Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0214820 | XP_004489029.1 | 82.380 | 437 | 73 | 2 | 1 | 435 | 1 | 435 | 0.0 | 751 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0214820 | sp|Q9ZVA5|EP1L4_ARATH | 47.907 | 430 | 210 | 7 | 15 | 434 | 9 | 434 | 4.54e-138 | 405 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0214820 | A0A1S2XGJ0 | 82.380 | 437 | 73 | 2 | 1 | 435 | 1 | 435 | 0.0 | 751 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0052780 | Msa0214820 | 0.836812 | 7.515441e-57 | -8.615850e-47 |
Msa0097570 | Msa0214820 | 0.836245 | 1.047893e-56 | -8.615850e-47 |
Msa0145430 | Msa0214820 | 0.838143 | 3.426502e-57 | -8.615850e-47 |
Msa0214800 | Msa0214820 | 0.820767 | 5.764629e-53 | -8.615850e-47 |
Msa0214820 | Msa0254470 | 0.809565 | 1.776726e-50 | -8.615850e-47 |
Msa0214820 | Msa0264580 | -0.800865 | 1.179386e-48 | -8.615850e-47 |
Msa0214820 | Msa0294200 | 0.851754 | 7.223055e-61 | -8.615850e-47 |
Msa0214820 | Msa0320170 | 0.808718 | 2.698315e-50 | -8.615850e-47 |
Msa0214820 | Msa0332770 | 0.807383 | 5.193335e-50 | -8.615850e-47 |
Msa0214820 | Msa0332780 | 0.871152 | 8.497146e-67 | -8.615850e-47 |
Msa0214820 | Msa0339970 | -0.801717 | 7.892956e-49 | -8.615850e-47 |
Msa0214820 | Msa0402800 | 0.806704 | 7.229248e-50 | -8.615850e-47 |
Msa0214820 | Msa0497860 | 0.803663 | 3.130651e-49 | -8.615850e-47 |
Msa0214820 | Msa0603300 | 0.806846 | 6.745620e-50 | -8.615850e-47 |
Msa0214820 | Msa0701430 | 0.810455 | 1.143164e-50 | -8.615850e-47 |
Msa0214820 | Msa1038300 | 0.818496 | 1.901474e-52 | -8.615850e-47 |
Msa0214820 | Msa1173150 | 0.839017 | 2.037122e-57 | -8.615850e-47 |
Msa0214820 | Msa1449580 | 0.817705 | 2.870262e-52 | -8.615850e-47 |
Msa0214820 | Msa1456490 | 0.804270 | 2.341615e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0214820 | MtrunA17_Chr2g0315841 | 83.105 | 438 | 69 | 3 | 1 | 435 | 1 | 436 | 0.0 | 748 |
Msa0214820 | MtrunA17_Chr2g0315851 | 80.682 | 440 | 78 | 4 | 1 | 435 | 1 | 438 | 0.0 | 710 |
Msa0214820 | MtrunA17_Chr2g0315871 | 77.099 | 262 | 44 | 2 | 33 | 294 | 2 | 247 | 1.97e-143 | 410 |
Msa0214820 | MtrunA17_Chr2g0315861 | 68.824 | 170 | 49 | 2 | 217 | 384 | 2 | 169 | 1.73e-80 | 246 |
Msa0214820 | MtrunA17_Chr1g0149381 | 25.840 | 387 | 233 | 16 | 63 | 432 | 65 | 414 | 8.86e-22 | 98.2 |
Msa0214820 | MtrunA17_Chr7g0257821 | 27.688 | 372 | 209 | 19 | 60 | 409 | 48 | 381 | 5.54e-20 | 92.8 |
Msa0214820 | MtrunA17_Chr3g0134321 | 41.667 | 144 | 79 | 4 | 60 | 201 | 42 | 182 | 7.41e-20 | 92.4 |
Msa0214820 | MtrunA17_Chr2g0323301 | 27.273 | 374 | 215 | 18 | 93 | 432 | 77 | 427 | 1.59e-19 | 91.7 |
Msa0214820 | MtrunA17_Chr7g0237331 | 27.089 | 395 | 244 | 14 | 60 | 433 | 48 | 419 | 3.68e-19 | 90.5 |
Msa0214820 | MtrunA17_Chr3g0106211 | 26.722 | 363 | 219 | 14 | 63 | 402 | 45 | 383 | 8.33e-19 | 89.4 |
Msa0214820 | MtrunA17_Chr1g0202331 | 24.524 | 420 | 253 | 20 | 60 | 432 | 44 | 446 | 8.84e-19 | 89.4 |
Msa0214820 | MtrunA17_Chr3g0134291 | 26.558 | 369 | 209 | 17 | 60 | 397 | 45 | 382 | 1.56e-18 | 88.6 |
Msa0214820 | MtrunA17_Chr0c04g0492001 | 26.558 | 369 | 209 | 17 | 60 | 397 | 45 | 382 | 2.62e-18 | 87.8 |
Msa0214820 | MtrunA17_Chr0c04g0492031 | 26.558 | 369 | 209 | 17 | 60 | 397 | 45 | 382 | 2.71e-18 | 87.8 |
Msa0214820 | MtrunA17_Chr7g0244431 | 25.496 | 353 | 223 | 14 | 93 | 433 | 80 | 404 | 2.99e-18 | 86.7 |
Msa0214820 | MtrunA17_Chr3g0106221 | 27.586 | 406 | 250 | 17 | 57 | 433 | 35 | 425 | 3.10e-18 | 87.4 |
Msa0214820 | MtrunA17_Chr3g0106121 | 26.243 | 362 | 223 | 14 | 63 | 403 | 42 | 380 | 3.25e-18 | 87.4 |
Msa0214820 | MtrunA17_Chr8g0361281 | 25.397 | 378 | 219 | 14 | 58 | 400 | 39 | 388 | 7.22e-18 | 86.3 |
Msa0214820 | MtrunA17_Chr3g0106151 | 26.253 | 419 | 261 | 17 | 34 | 433 | 18 | 407 | 1.08e-17 | 85.9 |
Msa0214820 | MtrunA17_Chr3g0137741 | 23.280 | 378 | 249 | 12 | 63 | 430 | 60 | 406 | 1.76e-17 | 85.1 |
Msa0214820 | MtrunA17_Chr7g0236561 | 25.634 | 355 | 216 | 15 | 93 | 418 | 55 | 390 | 2.11e-17 | 84.7 |
Msa0214820 | MtrunA17_Chr7g0237341 | 25.990 | 404 | 237 | 17 | 60 | 433 | 47 | 418 | 5.24e-17 | 83.6 |
Msa0214820 | MtrunA17_Chr7g0236641 | 23.373 | 338 | 207 | 13 | 93 | 400 | 75 | 390 | 6.08e-17 | 83.6 |
Msa0214820 | MtrunA17_Chr2g0280681 | 25.070 | 359 | 226 | 13 | 63 | 400 | 50 | 386 | 7.85e-17 | 83.2 |
Msa0214820 | MtrunA17_Chr7g0237351 | 25.758 | 396 | 249 | 17 | 60 | 433 | 47 | 419 | 1.33e-16 | 82.4 |
Msa0214820 | MtrunA17_Chr2g0280691 | 25.000 | 360 | 225 | 14 | 63 | 400 | 48 | 384 | 1.37e-16 | 82.4 |
Msa0214820 | MtrunA17_Chr4g0023071 | 26.260 | 377 | 219 | 17 | 92 | 432 | 76 | 429 | 1.53e-16 | 82.4 |
Msa0214820 | MtrunA17_Chr2g0280711 | 25.740 | 338 | 199 | 15 | 93 | 400 | 76 | 391 | 2.02e-16 | 82.0 |
Msa0214820 | MtrunA17_Chr3g0106131 | 25.127 | 394 | 253 | 14 | 63 | 435 | 42 | 414 | 5.48e-16 | 80.5 |
Msa0214820 | MtrunA17_Chr7g0236691 | 24.024 | 333 | 210 | 11 | 93 | 400 | 75 | 389 | 7.81e-16 | 80.1 |
Msa0214820 | MtrunA17_Chr7g0236341 | 24.242 | 330 | 208 | 12 | 93 | 400 | 75 | 384 | 1.32e-15 | 79.3 |
Msa0214820 | MtrunA17_Chr2g0280701 | 26.786 | 336 | 194 | 15 | 93 | 400 | 73 | 384 | 1.88e-15 | 79.0 |
Msa0214820 | MtrunA17_Chr8g0340061 | 26.331 | 338 | 199 | 15 | 93 | 402 | 77 | 392 | 1.92e-15 | 78.2 |
Msa0214820 | MtrunA17_Chr5g0428111 | 24.339 | 378 | 222 | 15 | 91 | 432 | 78 | 427 | 1.93e-15 | 79.0 |
Msa0214820 | MtrunA17_Chr7g0236231 | 24.181 | 397 | 252 | 18 | 63 | 434 | 58 | 430 | 4.35e-15 | 77.8 |
Msa0214820 | MtrunA17_Chr3g0106201 | 27.273 | 363 | 211 | 18 | 63 | 400 | 42 | 376 | 7.25e-15 | 77.0 |
Msa0214820 | MtrunA17_Chr3g0106141 | 25.510 | 392 | 256 | 12 | 63 | 435 | 42 | 416 | 1.62e-14 | 75.9 |
Msa0214820 | MtrunA17_Chr5g0428101 | 41.593 | 113 | 60 | 3 | 91 | 197 | 77 | 189 | 2.15e-14 | 75.5 |
Msa0214820 | MtrunA17_Chr2g0318171 | 23.876 | 356 | 213 | 17 | 93 | 430 | 90 | 405 | 2.27e-14 | 75.5 |
Msa0214820 | MtrunA17_Chr3g0106191 | 25.424 | 354 | 221 | 14 | 96 | 433 | 2 | 328 | 9.07e-14 | 73.6 |
Msa0214820 | MtrunA17_Chr7g0236201 | 22.792 | 351 | 213 | 17 | 90 | 405 | 74 | 401 | 1.73e-13 | 72.8 |
Msa0214820 | MtrunA17_Chr7g0236521 | 25.369 | 339 | 204 | 16 | 93 | 403 | 55 | 372 | 1.75e-13 | 72.0 |
Msa0214820 | MtrunA17_Chr7g0236121 | 22.792 | 351 | 213 | 17 | 90 | 405 | 74 | 401 | 1.96e-13 | 72.4 |
Msa0214820 | MtrunA17_Chr7g0236161 | 22.792 | 351 | 213 | 17 | 90 | 405 | 74 | 401 | 2.20e-13 | 72.4 |
Msa0214820 | MtrunA17_Chr8g0338511 | 25.212 | 353 | 205 | 13 | 93 | 410 | 85 | 413 | 3.13e-13 | 71.2 |
Msa0214820 | MtrunA17_Chr8g0348661 | 24.505 | 404 | 250 | 17 | 60 | 433 | 31 | 409 | 3.26e-13 | 72.0 |
Msa0214820 | MtrunA17_Chr3g0078541 | 23.310 | 429 | 234 | 17 | 60 | 432 | 56 | 445 | 3.84e-13 | 71.6 |
Msa0214820 | MtrunA17_Chr2g0333091 | 36.283 | 113 | 67 | 2 | 60 | 172 | 55 | 162 | 3.84e-13 | 71.6 |
Msa0214820 | MtrunA17_Chr4g0042391 | 23.348 | 454 | 280 | 22 | 10 | 433 | 2 | 417 | 3.91e-13 | 71.6 |
Msa0214820 | MtrunA17_Chr8g0361301 | 25.622 | 402 | 244 | 19 | 63 | 434 | 47 | 423 | 6.03e-13 | 70.9 |
Msa0214820 | MtrunA17_Chr6g0467281 | 25.581 | 258 | 152 | 10 | 93 | 339 | 72 | 300 | 8.60e-13 | 70.5 |
Msa0214820 | MtrunA17_Chr3g0084421 | 24.251 | 367 | 234 | 17 | 93 | 434 | 38 | 385 | 1.12e-12 | 70.1 |
Msa0214820 | MtrunA17_Chr8g0340091 | 24.176 | 364 | 211 | 13 | 93 | 433 | 130 | 451 | 1.21e-12 | 70.1 |
Msa0214820 | MtrunA17_Chr8g0361441 | 24.036 | 337 | 203 | 14 | 93 | 400 | 77 | 389 | 1.26e-12 | 70.1 |
Msa0214820 | MtrunA17_Chr3g0098791 | 33.987 | 153 | 85 | 8 | 93 | 233 | 81 | 229 | 2.27e-12 | 68.9 |
Msa0214820 | MtrunA17_Chr2g0323241 | 45.000 | 80 | 40 | 3 | 93 | 169 | 81 | 159 | 2.56e-12 | 68.6 |
Msa0214820 | MtrunA17_Chr7g0236551 | 24.699 | 332 | 210 | 13 | 93 | 403 | 75 | 387 | 2.59e-12 | 68.9 |
Msa0214820 | MtrunA17_Chr8g0338501 | 24.716 | 352 | 205 | 16 | 93 | 410 | 109 | 434 | 4.25e-12 | 68.2 |
Msa0214820 | MtrunA17_Chr2g0311511 | 26.573 | 286 | 168 | 11 | 63 | 322 | 58 | 327 | 5.42e-12 | 67.8 |
Msa0214820 | MtrunA17_Chr4g0048581 | 27.626 | 257 | 153 | 11 | 92 | 335 | 80 | 316 | 5.77e-12 | 67.8 |
Msa0214820 | MtrunA17_Chr8g0361311 | 24.876 | 402 | 254 | 18 | 60 | 434 | 43 | 423 | 6.95e-12 | 67.0 |
Msa0214820 | MtrunA17_Chr2g0280771 | 23.944 | 355 | 208 | 18 | 93 | 409 | 70 | 400 | 8.96e-12 | 67.0 |
Msa0214820 | MtrunA17_Chr7g0265791 | 25.310 | 403 | 227 | 18 | 63 | 432 | 63 | 424 | 9.28e-12 | 67.0 |
Msa0214820 | MtrunA17_Chr8g0357761 | 32.984 | 191 | 108 | 9 | 69 | 246 | 68 | 251 | 2.91e-11 | 65.9 |
Msa0214820 | MtrunA17_Chr8g0357821 | 37.391 | 115 | 63 | 4 | 93 | 198 | 89 | 203 | 3.04e-11 | 62.8 |
Msa0214820 | MtrunA17_Chr2g0280841 | 24.079 | 353 | 208 | 19 | 93 | 409 | 79 | 407 | 4.20e-11 | 64.7 |
Msa0214820 | MtrunA17_Chr8g0361261 | 25.743 | 404 | 241 | 21 | 63 | 434 | 78 | 454 | 4.43e-11 | 65.1 |
Msa0214820 | MtrunA17_Chr7g0237391 | 25.956 | 366 | 214 | 15 | 63 | 402 | 49 | 383 | 4.79e-11 | 65.1 |
Msa0214820 | MtrunA17_Chr4g0063691 | 24.176 | 364 | 242 | 16 | 63 | 402 | 59 | 412 | 7.68e-11 | 64.3 |
Msa0214820 | MtrunA17_Chr2g0280801 | 24.513 | 359 | 200 | 18 | 93 | 409 | 78 | 407 | 7.87e-11 | 64.3 |
Msa0214820 | MtrunA17_Chr5g0399561 | 33.333 | 144 | 85 | 4 | 63 | 201 | 47 | 184 | 9.87e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0214820 | AT1G78860.1 | 47.907 | 430 | 210 | 7 | 15 | 434 | 9 | 434 | 4.61e-139 | 405 |
Msa0214820 | AT1G78850.1 | 46.050 | 443 | 221 | 7 | 1 | 434 | 1 | 434 | 7.83e-137 | 400 |
Msa0214820 | AT1G78830.1 | 42.888 | 464 | 222 | 12 | 1 | 431 | 1 | 454 | 8.92e-116 | 347 |
Msa0214820 | AT1G78820.1 | 41.304 | 460 | 230 | 11 | 6 | 431 | 1 | 454 | 2.68e-111 | 335 |
Msa0214820 | AT1G16905.1 | 41.889 | 413 | 220 | 5 | 28 | 434 | 24 | 422 | 4.32e-110 | 331 |
Msa0214820 | AT4G00340.1 | 26.368 | 402 | 246 | 16 | 59 | 435 | 36 | 412 | 8.81e-23 | 101 |
Msa0214820 | AT4G00340.2 | 27.793 | 367 | 223 | 15 | 59 | 407 | 36 | 378 | 1.62e-22 | 100 |
Msa0214820 | AT5G24080.2 | 26.131 | 398 | 236 | 17 | 60 | 415 | 49 | 430 | 4.33e-22 | 99.8 |
Msa0214820 | AT5G35370.1 | 25.067 | 371 | 213 | 17 | 93 | 432 | 86 | 422 | 1.00e-20 | 95.5 |
Msa0214820 | AT4G32300.1 | 23.529 | 408 | 232 | 13 | 60 | 434 | 52 | 412 | 3.20e-20 | 94.0 |
Msa0214820 | AT3G12000.1 | 26.486 | 370 | 224 | 16 | 63 | 405 | 56 | 404 | 5.32e-18 | 86.3 |
Msa0214820 | AT4G21390.1 | 25.378 | 331 | 209 | 12 | 93 | 400 | 79 | 394 | 6.80e-17 | 84.0 |
Msa0214820 | AT4G21390.2 | 25.378 | 331 | 209 | 12 | 93 | 400 | 79 | 394 | 7.06e-17 | 83.6 |
Msa0214820 | AT1G11330.3 | 25.513 | 341 | 207 | 13 | 93 | 404 | 84 | 406 | 7.37e-17 | 83.6 |
Msa0214820 | AT1G11330.2 | 25.513 | 341 | 207 | 13 | 93 | 404 | 84 | 406 | 9.42e-17 | 83.2 |
Msa0214820 | AT1G11330.1 | 25.513 | 341 | 207 | 13 | 93 | 404 | 84 | 406 | 1.06e-16 | 83.2 |
Msa0214820 | AT4G11900.10 | 25.057 | 435 | 224 | 24 | 63 | 432 | 49 | 446 | 5.03e-16 | 80.9 |
Msa0214820 | AT4G11900.5 | 25.057 | 435 | 224 | 24 | 63 | 432 | 49 | 446 | 5.03e-16 | 80.9 |
Msa0214820 | AT4G11900.2 | 24.943 | 437 | 226 | 24 | 63 | 434 | 49 | 448 | 6.66e-16 | 80.5 |
Msa0214820 | AT4G11900.3 | 24.943 | 437 | 226 | 24 | 63 | 434 | 49 | 448 | 6.66e-16 | 80.5 |
Msa0214820 | AT4G11900.1 | 24.943 | 437 | 226 | 24 | 63 | 434 | 49 | 448 | 6.97e-16 | 80.5 |
Msa0214820 | AT4G11900.7 | 24.943 | 437 | 226 | 24 | 63 | 434 | 49 | 448 | 7.56e-16 | 80.5 |
Msa0214820 | AT4G11900.6 | 24.943 | 437 | 226 | 24 | 63 | 434 | 49 | 448 | 7.79e-16 | 80.5 |
Msa0214820 | AT4G11900.4 | 24.943 | 437 | 226 | 24 | 63 | 434 | 49 | 448 | 7.79e-16 | 80.5 |
Msa0214820 | AT1G65790.3 | 27.410 | 332 | 194 | 15 | 92 | 400 | 78 | 385 | 1.13e-15 | 79.7 |
Msa0214820 | AT1G65790.2 | 27.410 | 332 | 194 | 15 | 92 | 400 | 78 | 385 | 1.13e-15 | 79.7 |
Msa0214820 | AT3G51710.1 | 21.574 | 343 | 223 | 9 | 102 | 434 | 103 | 409 | 1.14e-15 | 79.3 |
Msa0214820 | AT1G65790.1 | 27.410 | 332 | 194 | 15 | 92 | 400 | 78 | 385 | 1.48e-15 | 79.7 |
Msa0214820 | AT4G11900.8 | 25.879 | 398 | 209 | 22 | 93 | 434 | 12 | 379 | 2.33e-15 | 79.0 |
Msa0214820 | AT4G11900.9 | 25.879 | 398 | 209 | 22 | 93 | 434 | 12 | 379 | 2.89e-15 | 78.6 |
Msa0214820 | AT2G19130.1 | 22.687 | 454 | 278 | 21 | 10 | 430 | 3 | 416 | 5.22e-15 | 77.8 |
Msa0214820 | AT5G03700.1 | 24.625 | 333 | 206 | 14 | 113 | 432 | 109 | 409 | 6.82e-15 | 77.0 |
Msa0214820 | AT1G61360.1 | 24.633 | 341 | 202 | 14 | 93 | 402 | 69 | 385 | 1.00e-14 | 77.0 |
Msa0214820 | AT2G41890.1 | 26.032 | 315 | 199 | 11 | 103 | 405 | 91 | 383 | 5.95e-14 | 74.7 |
Msa0214820 | AT1G61390.1 | 24.118 | 340 | 205 | 15 | 93 | 402 | 91 | 407 | 6.20e-14 | 74.7 |
Msa0214820 | AT1G61420.2 | 25.882 | 340 | 193 | 16 | 93 | 402 | 73 | 383 | 6.53e-13 | 71.2 |
Msa0214820 | AT1G61420.4 | 25.882 | 340 | 193 | 16 | 93 | 402 | 73 | 383 | 6.53e-13 | 71.2 |
Msa0214820 | AT1G61420.1 | 25.882 | 340 | 193 | 16 | 93 | 402 | 73 | 383 | 7.32e-13 | 71.2 |
Msa0214820 | AT4G27290.1 | 23.256 | 430 | 246 | 18 | 9 | 400 | 4 | 387 | 1.84e-12 | 69.7 |
Msa0214820 | AT4G27290.2 | 23.256 | 430 | 246 | 18 | 9 | 400 | 4 | 387 | 1.90e-12 | 69.7 |
Msa0214820 | AT1G34300.1 | 25.260 | 289 | 174 | 12 | 60 | 342 | 46 | 298 | 2.23e-12 | 69.7 |
Msa0214820 | AT1G11280.5 | 23.881 | 335 | 211 | 13 | 93 | 402 | 77 | 392 | 2.41e-12 | 69.3 |
Msa0214820 | AT1G11280.3 | 23.881 | 335 | 211 | 13 | 93 | 402 | 77 | 392 | 2.67e-12 | 69.3 |
Msa0214820 | AT1G11280.4 | 24.332 | 337 | 207 | 14 | 93 | 402 | 87 | 402 | 2.74e-12 | 69.3 |
Msa0214820 | AT1G65800.2 | 36.667 | 150 | 83 | 6 | 63 | 203 | 51 | 197 | 2.85e-12 | 68.9 |
Msa0214820 | AT1G11280.2 | 23.881 | 335 | 211 | 13 | 93 | 402 | 77 | 392 | 2.86e-12 | 69.3 |
Msa0214820 | AT1G11280.1 | 23.881 | 335 | 211 | 13 | 93 | 402 | 87 | 402 | 3.09e-12 | 69.3 |
Msa0214820 | AT1G65800.1 | 41.322 | 121 | 61 | 5 | 92 | 203 | 78 | 197 | 4.43e-12 | 68.6 |
Msa0214820 | AT1G11300.1 | 21.829 | 339 | 209 | 12 | 93 | 399 | 77 | 391 | 4.89e-12 | 68.6 |
Msa0214820 | AT1G11300.2 | 21.829 | 339 | 209 | 12 | 93 | 399 | 77 | 391 | 4.99e-12 | 68.6 |
Msa0214820 | AT1G61610.2 | 25.199 | 377 | 220 | 18 | 60 | 400 | 48 | 398 | 8.26e-12 | 67.8 |
Msa0214820 | AT1G61480.1 | 25.519 | 337 | 198 | 17 | 93 | 402 | 73 | 383 | 8.69e-12 | 67.8 |
Msa0214820 | AT1G61610.1 | 25.199 | 377 | 220 | 18 | 60 | 400 | 48 | 398 | 8.76e-12 | 67.8 |
Msa0214820 | AT1G61360.2 | 23.547 | 327 | 196 | 13 | 106 | 402 | 2 | 304 | 1.45e-11 | 67.0 |
Msa0214820 | AT1G61360.3 | 23.547 | 327 | 196 | 13 | 106 | 402 | 2 | 304 | 1.45e-11 | 67.0 |
Msa0214820 | AT1G61360.4 | 23.547 | 327 | 196 | 13 | 106 | 402 | 2 | 304 | 1.45e-11 | 67.0 |
Find 76 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGGTTGATCAATATTTAA+AGG | 0.189297 | 2_1:+59440383 | Msa0214820:CDS |
ACCTTCAAATTTGTCAATTC+AGG | 0.207413 | 2_1:+59439976 | Msa0214820:CDS |
CCTATTGGAATTCATCTAAT+TGG | 0.210505 | 2_1:+59440535 | Msa0214820:CDS |
CCAGAGAGATGTGCAAAATT+TGG | 0.219021 | 2_1:+59440831 | Msa0214820:CDS |
CACACATGTGGGTTATATTA+AGG | 0.292593 | 2_1:+59441151 | Msa0214820:CDS |
GATCAATATTTAAAGGCTAA+TGG | 0.303903 | 2_1:+59440390 | Msa0214820:CDS |
AAAGGCAACAACACCTATAT+TGG | 0.309987 | 2_1:-59440274 | None:intergenic |
ATAGCACTTTAACATATCTA+AGG | 0.328434 | 2_1:+59440691 | Msa0214820:CDS |
AAGTGTAATGCTAAGCCTTT+AGG | 0.332502 | 2_1:+59440918 | Msa0214820:CDS |
GAGCTAGAGTGAAGGCATTT+GGG | 0.333114 | 2_1:-59440092 | None:intergenic |
CAAACAAACACTTCCAATAT+AGG | 0.347497 | 2_1:+59440261 | Msa0214820:CDS |
ATATAGGTGTTGTTGCCTTT+AGG | 0.351793 | 2_1:+59440277 | Msa0214820:CDS |
AGAGCTAGAGTGAAGGCATT+TGG | 0.354028 | 2_1:-59440093 | None:intergenic |
TAATATAAAGTCAATCCTTT+GGG | 0.364588 | 2_1:-59440483 | None:intergenic |
GGCTTATCTTATTACTTATT+AGG | 0.367191 | 2_1:-59441176 | None:intergenic |
CCAATTAGATGAATTCCAAT+AGG | 0.367562 | 2_1:-59440535 | None:intergenic |
GATGAATTCCAATAGGGAAT+TGG | 0.367962 | 2_1:-59440528 | None:intergenic |
GTAATATAAAGTCAATCCTT+TGG | 0.368875 | 2_1:-59440484 | None:intergenic |
CACCTAGGCCAATTCCCTAT+TGG | 0.373218 | 2_1:+59440520 | Msa0214820:CDS |
ATATCTGATCCATTTGAGAT+TGG | 0.374078 | 2_1:+59440603 | Msa0214820:CDS |
TCATCCTACAGATACTCTTT+TGG | 0.375052 | 2_1:+59440365 | Msa0214820:CDS |
TATCTAAGGCTTGGAATTGA+TGG | 0.375929 | 2_1:+59440705 | Msa0214820:CDS |
GGACCATACATAGTAGAATA+TGG | 0.381946 | 2_1:+59440006 | Msa0214820:CDS |
TGTTGATGGACCTTATAGTT+TGG | 0.383460 | 2_1:+59440452 | Msa0214820:CDS |
ACCTGAATTGACAAATTTGA+AGG | 0.398033 | 2_1:-59439977 | None:intergenic |
CTTGCCTTGCATTCTCCTAA+AGG | 0.398929 | 2_1:-59440933 | None:intergenic |
TTTGTCAATTCAGGTGAACT+TGG | 0.401211 | 2_1:+59439985 | Msa0214820:CDS |
GACCTTCAAAACTTGTTAGT+AGG | 0.402178 | 2_1:+59440412 | Msa0214820:CDS |
GCCTTTAGGTTACTCTCAAA+TGG | 0.414987 | 2_1:+59440291 | Msa0214820:CDS |
GTTAAAGTGCTATTATTAAC+CGG | 0.418173 | 2_1:-59440681 | None:intergenic |
TTTCATTATTACAAAATTGA+AGG | 0.419238 | 2_1:+59440960 | Msa0214820:CDS |
CCCAACACACTTGCAATCCT+TGG | 0.436348 | 2_1:-59441054 | None:intergenic |
TTGATGTACGTGATGGTGTT+TGG | 0.443161 | 2_1:+59440754 | Msa0214820:CDS |
AAGTGCAATCCAATCTCAAA+TGG | 0.453322 | 2_1:-59440612 | None:intergenic |
CCTCCATATTCTACTATGTA+TGG | 0.457838 | 2_1:-59440009 | None:intergenic |
TGGAGAATGGAACATTTGCT+TGG | 0.471864 | 2_1:+59440889 | Msa0214820:CDS |
CCAAGGATTGCAAGTGTGTT+GGG | 0.487333 | 2_1:+59441054 | Msa0214820:CDS |
TATATGAGCAAATACACAAT+TGG | 0.488738 | 2_1:+59440993 | Msa0214820:CDS |
GAACAATAATGTGAGAAAAG+AGG | 0.499200 | 2_1:-59439905 | None:intergenic |
CAATTAGATGAATTCCAATA+GGG | 0.502032 | 2_1:-59440534 | None:intergenic |
TTCACTCTAGCTCTTCGAAT+GGG | 0.502190 | 2_1:+59440102 | Msa0214820:CDS |
TTCAATGCTCCATTCCAAGT+TGG | 0.505787 | 2_1:+59440054 | Msa0214820:CDS |
ACCATTTGAGAGTAACCTAA+AGG | 0.511899 | 2_1:-59440292 | None:intergenic |
ATGCTGATGGAAGAATTGTT+TGG | 0.528512 | 2_1:+59440238 | Msa0214820:CDS |
CTTGTGTTGGCTAATGCTGA+TGG | 0.532407 | 2_1:+59440225 | Msa0214820:CDS |
ACTTTAACATATCTAAGGCT+TGG | 0.532931 | 2_1:+59440696 | Msa0214820:CDS |
ATGATCTTAATTGATACTAA+AGG | 0.538143 | 2_1:+59440318 | Msa0214820:CDS |
GTGAGAATAGTCAATGTGTT+GGG | 0.539127 | 2_1:+59440859 | Msa0214820:CDS |
TTCCAATAGGGAATTGGCCT+AGG | 0.540750 | 2_1:-59440522 | None:intergenic |
ACAAGGATAACTCAAGGTGT+TGG | 0.543138 | 2_1:+59441087 | Msa0214820:CDS |
TTGTAGAAACCAACTTGGAA+TGG | 0.552949 | 2_1:-59440063 | None:intergenic |
AGCTAGAGTGAAGGCATTTG+GGG | 0.572876 | 2_1:-59440091 | None:intergenic |
TATTTGCTTCCCAAACCCAC+CGG | 0.574015 | 2_1:-59440149 | None:intergenic |
GATTGCATGAGCAATGAAAG+TGG | 0.577386 | 2_1:-59439938 | None:intergenic |
TCAATGTGTTGGGTGTCCAT+TGG | 0.582436 | 2_1:+59440869 | Msa0214820:CDS |
ACCAAGGATTGCAAGTGTGT+TGG | 0.584572 | 2_1:+59441053 | Msa0214820:CDS |
AAACACCATCACGTACATCA+AGG | 0.590174 | 2_1:-59440752 | None:intergenic |
GTTGGGTGTCCATTGGAGAA+TGG | 0.605398 | 2_1:+59440876 | Msa0214820:CDS |
GCAAATGTTCCATTCTCCAA+TGG | 0.608211 | 2_1:-59440885 | None:intergenic |
CTTCACTCTAGCTCTTCGAA+TGG | 0.609842 | 2_1:+59440101 | Msa0214820:CDS |
TGTGAGAATAGTCAATGTGT+TGG | 0.612820 | 2_1:+59440858 | Msa0214820:CDS |
AGTTCAAAATACCACACATG+TGG | 0.615945 | 2_1:+59441139 | Msa0214820:CDS |
TGGGTTTGGGAAGCAAATAG+AGG | 0.619163 | 2_1:+59440153 | Msa0214820:CDS |
TGTTGGGTATTTCTATCACA+AGG | 0.623786 | 2_1:+59441070 | Msa0214820:CDS |
TAAGCCTTTAGGAGAATGCA+AGG | 0.627583 | 2_1:+59440929 | Msa0214820:CDS |
TGTTGATGGAAATCTTGTGT+TGG | 0.627952 | 2_1:+59440212 | Msa0214820:CDS |
TATTTCCTTGATGTACGTGA+TGG | 0.628431 | 2_1:+59440747 | Msa0214820:CDS |
TCGAATGGGACTTCAACGAT+CGG | 0.632353 | 2_1:+59440116 | Msa0214820:CDS |
TAGTGTTGTAGAAACCAACT+TGG | 0.633624 | 2_1:-59440068 | None:intergenic |
TCTATCACAAGGATAACTCA+AGG | 0.646783 | 2_1:+59441081 | Msa0214820:CDS |
TCAACCAAAAGAGTATCTGT+AGG | 0.653995 | 2_1:-59440369 | None:intergenic |
CTTAATATAACCCACATGTG+TGG | 0.657492 | 2_1:-59441150 | None:intergenic |
CATTCGAAGAGCTAGAGTGA+AGG | 0.676387 | 2_1:-59440100 | None:intergenic |
GTTCAAAATACCACACATGT+GGG | 0.700853 | 2_1:+59441140 | Msa0214820:CDS |
AAAGTAAGTGAAGATGCATG+TGG | 0.701814 | 2_1:+59441020 | Msa0214820:CDS |
CCATACATAGTAGAATATGG+AGG | 0.706710 | 2_1:+59440009 | Msa0214820:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTCATTATTACAAAATTGA+AGG | + | chr2_1:59440960-59440979 | Msa0214820:CDS | 15.0% |
!! | TTTCATTATTACAAAATTGA+AGG | + | chr2_1:59440960-59440979 | Msa0214820:CDS | 15.0% |
!! | ATGATCTTAATTGATACTAA+AGG | + | chr2_1:59440318-59440337 | Msa0214820:CDS | 20.0% |
!!! | ATACTAAAGGTAATTTTGTT+TGG | + | chr2_1:59440331-59440350 | Msa0214820:CDS | 20.0% |
!! | TTTGGTTGATCAATATTTAA+AGG | + | chr2_1:59440383-59440402 | Msa0214820:CDS | 20.0% |
!! | TAATATAAAGTCAATCCTTT+GGG | - | chr2_1:59440486-59440505 | None:intergenic | 20.0% |
!! | ATGATCTTAATTGATACTAA+AGG | + | chr2_1:59440318-59440337 | Msa0214820:CDS | 20.0% |
!!! | ATACTAAAGGTAATTTTGTT+TGG | + | chr2_1:59440331-59440350 | Msa0214820:CDS | 20.0% |
!! | TTTGGTTGATCAATATTTAA+AGG | + | chr2_1:59440383-59440402 | Msa0214820:CDS | 20.0% |
!! | TAATATAAAGTCAATCCTTT+GGG | - | chr2_1:59440486-59440505 | None:intergenic | 20.0% |
!! | AATTTGAAGGTTTCATTTTG+TGG | - | chr2_1:59439967-59439986 | None:intergenic | 25.0% |
!!! | GAAAATGCAACTTTTTCATT+AGG | + | chr2_1:59440189-59440208 | Msa0214820:CDS | 25.0% |
! | GATCAATATTTAAAGGCTAA+TGG | + | chr2_1:59440390-59440409 | Msa0214820:CDS | 25.0% |
! | TCAGAAAAAGAAAATGTTGA+TGG | + | chr2_1:59440438-59440457 | Msa0214820:CDS | 25.0% |
! | GTAATATAAAGTCAATCCTT+TGG | - | chr2_1:59440487-59440506 | None:intergenic | 25.0% |
! | ACAAAAGTAAAAATTCACCT+AGG | + | chr2_1:59440505-59440524 | Msa0214820:CDS | 25.0% |
! | CAATTAGATGAATTCCAATA+GGG | - | chr2_1:59440537-59440556 | None:intergenic | 25.0% |
!! | GTTAAAGTGCTATTATTAAC+CGG | - | chr2_1:59440684-59440703 | None:intergenic | 25.0% |
! | ATAGCACTTTAACATATCTA+AGG | + | chr2_1:59440691-59440710 | Msa0214820:CDS | 25.0% |
! | TATATGAGCAAATACACAAT+TGG | + | chr2_1:59440993-59441012 | Msa0214820:CDS | 25.0% |
!! | AATTTGAAGGTTTCATTTTG+TGG | - | chr2_1:59439967-59439986 | None:intergenic | 25.0% |
!!! | GAAAATGCAACTTTTTCATT+AGG | + | chr2_1:59440189-59440208 | Msa0214820:CDS | 25.0% |
! | GATCAATATTTAAAGGCTAA+TGG | + | chr2_1:59440390-59440409 | Msa0214820:CDS | 25.0% |
! | TCAGAAAAAGAAAATGTTGA+TGG | + | chr2_1:59440438-59440457 | Msa0214820:CDS | 25.0% |
! | GTAATATAAAGTCAATCCTT+TGG | - | chr2_1:59440487-59440506 | None:intergenic | 25.0% |
! | ACAAAAGTAAAAATTCACCT+AGG | + | chr2_1:59440505-59440524 | Msa0214820:CDS | 25.0% |
! | CAATTAGATGAATTCCAATA+GGG | - | chr2_1:59440537-59440556 | None:intergenic | 25.0% |
!! | GTTAAAGTGCTATTATTAAC+CGG | - | chr2_1:59440684-59440703 | None:intergenic | 25.0% |
! | ATAGCACTTTAACATATCTA+AGG | + | chr2_1:59440691-59440710 | Msa0214820:CDS | 25.0% |
! | TATATGAGCAAATACACAAT+TGG | + | chr2_1:59440993-59441012 | Msa0214820:CDS | 25.0% |
! | ATGTGAGAAAAGAGGTTTTT+AGG | - | chr2_1:59439900-59439919 | None:intergenic | 30.0% |
GAACAATAATGTGAGAAAAG+AGG | - | chr2_1:59439908-59439927 | None:intergenic | 30.0% | |
ACCTTCAAATTTGTCAATTC+AGG | + | chr2_1:59439976-59439995 | Msa0214820:CDS | 30.0% | |
ACCTGAATTGACAAATTTGA+AGG | - | chr2_1:59439980-59439999 | None:intergenic | 30.0% | |
! | AAGTTGCATTTTCATCAACT+GGG | - | chr2_1:59440182-59440201 | None:intergenic | 30.0% |
! | AAAGTTGCATTTTCATCAAC+TGG | - | chr2_1:59440183-59440202 | None:intergenic | 30.0% |
!!! | ACTTTTTCATTAGGTGTTGA+TGG | + | chr2_1:59440198-59440217 | Msa0214820:CDS | 30.0% |
CAAACAAACACTTCCAATAT+AGG | + | chr2_1:59440261-59440280 | Msa0214820:CDS | 30.0% | |
GGATCAAAAACCAAACTATA+AGG | - | chr2_1:59440465-59440484 | None:intergenic | 30.0% | |
CCAATTAGATGAATTCCAAT+AGG | - | chr2_1:59440538-59440557 | None:intergenic | 30.0% | |
CCTATTGGAATTCATCTAAT+TGG | + | chr2_1:59440535-59440554 | Msa0214820:CDS | 30.0% | |
! | ATATCTGATCCATTTGAGAT+TGG | + | chr2_1:59440603-59440622 | Msa0214820:CDS | 30.0% |
!!! | TTTTTTCTCAATTTTGCCTC+TGG | + | chr2_1:59440636-59440655 | Msa0214820:CDS | 30.0% |
! | AAAAATTTTCATACCACCAG+AGG | - | chr2_1:59440655-59440674 | None:intergenic | 30.0% |
!!! | TATGAAAATTTTTAGCGAGC+CGG | + | chr2_1:59440662-59440681 | Msa0214820:CDS | 30.0% |
! | ACTTTAACATATCTAAGGCT+TGG | + | chr2_1:59440696-59440715 | Msa0214820:CDS | 30.0% |
ATGTGGAAAAAAATGTACCA+AGG | + | chr2_1:59441037-59441056 | Msa0214820:CDS | 30.0% | |
! | ATGTGAGAAAAGAGGTTTTT+AGG | - | chr2_1:59439900-59439919 | None:intergenic | 30.0% |
GAACAATAATGTGAGAAAAG+AGG | - | chr2_1:59439908-59439927 | None:intergenic | 30.0% | |
ACCTTCAAATTTGTCAATTC+AGG | + | chr2_1:59439976-59439995 | Msa0214820:CDS | 30.0% | |
ACCTGAATTGACAAATTTGA+AGG | - | chr2_1:59439980-59439999 | None:intergenic | 30.0% | |
! | AAGTTGCATTTTCATCAACT+GGG | - | chr2_1:59440182-59440201 | None:intergenic | 30.0% |
! | AAAGTTGCATTTTCATCAAC+TGG | - | chr2_1:59440183-59440202 | None:intergenic | 30.0% |
!!! | ACTTTTTCATTAGGTGTTGA+TGG | + | chr2_1:59440198-59440217 | Msa0214820:CDS | 30.0% |
CAAACAAACACTTCCAATAT+AGG | + | chr2_1:59440261-59440280 | Msa0214820:CDS | 30.0% | |
GGATCAAAAACCAAACTATA+AGG | - | chr2_1:59440465-59440484 | None:intergenic | 30.0% | |
CCAATTAGATGAATTCCAAT+AGG | - | chr2_1:59440538-59440557 | None:intergenic | 30.0% | |
CCTATTGGAATTCATCTAAT+TGG | + | chr2_1:59440535-59440554 | Msa0214820:CDS | 30.0% | |
! | ATATCTGATCCATTTGAGAT+TGG | + | chr2_1:59440603-59440622 | Msa0214820:CDS | 30.0% |
!!! | TTTTTTCTCAATTTTGCCTC+TGG | + | chr2_1:59440636-59440655 | Msa0214820:CDS | 30.0% |
! | AAAAATTTTCATACCACCAG+AGG | - | chr2_1:59440655-59440674 | None:intergenic | 30.0% |
!!! | TATGAAAATTTTTAGCGAGC+CGG | + | chr2_1:59440662-59440681 | Msa0214820:CDS | 30.0% |
! | ACTTTAACATATCTAAGGCT+TGG | + | chr2_1:59440696-59440715 | Msa0214820:CDS | 30.0% |
ATGTGGAAAAAAATGTACCA+AGG | + | chr2_1:59441037-59441056 | Msa0214820:CDS | 30.0% | |
TTTGTCAATTCAGGTGAACT+TGG | + | chr2_1:59439985-59440004 | Msa0214820:CDS | 35.0% | |
GGACCATACATAGTAGAATA+TGG | + | chr2_1:59440006-59440025 | Msa0214820:CDS | 35.0% | |
CCTCCATATTCTACTATGTA+TGG | - | chr2_1:59440012-59440031 | None:intergenic | 35.0% | |
CCATACATAGTAGAATATGG+AGG | + | chr2_1:59440009-59440028 | Msa0214820:CDS | 35.0% | |
TTGTAGAAACCAACTTGGAA+TGG | - | chr2_1:59440066-59440085 | None:intergenic | 35.0% | |
TAGTGTTGTAGAAACCAACT+TGG | - | chr2_1:59440071-59440090 | None:intergenic | 35.0% | |
! | TGTTGATGGAAATCTTGTGT+TGG | + | chr2_1:59440212-59440231 | Msa0214820:CDS | 35.0% |
ATGCTGATGGAAGAATTGTT+TGG | + | chr2_1:59440238-59440257 | Msa0214820:CDS | 35.0% | |
AAAGGCAACAACACCTATAT+TGG | - | chr2_1:59440277-59440296 | None:intergenic | 35.0% | |
!! | ATATAGGTGTTGTTGCCTTT+AGG | + | chr2_1:59440277-59440296 | Msa0214820:CDS | 35.0% |
ACCATTTGAGAGTAACCTAA+AGG | - | chr2_1:59440295-59440314 | None:intergenic | 35.0% | |
! | TCATCCTACAGATACTCTTT+TGG | + | chr2_1:59440365-59440384 | Msa0214820:CDS | 35.0% |
!! | TCAACCAAAAGAGTATCTGT+AGG | - | chr2_1:59440372-59440391 | None:intergenic | 35.0% |
!! | GACCTTCAAAACTTGTTAGT+AGG | + | chr2_1:59440412-59440431 | Msa0214820:CDS | 35.0% |
!! | AGCCTACTAACAAGTTTTGA+AGG | - | chr2_1:59440417-59440436 | None:intergenic | 35.0% |
! | TGTTGATGGACCTTATAGTT+TGG | + | chr2_1:59440452-59440471 | Msa0214820:CDS | 35.0% |
!!! | AGTTTGGTTTTTGATCCCAA+AGG | + | chr2_1:59440468-59440487 | Msa0214820:CDS | 35.0% |
GATGAATTCCAATAGGGAAT+TGG | - | chr2_1:59440531-59440550 | None:intergenic | 35.0% | |
AAGTGCAATCCAATCTCAAA+TGG | - | chr2_1:59440615-59440634 | None:intergenic | 35.0% | |
! | TATCTAAGGCTTGGAATTGA+TGG | + | chr2_1:59440705-59440724 | Msa0214820:CDS | 35.0% |
TATTTCCTTGATGTACGTGA+TGG | + | chr2_1:59440747-59440766 | Msa0214820:CDS | 35.0% | |
TGTGAGAATAGTCAATGTGT+TGG | + | chr2_1:59440858-59440877 | Msa0214820:CDS | 35.0% | |
GTGAGAATAGTCAATGTGTT+GGG | + | chr2_1:59440859-59440878 | Msa0214820:CDS | 35.0% | |
AAGTGTAATGCTAAGCCTTT+AGG | + | chr2_1:59440918-59440937 | Msa0214820:CDS | 35.0% | |
AAAGTAAGTGAAGATGCATG+TGG | + | chr2_1:59441020-59441039 | Msa0214820:CDS | 35.0% | |
! | TGTTGGGTATTTCTATCACA+AGG | + | chr2_1:59441070-59441089 | Msa0214820:CDS | 35.0% |
TCTATCACAAGGATAACTCA+AGG | + | chr2_1:59441081-59441100 | Msa0214820:CDS | 35.0% | |
AGTTCAAAATACCACACATG+TGG | + | chr2_1:59441139-59441158 | Msa0214820:CDS | 35.0% | |
GTTCAAAATACCACACATGT+GGG | + | chr2_1:59441140-59441159 | Msa0214820:CDS | 35.0% | |
CTTAATATAACCCACATGTG+TGG | - | chr2_1:59441153-59441172 | None:intergenic | 35.0% | |
! | CACACATGTGGGTTATATTA+AGG | + | chr2_1:59441151-59441170 | Msa0214820:CDS | 35.0% |
TTTGTCAATTCAGGTGAACT+TGG | + | chr2_1:59439985-59440004 | Msa0214820:CDS | 35.0% | |
GGACCATACATAGTAGAATA+TGG | + | chr2_1:59440006-59440025 | Msa0214820:CDS | 35.0% | |
CCTCCATATTCTACTATGTA+TGG | - | chr2_1:59440012-59440031 | None:intergenic | 35.0% | |
CCATACATAGTAGAATATGG+AGG | + | chr2_1:59440009-59440028 | Msa0214820:CDS | 35.0% | |
TTGTAGAAACCAACTTGGAA+TGG | - | chr2_1:59440066-59440085 | None:intergenic | 35.0% | |
TAGTGTTGTAGAAACCAACT+TGG | - | chr2_1:59440071-59440090 | None:intergenic | 35.0% | |
! | TGTTGATGGAAATCTTGTGT+TGG | + | chr2_1:59440212-59440231 | Msa0214820:CDS | 35.0% |
ATGCTGATGGAAGAATTGTT+TGG | + | chr2_1:59440238-59440257 | Msa0214820:CDS | 35.0% | |
AAAGGCAACAACACCTATAT+TGG | - | chr2_1:59440277-59440296 | None:intergenic | 35.0% | |
!! | ATATAGGTGTTGTTGCCTTT+AGG | + | chr2_1:59440277-59440296 | Msa0214820:CDS | 35.0% |
ACCATTTGAGAGTAACCTAA+AGG | - | chr2_1:59440295-59440314 | None:intergenic | 35.0% | |
! | TCATCCTACAGATACTCTTT+TGG | + | chr2_1:59440365-59440384 | Msa0214820:CDS | 35.0% |
!! | TCAACCAAAAGAGTATCTGT+AGG | - | chr2_1:59440372-59440391 | None:intergenic | 35.0% |
!! | GACCTTCAAAACTTGTTAGT+AGG | + | chr2_1:59440412-59440431 | Msa0214820:CDS | 35.0% |
!! | AGCCTACTAACAAGTTTTGA+AGG | - | chr2_1:59440417-59440436 | None:intergenic | 35.0% |
! | TGTTGATGGACCTTATAGTT+TGG | + | chr2_1:59440452-59440471 | Msa0214820:CDS | 35.0% |
!!! | AGTTTGGTTTTTGATCCCAA+AGG | + | chr2_1:59440468-59440487 | Msa0214820:CDS | 35.0% |
GATGAATTCCAATAGGGAAT+TGG | - | chr2_1:59440531-59440550 | None:intergenic | 35.0% | |
AAGTGCAATCCAATCTCAAA+TGG | - | chr2_1:59440615-59440634 | None:intergenic | 35.0% | |
! | TATCTAAGGCTTGGAATTGA+TGG | + | chr2_1:59440705-59440724 | Msa0214820:CDS | 35.0% |
TATTTCCTTGATGTACGTGA+TGG | + | chr2_1:59440747-59440766 | Msa0214820:CDS | 35.0% | |
TGTGAGAATAGTCAATGTGT+TGG | + | chr2_1:59440858-59440877 | Msa0214820:CDS | 35.0% | |
GTGAGAATAGTCAATGTGTT+GGG | + | chr2_1:59440859-59440878 | Msa0214820:CDS | 35.0% | |
AAGTGTAATGCTAAGCCTTT+AGG | + | chr2_1:59440918-59440937 | Msa0214820:CDS | 35.0% | |
AAAGTAAGTGAAGATGCATG+TGG | + | chr2_1:59441020-59441039 | Msa0214820:CDS | 35.0% | |
! | TGTTGGGTATTTCTATCACA+AGG | + | chr2_1:59441070-59441089 | Msa0214820:CDS | 35.0% |
TCTATCACAAGGATAACTCA+AGG | + | chr2_1:59441081-59441100 | Msa0214820:CDS | 35.0% | |
AGTTCAAAATACCACACATG+TGG | + | chr2_1:59441139-59441158 | Msa0214820:CDS | 35.0% | |
GTTCAAAATACCACACATGT+GGG | + | chr2_1:59441140-59441159 | Msa0214820:CDS | 35.0% | |
CTTAATATAACCCACATGTG+TGG | - | chr2_1:59441153-59441172 | None:intergenic | 35.0% | |
! | CACACATGTGGGTTATATTA+AGG | + | chr2_1:59441151-59441170 | Msa0214820:CDS | 35.0% |
GATTGCATGAGCAATGAAAG+TGG | - | chr2_1:59439941-59439960 | None:intergenic | 40.0% | |
TTCAATGCTCCATTCCAAGT+TGG | + | chr2_1:59440054-59440073 | Msa0214820:CDS | 40.0% | |
!! | TTCACTCTAGCTCTTCGAAT+GGG | + | chr2_1:59440102-59440121 | Msa0214820:CDS | 40.0% |
! | GCCTTTAGGTTACTCTCAAA+TGG | + | chr2_1:59440291-59440310 | Msa0214820:CDS | 40.0% |
! | TTTCTCAATTTTGCCTCTGG+TGG | + | chr2_1:59440639-59440658 | Msa0214820:CDS | 40.0% |
AAACACCATCACGTACATCA+AGG | - | chr2_1:59440755-59440774 | None:intergenic | 40.0% | |
! | TTGATGTACGTGATGGTGTT+TGG | + | chr2_1:59440754-59440773 | Msa0214820:CDS | 40.0% |
! | CCAAATTTTGCACATCTCTC+TGG | - | chr2_1:59440834-59440853 | None:intergenic | 40.0% |
CCAGAGAGATGTGCAAAATT+TGG | + | chr2_1:59440831-59440850 | Msa0214820:CDS | 40.0% | |
GCAAATGTTCCATTCTCCAA+TGG | - | chr2_1:59440888-59440907 | None:intergenic | 40.0% | |
TGGAGAATGGAACATTTGCT+TGG | + | chr2_1:59440889-59440908 | Msa0214820:CDS | 40.0% | |
! | TAAGCCTTTAGGAGAATGCA+AGG | + | chr2_1:59440929-59440948 | Msa0214820:CDS | 40.0% |
ACAAGGATAACTCAAGGTGT+TGG | + | chr2_1:59441087-59441106 | Msa0214820:CDS | 40.0% | |
GATTGCATGAGCAATGAAAG+TGG | - | chr2_1:59439941-59439960 | None:intergenic | 40.0% | |
TTCAATGCTCCATTCCAAGT+TGG | + | chr2_1:59440054-59440073 | Msa0214820:CDS | 40.0% | |
!! | TTCACTCTAGCTCTTCGAAT+GGG | + | chr2_1:59440102-59440121 | Msa0214820:CDS | 40.0% |
! | GCCTTTAGGTTACTCTCAAA+TGG | + | chr2_1:59440291-59440310 | Msa0214820:CDS | 40.0% |
! | TTTCTCAATTTTGCCTCTGG+TGG | + | chr2_1:59440639-59440658 | Msa0214820:CDS | 40.0% |
AAACACCATCACGTACATCA+AGG | - | chr2_1:59440755-59440774 | None:intergenic | 40.0% | |
! | TTGATGTACGTGATGGTGTT+TGG | + | chr2_1:59440754-59440773 | Msa0214820:CDS | 40.0% |
! | CCAAATTTTGCACATCTCTC+TGG | - | chr2_1:59440834-59440853 | None:intergenic | 40.0% |
CCAGAGAGATGTGCAAAATT+TGG | + | chr2_1:59440831-59440850 | Msa0214820:CDS | 40.0% | |
GCAAATGTTCCATTCTCCAA+TGG | - | chr2_1:59440888-59440907 | None:intergenic | 40.0% | |
TGGAGAATGGAACATTTGCT+TGG | + | chr2_1:59440889-59440908 | Msa0214820:CDS | 40.0% | |
! | TAAGCCTTTAGGAGAATGCA+AGG | + | chr2_1:59440929-59440948 | Msa0214820:CDS | 40.0% |
ACAAGGATAACTCAAGGTGT+TGG | + | chr2_1:59441087-59441106 | Msa0214820:CDS | 40.0% | |
!! | AGCTAGAGTGAAGGCATTTG+GGG | - | chr2_1:59440094-59440113 | None:intergenic | 45.0% |
!! | GAGCTAGAGTGAAGGCATTT+GGG | - | chr2_1:59440095-59440114 | None:intergenic | 45.0% |
!! | AGAGCTAGAGTGAAGGCATT+TGG | - | chr2_1:59440096-59440115 | None:intergenic | 45.0% |
CATTCGAAGAGCTAGAGTGA+AGG | - | chr2_1:59440103-59440122 | None:intergenic | 45.0% | |
!! | CTTCACTCTAGCTCTTCGAA+TGG | + | chr2_1:59440101-59440120 | Msa0214820:CDS | 45.0% |
TCGAATGGGACTTCAACGAT+CGG | + | chr2_1:59440116-59440135 | Msa0214820:CDS | 45.0% | |
TATTTGCTTCCCAAACCCAC+CGG | - | chr2_1:59440152-59440171 | None:intergenic | 45.0% | |
TGGGTTTGGGAAGCAAATAG+AGG | + | chr2_1:59440153-59440172 | Msa0214820:CDS | 45.0% | |
!! | CTTGTGTTGGCTAATGCTGA+TGG | + | chr2_1:59440225-59440244 | Msa0214820:CDS | 45.0% |
! | TTCCAATAGGGAATTGGCCT+AGG | - | chr2_1:59440525-59440544 | None:intergenic | 45.0% |
TCAATGTGTTGGGTGTCCAT+TGG | + | chr2_1:59440869-59440888 | Msa0214820:CDS | 45.0% | |
CTTGCCTTGCATTCTCCTAA+AGG | - | chr2_1:59440936-59440955 | None:intergenic | 45.0% | |
ACCAAGGATTGCAAGTGTGT+TGG | + | chr2_1:59441053-59441072 | Msa0214820:CDS | 45.0% | |
CCAAGGATTGCAAGTGTGTT+GGG | + | chr2_1:59441054-59441073 | Msa0214820:CDS | 45.0% | |
!! | AGCTAGAGTGAAGGCATTTG+GGG | - | chr2_1:59440094-59440113 | None:intergenic | 45.0% |
!! | GAGCTAGAGTGAAGGCATTT+GGG | - | chr2_1:59440095-59440114 | None:intergenic | 45.0% |
!! | AGAGCTAGAGTGAAGGCATT+TGG | - | chr2_1:59440096-59440115 | None:intergenic | 45.0% |
CATTCGAAGAGCTAGAGTGA+AGG | - | chr2_1:59440103-59440122 | None:intergenic | 45.0% | |
!! | CTTCACTCTAGCTCTTCGAA+TGG | + | chr2_1:59440101-59440120 | Msa0214820:CDS | 45.0% |
TCGAATGGGACTTCAACGAT+CGG | + | chr2_1:59440116-59440135 | Msa0214820:CDS | 45.0% | |
TATTTGCTTCCCAAACCCAC+CGG | - | chr2_1:59440152-59440171 | None:intergenic | 45.0% | |
TGGGTTTGGGAAGCAAATAG+AGG | + | chr2_1:59440153-59440172 | Msa0214820:CDS | 45.0% | |
!! | CTTGTGTTGGCTAATGCTGA+TGG | + | chr2_1:59440225-59440244 | Msa0214820:CDS | 45.0% |
! | TTCCAATAGGGAATTGGCCT+AGG | - | chr2_1:59440525-59440544 | None:intergenic | 45.0% |
TCAATGTGTTGGGTGTCCAT+TGG | + | chr2_1:59440869-59440888 | Msa0214820:CDS | 45.0% | |
CTTGCCTTGCATTCTCCTAA+AGG | - | chr2_1:59440936-59440955 | None:intergenic | 45.0% | |
ACCAAGGATTGCAAGTGTGT+TGG | + | chr2_1:59441053-59441072 | Msa0214820:CDS | 45.0% | |
CCAAGGATTGCAAGTGTGTT+GGG | + | chr2_1:59441054-59441073 | Msa0214820:CDS | 45.0% | |
! | AACGATCGGAGCAGCTTTTC+CGG | + | chr2_1:59440130-59440149 | Msa0214820:CDS | 50.0% |
CACCTAGGCCAATTCCCTAT+TGG | + | chr2_1:59440520-59440539 | Msa0214820:CDS | 50.0% | |
GTTGGGTGTCCATTGGAGAA+TGG | + | chr2_1:59440876-59440895 | Msa0214820:CDS | 50.0% | |
CCCAACACACTTGCAATCCT+TGG | - | chr2_1:59441057-59441076 | None:intergenic | 50.0% | |
! | AACGATCGGAGCAGCTTTTC+CGG | + | chr2_1:59440130-59440149 | Msa0214820:CDS | 50.0% |
CACCTAGGCCAATTCCCTAT+TGG | + | chr2_1:59440520-59440539 | Msa0214820:CDS | 50.0% | |
GTTGGGTGTCCATTGGAGAA+TGG | + | chr2_1:59440876-59440895 | Msa0214820:CDS | 50.0% | |
CCCAACACACTTGCAATCCT+TGG | - | chr2_1:59441057-59441076 | None:intergenic | 50.0% | |
! | ATCGGAGCAGCTTTTCCGGT+GGG | + | chr2_1:59440134-59440153 | Msa0214820:CDS | 55.0% |
!! | AGCAGCTTTTCCGGTGGGTT+TGG | + | chr2_1:59440139-59440158 | Msa0214820:CDS | 55.0% |
!! | GCAGCTTTTCCGGTGGGTTT+GGG | + | chr2_1:59440140-59440159 | Msa0214820:CDS | 55.0% |
! | ATCGGAGCAGCTTTTCCGGT+GGG | + | chr2_1:59440134-59440153 | Msa0214820:CDS | 55.0% |
!! | AGCAGCTTTTCCGGTGGGTT+TGG | + | chr2_1:59440139-59440158 | Msa0214820:CDS | 55.0% |
!! | GCAGCTTTTCCGGTGGGTTT+GGG | + | chr2_1:59440140-59440159 | Msa0214820:CDS | 55.0% |
! | GATCGGAGCAGCTTTTCCGG+TGG | + | chr2_1:59440133-59440152 | Msa0214820:CDS | 60.0% |
! | GATCGGAGCAGCTTTTCCGG+TGG | + | chr2_1:59440133-59440152 | Msa0214820:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 59439880 | 59441187 | 59439880 | ID=Msa0214820;Name=Msa0214820 |
chr2_1 | mRNA | 59439880 | 59441187 | 59439880 | ID=Msa0214820-mRNA-1;Parent=Msa0214820;Name=Msa0214820-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|-1|0|1|-1|1|1|0|435 |
chr2_1 | exon | 59439880 | 59441187 | 59439880 | ID=Msa0214820-mRNA-1:exon:16399;Parent=Msa0214820-mRNA-1 |
chr2_1 | CDS | 59439880 | 59441187 | 59439880 | ID=Msa0214820-mRNA-1:cds;Parent=Msa0214820-mRNA-1 |
Gene Sequence |
Protein sequence |