Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0195230 | XP_013463000.1 | 96.811 | 439 | 12 | 1 | 1 | 437 | 1 | 439 | 0.0 | 858 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0195230 | sp|Q9SV43|PLP7_ARATH | 48.630 | 438 | 196 | 7 | 2 | 412 | 32 | 467 | 2.18e-134 | 398 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0195230 | A0A072VFU2 | 96.811 | 439 | 12 | 1 | 1 | 437 | 1 | 439 | 0.0 | 858 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001800 | Msa0195230 | 0.838976 | 2.087447e-57 | -8.615850e-47 |
Msa0013270 | Msa0195230 | 0.812527 | 4.053730e-51 | -8.615850e-47 |
Msa0022400 | Msa0195230 | 0.839926 | 1.183198e-57 | -8.615850e-47 |
Msa0035730 | Msa0195230 | 0.804994 | 1.653855e-49 | -8.615850e-47 |
Msa0036810 | Msa0195230 | 0.801714 | 7.902239e-49 | -8.615850e-47 |
Msa0039750 | Msa0195230 | 0.814796 | 1.283776e-51 | -8.615850e-47 |
Msa0045810 | Msa0195230 | 0.819990 | 8.686470e-53 | -8.615850e-47 |
Msa0046200 | Msa0195230 | 0.813254 | 2.809530e-51 | -8.615850e-47 |
Msa0046970 | Msa0195230 | 0.811560 | 6.585987e-51 | -8.615850e-47 |
Msa0074360 | Msa0195230 | 0.802943 | 4.412437e-49 | -8.615850e-47 |
Msa0079880 | Msa0195230 | 0.812554 | 3.998449e-51 | -8.615850e-47 |
Msa0106540 | Msa0195230 | 0.801187 | 1.013687e-48 | -8.615850e-47 |
Msa0118150 | Msa0195230 | 0.813964 | 1.960050e-51 | -8.615850e-47 |
Msa0124910 | Msa0195230 | 0.808638 | 2.806882e-50 | -8.615850e-47 |
Msa0139500 | Msa0195230 | 0.813073 | 3.077931e-51 | -8.615850e-47 |
Msa0142430 | Msa0195230 | 0.811960 | 5.388888e-51 | -8.615850e-47 |
Msa0143590 | Msa0195230 | 0.814937 | 1.194569e-51 | -8.615850e-47 |
Msa0166180 | Msa0195230 | 0.804388 | 2.212090e-49 | -8.615850e-47 |
Msa0169410 | Msa0195230 | 0.826037 | 3.379828e-54 | -8.615850e-47 |
Msa0173250 | Msa0195230 | 0.814428 | 1.548497e-51 | -8.615850e-47 |
Msa0183710 | Msa0195230 | 0.811595 | 6.470598e-51 | -8.615850e-47 |
Msa0192250 | Msa0195230 | 0.816868 | 4.429237e-52 | -8.615850e-47 |
Msa0195230 | Msa0195260 | 0.997361 | 3.461586e-241 | -8.615850e-47 |
Msa0195230 | Msa0197140 | 0.800824 | 1.202121e-48 | -8.615850e-47 |
Msa0195230 | Msa0203080 | 0.843311 | 1.515275e-58 | -8.615850e-47 |
Msa0195230 | Msa0204950 | 0.815426 | 9.303520e-52 | -8.615850e-47 |
Msa0195230 | Msa0234170 | 0.847724 | 9.646753e-60 | -8.615850e-47 |
Msa0195230 | Msa0240540 | 0.893032 | 9.161778e-75 | -8.615850e-47 |
Msa0195230 | Msa0246210 | 0.813193 | 2.896719e-51 | -8.615850e-47 |
Msa0195230 | Msa0249850 | 0.819827 | 9.468073e-53 | -8.615850e-47 |
Msa0195230 | Msa0276850 | 0.818436 | 1.962149e-52 | -8.615850e-47 |
Msa0195230 | Msa0276860 | 0.849828 | 2.516991e-60 | -8.615850e-47 |
Msa0195230 | Msa0279000 | 0.963394 | 4.959105e-122 | -8.615850e-47 |
Msa0195230 | Msa0290800 | 0.809092 | 2.244693e-50 | -8.615850e-47 |
Msa0195230 | Msa0307430 | 0.802515 | 5.409632e-49 | -8.615850e-47 |
Msa0195230 | Msa0318410 | 0.840174 | 1.018945e-57 | -8.615850e-47 |
Msa0195230 | Msa0320600 | 0.817767 | 2.779605e-52 | -8.615850e-47 |
Msa0195230 | Msa0326710 | 0.804395 | 2.205544e-49 | -8.615850e-47 |
Msa0195230 | Msa0330520 | 0.800574 | 1.352342e-48 | -8.615850e-47 |
Msa0195230 | Msa0354840 | 0.822129 | 2.793595e-53 | -8.615850e-47 |
Msa0195230 | Msa0368640 | 0.857492 | 1.572729e-62 | -8.615850e-47 |
Msa0195230 | Msa0386880 | 0.836118 | 1.128318e-56 | -8.615850e-47 |
Msa0195230 | Msa0388210 | 0.809718 | 1.647187e-50 | -8.615850e-47 |
Msa0195230 | Msa0389690 | 0.852998 | 3.194074e-61 | -8.615850e-47 |
Msa0195230 | Msa0402770 | 0.855224 | 7.282094e-62 | -8.615850e-47 |
Msa0195230 | Msa0416020 | 0.810333 | 1.214386e-50 | -8.615850e-47 |
Msa0195230 | Msa0427420 | 0.820891 | 5.397409e-53 | -8.615850e-47 |
Msa0195230 | Msa0427480 | 0.820167 | 7.914951e-53 | -8.615850e-47 |
Msa0195230 | Msa0433630 | 0.825143 | 5.504040e-54 | -8.615850e-47 |
Msa0195230 | Msa0437480 | 0.807599 | 4.671628e-50 | -8.615850e-47 |
Msa0195230 | Msa0440350 | 0.814304 | 1.649495e-51 | -8.615850e-47 |
Msa0195230 | Msa0447870 | 0.810642 | 1.041370e-50 | -8.615850e-47 |
Msa0195230 | Msa0458100 | 0.838794 | 2.326666e-57 | -8.615850e-47 |
Msa0195230 | Msa0466440 | 0.806923 | 6.496829e-50 | -8.615850e-47 |
Msa0195230 | Msa0477480 | 0.806288 | 8.847147e-50 | -8.615850e-47 |
Msa0195230 | Msa0480280 | 0.832630 | 8.469213e-56 | -8.615850e-47 |
Msa0195230 | Msa0481670 | 0.804943 | 1.694782e-49 | -8.615850e-47 |
Msa0195230 | Msa0484210 | -0.813207 | 2.876163e-51 | -8.615850e-47 |
Msa0195230 | Msa0506750 | 0.839533 | 1.496908e-57 | -8.615850e-47 |
Msa0195230 | Msa0508180 | 0.811061 | 8.451395e-51 | -8.615850e-47 |
Msa0195230 | Msa0513640 | 0.824522 | 7.710574e-54 | -8.615850e-47 |
Msa0195230 | Msa0514500 | 0.802856 | 4.600214e-49 | -8.615850e-47 |
Msa0195230 | Msa0521510 | 0.832110 | 1.139817e-55 | -8.615850e-47 |
Msa0195230 | Msa0521530 | 0.833535 | 5.042953e-56 | -8.615850e-47 |
Msa0195230 | Msa0525880 | 0.812685 | 3.744341e-51 | -8.615850e-47 |
Msa0195230 | Msa0545920 | 0.807572 | 4.734331e-50 | -8.615850e-47 |
Msa0195230 | Msa0567330 | 0.804483 | 2.113565e-49 | -8.615850e-47 |
Msa0195230 | Msa0567610 | 0.843105 | 1.719338e-58 | -8.615850e-47 |
Msa0195230 | Msa0574900 | 0.839806 | 1.270836e-57 | -8.615850e-47 |
Msa0195230 | Msa0576320 | 0.804818 | 1.799248e-49 | -8.615850e-47 |
Msa0195230 | Msa0579080 | 0.828338 | 9.504959e-55 | -8.615850e-47 |
Msa0195230 | Msa0579160 | 0.816838 | 4.499534e-52 | -8.615850e-47 |
Msa0195230 | Msa0579220 | 0.816851 | 4.467436e-52 | -8.615850e-47 |
Msa0195230 | Msa0601380 | 0.807146 | 5.828042e-50 | -8.615850e-47 |
Msa0195230 | Msa0601720 | 0.809012 | 2.335280e-50 | -8.615850e-47 |
Msa0195230 | Msa0605530 | 0.869080 | 4.048478e-66 | -8.615850e-47 |
Msa0195230 | Msa0608820 | 0.820197 | 7.789751e-53 | -8.615850e-47 |
Msa0195230 | Msa0610690 | 0.803970 | 2.703992e-49 | -8.615850e-47 |
Msa0195230 | Msa0610700 | -0.818301 | 2.105040e-52 | -8.615850e-47 |
Msa0195230 | Msa0617940 | 0.821872 | 3.204303e-53 | -8.615850e-47 |
Msa0195230 | Msa0618840 | 0.810119 | 1.350609e-50 | -8.615850e-47 |
Msa0195230 | Msa0618990 | 0.819134 | 1.362271e-52 | -8.615850e-47 |
Msa0195230 | Msa0619750 | 0.800920 | 1.149343e-48 | -8.615850e-47 |
Msa0195230 | Msa0630440 | 0.830780 | 2.421619e-55 | -8.615850e-47 |
Msa0195230 | Msa0641990 | 0.802627 | 5.129819e-49 | -8.615850e-47 |
Msa0195230 | Msa0642550 | 0.835067 | 2.082412e-56 | -8.615850e-47 |
Msa0195230 | Msa0648040 | 0.808314 | 3.291119e-50 | -8.615850e-47 |
Msa0195230 | Msa0661480 | 0.805911 | 1.062266e-49 | -8.615850e-47 |
Msa0195230 | Msa0681050 | 0.808920 | 2.443537e-50 | -8.615850e-47 |
Msa0195230 | Msa0689660 | 0.813379 | 2.637497e-51 | -8.615850e-47 |
Msa0195230 | Msa0689830 | 0.848160 | 7.316141e-60 | -8.615850e-47 |
Msa0195230 | Msa0690740 | 0.806563 | 7.739971e-50 | -8.615850e-47 |
Msa0195230 | Msa0691610 | 0.814142 | 1.790944e-51 | -8.615850e-47 |
Msa0195230 | Msa0692790 | 0.809877 | 1.522676e-50 | -8.615850e-47 |
Msa0195230 | Msa0703950 | 0.836640 | 8.314413e-57 | -8.615850e-47 |
Msa0195230 | Msa0704690 | 0.805329 | 1.407233e-49 | -8.615850e-47 |
Msa0195230 | Msa0707260 | 0.806176 | 9.339120e-50 | -8.615850e-47 |
Msa0195230 | Msa0707360 | 0.843254 | 1.568957e-58 | -8.615850e-47 |
Msa0195230 | Msa0713080 | 0.818703 | 1.706756e-52 | -8.615850e-47 |
Msa0195230 | Msa0716890 | 0.821242 | 4.479617e-53 | -8.615850e-47 |
Msa0195230 | Msa0719270 | 0.803898 | 2.798157e-49 | -8.615850e-47 |
Msa0195230 | Msa0732970 | 0.806285 | 8.861371e-50 | -8.615850e-47 |
Msa0195230 | Msa0745140 | 0.809111 | 2.224086e-50 | -8.615850e-47 |
Msa0195230 | Msa0746650 | 0.862625 | 4.437675e-64 | -8.615850e-47 |
Msa0195230 | Msa0754450 | 0.806691 | 7.275075e-50 | -8.615850e-47 |
Msa0195230 | Msa0772220 | 0.810642 | 1.041532e-50 | -8.615850e-47 |
Msa0195230 | Msa0773960 | 0.836521 | 8.911262e-57 | -8.615850e-47 |
Msa0195230 | Msa0776640 | 0.808549 | 2.933254e-50 | -8.615850e-47 |
Msa0195230 | Msa0799450 | 0.842273 | 2.860572e-58 | -8.615850e-47 |
Msa0195230 | Msa0804170 | 0.806196 | 9.251189e-50 | -8.615850e-47 |
Msa0195230 | Msa0825920 | 0.808599 | 2.861448e-50 | -8.615850e-47 |
Msa0195230 | Msa0827370 | 0.816213 | 6.209983e-52 | -8.615850e-47 |
Msa0195230 | Msa0837710 | 0.866023 | 3.860398e-65 | -8.615850e-47 |
Msa0195230 | Msa0838620 | -0.814442 | 1.537611e-51 | -8.615850e-47 |
Msa0195230 | Msa0846900 | 0.801109 | 1.051435e-48 | -8.615850e-47 |
Msa0195230 | Msa0850690 | 0.813611 | 2.344824e-51 | -8.615850e-47 |
Msa0195230 | Msa0851850 | 0.806558 | 7.759315e-50 | -8.615850e-47 |
Msa0195230 | Msa0861440 | 0.809173 | 2.157127e-50 | -8.615850e-47 |
Msa0195230 | Msa0865420 | 0.813861 | 2.065324e-51 | -8.615850e-47 |
Msa0195230 | Msa0880910 | 0.822570 | 2.207638e-53 | -8.615850e-47 |
Msa0195230 | Msa0903340 | 0.804229 | 2.388162e-49 | -8.615850e-47 |
Msa0195230 | Msa0926310 | 0.801894 | 7.260246e-49 | -8.615850e-47 |
Msa0195230 | Msa0930770 | 0.878249 | 3.270598e-69 | -8.615850e-47 |
Msa0195230 | Msa0945900 | 0.813563 | 2.402888e-51 | -8.615850e-47 |
Msa0195230 | Msa0967780 | 0.830934 | 2.219511e-55 | -8.615850e-47 |
Msa0195230 | Msa0981670 | 0.851619 | 7.887610e-61 | -8.615850e-47 |
Msa0195230 | Msa0982730 | 0.866608 | 2.517371e-65 | -8.615850e-47 |
Msa0195230 | Msa1013190 | 0.816335 | 5.831341e-52 | -8.615850e-47 |
Msa0195230 | Msa1019200 | 0.822270 | 2.591055e-53 | -8.615850e-47 |
Msa0195230 | Msa1021560 | 0.829473 | 5.047637e-55 | -8.615850e-47 |
Msa0195230 | Msa1022420 | 0.823540 | 1.311024e-53 | -8.615850e-47 |
Msa0195230 | Msa1029820 | 0.809166 | 2.164073e-50 | -8.615850e-47 |
Msa0195230 | Msa1029840 | 0.804156 | 2.472931e-49 | -8.615850e-47 |
Msa0195230 | Msa1041170 | 0.835476 | 1.641362e-56 | -8.615850e-47 |
Msa0195230 | Msa1050260 | 0.815879 | 7.374472e-52 | -8.615850e-47 |
Msa0195230 | Msa1068710 | 0.815446 | 9.207706e-52 | -8.615850e-47 |
Msa0195230 | Msa1068940 | 0.814847 | 1.250515e-51 | -8.615850e-47 |
Msa0195230 | Msa1074900 | 0.801097 | 1.057463e-48 | -8.615850e-47 |
Msa0195230 | Msa1078830 | 0.824729 | 6.893340e-54 | -8.615850e-47 |
Msa0195230 | Msa1104110 | 0.802550 | 5.319815e-49 | -8.615850e-47 |
Msa0195230 | Msa1118170 | 0.802952 | 4.394944e-49 | -8.615850e-47 |
Msa0195230 | Msa1119440 | 0.821696 | 3.519771e-53 | -8.615850e-47 |
Msa0195230 | Msa1124210 | 0.833855 | 4.195607e-56 | -8.615850e-47 |
Msa0195230 | Msa1147700 | 0.838830 | 2.277333e-57 | -8.615850e-47 |
Msa0195230 | Msa1148930 | 0.805012 | 1.639621e-49 | -8.615850e-47 |
Msa0195230 | Msa1156710 | 0.806899 | 6.573861e-50 | -8.615850e-47 |
Msa0195230 | Msa1158210 | 0.805885 | 1.075596e-49 | -8.615850e-47 |
Msa0195230 | Msa1168310 | 0.807418 | 5.103934e-50 | -8.615850e-47 |
Msa0195230 | Msa1169660 | 0.822290 | 2.563299e-53 | -8.615850e-47 |
Msa0195230 | Msa1184680 | 0.813799 | 2.131422e-51 | -8.615850e-47 |
Msa0195230 | Msa1190770 | 0.821398 | 4.125148e-53 | -8.615850e-47 |
Msa0195230 | Msa1199850 | 0.824458 | 7.983741e-54 | -8.615850e-47 |
Msa0195230 | Msa1201170 | 0.841286 | 5.211371e-58 | -8.615850e-47 |
Msa0195230 | Msa1201780 | 0.820665 | 6.084179e-53 | -8.615850e-47 |
Msa0195230 | Msa1217890 | 0.805024 | 1.629674e-49 | -8.615850e-47 |
Msa0195230 | Msa1220580 | 0.812767 | 3.592987e-51 | -8.615850e-47 |
Msa0195230 | Msa1226370 | 0.848952 | 4.414257e-60 | -8.615850e-47 |
Msa0195230 | Msa1240940 | 0.815144 | 1.074574e-51 | -8.615850e-47 |
Msa0195230 | Msa1282300 | 0.804273 | 2.338472e-49 | -8.615850e-47 |
Msa0195230 | Msa1294280 | 0.824870 | 6.384904e-54 | -8.615850e-47 |
Msa0195230 | Msa1301820 | 0.803633 | 3.176667e-49 | -8.615850e-47 |
Msa0195230 | Msa1301830 | 0.811056 | 8.473439e-51 | -8.615850e-47 |
Msa0195230 | Msa1322980 | 0.809633 | 1.718225e-50 | -8.615850e-47 |
Msa0195230 | Msa1334560 | 0.810037 | 1.406593e-50 | -8.615850e-47 |
Msa0195230 | Msa1339200 | 0.836107 | 1.135821e-56 | -8.615850e-47 |
Msa0195230 | Msa1342760 | 0.812204 | 4.769570e-51 | -8.615850e-47 |
Msa0195230 | Msa1347390 | 0.869298 | 3.439122e-66 | -8.615850e-47 |
Msa0195230 | Msa1361980 | 0.802608 | 5.174210e-49 | -8.615850e-47 |
Msa0195230 | Msa1361990 | 0.830504 | 2.829125e-55 | -8.615850e-47 |
Msa0195230 | Msa1363010 | 0.829441 | 5.138452e-55 | -8.615850e-47 |
Msa0195230 | Msa1365820 | 0.831067 | 2.058987e-55 | -8.615850e-47 |
Msa0195230 | Msa1368390 | 0.819213 | 1.306771e-52 | -8.615850e-47 |
Msa0195230 | Msa1372000 | 0.802014 | 6.859796e-49 | -8.615850e-47 |
Msa0195230 | Msa1391500 | 0.812324 | 4.489457e-51 | -8.615850e-47 |
Msa0195230 | Msa1396100 | 0.816816 | 4.549588e-52 | -8.615850e-47 |
Msa0195230 | Msa1402010 | 0.817598 | 3.034267e-52 | -8.615850e-47 |
Msa0195230 | Msa1406090 | 0.829924 | 3.921401e-55 | -8.615850e-47 |
Msa0195230 | Msa1407840 | 0.815591 | 8.549096e-52 | -8.615850e-47 |
Msa0195230 | Msa1413020 | 0.802705 | 4.941962e-49 | -8.615850e-47 |
Msa0195230 | Msa1422860 | 0.800488 | 1.407980e-48 | -8.615850e-47 |
Msa0195230 | Msa1426320 | 0.803019 | 4.257155e-49 | -8.615850e-47 |
Msa0195230 | Msa1437810 | 0.813685 | 2.258782e-51 | -8.615850e-47 |
Msa0195230 | Msa1447100 | 0.800478 | 1.414193e-48 | -8.615850e-47 |
Msa0195230 | Msa1454500 | 0.808432 | 3.106930e-50 | -8.615850e-47 |
Msa0195230 | Msa1457770 | 0.827758 | 1.310555e-54 | -8.615850e-47 |
Msa0195230 | Msa1458790 | 0.839344 | 1.676344e-57 | -8.615850e-47 |
Msa0195230 | Msa1462780 | 0.840174 | 1.019055e-57 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0195230 | MtrunA17_Chr2g0292051 | 96.811 | 439 | 12 | 1 | 1 | 437 | 1 | 439 | 0.0 | 858 |
Msa0195230 | MtrunA17_Chr1g0199801 | 45.788 | 463 | 196 | 12 | 9 | 417 | 1 | 462 | 4.44e-133 | 391 |
Msa0195230 | MtrunA17_Chr1g0185551 | 36.697 | 436 | 191 | 10 | 22 | 431 | 1 | 377 | 1.28e-77 | 246 |
Msa0195230 | MtrunA17_Chr7g0259871 | 38.875 | 391 | 190 | 11 | 22 | 394 | 1 | 360 | 6.13e-75 | 239 |
Msa0195230 | MtrunA17_Chr5g0402451 | 30.548 | 347 | 187 | 15 | 67 | 365 | 10 | 350 | 1.76e-27 | 113 |
Msa0195230 | MtrunA17_Chr5g0402441 | 30.857 | 350 | 179 | 17 | 67 | 365 | 16 | 353 | 1.50e-26 | 110 |
Msa0195230 | MtrunA17_Chr1g0153781 | 26.603 | 421 | 238 | 16 | 52 | 420 | 6 | 407 | 1.14e-23 | 102 |
Msa0195230 | MtrunA17_Chr3g0133691 | 28.065 | 367 | 210 | 16 | 84 | 401 | 36 | 397 | 6.73e-23 | 100 |
Msa0195230 | MtrunA17_Chr8g0335591 | 27.913 | 369 | 226 | 17 | 67 | 400 | 32 | 395 | 1.32e-22 | 99.4 |
Msa0195230 | MtrunA17_Chr8g0335581 | 25.455 | 385 | 245 | 13 | 67 | 415 | 21 | 399 | 3.17e-22 | 98.2 |
Msa0195230 | MtrunA17_Chr3g0133681 | 27.100 | 369 | 211 | 17 | 84 | 401 | 36 | 397 | 1.93e-21 | 95.9 |
Msa0195230 | MtrunA17_Chr8g0335611 | 28.649 | 370 | 224 | 15 | 67 | 400 | 32 | 397 | 5.05e-21 | 94.7 |
Msa0195230 | MtrunA17_Chr8g0335621 | 28.378 | 370 | 225 | 15 | 67 | 400 | 63 | 428 | 1.76e-20 | 93.6 |
Msa0195230 | MtrunA17_Chr8g0335631 | 27.507 | 349 | 212 | 13 | 87 | 400 | 51 | 393 | 5.54e-20 | 91.7 |
Msa0195230 | MtrunA17_Chr8g0335651 | 28.070 | 342 | 208 | 14 | 87 | 400 | 52 | 383 | 2.16e-19 | 89.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0195230 | AT3G54950.1 | 48.630 | 438 | 196 | 7 | 2 | 412 | 32 | 467 | 2.21e-135 | 398 |
Msa0195230 | AT2G39220.1 | 47.511 | 442 | 183 | 7 | 19 | 412 | 40 | 480 | 1.35e-130 | 386 |
Msa0195230 | AT4G29800.1 | 42.333 | 463 | 201 | 8 | 15 | 412 | 43 | 504 | 4.59e-113 | 342 |
Msa0195230 | AT4G29800.2 | 42.241 | 464 | 201 | 9 | 15 | 412 | 43 | 505 | 3.58e-111 | 337 |
Msa0195230 | AT3G63200.1 | 42.494 | 393 | 171 | 10 | 22 | 394 | 3 | 360 | 9.41e-87 | 270 |
Msa0195230 | AT4G37060.1 | 30.130 | 385 | 217 | 18 | 67 | 403 | 19 | 399 | 2.83e-28 | 115 |
Msa0195230 | AT2G26560.1 | 29.815 | 379 | 218 | 15 | 67 | 400 | 19 | 394 | 1.38e-25 | 108 |
Msa0195230 | AT4G37070.2 | 28.385 | 384 | 220 | 17 | 67 | 401 | 19 | 396 | 5.56e-24 | 103 |
Msa0195230 | AT4G37060.2 | 27.952 | 415 | 218 | 19 | 67 | 403 | 19 | 430 | 2.24e-23 | 102 |
Msa0195230 | AT4G37070.3 | 28.649 | 370 | 209 | 17 | 67 | 387 | 19 | 382 | 5.63e-23 | 100 |
Msa0195230 | AT4G37070.1 | 28.649 | 370 | 209 | 17 | 67 | 387 | 19 | 382 | 5.63e-23 | 100 |
Msa0195230 | AT4G37050.1 | 28.032 | 371 | 209 | 16 | 87 | 402 | 54 | 421 | 6.50e-23 | 100 |
Msa0195230 | AT5G43590.1 | 27.778 | 288 | 168 | 10 | 87 | 336 | 33 | 318 | 2.09e-20 | 93.2 |
Msa0195230 | AT5G43590.2 | 27.778 | 288 | 168 | 10 | 87 | 336 | 100 | 385 | 4.62e-20 | 92.8 |
Msa0195230 | AT4G37070.4 | 27.297 | 370 | 203 | 17 | 67 | 387 | 19 | 371 | 7.02e-19 | 88.2 |
Find 124 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATACGAAATCTTCTCCATTT+TGG | 0.144885 | 2_1:-12010819 | Msa0195230:CDS |
AACTTAATGTCTTGTGGTTT+TGG | 0.200873 | 2_1:-12009150 | Msa0195230:three_prime_UTR |
GTGTATTGAAACATTGATTA+TGG | 0.206328 | 2_1:-12008867 | Msa0195230:three_prime_UTR |
GTTGAGTCAGTCTTATTTAA+AGG | 0.208877 | 2_1:-12009471 | Msa0195230:CDS |
ATCGGATTTGGTGGCGGTTT+CGG | 0.267788 | 2_1:-12009517 | Msa0195230:CDS |
TTGGAAAACAAATTCTTATT+CGG | 0.286942 | 2_1:-12010800 | Msa0195230:CDS |
TGTATGTTGGTTGTTGAAAA+TGG | 0.288958 | 2_1:+12010997 | None:intergenic |
GATTTCTTCGACGCCGTTGC+TGG | 0.312723 | 2_1:-12010584 | Msa0195230:CDS |
GGTAGGTTGTAGTAATATTA+AGG | 0.321641 | 2_1:+12009070 | None:intergenic |
TTAGACAAATTGAAATTGTT+TGG | 0.328034 | 2_1:-12009423 | Msa0195230:CDS |
GTTTGGTGGAGAGTTGATTA+AGG | 0.342805 | 2_1:-12009406 | Msa0195230:CDS |
GCAGAGAATTCTGACTTTCC+CGG | 0.367032 | 2_1:+12010712 | None:intergenic |
GTCCTAGGAGATGAAGTTCT+AGG | 0.368900 | 2_1:+12009321 | None:intergenic |
TCAGGTTTCGTGAGAATTGC+CGG | 0.370289 | 2_1:-12010005 | Msa0195230:CDS |
AAGAAAAGAGGAAGATTAGT+AGG | 0.373541 | 2_1:-12009236 | Msa0195230:three_prime_UTR |
AACAGAATTTCCCGACGATC+GGG | 0.375905 | 2_1:-12010455 | Msa0195230:CDS |
GGGGAAAACCACATCGGATT+TGG | 0.391408 | 2_1:-12009529 | Msa0195230:CDS |
GAGGATGCCGTCGGTGTAAC+CGG | 0.403495 | 2_1:+12010679 | None:intergenic |
AATATGAGAGTTACTGTTAC+CGG | 0.409853 | 2_1:+12010610 | None:intergenic |
CCAACTGTTGTGTTGAAGAA+TGG | 0.412565 | 2_1:-12009354 | Msa0195230:CDS |
TTCGACGCCGTTGCTGGCTC+CGG | 0.416327 | 2_1:-12010578 | Msa0195230:CDS |
TAACGGTGTTTCTGATTTGT+TGG | 0.422061 | 2_1:-12010078 | Msa0195230:CDS |
AAGTTCAAGTTGTTGTTCAT+TGG | 0.424195 | 2_1:+12010881 | None:intergenic |
TCTTTCTGAGGCAGGATTCA+AGG | 0.424873 | 2_1:+12010636 | None:intergenic |
GATTTGTTGGTGCTTTCTCT+TGG | 0.427963 | 2_1:-12010065 | Msa0195230:CDS |
CAAGCTGTATCAATGGCATT+TGG | 0.428031 | 2_1:-12009624 | Msa0195230:CDS |
TTTCTCACCGGAAACAAAAT+CGG | 0.433911 | 2_1:-12010417 | Msa0195230:CDS |
ACCGGATTTCTTTCTGAGGC+AGG | 0.435141 | 2_1:+12010628 | None:intergenic |
TATGTGCGGATTCAATCAAA+TGG | 0.437366 | 2_1:-12009582 | Msa0195230:CDS |
CGGTGAAGGAGCTTCCGATA+TGG | 0.438606 | 2_1:-12009985 | Msa0195230:intron |
CCCGACGATCGGGGATTCTC+CGG | 0.439862 | 2_1:-12010445 | Msa0195230:CDS |
ACGAAGATCTTAGCCGTTGA+TGG | 0.448292 | 2_1:-12010176 | Msa0195230:CDS |
GTGATAGTGATTTGTTCGTA+TGG | 0.453685 | 2_1:-12008982 | Msa0195230:three_prime_UTR |
GAAACCTGAGGGAGACTTAA+CGG | 0.454179 | 2_1:+12010019 | None:intergenic |
CCGGAGAATCCCCGATCGTC+GGG | 0.457645 | 2_1:+12010445 | None:intergenic |
GAAAGAGAGAATTTGTATGT+TGG | 0.458611 | 2_1:+12010984 | None:intergenic |
TCGTAGCAGGGAATTAAAAT+CGG | 0.459582 | 2_1:+12010341 | None:intergenic |
GCCGTTGCTGGCTCCGGTGT+CGG | 0.460782 | 2_1:-12010572 | Msa0195230:CDS |
TTCGTATGGGTATTGTCAAA+AGG | 0.460883 | 2_1:-12008968 | Msa0195230:three_prime_UTR |
GTCAGAATTCTCTGCATTGA+CGG | 0.462797 | 2_1:-12010704 | Msa0195230:CDS |
GCGCGTGACGAGATCGTAGC+AGG | 0.470309 | 2_1:+12010328 | None:intergenic |
TCCTAGGAGATGAAGTTCTA+GGG | 0.478439 | 2_1:+12009322 | None:intergenic |
AAGGTAAACAAAGGGAAGAC+GGG | 0.479023 | 2_1:-12009549 | Msa0195230:CDS |
GGCGGTTTCGGAGGAGATGT+TGG | 0.485077 | 2_1:-12009505 | Msa0195230:CDS |
GACAAATTGAAATTGTTTGG+TGG | 0.485720 | 2_1:-12009420 | Msa0195230:CDS |
TCGATGGACTTCAATTCAAT+AGG | 0.487410 | 2_1:+12010206 | None:intergenic |
ATGTGCGGATTCAATCAAAT+GGG | 0.488399 | 2_1:-12009581 | Msa0195230:CDS |
TTCAATTCAATAGGAGCCGC+TGG | 0.490050 | 2_1:+12010215 | None:intergenic |
AAATGAAATAATTATAATGT+AGG | 0.494177 | 2_1:+12009049 | None:intergenic |
TTCTCTTGGTAACGGAGAGT+TGG | 0.496512 | 2_1:-12010051 | Msa0195230:CDS |
GAAATAATTATAATGTAGGT+AGG | 0.499493 | 2_1:+12009053 | None:intergenic |
GGTTGTAGTAATATTAAGGA+TGG | 0.505680 | 2_1:+12009074 | None:intergenic |
TGATAGTGATTTGTTCGTAT+GGG | 0.508009 | 2_1:-12008981 | Msa0195230:three_prime_UTR |
TTTACCACGGGTGAAAAGTA+AGG | 0.511204 | 2_1:+12010535 | None:intergenic |
TTGGTGCTTTCTCTTGGTAA+CGG | 0.511918 | 2_1:-12010059 | Msa0195230:CDS |
AACCACATCGGATTTGGTGG+CGG | 0.512460 | 2_1:-12009523 | Msa0195230:CDS |
TAACAGAATTTCCCGACGAT+CGG | 0.515375 | 2_1:-12010456 | Msa0195230:CDS |
GAAAACCACATCGGATTTGG+TGG | 0.517533 | 2_1:-12009526 | Msa0195230:CDS |
GTAGTAGCTGATGAAGTCCT+AGG | 0.521279 | 2_1:+12009306 | None:intergenic |
GGTTGATCAAGCTGTATCAA+TGG | 0.525148 | 2_1:-12009631 | Msa0195230:CDS |
CCCCTAGAACTTCATCTCCT+AGG | 0.526050 | 2_1:-12009323 | Msa0195230:CDS |
AGTTGATTAAGGAAGAAGAG+AGG | 0.528571 | 2_1:-12009395 | Msa0195230:CDS |
TTCGTGAGAATTGCCGGTGA+AGG | 0.529684 | 2_1:-12009999 | Msa0195230:CDS |
ATCAAATGGGGTGATGGCTA+AGG | 0.530306 | 2_1:-12009568 | Msa0195230:CDS |
AACGCCGTTAAGTCTCCCTC+AGG | 0.530840 | 2_1:-12010023 | Msa0195230:CDS |
AGTCAGTCTTATTTAAAGGA+AGG | 0.532895 | 2_1:-12009467 | Msa0195230:CDS |
TCCTGCCTCAGAAAGAAATC+CGG | 0.534121 | 2_1:-12010629 | Msa0195230:CDS |
CCATTCTTCAACACAACAGT+TGG | 0.536757 | 2_1:+12009354 | None:intergenic |
CATATCGGAAGCTCCTTCAC+CGG | 0.540361 | 2_1:+12009986 | None:intergenic |
GCCGGAGAATCCCCGATCGT+CGG | 0.540416 | 2_1:+12010444 | None:intergenic |
GGCGAGGACTCCACCGACAC+CGG | 0.540476 | 2_1:+12010559 | None:intergenic |
ATTCTCTGCATTGACGGCGC+CGG | 0.540611 | 2_1:-12010698 | Msa0195230:CDS |
GATCTTCGTCTTCCCATCGA+TGG | 0.541076 | 2_1:+12010190 | None:intergenic |
TAAGGTAAACAAAGGGAAGA+CGG | 0.544495 | 2_1:-12009550 | Msa0195230:CDS |
GAGTTTATCAACTTCGAAGT+TGG | 0.546260 | 2_1:+12010844 | None:intergenic |
TCAGAAACACCGTTACAAAA+CGG | 0.547389 | 2_1:+12010086 | None:intergenic |
GGATTCAACACTGCACAGCT+CGG | 0.562583 | 2_1:+12009095 | None:intergenic |
GGAGATGAAGTTCTAGGGGA+GGG | 0.565558 | 2_1:+12009327 | None:intergenic |
GATTTCGAGAGCGTCGGCGC+GGG | 0.567460 | 2_1:+12010289 | None:intergenic |
TGAGTAACAGCAGTAGCCGT+TGG | 0.567616 | 2_1:+12010134 | None:intergenic |
GATTCAATCAAATGGGGTGA+TGG | 0.569656 | 2_1:-12009574 | Msa0195230:CDS |
GTTGCTGGCTCCGGTGTCGG+TGG | 0.572413 | 2_1:-12010569 | Msa0195230:CDS |
ACCGACACCGGAGCCAGCAA+CGG | 0.573642 | 2_1:+12010571 | None:intergenic |
CAGAAACTTCAAAGCTTCAT+CGG | 0.575680 | 2_1:+12010490 | None:intergenic |
ATTGAATTGAAGTCCATCGA+TGG | 0.577788 | 2_1:-12010203 | Msa0195230:CDS |
AGCCGCTGGATCAGCTGACG+TGG | 0.581310 | 2_1:+12010229 | None:intergenic |
GACGGCGCCGGTTACACCGA+CGG | 0.582223 | 2_1:-12010686 | Msa0195230:CDS |
GGATTTGGTGGCGGTTTCGG+AGG | 0.583638 | 2_1:-12009514 | Msa0195230:CDS |
AAGGTGAGAGAGTGATTTCG+CGG | 0.586435 | 2_1:+12010655 | None:intergenic |
CATCGCAACACCTCCATCAA+CGG | 0.587463 | 2_1:+12010163 | None:intergenic |
AGGAGATGAAGTTCTAGGGG+AGG | 0.591108 | 2_1:+12009326 | None:intergenic |
TTGAATTGAAGTCCATCGAT+GGG | 0.595371 | 2_1:-12010202 | Msa0195230:CDS |
AGGTAATCCGTCTTTACCAC+GGG | 0.595561 | 2_1:+12010523 | None:intergenic |
TGCCACGTCAGCTGATCCAG+CGG | 0.596623 | 2_1:-12010231 | Msa0195230:CDS |
ACAGAATTTCCCGACGATCG+GGG | 0.599858 | 2_1:-12010454 | Msa0195230:CDS |
ATCGTCGGGAAATTCTGTTA+CGG | 0.601025 | 2_1:+12010459 | None:intergenic |
CTTTCTTAATCGATCTCAAG+CGG | 0.617258 | 2_1:+12009119 | None:intergenic |
CCTAGGAGATGAAGTTCTAG+GGG | 0.628375 | 2_1:+12009323 | None:intergenic |
CGCGTGACGAGATCGTAGCA+GGG | 0.629024 | 2_1:+12010329 | None:intergenic |
AAGATCTTAGCCGTTGATGG+AGG | 0.638110 | 2_1:-12010173 | Msa0195230:CDS |
TTTCGCGGCGAGGATGCCGT+CGG | 0.641184 | 2_1:+12010670 | None:intergenic |
GCAATTCTCACGAAACCTGA+GGG | 0.641382 | 2_1:+12010008 | None:intergenic |
GTAGATTGAACAATTATGTG+CGG | 0.642262 | 2_1:-12009596 | Msa0195230:CDS |
GGCAATTCTCACGAAACCTG+AGG | 0.645971 | 2_1:+12010007 | None:intergenic |
GAGGTAATCCGTCTTTACCA+CGG | 0.646558 | 2_1:+12010522 | None:intergenic |
ACCGTCGATTTCGAGAGCGT+CGG | 0.652715 | 2_1:+12010283 | None:intergenic |
TGTTACCGGATTTCTTTCTG+AGG | 0.653122 | 2_1:+12010624 | None:intergenic |
GTGATGGCTAAGGTAAACAA+AGG | 0.654646 | 2_1:-12009558 | Msa0195230:CDS |
CGATTTCGAGAGCGTCGGCG+CGG | 0.655501 | 2_1:+12010288 | None:intergenic |
TGATGGCTAAGGTAAACAAA+GGG | 0.662128 | 2_1:-12009557 | Msa0195230:CDS |
ATTTAAAGGAAGGAAGATCG+TGG | 0.667169 | 2_1:-12009457 | Msa0195230:CDS |
TCGGCGCGGGAGAAAACGAA+CGG | 0.671166 | 2_1:+12010302 | None:intergenic |
GCCGACGCTCTCGAAATCGA+CGG | 0.676469 | 2_1:-12010284 | Msa0195230:CDS |
GGGTGAAAAGTAAGGCGGCG+AGG | 0.686118 | 2_1:+12010543 | None:intergenic |
GCTTCATCGGCAGTGAACAG+AGG | 0.690278 | 2_1:+12010503 | None:intergenic |
TTTCCGGTGAGAAAACTCGC+CGG | 0.691056 | 2_1:+12010426 | None:intergenic |
AACCGCCACCAAATCCGATG+TGG | 0.694040 | 2_1:+12009521 | None:intergenic |
TGTTGCGATGAACAATCCAA+CGG | 0.695987 | 2_1:-12010150 | Msa0195230:CDS |
ACCACGGGTGAAAAGTAAGG+CGG | 0.698481 | 2_1:+12010538 | None:intergenic |
AGGTAAACAAAGGGAAGACG+GGG | 0.704588 | 2_1:-12009548 | Msa0195230:CDS |
TGTGCGGATTCAATCAAATG+GGG | 0.705308 | 2_1:-12009580 | Msa0195230:CDS |
GAGAGAGTGATTTCGCGGCG+AGG | 0.707647 | 2_1:+12010660 | None:intergenic |
GAGAATTCTGACTTTCCCGG+CGG | 0.726321 | 2_1:+12010715 | None:intergenic |
GAAGACGGGGAAAACCACAT+CGG | 0.743605 | 2_1:-12009535 | Msa0195230:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATGAAATAATTATAATGT+AGG | + | chr2_1:12010808-12010827 | None:intergenic | 10.0% |
!! | AAATGAAATAATTATAATGT+AGG | + | chr2_1:12010808-12010827 | None:intergenic | 10.0% |
!! | AAAATAATTCGAAATTGAAT+CGG | - | chr2_1:12010016-12010035 | Msa0195230:CDS | 15.0% |
!! | ATGAATGAATATTATAATGT+AGG | - | chr2_1:12010202-12010221 | Msa0195230:CDS | 15.0% |
!!! | TAAAAATTAGATTTTGTTGT+GGG | - | chr2_1:12010650-12010669 | Msa0195230:CDS | 15.0% |
!!! | TTTTTATCTTTGTTTAGTTT+TGG | - | chr2_1:12010829-12010848 | Msa0195230:CDS | 15.0% |
!! | AAAATAATTCGAAATTGAAT+CGG | - | chr2_1:12010016-12010035 | Msa0195230:CDS | 15.0% |
!! | ATGAATGAATATTATAATGT+AGG | - | chr2_1:12010202-12010221 | Msa0195230:CDS | 15.0% |
!!! | TAAAAATTAGATTTTGTTGT+GGG | - | chr2_1:12010650-12010669 | Msa0195230:CDS | 15.0% |
!!! | TTTTTATCTTTGTTTAGTTT+TGG | - | chr2_1:12010829-12010848 | Msa0195230:CDS | 15.0% |
!!! | TAAGAATTTGTTTTCCAAAA+TGG | + | chr2_1:12009052-12009071 | None:intergenic | 20.0% |
!! | TTGGAAAACAAATTCTTATT+CGG | - | chr2_1:12009054-12009073 | Msa0195230:three_prime_UTR | 20.0% |
!!! | GAATTTTTTTCTTACCATAT+CGG | + | chr2_1:12009886-12009905 | None:intergenic | 20.0% |
!! | TTAGACAAATTGAAATTGTT+TGG | - | chr2_1:12010431-12010450 | Msa0195230:CDS | 20.0% |
!!! | CTAAAAATTAGATTTTGTTG+TGG | - | chr2_1:12010649-12010668 | Msa0195230:CDS | 20.0% |
!! | GAAATAATTATAATGTAGGT+AGG | + | chr2_1:12010804-12010823 | None:intergenic | 20.0% |
!!! | TAAGAATTTGTTTTCCAAAA+TGG | + | chr2_1:12009052-12009071 | None:intergenic | 20.0% |
!! | TTGGAAAACAAATTCTTATT+CGG | - | chr2_1:12009054-12009073 | Msa0195230:three_prime_UTR | 20.0% |
!!! | GAATTTTTTTCTTACCATAT+CGG | + | chr2_1:12009886-12009905 | None:intergenic | 20.0% |
!! | TTAGACAAATTGAAATTGTT+TGG | - | chr2_1:12010431-12010450 | Msa0195230:CDS | 20.0% |
!!! | CTAAAAATTAGATTTTGTTG+TGG | - | chr2_1:12010649-12010668 | Msa0195230:CDS | 20.0% |
!! | GAAATAATTATAATGTAGGT+AGG | + | chr2_1:12010804-12010823 | None:intergenic | 20.0% |
! | AACTCAAATTGCAGAAAAAA+TGG | - | chr2_1:12008933-12008952 | Msa0195230:three_prime_UTR | 25.0% |
!!! | AGAATGTGTTTGTTTTTGTT+AGG | + | chr2_1:12010078-12010097 | None:intergenic | 25.0% |
! | ATTTGTAGTGAATAATGAGT+AGG | - | chr2_1:12010126-12010145 | Msa0195230:CDS | 25.0% |
! | TAATGAGTAGGTCTAATTAT+TGG | - | chr2_1:12010138-12010157 | Msa0195230:CDS | 25.0% |
! | AAGAAGACAAAAAAGAAAAG+AGG | - | chr2_1:12010606-12010625 | Msa0195230:CDS | 25.0% |
!!! | TTTTGAAACTTAATGTCTTG+TGG | - | chr2_1:12010698-12010717 | Msa0195230:CDS | 25.0% |
!! | GTGTATTGAAACATTGATTA+TGG | - | chr2_1:12010987-12011006 | Msa0195230:five_prime_UTR | 25.0% |
! | AACTCAAATTGCAGAAAAAA+TGG | - | chr2_1:12008933-12008952 | Msa0195230:three_prime_UTR | 25.0% |
!!! | AGAATGTGTTTGTTTTTGTT+AGG | + | chr2_1:12010078-12010097 | None:intergenic | 25.0% |
! | ATTTGTAGTGAATAATGAGT+AGG | - | chr2_1:12010126-12010145 | Msa0195230:CDS | 25.0% |
! | TAATGAGTAGGTCTAATTAT+TGG | - | chr2_1:12010138-12010157 | Msa0195230:CDS | 25.0% |
! | AAGAAGACAAAAAAGAAAAG+AGG | - | chr2_1:12010606-12010625 | Msa0195230:CDS | 25.0% |
!!! | TTTTGAAACTTAATGTCTTG+TGG | - | chr2_1:12010698-12010717 | Msa0195230:CDS | 25.0% |
!! | GTGTATTGAAACATTGATTA+TGG | - | chr2_1:12010987-12011006 | Msa0195230:five_prime_UTR | 25.0% |
! | TGTATGTTGGTTGTTGAAAA+TGG | + | chr2_1:12008860-12008879 | None:intergenic | 30.0% |
GAAAGAGAGAATTTGTATGT+TGG | + | chr2_1:12008873-12008892 | None:intergenic | 30.0% | |
!!! | TTTTTCTGCAATTTGAGTTG+AGG | + | chr2_1:12008932-12008951 | None:intergenic | 30.0% |
TCAAATTGCAGAAAAAATGG+CGG | - | chr2_1:12008936-12008955 | Msa0195230:three_prime_UTR | 30.0% | |
!! | AAGTTCAAGTTGTTGTTCAT+TGG | + | chr2_1:12008976-12008995 | None:intergenic | 30.0% |
! | ATACGAAATCTTCTCCATTT+TGG | - | chr2_1:12009035-12009054 | Msa0195230:three_prime_UTR | 30.0% |
AATATGAGAGTTACTGTTAC+CGG | + | chr2_1:12009247-12009266 | None:intergenic | 30.0% | |
! | AAGCTTTTCCGAAAAACATT+CGG | - | chr2_1:12009462-12009481 | Msa0195230:CDS | 30.0% |
ATAATTCGAAATTGAATCGG+TGG | - | chr2_1:12010019-12010038 | Msa0195230:CDS | 30.0% | |
GTAGATTGAACAATTATGTG+CGG | - | chr2_1:12010258-12010277 | Msa0195230:CDS | 30.0% | |
!! | GTTGAGTCAGTCTTATTTAA+AGG | - | chr2_1:12010383-12010402 | Msa0195230:CDS | 30.0% |
!! | AGTCAGTCTTATTTAAAGGA+AGG | - | chr2_1:12010387-12010406 | Msa0195230:CDS | 30.0% |
GACAAATTGAAATTGTTTGG+TGG | - | chr2_1:12010434-12010453 | Msa0195230:CDS | 30.0% | |
AAGAAAAGAGGAAGATTAGT+AGG | - | chr2_1:12010618-12010637 | Msa0195230:CDS | 30.0% | |
! | AACTTAATGTCTTGTGGTTT+TGG | - | chr2_1:12010704-12010723 | Msa0195230:CDS | 30.0% |
! | ACTTAATGTCTTGTGGTTTT+GGG | - | chr2_1:12010705-12010724 | Msa0195230:CDS | 30.0% |
GGTTGTAGTAATATTAAGGA+TGG | + | chr2_1:12010783-12010802 | None:intergenic | 30.0% | |
GGTAGGTTGTAGTAATATTA+AGG | + | chr2_1:12010787-12010806 | None:intergenic | 30.0% | |
!! | TGATAGTGATTTGTTCGTAT+GGG | - | chr2_1:12010873-12010892 | Msa0195230:CDS | 30.0% |
! | CAAAAGGTGAATTTTGTACA+AGG | - | chr2_1:12010902-12010921 | Msa0195230:CDS | 30.0% |
! | TGTATGTTGGTTGTTGAAAA+TGG | + | chr2_1:12008860-12008879 | None:intergenic | 30.0% |
GAAAGAGAGAATTTGTATGT+TGG | + | chr2_1:12008873-12008892 | None:intergenic | 30.0% | |
!!! | TTTTTCTGCAATTTGAGTTG+AGG | + | chr2_1:12008932-12008951 | None:intergenic | 30.0% |
TCAAATTGCAGAAAAAATGG+CGG | - | chr2_1:12008936-12008955 | Msa0195230:three_prime_UTR | 30.0% | |
!! | AAGTTCAAGTTGTTGTTCAT+TGG | + | chr2_1:12008976-12008995 | None:intergenic | 30.0% |
! | ATACGAAATCTTCTCCATTT+TGG | - | chr2_1:12009035-12009054 | Msa0195230:three_prime_UTR | 30.0% |
AATATGAGAGTTACTGTTAC+CGG | + | chr2_1:12009247-12009266 | None:intergenic | 30.0% | |
! | AAGCTTTTCCGAAAAACATT+CGG | - | chr2_1:12009462-12009481 | Msa0195230:CDS | 30.0% |
ATAATTCGAAATTGAATCGG+TGG | - | chr2_1:12010019-12010038 | Msa0195230:CDS | 30.0% | |
GTAGATTGAACAATTATGTG+CGG | - | chr2_1:12010258-12010277 | Msa0195230:CDS | 30.0% | |
!! | GTTGAGTCAGTCTTATTTAA+AGG | - | chr2_1:12010383-12010402 | Msa0195230:CDS | 30.0% |
!! | AGTCAGTCTTATTTAAAGGA+AGG | - | chr2_1:12010387-12010406 | Msa0195230:CDS | 30.0% |
GACAAATTGAAATTGTTTGG+TGG | - | chr2_1:12010434-12010453 | Msa0195230:CDS | 30.0% | |
AAGAAAAGAGGAAGATTAGT+AGG | - | chr2_1:12010618-12010637 | Msa0195230:CDS | 30.0% | |
! | AACTTAATGTCTTGTGGTTT+TGG | - | chr2_1:12010704-12010723 | Msa0195230:CDS | 30.0% |
! | ACTTAATGTCTTGTGGTTTT+GGG | - | chr2_1:12010705-12010724 | Msa0195230:CDS | 30.0% |
GGTTGTAGTAATATTAAGGA+TGG | + | chr2_1:12010783-12010802 | None:intergenic | 30.0% | |
GGTAGGTTGTAGTAATATTA+AGG | + | chr2_1:12010787-12010806 | None:intergenic | 30.0% | |
!! | TGATAGTGATTTGTTCGTAT+GGG | - | chr2_1:12010873-12010892 | Msa0195230:CDS | 30.0% |
! | CAAAAGGTGAATTTTGTACA+AGG | - | chr2_1:12010902-12010921 | Msa0195230:CDS | 30.0% |
GAGTTTATCAACTTCGAAGT+TGG | + | chr2_1:12009013-12009032 | None:intergenic | 35.0% | |
! | AAGCGAATTCTTCGCATTTT+CGG | + | chr2_1:12009091-12009110 | None:intergenic | 35.0% |
CAGAAACTTCAAAGCTTCAT+CGG | + | chr2_1:12009367-12009386 | None:intergenic | 35.0% | |
TTTCTCACCGGAAACAAAAT+CGG | - | chr2_1:12009437-12009456 | Msa0195230:CDS | 35.0% | |
! | TGCATTCTCCGAATGTTTTT+CGG | + | chr2_1:12009473-12009492 | None:intergenic | 35.0% |
TCGTAGCAGGGAATTAAAAT+CGG | + | chr2_1:12009516-12009535 | None:intergenic | 35.0% | |
! | TCGATGGACTTCAATTCAAT+AGG | + | chr2_1:12009651-12009670 | None:intergenic | 35.0% |
ATTGAATTGAAGTCCATCGA+TGG | - | chr2_1:12009651-12009670 | Msa0195230:intron | 35.0% | |
TTGAATTGAAGTCCATCGAT+GGG | - | chr2_1:12009652-12009671 | Msa0195230:intron | 35.0% | |
! | CATGAGTTTCCGTTTTGTAA+CGG | - | chr2_1:12009759-12009778 | Msa0195230:intron | 35.0% |
TCAGAAACACCGTTACAAAA+CGG | + | chr2_1:12009771-12009790 | None:intergenic | 35.0% | |
! | TAACGGTGTTTCTGATTTGT+TGG | - | chr2_1:12009776-12009795 | Msa0195230:intron | 35.0% |
TATGTGCGGATTCAATCAAA+TGG | - | chr2_1:12010272-12010291 | Msa0195230:CDS | 35.0% | |
ATGTGCGGATTCAATCAAAT+GGG | - | chr2_1:12010273-12010292 | Msa0195230:CDS | 35.0% | |
TGATGGCTAAGGTAAACAAA+GGG | - | chr2_1:12010297-12010316 | Msa0195230:CDS | 35.0% | |
TAAGGTAAACAAAGGGAAGA+CGG | - | chr2_1:12010304-12010323 | Msa0195230:CDS | 35.0% | |
ATTTAAAGGAAGGAAGATCG+TGG | - | chr2_1:12010397-12010416 | Msa0195230:CDS | 35.0% | |
AGTTGATTAAGGAAGAAGAG+AGG | - | chr2_1:12010459-12010478 | Msa0195230:CDS | 35.0% | |
CTTTCTTAATCGATCTCAAG+CGG | + | chr2_1:12010738-12010757 | None:intergenic | 35.0% | |
!! | GTGATAGTGATTTGTTCGTA+TGG | - | chr2_1:12010872-12010891 | Msa0195230:CDS | 35.0% |
! | TTCGTATGGGTATTGTCAAA+AGG | - | chr2_1:12010886-12010905 | Msa0195230:CDS | 35.0% |
GAGTTTATCAACTTCGAAGT+TGG | + | chr2_1:12009013-12009032 | None:intergenic | 35.0% | |
! | AAGCGAATTCTTCGCATTTT+CGG | + | chr2_1:12009091-12009110 | None:intergenic | 35.0% |
CAGAAACTTCAAAGCTTCAT+CGG | + | chr2_1:12009367-12009386 | None:intergenic | 35.0% | |
TTTCTCACCGGAAACAAAAT+CGG | - | chr2_1:12009437-12009456 | Msa0195230:CDS | 35.0% | |
! | TGCATTCTCCGAATGTTTTT+CGG | + | chr2_1:12009473-12009492 | None:intergenic | 35.0% |
TCGTAGCAGGGAATTAAAAT+CGG | + | chr2_1:12009516-12009535 | None:intergenic | 35.0% | |
! | TCGATGGACTTCAATTCAAT+AGG | + | chr2_1:12009651-12009670 | None:intergenic | 35.0% |
ATTGAATTGAAGTCCATCGA+TGG | - | chr2_1:12009651-12009670 | Msa0195230:intron | 35.0% | |
TTGAATTGAAGTCCATCGAT+GGG | - | chr2_1:12009652-12009671 | Msa0195230:intron | 35.0% | |
! | CATGAGTTTCCGTTTTGTAA+CGG | - | chr2_1:12009759-12009778 | Msa0195230:intron | 35.0% |
TCAGAAACACCGTTACAAAA+CGG | + | chr2_1:12009771-12009790 | None:intergenic | 35.0% | |
! | TAACGGTGTTTCTGATTTGT+TGG | - | chr2_1:12009776-12009795 | Msa0195230:intron | 35.0% |
TATGTGCGGATTCAATCAAA+TGG | - | chr2_1:12010272-12010291 | Msa0195230:CDS | 35.0% | |
ATGTGCGGATTCAATCAAAT+GGG | - | chr2_1:12010273-12010292 | Msa0195230:CDS | 35.0% | |
TGATGGCTAAGGTAAACAAA+GGG | - | chr2_1:12010297-12010316 | Msa0195230:CDS | 35.0% | |
TAAGGTAAACAAAGGGAAGA+CGG | - | chr2_1:12010304-12010323 | Msa0195230:CDS | 35.0% | |
ATTTAAAGGAAGGAAGATCG+TGG | - | chr2_1:12010397-12010416 | Msa0195230:CDS | 35.0% | |
AGTTGATTAAGGAAGAAGAG+AGG | - | chr2_1:12010459-12010478 | Msa0195230:CDS | 35.0% | |
CTTTCTTAATCGATCTCAAG+CGG | + | chr2_1:12010738-12010757 | None:intergenic | 35.0% | |
!! | GTGATAGTGATTTGTTCGTA+TGG | - | chr2_1:12010872-12010891 | Msa0195230:CDS | 35.0% |
! | TTCGTATGGGTATTGTCAAA+AGG | - | chr2_1:12010886-12010905 | Msa0195230:CDS | 35.0% |
!! | ATTCTTCGCATTTTCGGTGT+CGG | + | chr2_1:12009085-12009104 | None:intergenic | 40.0% |
GTCAGAATTCTCTGCATTGA+CGG | - | chr2_1:12009150-12009169 | Msa0195230:three_prime_UTR | 40.0% | |
TGTTACCGGATTTCTTTCTG+AGG | + | chr2_1:12009233-12009252 | None:intergenic | 40.0% | |
TTTACCACGGGTGAAAAGTA+AGG | + | chr2_1:12009322-12009341 | None:intergenic | 40.0% | |
ATCGTCGGGAAATTCTGTTA+CGG | + | chr2_1:12009398-12009417 | None:intergenic | 40.0% | |
TAACAGAATTTCCCGACGAT+CGG | - | chr2_1:12009398-12009417 | Msa0195230:CDS | 40.0% | |
!! | AGCTTCTCCGATTTTGTTTC+CGG | + | chr2_1:12009447-12009466 | None:intergenic | 40.0% |
TGTTGCGATGAACAATCCAA+CGG | - | chr2_1:12009704-12009723 | Msa0195230:intron | 40.0% | |
!! | GATTTGTTGGTGCTTTCTCT+TGG | - | chr2_1:12009789-12009808 | Msa0195230:intron | 40.0% |
! | TTGGTGCTTTCTCTTGGTAA+CGG | - | chr2_1:12009795-12009814 | Msa0195230:intron | 40.0% |
TGAATCGGTGGTTACTAGTT+AGG | - | chr2_1:12010031-12010050 | Msa0195230:CDS | 40.0% | |
GGTTGATCAAGCTGTATCAA+TGG | - | chr2_1:12010223-12010242 | Msa0195230:CDS | 40.0% | |
CAAGCTGTATCAATGGCATT+TGG | - | chr2_1:12010230-12010249 | Msa0195230:CDS | 40.0% | |
TGTGCGGATTCAATCAAATG+GGG | - | chr2_1:12010274-12010293 | Msa0195230:CDS | 40.0% | |
GATTCAATCAAATGGGGTGA+TGG | - | chr2_1:12010280-12010299 | Msa0195230:CDS | 40.0% | |
GTGATGGCTAAGGTAAACAA+AGG | - | chr2_1:12010296-12010315 | Msa0195230:CDS | 40.0% | |
AAGGTAAACAAAGGGAAGAC+GGG | - | chr2_1:12010305-12010324 | Msa0195230:CDS | 40.0% | |
! | GTTTGGTGGAGAGTTGATTA+AGG | - | chr2_1:12010448-12010467 | Msa0195230:CDS | 40.0% |
CCATTCTTCAACACAACAGT+TGG | + | chr2_1:12010503-12010522 | None:intergenic | 40.0% | |
CCAACTGTTGTGTTGAAGAA+TGG | - | chr2_1:12010500-12010519 | Msa0195230:CDS | 40.0% | |
TCCTAGGAGATGAAGTTCTA+GGG | + | chr2_1:12010535-12010554 | None:intergenic | 40.0% | |
!! | ATTCTTCGCATTTTCGGTGT+CGG | + | chr2_1:12009085-12009104 | None:intergenic | 40.0% |
GTCAGAATTCTCTGCATTGA+CGG | - | chr2_1:12009150-12009169 | Msa0195230:three_prime_UTR | 40.0% | |
TGTTACCGGATTTCTTTCTG+AGG | + | chr2_1:12009233-12009252 | None:intergenic | 40.0% | |
TTTACCACGGGTGAAAAGTA+AGG | + | chr2_1:12009322-12009341 | None:intergenic | 40.0% | |
ATCGTCGGGAAATTCTGTTA+CGG | + | chr2_1:12009398-12009417 | None:intergenic | 40.0% | |
TAACAGAATTTCCCGACGAT+CGG | - | chr2_1:12009398-12009417 | Msa0195230:CDS | 40.0% | |
!! | AGCTTCTCCGATTTTGTTTC+CGG | + | chr2_1:12009447-12009466 | None:intergenic | 40.0% |
TGTTGCGATGAACAATCCAA+CGG | - | chr2_1:12009704-12009723 | Msa0195230:intron | 40.0% | |
!! | GATTTGTTGGTGCTTTCTCT+TGG | - | chr2_1:12009789-12009808 | Msa0195230:intron | 40.0% |
! | TTGGTGCTTTCTCTTGGTAA+CGG | - | chr2_1:12009795-12009814 | Msa0195230:intron | 40.0% |
TGAATCGGTGGTTACTAGTT+AGG | - | chr2_1:12010031-12010050 | Msa0195230:CDS | 40.0% | |
GGTTGATCAAGCTGTATCAA+TGG | - | chr2_1:12010223-12010242 | Msa0195230:CDS | 40.0% | |
CAAGCTGTATCAATGGCATT+TGG | - | chr2_1:12010230-12010249 | Msa0195230:CDS | 40.0% | |
TGTGCGGATTCAATCAAATG+GGG | - | chr2_1:12010274-12010293 | Msa0195230:CDS | 40.0% | |
GATTCAATCAAATGGGGTGA+TGG | - | chr2_1:12010280-12010299 | Msa0195230:CDS | 40.0% | |
GTGATGGCTAAGGTAAACAA+AGG | - | chr2_1:12010296-12010315 | Msa0195230:CDS | 40.0% | |
AAGGTAAACAAAGGGAAGAC+GGG | - | chr2_1:12010305-12010324 | Msa0195230:CDS | 40.0% | |
! | GTTTGGTGGAGAGTTGATTA+AGG | - | chr2_1:12010448-12010467 | Msa0195230:CDS | 40.0% |
CCATTCTTCAACACAACAGT+TGG | + | chr2_1:12010503-12010522 | None:intergenic | 40.0% | |
CCAACTGTTGTGTTGAAGAA+TGG | - | chr2_1:12010500-12010519 | Msa0195230:CDS | 40.0% | |
TCCTAGGAGATGAAGTTCTA+GGG | + | chr2_1:12010535-12010554 | None:intergenic | 40.0% | |
GCAGAGAATTCTGACTTTCC+CGG | + | chr2_1:12009145-12009164 | None:intergenic | 45.0% | |
AAGGTGAGAGAGTGATTTCG+CGG | + | chr2_1:12009202-12009221 | None:intergenic | 45.0% | |
!! | TCTTTCTGAGGCAGGATTCA+AGG | + | chr2_1:12009221-12009240 | None:intergenic | 45.0% |
TCCTGCCTCAGAAAGAAATC+CGG | - | chr2_1:12009225-12009244 | Msa0195230:three_prime_UTR | 45.0% | |
! | CTTTTCACCCGTGGTAAAGA+CGG | - | chr2_1:12009324-12009343 | Msa0195230:CDS | 45.0% |
AGGTAATCCGTCTTTACCAC+GGG | + | chr2_1:12009334-12009353 | None:intergenic | 45.0% | |
GAGGTAATCCGTCTTTACCA+CGG | + | chr2_1:12009335-12009354 | None:intergenic | 45.0% | |
AACAGAATTTCCCGACGATC+GGG | - | chr2_1:12009399-12009418 | Msa0195230:CDS | 45.0% | |
TTCAATTCAATAGGAGCCGC+TGG | + | chr2_1:12009642-12009661 | None:intergenic | 45.0% | |
ACGAAGATCTTAGCCGTTGA+TGG | - | chr2_1:12009678-12009697 | Msa0195230:intron | 45.0% | |
! | AAGATCTTAGCCGTTGATGG+AGG | - | chr2_1:12009681-12009700 | Msa0195230:intron | 45.0% |
!! | TTCTCTTGGTAACGGAGAGT+TGG | - | chr2_1:12009803-12009822 | Msa0195230:intron | 45.0% |
GAAACCTGAGGGAGACTTAA+CGG | + | chr2_1:12009838-12009857 | None:intergenic | 45.0% | |
GCAATTCTCACGAAACCTGA+GGG | + | chr2_1:12009849-12009868 | None:intergenic | 45.0% | |
TCAGGTTTCGTGAGAATTGC+CGG | - | chr2_1:12009849-12009868 | Msa0195230:intron | 45.0% | |
! | ATCAAATGGGGTGATGGCTA+AGG | - | chr2_1:12010286-12010305 | Msa0195230:CDS | 45.0% |
AGGTAAACAAAGGGAAGACG+GGG | - | chr2_1:12010306-12010325 | Msa0195230:CDS | 45.0% | |
GAAAACCACATCGGATTTGG+TGG | - | chr2_1:12010328-12010347 | Msa0195230:CDS | 45.0% | |
! | CCTAGGAGATGAAGTTCTAG+GGG | + | chr2_1:12010534-12010553 | None:intergenic | 45.0% |
GTCCTAGGAGATGAAGTTCT+AGG | + | chr2_1:12010536-12010555 | None:intergenic | 45.0% | |
GTAGTAGCTGATGAAGTCCT+AGG | + | chr2_1:12010551-12010570 | None:intergenic | 45.0% | |
GCAGAGAATTCTGACTTTCC+CGG | + | chr2_1:12009145-12009164 | None:intergenic | 45.0% | |
AAGGTGAGAGAGTGATTTCG+CGG | + | chr2_1:12009202-12009221 | None:intergenic | 45.0% | |
!! | TCTTTCTGAGGCAGGATTCA+AGG | + | chr2_1:12009221-12009240 | None:intergenic | 45.0% |
TCCTGCCTCAGAAAGAAATC+CGG | - | chr2_1:12009225-12009244 | Msa0195230:three_prime_UTR | 45.0% | |
! | CTTTTCACCCGTGGTAAAGA+CGG | - | chr2_1:12009324-12009343 | Msa0195230:CDS | 45.0% |
AGGTAATCCGTCTTTACCAC+GGG | + | chr2_1:12009334-12009353 | None:intergenic | 45.0% | |
GAGGTAATCCGTCTTTACCA+CGG | + | chr2_1:12009335-12009354 | None:intergenic | 45.0% | |
AACAGAATTTCCCGACGATC+GGG | - | chr2_1:12009399-12009418 | Msa0195230:CDS | 45.0% | |
TTCAATTCAATAGGAGCCGC+TGG | + | chr2_1:12009642-12009661 | None:intergenic | 45.0% | |
ACGAAGATCTTAGCCGTTGA+TGG | - | chr2_1:12009678-12009697 | Msa0195230:intron | 45.0% | |
! | AAGATCTTAGCCGTTGATGG+AGG | - | chr2_1:12009681-12009700 | Msa0195230:intron | 45.0% |
!! | TTCTCTTGGTAACGGAGAGT+TGG | - | chr2_1:12009803-12009822 | Msa0195230:intron | 45.0% |
GAAACCTGAGGGAGACTTAA+CGG | + | chr2_1:12009838-12009857 | None:intergenic | 45.0% | |
GCAATTCTCACGAAACCTGA+GGG | + | chr2_1:12009849-12009868 | None:intergenic | 45.0% | |
TCAGGTTTCGTGAGAATTGC+CGG | - | chr2_1:12009849-12009868 | Msa0195230:intron | 45.0% | |
! | ATCAAATGGGGTGATGGCTA+AGG | - | chr2_1:12010286-12010305 | Msa0195230:CDS | 45.0% |
AGGTAAACAAAGGGAAGACG+GGG | - | chr2_1:12010306-12010325 | Msa0195230:CDS | 45.0% | |
GAAAACCACATCGGATTTGG+TGG | - | chr2_1:12010328-12010347 | Msa0195230:CDS | 45.0% | |
! | CCTAGGAGATGAAGTTCTAG+GGG | + | chr2_1:12010534-12010553 | None:intergenic | 45.0% |
GTCCTAGGAGATGAAGTTCT+AGG | + | chr2_1:12010536-12010555 | None:intergenic | 45.0% | |
GTAGTAGCTGATGAAGTCCT+AGG | + | chr2_1:12010551-12010570 | None:intergenic | 45.0% | |
AAACAAGCCAAAAACGCCGC+CGG | - | chr2_1:12009123-12009142 | Msa0195230:three_prime_UTR | 50.0% | |
GAGAATTCTGACTTTCCCGG+CGG | + | chr2_1:12009142-12009161 | None:intergenic | 50.0% | |
!! | ACCGGATTTCTTTCTGAGGC+AGG | + | chr2_1:12009229-12009248 | None:intergenic | 50.0% |
ACCACGGGTGAAAAGTAAGG+CGG | + | chr2_1:12009319-12009338 | None:intergenic | 50.0% | |
ACAGAATTTCCCGACGATCG+GGG | - | chr2_1:12009400-12009419 | Msa0195230:CDS | 50.0% | |
TTTCCGGTGAGAAAACTCGC+CGG | + | chr2_1:12009431-12009450 | None:intergenic | 50.0% | |
GATCTTCGTCTTCCCATCGA+TGG | + | chr2_1:12009667-12009686 | None:intergenic | 50.0% | |
CATCGCAACACCTCCATCAA+CGG | + | chr2_1:12009694-12009713 | None:intergenic | 50.0% | |
TGAGTAACAGCAGTAGCCGT+TGG | + | chr2_1:12009723-12009742 | None:intergenic | 50.0% | |
GGCAATTCTCACGAAACCTG+AGG | + | chr2_1:12009850-12009869 | None:intergenic | 50.0% | |
TTCGTGAGAATTGCCGGTGA+AGG | - | chr2_1:12009855-12009874 | Msa0195230:intron | 50.0% | |
CATATCGGAAGCTCCTTCAC+CGG | + | chr2_1:12009871-12009890 | None:intergenic | 50.0% | |
GAAGACGGGGAAAACCACAT+CGG | - | chr2_1:12010319-12010338 | Msa0195230:CDS | 50.0% | |
GGGGAAAACCACATCGGATT+TGG | - | chr2_1:12010325-12010344 | Msa0195230:CDS | 50.0% | |
!! | AACCACATCGGATTTGGTGG+CGG | - | chr2_1:12010331-12010350 | Msa0195230:CDS | 50.0% |
!! | ATCGGATTTGGTGGCGGTTT+CGG | - | chr2_1:12010337-12010356 | Msa0195230:CDS | 50.0% |
!! | GGAGATGAAGTTCTAGGGGA+GGG | + | chr2_1:12010530-12010549 | None:intergenic | 50.0% |
!! | AGGAGATGAAGTTCTAGGGG+AGG | + | chr2_1:12010531-12010550 | None:intergenic | 50.0% |
CCCCTAGAACTTCATCTCCT+AGG | - | chr2_1:12010531-12010550 | Msa0195230:CDS | 50.0% | |
GGATTCAACACTGCACAGCT+CGG | + | chr2_1:12010762-12010781 | None:intergenic | 50.0% | |
AAACAAGCCAAAAACGCCGC+CGG | - | chr2_1:12009123-12009142 | Msa0195230:three_prime_UTR | 50.0% | |
GAGAATTCTGACTTTCCCGG+CGG | + | chr2_1:12009142-12009161 | None:intergenic | 50.0% | |
!! | ACCGGATTTCTTTCTGAGGC+AGG | + | chr2_1:12009229-12009248 | None:intergenic | 50.0% |
ACCACGGGTGAAAAGTAAGG+CGG | + | chr2_1:12009319-12009338 | None:intergenic | 50.0% | |
ACAGAATTTCCCGACGATCG+GGG | - | chr2_1:12009400-12009419 | Msa0195230:CDS | 50.0% | |
TTTCCGGTGAGAAAACTCGC+CGG | + | chr2_1:12009431-12009450 | None:intergenic | 50.0% | |
GATCTTCGTCTTCCCATCGA+TGG | + | chr2_1:12009667-12009686 | None:intergenic | 50.0% | |
CATCGCAACACCTCCATCAA+CGG | + | chr2_1:12009694-12009713 | None:intergenic | 50.0% | |
TGAGTAACAGCAGTAGCCGT+TGG | + | chr2_1:12009723-12009742 | None:intergenic | 50.0% | |
GGCAATTCTCACGAAACCTG+AGG | + | chr2_1:12009850-12009869 | None:intergenic | 50.0% | |
TTCGTGAGAATTGCCGGTGA+AGG | - | chr2_1:12009855-12009874 | Msa0195230:intron | 50.0% | |
CATATCGGAAGCTCCTTCAC+CGG | + | chr2_1:12009871-12009890 | None:intergenic | 50.0% | |
GAAGACGGGGAAAACCACAT+CGG | - | chr2_1:12010319-12010338 | Msa0195230:CDS | 50.0% | |
GGGGAAAACCACATCGGATT+TGG | - | chr2_1:12010325-12010344 | Msa0195230:CDS | 50.0% | |
!! | AACCACATCGGATTTGGTGG+CGG | - | chr2_1:12010331-12010350 | Msa0195230:CDS | 50.0% |
!! | ATCGGATTTGGTGGCGGTTT+CGG | - | chr2_1:12010337-12010356 | Msa0195230:CDS | 50.0% |
!! | GGAGATGAAGTTCTAGGGGA+GGG | + | chr2_1:12010530-12010549 | None:intergenic | 50.0% |
!! | AGGAGATGAAGTTCTAGGGG+AGG | + | chr2_1:12010531-12010550 | None:intergenic | 50.0% |
CCCCTAGAACTTCATCTCCT+AGG | - | chr2_1:12010531-12010550 | Msa0195230:CDS | 50.0% | |
GGATTCAACACTGCACAGCT+CGG | + | chr2_1:12010762-12010781 | None:intergenic | 50.0% | |
AACAAGCCAAAAACGCCGCC+GGG | - | chr2_1:12009124-12009143 | Msa0195230:three_prime_UTR | 55.0% | |
! | ATTCTCTGCATTGACGGCGC+CGG | - | chr2_1:12009156-12009175 | Msa0195230:three_prime_UTR | 55.0% |
GATTTCTTCGACGCCGTTGC+TGG | - | chr2_1:12009270-12009289 | Msa0195230:exon | 55.0% | |
GCTTCATCGGCAGTGAACAG+AGG | + | chr2_1:12009354-12009373 | None:intergenic | 55.0% | |
! | TCTCCGGCGAGTTTTCTCAC+CGG | - | chr2_1:12009425-12009444 | Msa0195230:CDS | 55.0% |
!! | ACCGTCGATTTCGAGAGCGT+CGG | + | chr2_1:12009574-12009593 | None:intergenic | 55.0% |
AACGCCGTTAAGTCTCCCTC+AGG | - | chr2_1:12009831-12009850 | Msa0195230:intron | 55.0% | |
CGGTGAAGGAGCTTCCGATA+TGG | - | chr2_1:12009869-12009888 | Msa0195230:intron | 55.0% | |
AACCGCCACCAAATCCGATG+TGG | + | chr2_1:12010336-12010355 | None:intergenic | 55.0% | |
AACAAGCCAAAAACGCCGCC+GGG | - | chr2_1:12009124-12009143 | Msa0195230:three_prime_UTR | 55.0% | |
! | ATTCTCTGCATTGACGGCGC+CGG | - | chr2_1:12009156-12009175 | Msa0195230:three_prime_UTR | 55.0% |
GATTTCTTCGACGCCGTTGC+TGG | - | chr2_1:12009270-12009289 | Msa0195230:exon | 55.0% | |
GCTTCATCGGCAGTGAACAG+AGG | + | chr2_1:12009354-12009373 | None:intergenic | 55.0% | |
! | TCTCCGGCGAGTTTTCTCAC+CGG | - | chr2_1:12009425-12009444 | Msa0195230:CDS | 55.0% |
!! | ACCGTCGATTTCGAGAGCGT+CGG | + | chr2_1:12009574-12009593 | None:intergenic | 55.0% |
AACGCCGTTAAGTCTCCCTC+AGG | - | chr2_1:12009831-12009850 | Msa0195230:intron | 55.0% | |
CGGTGAAGGAGCTTCCGATA+TGG | - | chr2_1:12009869-12009888 | Msa0195230:intron | 55.0% | |
AACCGCCACCAAATCCGATG+TGG | + | chr2_1:12010336-12010355 | None:intergenic | 55.0% | |
! | GACTTTCCCGGCGGCGTTTT+TGG | + | chr2_1:12009133-12009152 | None:intergenic | 60.0% |
GAGGATGCCGTCGGTGTAAC+CGG | + | chr2_1:12009178-12009197 | None:intergenic | 60.0% | |
GAGAGAGTGATTTCGCGGCG+AGG | + | chr2_1:12009197-12009216 | None:intergenic | 60.0% | |
GGGTGAAAAGTAAGGCGGCG+AGG | + | chr2_1:12009314-12009333 | None:intergenic | 60.0% | |
!! | GCCGCCTTACTTTTCACCCG+TGG | - | chr2_1:12009315-12009334 | Msa0195230:CDS | 60.0% |
CGCGTGACGAGATCGTAGCA+GGG | + | chr2_1:12009528-12009547 | None:intergenic | 60.0% | |
TCGGCGCGGGAGAAAACGAA+CGG | + | chr2_1:12009555-12009574 | None:intergenic | 60.0% | |
GCCGACGCTCTCGAAATCGA+CGG | - | chr2_1:12009570-12009589 | Msa0195230:CDS | 60.0% | |
TGCCACGTCAGCTGATCCAG+CGG | - | chr2_1:12009623-12009642 | Msa0195230:CDS | 60.0% | |
!! | GGATTTGGTGGCGGTTTCGG+AGG | - | chr2_1:12010340-12010359 | Msa0195230:CDS | 60.0% |
GGCGGTTTCGGAGGAGATGT+TGG | - | chr2_1:12010349-12010368 | Msa0195230:CDS | 60.0% | |
! | GACTTTCCCGGCGGCGTTTT+TGG | + | chr2_1:12009133-12009152 | None:intergenic | 60.0% |
GAGGATGCCGTCGGTGTAAC+CGG | + | chr2_1:12009178-12009197 | None:intergenic | 60.0% | |
GAGAGAGTGATTTCGCGGCG+AGG | + | chr2_1:12009197-12009216 | None:intergenic | 60.0% | |
GGGTGAAAAGTAAGGCGGCG+AGG | + | chr2_1:12009314-12009333 | None:intergenic | 60.0% | |
!! | GCCGCCTTACTTTTCACCCG+TGG | - | chr2_1:12009315-12009334 | Msa0195230:CDS | 60.0% |
CGCGTGACGAGATCGTAGCA+GGG | + | chr2_1:12009528-12009547 | None:intergenic | 60.0% | |
TCGGCGCGGGAGAAAACGAA+CGG | + | chr2_1:12009555-12009574 | None:intergenic | 60.0% | |
GCCGACGCTCTCGAAATCGA+CGG | - | chr2_1:12009570-12009589 | Msa0195230:CDS | 60.0% | |
TGCCACGTCAGCTGATCCAG+CGG | - | chr2_1:12009623-12009642 | Msa0195230:CDS | 60.0% | |
!! | GGATTTGGTGGCGGTTTCGG+AGG | - | chr2_1:12010340-12010359 | Msa0195230:CDS | 60.0% |
GGCGGTTTCGGAGGAGATGT+TGG | - | chr2_1:12010349-12010368 | Msa0195230:CDS | 60.0% | |
TTTCGCGGCGAGGATGCCGT+CGG | + | chr2_1:12009187-12009206 | None:intergenic | 65.0% | |
!! | TTCGACGCCGTTGCTGGCTC+CGG | - | chr2_1:12009276-12009295 | Msa0195230:exon | 65.0% |
ACCGACACCGGAGCCAGCAA+CGG | + | chr2_1:12009286-12009305 | None:intergenic | 65.0% | |
CCGGAGAATCCCCGATCGTC+GGG | + | chr2_1:12009412-12009431 | None:intergenic | 65.0% | |
CCCGACGATCGGGGATTCTC+CGG | - | chr2_1:12009409-12009428 | Msa0195230:CDS | 65.0% | |
GCCGGAGAATCCCCGATCGT+CGG | + | chr2_1:12009413-12009432 | None:intergenic | 65.0% | |
GCGCGTGACGAGATCGTAGC+AGG | + | chr2_1:12009529-12009548 | None:intergenic | 65.0% | |
!! | GATTTCGAGAGCGTCGGCGC+GGG | + | chr2_1:12009568-12009587 | None:intergenic | 65.0% |
!! | CGATTTCGAGAGCGTCGGCG+CGG | + | chr2_1:12009569-12009588 | None:intergenic | 65.0% |
AGCCGCTGGATCAGCTGACG+TGG | + | chr2_1:12009628-12009647 | None:intergenic | 65.0% | |
TTTCGCGGCGAGGATGCCGT+CGG | + | chr2_1:12009187-12009206 | None:intergenic | 65.0% | |
!! | TTCGACGCCGTTGCTGGCTC+CGG | - | chr2_1:12009276-12009295 | Msa0195230:exon | 65.0% |
ACCGACACCGGAGCCAGCAA+CGG | + | chr2_1:12009286-12009305 | None:intergenic | 65.0% | |
CCGGAGAATCCCCGATCGTC+GGG | + | chr2_1:12009412-12009431 | None:intergenic | 65.0% | |
CCCGACGATCGGGGATTCTC+CGG | - | chr2_1:12009409-12009428 | Msa0195230:CDS | 65.0% | |
GCCGGAGAATCCCCGATCGT+CGG | + | chr2_1:12009413-12009432 | None:intergenic | 65.0% | |
GCGCGTGACGAGATCGTAGC+AGG | + | chr2_1:12009529-12009548 | None:intergenic | 65.0% | |
!! | GATTTCGAGAGCGTCGGCGC+GGG | + | chr2_1:12009568-12009587 | None:intergenic | 65.0% |
!! | CGATTTCGAGAGCGTCGGCG+CGG | + | chr2_1:12009569-12009588 | None:intergenic | 65.0% |
AGCCGCTGGATCAGCTGACG+TGG | + | chr2_1:12009628-12009647 | None:intergenic | 65.0% | |
!! | GACGGCGCCGGTTACACCGA+CGG | - | chr2_1:12009168-12009187 | Msa0195230:three_prime_UTR | 70.0% |
!! | GCCGTTGCTGGCTCCGGTGT+CGG | - | chr2_1:12009282-12009301 | Msa0195230:CDS | 70.0% |
!! | GTTGCTGGCTCCGGTGTCGG+TGG | - | chr2_1:12009285-12009304 | Msa0195230:CDS | 70.0% |
GGCGAGGACTCCACCGACAC+CGG | + | chr2_1:12009298-12009317 | None:intergenic | 70.0% | |
!! | GACGGCGCCGGTTACACCGA+CGG | - | chr2_1:12009168-12009187 | Msa0195230:three_prime_UTR | 70.0% |
!! | GCCGTTGCTGGCTCCGGTGT+CGG | - | chr2_1:12009282-12009301 | Msa0195230:CDS | 70.0% |
!! | GTTGCTGGCTCCGGTGTCGG+TGG | - | chr2_1:12009285-12009304 | Msa0195230:CDS | 70.0% |
GGCGAGGACTCCACCGACAC+CGG | + | chr2_1:12009298-12009317 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 12008841 | 12011035 | 12008841 | ID=Msa0195230;Name=Msa0195230 |
chr2_1 | mRNA | 12008841 | 12011035 | 12008841 | ID=Msa0195230-mRNA-1;Parent=Msa0195230;Name=Msa0195230-mRNA-1;_AED=0.00;_eAED=0.00;_QI=111|1|1|1|1|1|2|437|437 |
chr2_1 | exon | 12008841 | 12009652 | 12008841 | ID=Msa0195230-mRNA-1:exon:5231;Parent=Msa0195230-mRNA-1 |
chr2_1 | exon | 12009986 | 12011035 | 12009986 | ID=Msa0195230-mRNA-1:exon:5230;Parent=Msa0195230-mRNA-1 |
chr2_1 | five_prime_UTR | 12010925 | 12011035 | 12010925 | ID=Msa0195230-mRNA-1:five_prime_utr;Parent=Msa0195230-mRNA-1 |
chr2_1 | CDS | 12009986 | 12010924 | 12009986 | ID=Msa0195230-mRNA-1:cds;Parent=Msa0195230-mRNA-1 |
chr2_1 | CDS | 12009278 | 12009652 | 12009278 | ID=Msa0195230-mRNA-1:cds;Parent=Msa0195230-mRNA-1 |
chr2_1 | three_prime_UTR | 12008841 | 12009277 | 12008841 | ID=Msa0195230-mRNA-1:three_prime_utr;Parent=Msa0195230-mRNA-1 |
Gene Sequence |
Protein sequence |