic |
ATTGAATTGAAGTCCATCGA+TGG | 0.577788 | 2_2:+15793974 | Msa0240540:CDS |
AGCCGCTGGATCAGCTGACG+TGG | 0.581310 | 2_2:-15793948 | None:intergenic |
GACGGCGCCGGTTACACCGA+CGG | 0.582223 | 2_2:+15793491 | Msa0240540:CDS |
GGATTTGGTGGCGGTTTCGG+AGG | 0.583638 | 2_2:+15794664 | Msa0240540:CDS |
CATCGCAACACCTCCATCAA+CGG | 0.587463 | 2_2:-15794014 | None:intergenic |
AGGAGATGAAGTTCTAGGGG+AGG | 0.591108 | 2_2:-15794852 | None:intergenic |
TTGAATTGAAGTCCATCGAT+GGG | 0.595371 | 2_2:+15793975 | Msa0240540:CDS |
ACAGAATTTCGCGACGATCG+GGG | 0.599858 | 2_2:+15793723 | Msa0240540:CDS |
ATCGTCGCGAAATTCTGTTA+CGG | 0.601025 | 2_2:-15793718 | None:intergenic |
GTCGCCGGCTCCGGTGTCGG+TGG | 0.603825 | 2_2:+15793608 | Msa0240540:CDS |
CTTTCTTAATCGATCTCAAG+CGG | 0.603928 | 2_2:-15795059 | None:intergenic |
CCTAGGAGATGAAGTTCTAG+GGG | 0.628375 | 2_2:-15794855 | None:intergenic |
TGCCACGTCAGCTGATCCAG+CGG | 0.628488 | 2_2:+15793946 | Msa0240540:CDS |
CGCGTGACGAGATCGTAGCA+GGG | 0.629024 | 2_2:-15793848 | None:intergenic |
AAGATCTTAGCCGTTGATGG+AGG | 0.638110 | 2_2:+15794004 | Msa0240540:CDS |
TTTCGCGGCGAGGATGCCGT+CGG | 0.641184 | 2_2:-15793507 | None:intergenic |
GCAATTCTCACGAAACCTGA+GGG | 0.641382 | 2_2:-15794169 | None:intergenic |
GTAGATTGAACAATTATGTG+CGG | 0.642262 | 2_2:+15794582 | Msa0240540:CDS |
GGCAATTCTCACGAAACCTG+AGG | 0.645971 | 2_2:-15794170 | None:intergenic |
ACCGTCGATTTCGAGAGCGT+CGG | 0.652715 | 2_2:-15793894 | None:intergenic |
GTGATGGCTAAGGTAAACAA+AGG | 0.654646 | 2_2:+15794620 | Msa0240540:CDS |
CGATTTCGAGAGCGTCGGCG+CGG | 0.655501 | 2_2:-15793889 | None:intergenic |
TGATGGCTAAGGTAAACAAA+GGG | 0.662128 | 2_2:+15794621 | Msa0240540:CDS |
ATTTAAAGGAAGGAAGATCG+TGG | 0.667169 | 2_2:+15794721 | Msa0240540:CDS |
TCGGCGCGGGAGAAAACGAA+CGG | 0.671166 | 2_2:-15793875 | None:intergenic |
GCCGACGCTCTCGAAATCGA+CGG | 0.676469 | 2_2:+15793893 | Msa0240540:CDS |
TGTTACCGGATTTACGTCTG+AGG | 0.679992 | 2_2:-15793553 | None:intergenic |
GAGATAGTGATTTCGCGGCG+AGG | 0.680146 | 2_2:-15793517 | None:intergenic |
GCTTCATCGGCAGTGAACAG+AGG | 0.690278 | 2_2:-15793674 | None:intergenic |
AACCGCCACCAAATCCGATG+TGG | 0.694040 | 2_2:-15794657 | None:intergenic |
TGTTGCGATGAACAATCCAA+CGG | 0.695987 | 2_2:+15794027 | Msa0240540:CDS |
AGGTAAACAAAGGGAAGACG+GGG | 0.704588 | 2_2:+15794630 | Msa0240540:CDS |
TGTGCGGATTCAATCAAATG+GGG | 0.705308 | 2_2:+15794598 | Msa0240540:CDS |
GAGAATTCTGACTTTCCCGG+CGG | 0.726321 | 2_2:-15793462 | None:intergenic |
GAAGACGGGGAAAACCACAT+CGG | 0.743605 | 2_2:+15794643 | Msa0240540:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATGAAATAATTATAATGT+AGG | - | chr2_2:15795132-15795151 | None:intergenic | 10.0% |
!! | AAATGAAATAATTATAATGT+AGG | - | chr2_2:15795132-15795151 | None:intergenic | 10.0% |
!! | AAAATAATTCGAAATTGAAT+CGG | + | chr2_2:15794340-15794359 | Msa0240540:intron | 15.0% |
!! | ATGAATGAATATTATAATGT+AGG | + | chr2_2:15794526-15794545 | Msa0240540:intron | 15.0% |
!!! | TAAAAATTAGATTTTGTTGT+GGG | + | chr2_2:15794974-15794993 | Msa0240540:three_prime_UTR | 15.0% |
!!! | TTTTTATCTTTGTTTAGTTT+TGG | + | chr2_2:15795154-15795173 | Msa0240540:three_prime_UTR | 15.0% |
!! | AAAATAATTCGAAATTGAAT+CGG | + | chr2_2:15794340-15794359 | Msa0240540:intron | 15.0% |
!! | ATGAATGAATATTATAATGT+AGG | + | chr2_2:15794526-15794545 | Msa0240540:intron | 15.0% |
!!! | TAAAAATTAGATTTTGTTGT+GGG | + | chr2_2:15794974-15794993 | Msa0240540:three_prime_UTR | 15.0% |
!!! | TTTTTATCTTTGTTTAGTTT+TGG | + | chr2_2:15795154-15795173 | Msa0240540:three_prime_UTR | 15.0% |
!!! | TAAGAATTTGTTTTCCAAAA+TGG | - | chr2_2:15793375-15793394 | None:intergenic | 20.0% |
!! | TTGGAAAACAAATTCTTATT+CGG | + | chr2_2:15793377-15793396 | Msa0240540:CDS | 20.0% |
!!! | GAATTTTTTTCTTACCATAT+CGG | - | chr2_2:15794209-15794228 | None:intergenic | 20.0% |
!! | TTAGACAAATTGAAATTGTT+TGG | + | chr2_2:15794755-15794774 | Msa0240540:CDS | 20.0% |
!!! | CTAAAAATTAGATTTTGTTG+TGG | + | chr2_2:15794973-15794992 | Msa0240540:three_prime_UTR | 20.0% |
!! | GAAATAATTATAATGTAGGT+AGG | - | chr2_2:15795128-15795147 | None:intergenic | 20.0% |
!!! | TAAGAATTTGTTTTCCAAAA+TGG | - | chr2_2:15793375-15793394 | None:intergenic | 20.0% |
!! | TTGGAAAACAAATTCTTATT+CGG | + | chr2_2:15793377-15793396 | Msa0240540:CDS | 20.0% |
!!! | GAATTTTTTTCTTACCATAT+CGG | - | chr2_2:15794209-15794228 | None:intergenic | 20.0% |
!! | TTAGACAAATTGAAATTGTT+TGG | + | chr2_2:15794755-15794774 | Msa0240540:CDS | 20.0% |
!!! | CTAAAAATTAGATTTTGTTG+TGG | + | chr2_2:15794973-15794992 | Msa0240540:three_prime_UTR | 20.0% |
!! | GAAATAATTATAATGTAGGT+AGG | - | chr2_2:15795128-15795147 | None:intergenic | 20.0% |
! | AATATGAGAGTTATTGTTAC+CGG | - | chr2_2:15793570-15793589 | None:intergenic | 25.0% |
!!! | AGAATGTGTTTGTTTTTGTT+AGG | - | chr2_2:15794402-15794421 | None:intergenic | 25.0% |
! | ATTTGTAGTGAATAATGAGT+AGG | + | chr2_2:15794450-15794469 | Msa0240540:intron | 25.0% |
! | TAATGAGTAGGTCTAATTAT+TGG | + | chr2_2:15794462-15794481 | Msa0240540:intron | 25.0% |
! | AAGAAGACAAAAAAGAAAAG+AGG | + | chr2_2:15794930-15794949 | Msa0240540:three_prime_UTR | 25.0% |
!!! | TTTTGAAACTTAATGTCTTG+TGG | + | chr2_2:15795022-15795041 | Msa0240540:three_prime_UTR | 25.0% |
!!! | TGATAGTGATTTGTTCATAT+GGG | + | chr2_2:15795198-15795217 | Msa0240540:three_prime_UTR | 25.0% |
!! | GTGTATTGAAACATTGATTA+TGG | + | chr2_2:15795312-15795331 | Msa0240540:three_prime_UTR | 25.0% |
! | AATATGAGAGTTATTGTTAC+CGG | - | chr2_2:15793570-15793589 | None:intergenic | 25.0% |
!!! | AGAATGTGTTTGTTTTTGTT+AGG | - | chr2_2:15794402-15794421 | None:intergenic | 25.0% |
! | ATTTGTAGTGAATAATGAGT+AGG | + | chr2_2:15794450-15794469 | Msa0240540:intron | 25.0% |
! | TAATGAGTAGGTCTAATTAT+TGG | + | chr2_2:15794462-15794481 | Msa0240540:intron | 25.0% |
! | AAGAAGACAAAAAAGAAAAG+AGG | + | chr2_2:15794930-15794949 | Msa0240540:three_prime_UTR | 25.0% |
!!! | TTTTGAAACTTAATGTCTTG+TGG | + | chr2_2:15795022-15795041 | Msa0240540:three_prime_UTR | 25.0% |
!!! | TGATAGTGATTTGTTCATAT+GGG | + | chr2_2:15795198-15795217 | Msa0240540:three_prime_UTR | 25.0% |
!! | GTGTATTGAAACATTGATTA+TGG | + | chr2_2:15795312-15795331 | Msa0240540:three_prime_UTR | 25.0% |
CAACTCAAATTGCAGAAAAA+TGG | + | chr2_2:15793253-15793272 | Msa0240540:exon | 30.0% | |
!! | TTCAAGTTGTTGTTGAACAT+TGG | - | chr2_2:15793296-15793315 | None:intergenic | 30.0% |
! | TTTTTCACCGGAAACAAAAT+CGG | + | chr2_2:15793760-15793779 | Msa0240540:CDS | 30.0% |
! | AAGCTTTTCCGAAAAACATT+CGG | + | chr2_2:15793785-15793804 | Msa0240540:CDS | 30.0% |
ATAATTCGAAATTGAATCGG+TGG | + | chr2_2:15794343-15794362 | Msa0240540:intron | 30.0% | |
GTAGATTGAACAATTATGTG+CGG | + | chr2_2:15794582-15794601 | Msa0240540:CDS | 30.0% | |
!! | GTTGAGTCAGTCTTATTTAA+AGG | + | chr2_2:15794707-15794726 | Msa0240540:CDS | 30.0% |
!! | AGTCAGTCTTATTTAAAGGA+AGG | + | chr2_2:15794711-15794730 | Msa0240540:CDS | 30.0% |
GACAAATTGAAATTGTTTGG+TGG | + | chr2_2:15794758-15794777 | Msa0240540:CDS | 30.0% | |
AAGAAAAGAGGAAGATTAGT+AGG | + | chr2_2:15794942-15794961 | Msa0240540:three_prime_UTR | 30.0% | |
! | AACTTAATGTCTTGTGGTTT+TGG | + | chr2_2:15795028-15795047 | Msa0240540:three_prime_UTR | 30.0% |
! | ACTTAATGTCTTGTGGTTTT+GGG | + | chr2_2:15795029-15795048 | Msa0240540:three_prime_UTR | 30.0% |
GGTTGTAGTAATATTAAGGA+TGG | - | chr2_2:15795107-15795126 | None:intergenic | 30.0% | |
GGTAGGTTGTAGTAATATTA+AGG | - | chr2_2:15795111-15795130 | None:intergenic | 30.0% | |
!! | GTGATAGTGATTTGTTCATA+TGG | + | chr2_2:15795197-15795216 | Msa0240540:three_prime_UTR | 30.0% |
! | TTCATATGGGTATTGTCAAA+AGG | + | chr2_2:15795211-15795230 | Msa0240540:three_prime_UTR | 30.0% |
! | CAAAAGGTGAATTTTGTACA+AGG | + | chr2_2:15795227-15795246 | Msa0240540:three_prime_UTR | 30.0% |
CAACTCAAATTGCAGAAAAA+TGG | + | chr2_2:15793253-15793272 | Msa0240540:exon | 30.0% | |
!! | TTCAAGTTGTTGTTGAACAT+TGG | - | chr2_2:15793296-15793315 | None:intergenic | 30.0% |
! | TTTTTCACCGGAAACAAAAT+CGG | + | chr2_2:15793760-15793779 | Msa0240540:CDS | 30.0% |
! | AAGCTTTTCCGAAAAACATT+CGG | + | chr2_2:15793785-15793804 | Msa0240540:CDS | 30.0% |
ATAATTCGAAATTGAATCGG+TGG | + | chr2_2:15794343-15794362 | Msa0240540:intron | 30.0% | |
GTAGATTGAACAATTATGTG+CGG | + | chr2_2:15794582-15794601 | Msa0240540:CDS | 30.0% | |
!! | GTTGAGTCAGTCTTATTTAA+AGG | + | chr2_2:15794707-15794726 | Msa0240540:CDS | 30.0% |
!! | AGTCAGTCTTATTTAAAGGA+AGG | + | chr2_2:15794711-15794730 | Msa0240540:CDS | 30.0% |
GACAAATTGAAATTGTTTGG+TGG | + | chr2_2:15794758-15794777 | Msa0240540:CDS | 30.0% | |
AAGAAAAGAGGAAGATTAGT+AGG | + | chr2_2:15794942-15794961 | Msa0240540:three_prime_UTR | 30.0% | |
! | AACTTAATGTCTTGTGGTTT+TGG | + | chr2_2:15795028-15795047 | Msa0240540:three_prime_UTR | 30.0% |
! | ACTTAATGTCTTGTGGTTTT+GGG | + | chr2_2:15795029-15795048 | Msa0240540:three_prime_UTR | 30.0% |
GGTTGTAGTAATATTAAGGA+TGG | - | chr2_2:15795107-15795126 | None:intergenic | 30.0% | |
GGTAGGTTGTAGTAATATTA+AGG | - | chr2_2:15795111-15795130 | None:intergenic | 30.0% | |
!! | GTGATAGTGATTTGTTCATA+TGG | + | chr2_2:15795197-15795216 | Msa0240540:three_prime_UTR | 30.0% |
! | TTCATATGGGTATTGTCAAA+AGG | + | chr2_2:15795211-15795230 | Msa0240540:three_prime_UTR | 30.0% |
! | CAAAAGGTGAATTTTGTACA+AGG | + | chr2_2:15795227-15795246 | Msa0240540:three_prime_UTR | 30.0% |
!! | TGTGTGTTGGTTGTTGAAAA+TGG | - | chr2_2:15793181-15793200 | None:intergenic | 35.0% |
GAAAGAGAGAATTTGTGTGT+TGG | - | chr2_2:15793194-15793213 | None:intergenic | 35.0% | |
CTCAAATTGCAGAAAAATGG+CGG | + | chr2_2:15793256-15793275 | Msa0240540:exon | 35.0% | |
GAGTTTATCAACTTCGAAGT+TGG | - | chr2_2:15793336-15793355 | None:intergenic | 35.0% | |
CAAAATGGAGAAGATTTCGT+AGG | - | chr2_2:15793360-15793379 | None:intergenic | 35.0% | |
! | CTACGAAATCTTCTCCATTT+TGG | + | chr2_2:15793358-15793377 | Msa0240540:CDS | 35.0% |
! | AAGCGAATTCTTCGCATTTT+CGG | - | chr2_2:15793414-15793433 | None:intergenic | 35.0% |
CAGAAACTTCAAAGCTTCAT+CGG | - | chr2_2:15793690-15793709 | None:intergenic | 35.0% | |
! | TGCATTCTCCGAATGTTTTT+CGG | - | chr2_2:15793796-15793815 | None:intergenic | 35.0% |
TCGTAGCAGGGAATTAAAAT+CGG | - | chr2_2:15793839-15793858 | None:intergenic | 35.0% | |
! | TCGATGGACTTCAATTCAAT+AGG | - | chr2_2:15793974-15793993 | None:intergenic | 35.0% |
ATTGAATTGAAGTCCATCGA+TGG | + | chr2_2:15793974-15793993 | Msa0240540:CDS | 35.0% | |
TTGAATTGAAGTCCATCGAT+GGG | + | chr2_2:15793975-15793994 | Msa0240540:CDS | 35.0% | |
! | CATGAGTTTCCGTTTTGTAA+CGG | + | chr2_2:15794082-15794101 | Msa0240540:CDS | 35.0% |
TCAGAAACACCGTTACAAAA+CGG | - | chr2_2:15794094-15794113 | None:intergenic | 35.0% | |
! | TAACGGTGTTTCTGATTTGT+TGG | + | chr2_2:15794099-15794118 | Msa0240540:CDS | 35.0% |
TATGTGCGGATTCAATCAAA+TGG | + | chr2_2:15794596-15794615 | Msa0240540:CDS | 35.0% | |
ATGTGCGGATTCAATCAAAT+GGG | + | chr2_2:15794597-15794616 | Msa0240540:CDS | 35.0% | |
TGATGGCTAAGGTAAACAAA+GGG | + | chr2_2:15794621-15794640 | Msa0240540:CDS | 35.0% | |
TAAGGTAAACAAAGGGAAGA+CGG | + | chr2_2:15794628-15794647 | Msa0240540:CDS | 35.0% | |
ATTTAAAGGAAGGAAGATCG+TGG | + | chr2_2:15794721-15794740 | Msa0240540:CDS | 35.0% | |
AGTTGATTAAGGAAGAAGAG+AGG | + | chr2_2:15794783-15794802 | Msa0240540:CDS | 35.0% | |
CTTTCTTAATCGATCTCAAG+CGG | - | chr2_2:15795062-15795081 | None:intergenic | 35.0% | |
!! | TGTGTGTTGGTTGTTGAAAA+TGG | - | chr2_2:15793181-15793200 | None:intergenic | 35.0% |
GAAAGAGAGAATTTGTGTGT+TGG | - | chr2_2:15793194-15793213 | None:intergenic | 35.0% | |
CTCAAATTGCAGAAAAATGG+CGG | + | chr2_2:15793256-15793275 | Msa0240540:exon | 35.0% | |
GAGTTTATCAACTTCGAAGT+TGG | - | chr2_2:15793336-15793355 | None:intergenic | 35.0% | |
CAAAATGGAGAAGATTTCGT+AGG | - | chr2_2:15793360-15793379 | None:intergenic | 35.0% | |
! | CTACGAAATCTTCTCCATTT+TGG | + | chr2_2:15793358-15793377 | Msa0240540:CDS | 35.0% |
! | AAGCGAATTCTTCGCATTTT+CGG | - | chr2_2:15793414-15793433 | None:intergenic | 35.0% |
CAGAAACTTCAAAGCTTCAT+CGG | - | chr2_2:15793690-15793709 | None:intergenic | 35.0% | |
! | TGCATTCTCCGAATGTTTTT+CGG | - | chr2_2:15793796-15793815 | None:intergenic | 35.0% |
TCGTAGCAGGGAATTAAAAT+CGG | - | chr2_2:15793839-15793858 | None:intergenic | 35.0% | |
! | TCGATGGACTTCAATTCAAT+AGG | - | chr2_2:15793974-15793993 | None:intergenic | 35.0% |
ATTGAATTGAAGTCCATCGA+TGG | + | chr2_2:15793974-15793993 | Msa0240540:CDS | 35.0% | |
TTGAATTGAAGTCCATCGAT+GGG | + | chr2_2:15793975-15793994 | Msa0240540:CDS | 35.0% | |
! | CATGAGTTTCCGTTTTGTAA+CGG | + | chr2_2:15794082-15794101 | Msa0240540:CDS | 35.0% |
TCAGAAACACCGTTACAAAA+CGG | - | chr2_2:15794094-15794113 | None:intergenic | 35.0% | |
! | TAACGGTGTTTCTGATTTGT+TGG | + | chr2_2:15794099-15794118 | Msa0240540:CDS | 35.0% |
TATGTGCGGATTCAATCAAA+TGG | + | chr2_2:15794596-15794615 | Msa0240540:CDS | 35.0% | |
ATGTGCGGATTCAATCAAAT+GGG | + | chr2_2:15794597-15794616 | Msa0240540:CDS | 35.0% | |
TGATGGCTAAGGTAAACAAA+GGG | + | chr2_2:15794621-15794640 | Msa0240540:CDS | 35.0% | |
TAAGGTAAACAAAGGGAAGA+CGG | + | chr2_2:15794628-15794647 | Msa0240540:CDS | 35.0% | |
ATTTAAAGGAAGGAAGATCG+TGG | + | chr2_2:15794721-15794740 | Msa0240540:CDS | 35.0% | |
AGTTGATTAAGGAAGAAGAG+AGG | + | chr2_2:15794783-15794802 | Msa0240540:CDS | 35.0% | |
CTTTCTTAATCGATCTCAAG+CGG | - | chr2_2:15795062-15795081 | None:intergenic | 35.0% | |
!! | ATTCTTCGCATTTTCGGTGT+CGG | - | chr2_2:15793408-15793427 | None:intergenic | 40.0% |
GTCAGAATTCTCTGCATTGA+CGG | + | chr2_2:15793473-15793492 | Msa0240540:CDS | 40.0% | |
AAGGTGAGATAGTGATTTCG+CGG | - | chr2_2:15793525-15793544 | None:intergenic | 40.0% | |
ATCGTCGCGAAATTCTGTTA+CGG | - | chr2_2:15793721-15793740 | None:intergenic | 40.0% | |
TAACAGAATTTCGCGACGAT+CGG | + | chr2_2:15793721-15793740 | Msa0240540:CDS | 40.0% | |
!! | AGCTTCTCCGATTTTGTTTC+CGG | - | chr2_2:15793770-15793789 | None:intergenic | 40.0% |
TGTTGCGATGAACAATCCAA+CGG | + | chr2_2:15794027-15794046 | Msa0240540:CDS | 40.0% | |
!! | GATTTGTTGGTGCTTTCTCT+TGG | + | chr2_2:15794112-15794131 | Msa0240540:CDS | 40.0% |
! | TTGGTGCTTTCTCTTGGTAA+CGG | + | chr2_2:15794118-15794137 | Msa0240540:CDS | 40.0% |
TGAATCGGTGGTTACTAGTT+AGG | + | chr2_2:15794355-15794374 | Msa0240540:intron | 40.0% | |
GGTTGATCAAGCTGTATCAA+TGG | + | chr2_2:15794547-15794566 | Msa0240540:intron | 40.0% | |
CAAGCTGTATCAATGGCATT+TGG | + | chr2_2:15794554-15794573 | Msa0240540:CDS | 40.0% | |
TGTGCGGATTCAATCAAATG+GGG | + | chr2_2:15794598-15794617 | Msa0240540:CDS | 40.0% | |
GATTCAATCAAATGGGGTGA+TGG | + | chr2_2:15794604-15794623 | Msa0240540:CDS | 40.0% | |
GTGATGGCTAAGGTAAACAA+AGG | + | chr2_2:15794620-15794639 | Msa0240540:CDS | 40.0% | |
AAGGTAAACAAAGGGAAGAC+GGG | + | chr2_2:15794629-15794648 | Msa0240540:CDS | 40.0% | |
! | GTTTGGTGGAGAGTTGATTA+AGG | + | chr2_2:15794772-15794791 | Msa0240540:CDS | 40.0% |
CCATTCTTCAACACAACAGT+TGG | - | chr2_2:15794827-15794846 | None:intergenic | 40.0% | |
CCAACTGTTGTGTTGAAGAA+TGG | + | chr2_2:15794824-15794843 | Msa0240540:CDS | 40.0% | |
TCCTAGGAGATGAAGTTCTA+GGG | - | chr2_2:15794859-15794878 | None:intergenic | 40.0% | |
!! | ATTCTTCGCATTTTCGGTGT+CGG | - | chr2_2:15793408-15793427 | None:intergenic | 40.0% |
GTCAGAATTCTCTGCATTGA+CGG | + | chr2_2:15793473-15793492 | Msa0240540:CDS | 40.0% | |
AAGGTGAGATAGTGATTTCG+CGG | - | chr2_2:15793525-15793544 | None:intergenic | 40.0% | |
ATCGTCGCGAAATTCTGTTA+CGG | - | chr2_2:15793721-15793740 | None:intergenic | 40.0% | |
TAACAGAATTTCGCGACGAT+CGG | + | chr2_2:15793721-15793740 | Msa0240540:CDS | 40.0% | |
!! | AGCTTCTCCGATTTTGTTTC+CGG | - | chr2_2:15793770-15793789 | None:intergenic | 40.0% |
TGTTGCGATGAACAATCCAA+CGG | + | chr2_2:15794027-15794046 | Msa0240540:CDS | 40.0% | |
!! | GATTTGTTGGTGCTTTCTCT+TGG | + | chr2_2:15794112-15794131 | Msa0240540:CDS | 40.0% |
! | TTGGTGCTTTCTCTTGGTAA+CGG | + | chr2_2:15794118-15794137 | Msa0240540:CDS | 40.0% |
TGAATCGGTGGTTACTAGTT+AGG | + | chr2_2:15794355-15794374 | Msa0240540:intron | 40.0% | |
GGTTGATCAAGCTGTATCAA+TGG | + | chr2_2:15794547-15794566 | Msa0240540:intron | 40.0% | |
CAAGCTGTATCAATGGCATT+TGG | + | chr2_2:15794554-15794573 | Msa0240540:CDS | 40.0% | |
TGTGCGGATTCAATCAAATG+GGG | + | chr2_2:15794598-15794617 | Msa0240540:CDS | 40.0% | |
GATTCAATCAAATGGGGTGA+TGG | + | chr2_2:15794604-15794623 | Msa0240540:CDS | 40.0% | |
GTGATGGCTAAGGTAAACAA+AGG | + | chr2_2:15794620-15794639 | Msa0240540:CDS | 40.0% | |
AAGGTAAACAAAGGGAAGAC+GGG | + | chr2_2:15794629-15794648 | Msa0240540:CDS | 40.0% | |
! | GTTTGGTGGAGAGTTGATTA+AGG | + | chr2_2:15794772-15794791 | Msa0240540:CDS | 40.0% |
CCATTCTTCAACACAACAGT+TGG | - | chr2_2:15794827-15794846 | None:intergenic | 40.0% | |
CCAACTGTTGTGTTGAAGAA+TGG | + | chr2_2:15794824-15794843 | Msa0240540:CDS | 40.0% | |
TCCTAGGAGATGAAGTTCTA+GGG | - | chr2_2:15794859-15794878 | None:intergenic | 40.0% | |
GCAGAGAATTCTGACTTTCC+CGG | - | chr2_2:15793468-15793487 | None:intergenic | 45.0% | |
TGTTACCGGATTTACGTCTG+AGG | - | chr2_2:15793556-15793575 | None:intergenic | 45.0% | |
! | CTTTTCACCCGTGGAAAAGA+CGG | + | chr2_2:15793647-15793666 | Msa0240540:CDS | 45.0% |
AACAGAATTTCGCGACGATC+GGG | + | chr2_2:15793722-15793741 | Msa0240540:CDS | 45.0% | |
TTTCCGGTGAAAAAACTCGC+CGG | - | chr2_2:15793754-15793773 | None:intergenic | 45.0% | |
TTCAATTCAATAGGAGCCGC+TGG | - | chr2_2:15793965-15793984 | None:intergenic | 45.0% | |
ACGAAGATCTTAGCCGTTGA+TGG | + | chr2_2:15794001-15794020 | Msa0240540:CDS | 45.0% | |
! | AAGATCTTAGCCGTTGATGG+AGG | + | chr2_2:15794004-15794023 | Msa0240540:CDS | 45.0% |
!! | TTCTCTTGGTAACGGAGAGT+TGG | + | chr2_2:15794126-15794145 | Msa0240540:CDS | 45.0% |
GAAACCTGAGGGAGACTTAA+CGG | - | chr2_2:15794161-15794180 | None:intergenic | 45.0% | |
GCAATTCTCACGAAACCTGA+GGG | - | chr2_2:15794172-15794191 | None:intergenic | 45.0% | |
TCAGGTTTCGTGAGAATTGC+CGG | + | chr2_2:15794172-15794191 | Msa0240540:CDS | 45.0% | |
! | ATCAAATGGGGTGATGGCTA+AGG | + | chr2_2:15794610-15794629 | Msa0240540:CDS | 45.0% |
AGGTAAACAAAGGGAAGACG+GGG | + | chr2_2:15794630-15794649 | Msa0240540:CDS | 45.0% | |
GAAAACCACATCGGATTTGG+TGG | + | chr2_2:15794652-15794671 | Msa0240540:CDS | 45.0% | |
! | CCTAGGAGATGAAGTTCTAG+GGG | - | chr2_2:15794858-15794877 | None:intergenic | 45.0% |
GTCCTAGGAGATGAAGTTCT+AGG | - | chr2_2:15794860-15794879 | None:intergenic | 45.0% | |
GTAGTAGCTGATGAAGTCCT+AGG | - | chr2_2:15794875-15794894 | None:intergenic | 45.0% | |
GCAGAGAATTCTGACTTTCC+CGG | - | chr2_2:15793468-15793487 | None:intergenic | 45.0% | |
TGTTACCGGATTTACGTCTG+AGG | - | chr2_2:15793556-15793575 | None:intergenic | 45.0% | |
! | CTTTTCACCCGTGGAAAAGA+CGG | + | chr2_2:15793647-15793666 | Msa0240540:CDS | 45.0% |
AACAGAATTTCGCGACGATC+GGG | + | chr2_2:15793722-15793741 | Msa0240540:CDS | 45.0% | |
TTTCCGGTGAAAAAACTCGC+CGG | - | chr2_2:15793754-15793773 | None:intergenic | 45.0% | |
TTCAATTCAATAGGAGCCGC+TGG | - | chr2_2:15793965-15793984 | None:intergenic | 45.0% | |
ACGAAGATCTTAGCCGTTGA+TGG | + | chr2_2:15794001-15794020 | Msa0240540:CDS | 45.0% | |
! | AAGATCTTAGCCGTTGATGG+AGG | + | chr2_2:15794004-15794023 | Msa0240540:CDS | 45.0% |
!! | TTCTCTTGGTAACGGAGAGT+TGG | + | chr2_2:15794126-15794145 | Msa0240540:CDS | 45.0% |
GAAACCTGAGGGAGACTTAA+CGG | - | chr2_2:15794161-15794180 | None:intergenic | 45.0% | |
GCAATTCTCACGAAACCTGA+GGG | - | chr2_2:15794172-15794191 | None:intergenic | 45.0% | |
TCAGGTTTCGTGAGAATTGC+CGG | + | chr2_2:15794172-15794191 | Msa0240540:CDS | 45.0% | |
! | ATCAAATGGGGTGATGGCTA+AGG | + | chr2_2:15794610-15794629 | Msa0240540:CDS | 45.0% |
AGGTAAACAAAGGGAAGACG+GGG | + | chr2_2:15794630-15794649 | Msa0240540:CDS | 45.0% | |
GAAAACCACATCGGATTTGG+TGG | + | chr2_2:15794652-15794671 | Msa0240540:CDS | 45.0% | |
! | CCTAGGAGATGAAGTTCTAG+GGG | - | chr2_2:15794858-15794877 | None:intergenic | 45.0% |
GTCCTAGGAGATGAAGTTCT+AGG | - | chr2_2:15794860-15794879 | None:intergenic | 45.0% | |
GTAGTAGCTGATGAAGTCCT+AGG | - | chr2_2:15794875-15794894 | None:intergenic | 45.0% | |
AAACAAGCCAAAAACGCCGC+CGG | + | chr2_2:15793446-15793465 | Msa0240540:CDS | 50.0% | |
GAGAATTCTGACTTTCCCGG+CGG | - | chr2_2:15793465-15793484 | None:intergenic | 50.0% | |
! | TACGTCTGAGGCAGGATTCA+AGG | - | chr2_2:15793544-15793563 | None:intergenic | 50.0% |
TCCTGCCTCAGACGTAAATC+CGG | + | chr2_2:15793548-15793567 | Msa0240540:CDS | 50.0% | |
! | CGTCTTTTCCACGGGTGAAA+AGG | - | chr2_2:15793649-15793668 | None:intergenic | 50.0% |
! | AGGTAGTCCGTCTTTTCCAC+GGG | - | chr2_2:15793657-15793676 | None:intergenic | 50.0% |
! | GAGGTAGTCCGTCTTTTCCA+CGG | - | chr2_2:15793658-15793677 | None:intergenic | 50.0% |
ACAGAATTTCGCGACGATCG+GGG | + | chr2_2:15793723-15793742 | Msa0240540:CDS | 50.0% | |
!!! | TCTCCGGCGAGTTTTTTCAC+CGG | + | chr2_2:15793748-15793767 | Msa0240540:CDS | 50.0% |
GATCTTCGTCTTCCCATCGA+TGG | - | chr2_2:15793990-15794009 | None:intergenic | 50.0% | |
CATCGCAACACCTCCATCAA+CGG | - | chr2_2:15794017-15794036 | None:intergenic | 50.0% | |
TGAGTAACAGCAGTAGCCGT+TGG | - | chr2_2:15794046-15794065 | None:intergenic | 50.0% | |
GGCAATTCTCACGAAACCTG+AGG | - | chr2_2:15794173-15794192 | None:intergenic | 50.0% | |
TTCGTGAGAATTGCCGGTGA+AGG | + | chr2_2:15794178-15794197 | Msa0240540:CDS | 50.0% | |
CATATCGGAAGCTCCTTCAC+CGG | - | chr2_2:15794194-15794213 | None:intergenic | 50.0% | |
GAAGACGGGGAAAACCACAT+CGG | + | chr2_2:15794643-15794662 | Msa0240540:CDS | 50.0% | |
GGGGAAAACCACATCGGATT+TGG | + | chr2_2:15794649-15794668 | Msa0240540:CDS | 50.0% | |
!! | AACCACATCGGATTTGGTGG+CGG | + | chr2_2:15794655-15794674 | Msa0240540:CDS | 50.0% |
!! | ATCGGATTTGGTGGCGGTTT+CGG | + | chr2_2:15794661-15794680 | Msa0240540:CDS | 50.0% |
!! | GGAGATGAAGTTCTAGGGGA+GGG | - | chr2_2:15794854-15794873 | None:intergenic | 50.0% |
!! | AGGAGATGAAGTTCTAGGGG+AGG | - | chr2_2:15794855-15794874 | None:intergenic | 50.0% |
CCCCTAGAACTTCATCTCCT+AGG | + | chr2_2:15794855-15794874 | Msa0240540:CDS | 50.0% | |
GGATTCAACACTGCACAGCT+TGG | - | chr2_2:15795086-15795105 | None:intergenic | 50.0% | |
AAACAAGCCAAAAACGCCGC+CGG | + | chr2_2:15793446-15793465 | Msa0240540:CDS | 50.0% | |
GAGAATTCTGACTTTCCCGG+CGG | - | chr2_2:15793465-15793484 | None:intergenic | 50.0% | |
! | TACGTCTGAGGCAGGATTCA+AGG | - | chr2_2:15793544-15793563 | None:intergenic | 50.0% |
TCCTGCCTCAGACGTAAATC+CGG | + | chr2_2:15793548-15793567 | Msa0240540:CDS | 50.0% | |
! | CGTCTTTTCCACGGGTGAAA+AGG | - | chr2_2:15793649-15793668 | None:intergenic | 50.0% |
! | AGGTAGTCCGTCTTTTCCAC+GGG | - | chr2_2:15793657-15793676 | None:intergenic | 50.0% |
! | GAGGTAGTCCGTCTTTTCCA+CGG | - | chr2_2:15793658-15793677 | None:intergenic | 50.0% |
ACAGAATTTCGCGACGATCG+GGG | + | chr2_2:15793723-15793742 | Msa0240540:CDS | 50.0% | |
!!! | TCTCCGGCGAGTTTTTTCAC+CGG | + | chr2_2:15793748-15793767 | Msa0240540:CDS | 50.0% |
GATCTTCGTCTTCCCATCGA+TGG | - | chr2_2:15793990-15794009 | None:intergenic | 50.0% | |
CATCGCAACACCTCCATCAA+CGG | - | chr2_2:15794017-15794036 | None:intergenic | 50.0% | |
TGAGTAACAGCAGTAGCCGT+TGG | - | chr2_2:15794046-15794065 | None:intergenic | 50.0% | |
GGCAATTCTCACGAAACCTG+AGG | - | chr2_2:15794173-15794192 | None:intergenic | 50.0% | |
TTCGTGAGAATTGCCGGTGA+AGG | + | chr2_2:15794178-15794197 | Msa0240540:CDS | 50.0% | |
CATATCGGAAGCTCCTTCAC+CGG | - | chr2_2:15794194-15794213 | None:intergenic | 50.0% | |
GAAGACGGGGAAAACCACAT+CGG | + | chr2_2:15794643-15794662 | Msa0240540:CDS | 50.0% | |
GGGGAAAACCACATCGGATT+TGG | + | chr2_2:15794649-15794668 | Msa0240540:CDS | 50.0% | |
!! | AACCACATCGGATTTGGTGG+CGG | + | chr2_2:15794655-15794674 | Msa0240540:CDS | 50.0% |
!! | ATCGGATTTGGTGGCGGTTT+CGG | + | chr2_2:15794661-15794680 | Msa0240540:CDS | 50.0% |
!! | GGAGATGAAGTTCTAGGGGA+GGG | - | chr2_2:15794854-15794873 | None:intergenic | 50.0% |
!! | AGGAGATGAAGTTCTAGGGG+AGG | - | chr2_2:15794855-15794874 | None:intergenic | 50.0% |
CCCCTAGAACTTCATCTCCT+AGG | + | chr2_2:15794855-15794874 | Msa0240540:CDS | 50.0% | |
GGATTCAACACTGCACAGCT+TGG | - | chr2_2:15795086-15795105 | None:intergenic | 50.0% | |
AACAAGCCAAAAACGCCGCC+GGG | + | chr2_2:15793447-15793466 | Msa0240540:CDS | 55.0% | |
! | ATTCTCTGCATTGACGGCGC+CGG | + | chr2_2:15793479-15793498 | Msa0240540:CDS | 55.0% |
GAGATAGTGATTTCGCGGCG+AGG | - | chr2_2:15793520-15793539 | None:intergenic | 55.0% | |
! | ACCGGATTTACGTCTGAGGC+AGG | - | chr2_2:15793552-15793571 | None:intergenic | 55.0% |
!!! | GATTTTTTCGACGCCGTCGC+CGG | + | chr2_2:15793593-15793612 | Msa0240540:CDS | 55.0% |
GCTTCATCGGCAGTGAACAG+AGG | - | chr2_2:15793677-15793696 | None:intergenic | 55.0% | |
!! | ACCGTCGATTTCGAGAGCGT+CGG | - | chr2_2:15793897-15793916 | None:intergenic | 55.0% |
AACGCCGTTAAGTCTCCCTC+AGG | + | chr2_2:15794154-15794173 | Msa0240540:CDS | 55.0% | |
CGGTGAAGGAGCTTCCGATA+TGG | + | chr2_2:15794192-15794211 | Msa0240540:CDS | 55.0% | |
AACCGCCACCAAATCCGATG+TGG | - | chr2_2:15794660-15794679 | None:intergenic | 55.0% | |
AACAAGCCAAAAACGCCGCC+GGG | + | chr2_2:15793447-15793466 | Msa0240540:CDS | 55.0% | |
! | ATTCTCTGCATTGACGGCGC+CGG | + | chr2_2:15793479-15793498 | Msa0240540:CDS | 55.0% |
GAGATAGTGATTTCGCGGCG+AGG | - | chr2_2:15793520-15793539 | None:intergenic | 55.0% | |
! | ACCGGATTTACGTCTGAGGC+AGG | - | chr2_2:15793552-15793571 | None:intergenic | 55.0% |
!!! | GATTTTTTCGACGCCGTCGC+CGG | + | chr2_2:15793593-15793612 | Msa0240540:CDS | 55.0% |
GCTTCATCGGCAGTGAACAG+AGG | - | chr2_2:15793677-15793696 | None:intergenic | 55.0% | |
!! | ACCGTCGATTTCGAGAGCGT+CGG | - | chr2_2:15793897-15793916 | None:intergenic | 55.0% |
AACGCCGTTAAGTCTCCCTC+AGG | + | chr2_2:15794154-15794173 | Msa0240540:CDS | 55.0% | |
CGGTGAAGGAGCTTCCGATA+TGG | + | chr2_2:15794192-15794211 | Msa0240540:CDS | 55.0% | |
AACCGCCACCAAATCCGATG+TGG | - | chr2_2:15794660-15794679 | None:intergenic | 55.0% | |
! | GACTTTCCCGGCGGCGTTTT+TGG | - | chr2_2:15793456-15793475 | None:intergenic | 60.0% |
GAGGATGCCGTCGGTGTAAC+CGG | - | chr2_2:15793501-15793520 | None:intergenic | 60.0% | |
AGCGAGAACACCACCGACAC+CGG | - | chr2_2:15793621-15793640 | None:intergenic | 60.0% | |
! | GCTGCACTCCTTTTCACCCG+TGG | + | chr2_2:15793638-15793657 | Msa0240540:CDS | 60.0% |
CGCGTGACGAGATCGTAGCA+GGG | - | chr2_2:15793851-15793870 | None:intergenic | 60.0% | |
TCGGCGCGGGAGAAAACGAA+CGG | - | chr2_2:15793878-15793897 | None:intergenic | 60.0% | |
GCCGACGCTCTCGAAATCGA+CGG | + | chr2_2:15793893-15793912 | Msa0240540:CDS | 60.0% | |
TGCCACGTCAGCTGATCCAG+CGG | + | chr2_2:15793946-15793965 | Msa0240540:CDS | 60.0% | |
!! | GGATTTGGTGGCGGTTTCGG+AGG | + | chr2_2:15794664-15794683 | Msa0240540:CDS | 60.0% |
GGCGGTTTCGGAGGAGATGT+TGG | + | chr2_2:15794673-15794692 | Msa0240540:CDS | 60.0% | |
! | GACTTTCCCGGCGGCGTTTT+TGG | - | chr2_2:15793456-15793475 | None:intergenic | 60.0% |
GAGGATGCCGTCGGTGTAAC+CGG | - | chr2_2:15793501-15793520 | None:intergenic | 60.0% | |
AGCGAGAACACCACCGACAC+CGG | - | chr2_2:15793621-15793640 | None:intergenic | 60.0% | |
! | GCTGCACTCCTTTTCACCCG+TGG | + | chr2_2:15793638-15793657 | Msa0240540:CDS | 60.0% |
CGCGTGACGAGATCGTAGCA+GGG | - | chr2_2:15793851-15793870 | None:intergenic | 60.0% | |
TCGGCGCGGGAGAAAACGAA+CGG | - | chr2_2:15793878-15793897 | None:intergenic | 60.0% | |
GCCGACGCTCTCGAAATCGA+CGG | + | chr2_2:15793893-15793912 | Msa0240540:CDS | 60.0% | |
TGCCACGTCAGCTGATCCAG+CGG | + | chr2_2:15793946-15793965 | Msa0240540:CDS | 60.0% | |
!! | GGATTTGGTGGCGGTTTCGG+AGG | + | chr2_2:15794664-15794683 | Msa0240540:CDS | 60.0% |
GGCGGTTTCGGAGGAGATGT+TGG | + | chr2_2:15794673-15794692 | Msa0240540:CDS | 60.0% | |
TTTCGCGGCGAGGATGCCGT+CGG | - | chr2_2:15793510-15793529 | None:intergenic | 65.0% | |
AACACCACCGACACCGGAGC+CGG | - | chr2_2:15793615-15793634 | None:intergenic | 65.0% | |
CGCGACGATCGGGGATTCTC+CGG | + | chr2_2:15793732-15793751 | Msa0240540:CDS | 65.0% | |
GCGCGTGACGAGATCGTAGC+AGG | - | chr2_2:15793852-15793871 | None:intergenic | 65.0% | |
!! | GATTTCGAGAGCGTCGGCGC+GGG | - | chr2_2:15793891-15793910 | None:intergenic | 65.0% |
!! | CGATTTCGAGAGCGTCGGCG+CGG | - | chr2_2:15793892-15793911 | None:intergenic | 65.0% |
AGCCGCTGGATCAGCTGACG+TGG | - | chr2_2:15793951-15793970 | None:intergenic | 65.0% | |
TTTCGCGGCGAGGATGCCGT+CGG | - | chr2_2:15793510-15793529 | None:intergenic | 65.0% | |
AACACCACCGACACCGGAGC+CGG | - | chr2_2:15793615-15793634 | None:intergenic | 65.0% | |
CGCGACGATCGGGGATTCTC+CGG | + | chr2_2:15793732-15793751 | Msa0240540:CDS | 65.0% | |
GCGCGTGACGAGATCGTAGC+AGG | - | chr2_2:15793852-15793871 | None:intergenic | 65.0% | |
!! | GATTTCGAGAGCGTCGGCGC+GGG | - | chr2_2:15793891-15793910 | None:intergenic | 65.0% |
!! | CGATTTCGAGAGCGTCGGCG+CGG | - | chr2_2:15793892-15793911 | None:intergenic | 65.0% |
AGCCGCTGGATCAGCTGACG+TGG | - | chr2_2:15793951-15793970 | None:intergenic | 65.0% | |
!! | GACGGCGCCGGTTACACCGA+CGG | + | chr2_2:15793491-15793510 | Msa0240540:CDS | 70.0% |
!! | GACGGCGCCGGTTACACCGA+CGG | + | chr2_2:15793491-15793510 | Msa0240540:CDS | 70.0% |
!! | TTCGACGCCGTCGCCGGCTC+CGG | + | chr2_2:15793599-15793618 | Msa0240540:CDS | 75.0% |
ACCGACACCGGAGCCGGCGA+CGG | - | chr2_2:15793609-15793628 | None:intergenic | 75.0% | |
!! | TTCGACGCCGTCGCCGGCTC+CGG | + | chr2_2:15793599-15793618 | Msa0240540:CDS | 75.0% |
ACCGACACCGGAGCCGGCGA+CGG | - | chr2_2:15793609-15793628 | None:intergenic | 75.0% | |
!!! | GCCGTCGCCGGCTCCGGTGT+CGG | + | chr2_2:15793605-15793624 | Msa0240540:CDS | 80.0% |
!!! | GTCGCCGGCTCCGGTGTCGG+TGG | + | chr2_2:15793608-15793627 | Msa0240540:CDS | 80.0% |
!!! | GCCGTCGCCGGCTCCGGTGT+CGG | + | chr2_2:15793605-15793624 | Msa0240540:CDS | 80.0% |
!!! | GTCGCCGGCTCCGGTGTCGG+TGG | + | chr2_2:15793608-15793627 | Msa0240540:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 15793162 | 15795360 | 15793162 | ID=Msa0240540;Name=Msa0240540 |
chr2_2 | mRNA | 15793162 | 15795360 | 15793162 | ID=Msa0240540-mRNA-1;Parent=Msa0240540;Name=Msa0240540-mRNA-1;_AED=0.00;_eAED=0.00;_QI=110|1|1|1|1|1|2|438|438 |
chr2_2 | exon | 15793162 | 15794213 | 15793162 | ID=Msa0240540-mRNA-1:exon:6481;Parent=Msa0240540-mRNA-1 |
chr2_2 | exon | 15794548 | 15795360 | 15794548 | ID=Msa0240540-mRNA-1:exon:6482;Parent=Msa0240540-mRNA-1 |
chr2_2 | five_prime_UTR | 15793162 | 15793271 | 15793162 | ID=Msa0240540-mRNA-1:five_prime_utr;Parent=Msa0240540-mRNA-1 |
chr2_2 | CDS | 15793272 | 15794213 | 15793272 | ID=Msa0240540-mRNA-1:cds;Parent=Msa0240540-mRNA-1 |
chr2_2 | CDS | 15794548 | 15794922 | 15794548 | ID=Msa0240540-mRNA-1:cds;Parent=Msa0240540-mRNA-1 |
chr2_2 | three_prime_UTR | 15794923 | 15795360 | 15794923 | ID=Msa0240540-mRNA-1:three_prime_utr;Parent=Msa0240540-mRNA-1 |
Gene Sequence |
Protein sequence |